View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7765_high_30 (Length: 240)
Name: NF7765_high_30
Description: NF7765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7765_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 12034767 - 12034988
Alignment:
| Q |
1 |
tttctaagaatttgaatcatatcggttgagcactacttgacgcaatcgaattccaagtattattcaggcatcacttggttcttaatgattttatatgttt |
100 |
Q |
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| T |
12034767 |
tttctaagaatttgaatcatatcggttgagcactgcttgacgcaatcgaattccaagtattattcagtcatcacttg-ttcttaatgattttatatgttt |
12034865 |
T |
|
| Q |
101 |
aggaatatataaattgatgtatgtgcttaatgactattaatacaagctttttatacatgatctaggataactgttcggaagacagtaatgttagagatat |
200 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
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| T |
12034866 |
aggaatatagaaattgatgtatgtgcttaatgactattaatacaagctttttatacatgatctaggataaatgttcggaagacagtaacgttagagatat |
12034965 |
T |
|
| Q |
201 |
cgtattatcacaaacttacttaa |
223 |
Q |
| |
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||||| ||||||||||||||||| |
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| T |
12034966 |
cgtatcatcacaaacttacttaa |
12034988 |
T |
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