View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7765_high_37 (Length: 218)
Name: NF7765_high_37
Description: NF7765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7765_high_37 |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 203
Target Start/End: Complemental strand, 50212998 - 50212806
Alignment:
| Q |
11 |
tccaataatatcaagaggagtggtaaaggtacagcaatcgtgtggtttagaaacgatctcagagttttggataatgaaactctctacaaggcttggcttt |
110 |
Q |
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| T |
50212998 |
tccaacaataccaagaggagtggtaaaggtacagcaatcgtgtggtttagaaacgatctcagagttttggataatgaaactctctacaaggcttggcttt |
50212899 |
T |
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| Q |
111 |
cctcacaaactttattgcctgtttactgtattgatcctcggctatttgcaaccacttaccatttcggatttccaaaaactggaggtatattct |
203 |
Q |
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| T |
50212898 |
cctcacaaactttattgcctgtttactgtattgatcctcggctatttgcaaccacttaccatttcggatttccaaaaactggaggtatattct |
50212806 |
T |
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