View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7765_low_24 (Length: 366)
Name: NF7765_low_24
Description: NF7765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7765_low_24 |
 | |
|
| [»] scaffold1207 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 314; Significance: 1e-177; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 2 - 351
Target Start/End: Original strand, 11170588 - 11170937
Alignment:
| Q |
2 |
ggatctccaataatatcgagtttatgctttctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctc |
101 |
Q |
| |
|
||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11170588 |
ggatctccactaatgtcgagtttatgttttctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctc |
11170687 |
T |
|
| Q |
102 |
cattaatggccttaacattgatatcaccattctcaaatgttagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctacatcc |
201 |
Q |
| |
|
| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11170688 |
ctccagtggccttaacattgatatcaccattctcaaatgtgagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctacatcc |
11170787 |
T |
|
| Q |
202 |
atgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11170788 |
atgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatct |
11170887 |
T |
|
| Q |
302 |
cgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataac |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11170888 |
cgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataac |
11170937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 32 - 351
Target Start/End: Original strand, 11209440 - 11209759
Alignment:
| Q |
32 |
ctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctccattaatggccttaacattgatatcaccat |
131 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
11209440 |
ctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcctgcaatagccttaacattgatatcaccat |
11209539 |
T |
|
| Q |
132 |
tctcaaatgttagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagtcaaggccata |
231 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| | ||| |||||| |
|
|
| T |
11209540 |
cctcaaatgtgagaacagacacgtccaaagtaccaccacctaagtcaaatatgaaaacatttctacgtccatgattaaatggtttcatgccaaagccata |
11209639 |
T |
|
| Q |
232 |
tgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtagactggcgttgtgagtcattaaag |
331 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11209640 |
tgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatagcacccgcatctcgagtagactggcgttgtgagtcattaaag |
11209739 |
T |
|
| Q |
332 |
tatgcaggcacagttataac |
351 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
11209740 |
tatgcaggcacagttataac |
11209759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 22 - 351
Target Start/End: Original strand, 11275992 - 11276321
Alignment:
| Q |
22 |
tttatgctttctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctccattaatggccttaacattg |
121 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
11275992 |
tttatgcttcctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcctccaatggccttaacattg |
11276091 |
T |
|
| Q |
122 |
atatcaccattctcaaatgttagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaaatggtttcaagt |
221 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |
|
|
| T |
11276092 |
atatcaccattctcaaaagtgagaacagacacgtccaaagtaccaccacctaagtcaaatatgaaaacatttctacatccatgattaaatggtttcgtgt |
11276191 |
T |
|
| Q |
222 |
caaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtagactggcgttgtga |
321 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| | |||||||| ||| || ||||||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
11276192 |
taaagccatatgcaattgcagctgcagtaggctcatttattattcgcataacgtttaggccagcaatagcacccgcatctcgagtagactggcgctgtga |
11276291 |
T |
|
| Q |
322 |
gtcattaaagtatgcaggcacagttataac |
351 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
11276292 |
gtcattaaagtatgcaggcacagttataac |
11276321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 351
Target Start/End: Original strand, 11196741 - 11197090
Alignment:
| Q |
2 |
ggatctccaataatatcgagtttatgctttctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctc |
101 |
Q |
| |
|
||||||||| |||| |||| ||||| ||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
11196741 |
ggatctccactaatgtcgattttatacttcctcgagaactctttcacaaaatggttcaccattgtattatcaaagtcttgtcccccaaggtgagtgtctc |
11196840 |
T |
|
| Q |
102 |
cattaatggccttaacattgatatcaccattctcaaatgttagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctacatcc |
201 |
Q |
| |
|
| ||| ||||||||||||||| |||| ||||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
11196841 |
ctgcaatcgccttaacattgatagcaccgttctcaaatgtgagaatggacacgtccagagtaccaccacctaaatcaaaaatgaaaacatgtctacatcc |
11196940 |
T |
|
| Q |
202 |
atgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
11196941 |
atgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaataacacccgcatct |
11197040 |
T |
|
| Q |
302 |
cgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataac |
351 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11197041 |
cgagtggactggcgttgtgagtcattaaagtaagcaggcacagttataac |
11197090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 2 - 351
Target Start/End: Original strand, 11199906 - 11200259
Alignment:
| Q |
2 |
ggatctccaataatatcgagtttatgctttctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctc |
101 |
Q |
| |
|
||||||||| |||| |||| ||||| ||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
11199906 |
ggatctccactaatgtcgattttatacttcctcgagaactctttcacaaaatggttcaccattgtattatcaaagtcttgtcccccaaggtgagtgtctc |
11200005 |
T |
|
| Q |
102 |
cattaatggccttaacattgatatcaccattctcaaatgttagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctacatcc |
201 |
Q |
| |
|
| ||| ||||||||||||||| |||||||||||||||| |||| ||||| |||| ||||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
11200006 |
ctgcaatcgccttaacattgatagcaccattctcaaatgtgagaatggacacatccagagtaccaccacctaaataaaaaatgaaaacatttctacatcc |
11200105 |
T |
|
| Q |
202 |
atgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11200106 |
atgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcaaaacattgaggccagcaatagcacccgcatct |
11200205 |
T |
|
| Q |
302 |
cgagtagactgg----cgttgtgagtcattaaagtatgcaggcacagttataac |
351 |
Q |
| |
|
| |||||||||| |||||||| ||||||||||||| ||||||| ||||||| |
|
|
| T |
11200206 |
caagtagactggcgtacgttgtgaatcattaaagtatgtaggcacaattataac |
11200259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 2 - 351
Target Start/End: Original strand, 11156288 - 11156637
Alignment:
| Q |
2 |
ggatctccaataatatcgagtttatgctttctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctc |
101 |
Q |
| |
|
||||||||| |||| |||| ||||| ||| ||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
11156288 |
ggatctccactaatgtcgattttatacttcctcgagaactcattcacaaaatggttcaccattgtattatcaaagtcttgtcccccaaggtgagtgtctc |
11156387 |
T |
|
| Q |
102 |
cattaatggccttaacattgatatcaccattctcaaatgttagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctacatcc |
201 |
Q |
| |
|
| ||| ||||||||||||||| |||| ||||||||||| |||| |||||||||||||||||||| ||||| |||||||||||||||| | ||||||| |
|
|
| T |
11156388 |
ctgcaatcgccttaacattgatagcacctttctcaaatgtgagaatggacacgtccaaagtaccacctcctaaatcaaaaatgaaaacatgtttacatcc |
11156487 |
T |
|
| Q |
202 |
atgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
11156488 |
atgattaaaaggtttcatgtcaagaccatatgcaattgcagctgcagaaggctcattgattattcgcataacattgaggccagcaataacacccgcatct |
11156587 |
T |
|
| Q |
302 |
cgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataac |
351 |
Q |
| |
|
| || |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11156588 |
tgggtggactggcgttgtgagtcattaaagtaagcaggcacagttataac |
11156637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 2 - 351
Target Start/End: Original strand, 11161155 - 11161516
Alignment:
| Q |
2 |
ggatctccaataatatcgagtttatgctttctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctc |
101 |
Q |
| |
|
||||||||| |||| |||| ||||| ||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
11161155 |
ggatctccactaatgtcgattttatacttcctcgagaactctttcacaaaatggttcaccattgtattatcaaagtcttgtcccctaaggtgagtgtctc |
11161254 |
T |
|
| Q |
102 |
cattaatggccttaacattgatatcaccattctcaaatgttagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctacatcc |
201 |
Q |
| |
|
| ||| ||||||||||||||| ||||| |||||||||| |||| ||||||||||||||||||||||||||| | |||||||||||||| | ||||||| |
|
|
| T |
11161255 |
ctgcaatcgccttaacattgatagcaccaatctcaaatgtgagaatagacacgtccaaagtaccaccacctaaataaaaaatgaaaacatgtatacatcc |
11161354 |
T |
|
| Q |
202 |
atgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggc--------tcattgagtattcgcaaaacattgaggccagcaatggcac |
293 |
Q |
| |
|
||||||||| ||||||| |||||| ||||||||||||||| ||||||||||| ||||||| || ||||| |||||| |||||| |||| |||| |
|
|
| T |
11161355 |
atgattaaaaggtttcatgtcaagaccatatgcaattgcatctgcagtaggctagtagagtcattgattactcgcataacattaaggccaacaatagcac |
11161454 |
T |
|
| Q |
294 |
ccgcatctcgagtagactgg----cgttgtgagtcattaaagtatgcaggcacagttataac |
351 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||||| ||||||| ||||||| |
|
|
| T |
11161455 |
ccgcatctcgagtagactggcgtacgttgtgaaacattaaagtatgtaggcacaattataac |
11161516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 110 - 351
Target Start/End: Complemental strand, 11241488 - 11241247
Alignment:
| Q |
110 |
gccttaacattgatatcaccattctcaaatgttagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctacatccatgattaa |
209 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||| |||||||||| ||||||||||||||| || ||||| | ||||| ||||||||||||||||| |
|
|
| T |
11241488 |
gccttaacattgatagcaccattctcaaatgtgagaatggacacgtccagagtaccaccacctaaatcgaaaattagaacatgtctacatccatgattaa |
11241389 |
T |
|
| Q |
210 |
atggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatctcgagtaga |
309 |
Q |
| |
|
| ||||| || ||||||||||||||||||| |||||||||||||| ||| ||||| |||||| |||||||||||||| ||||||||||||||| |||| |
|
|
| T |
11241388 |
gagttttcatgttaaggccatatgcaattgcaactgcagtaggctcagtgattattcacaaaactttgaggccagcaatagcacccgcatctcgaataga |
11241289 |
T |
|
| Q |
310 |
ctggcgttgtgagtcattaaagtatgcaggcacagttataac |
351 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11241288 |
ctggcgttgtgagtcattaaagtaagcaggcacagttataac |
11241247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 3 - 351
Target Start/End: Original strand, 11133013 - 11133361
Alignment:
| Q |
3 |
gatctccaataatatcgagtttatgctttctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
102 |
Q |
| |
|
|||||||| |||| || | ||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
11133013 |
gatctccactaatgtcaattttatgcttcctcaagaactctttcacgaaatggttcaccattgtgttatcaaagtcttgtcccccgaggtgagtatctcc |
11133112 |
T |
|
| Q |
103 |
attaatggccttaacattgatatcaccattctcaaatgttagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctacatcca |
202 |
Q |
| |
|
| | |||| ||| |||| || || || ||||| |||| |||||| ||||| |||||||| ||||| ||||||| ||||||| | || || |
|
|
| T |
11133113 |
agcagtggctttagtggtgattccattcttatcgaatgtgagaatagacacatccaatgtaccacctcctaaatcaaaaacaaaaacatgtttatggtca |
11133212 |
T |
|
| Q |
203 |
tgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatctc |
302 |
Q |
| |
|
|||||||| |||||| |||||| |||||||||||||||||||| |||||||| |||| |||||||| ||| ||||| || ||||| |||| ||||||| |
|
|
| T |
11133213 |
tgattaaacggtttcttgtcaagaccatatgcaattgcagctgctgtaggctcgttgattattcgcataacgttgagacctgcaataacacctgcatctc |
11133312 |
T |
|
| Q |
303 |
gagtagactggcgttgtgagtcattaaagtatgcaggcacagttataac |
351 |
Q |
| |
|
||||| |||||||| |||||||||||||| ||||| ||||||||||| |
|
|
| T |
11133313 |
tagtagcttggcgttgcgagtcattaaagtaagcaggaacagttataac |
11133361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 197
Target Start/End: Complemental strand, 11314848 - 11314688
Alignment:
| Q |
37 |
gaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctccattaatggccttaacattgatatcaccattctca |
136 |
Q |
| |
|
|||| ||| |||||||| |||||||||| ||||| |||||||||||||| |||||||||||||| || |||| |||| ||||| ||||||||||| |
|
|
| T |
11314848 |
gaacacttccacaaaatatttcaccattgtattattgaagtcttgtcccccaaggtgagtgtctccgccaacggccctaactttgatggcaccattctca |
11314749 |
T |
|
| Q |
137 |
aatgttagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctac |
197 |
Q |
| |
|
| ||| |||| |||||| ||||||||||| ||||| || || || |||||||||||||||| |
|
|
| T |
11314748 |
agtgtgagaatagacacatccaaagtaccgccacccaaatcgaagatgaaaacatttctac |
11314688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 11241572 - 11241511
Alignment:
| Q |
2 |
ggatctccaataatatcgagtttatgctttctcaagaactctttcacaaaatggttcaccat |
63 |
Q |
| |
|
||||||| | |||| |||| ||||| ||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
11241572 |
ggatctctactaatgtcgattttatacttcctcgagaactctttcacaaaatggttcaccat |
11241511 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1207 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: scaffold1207
Description:
Target: scaffold1207; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 2 - 351
Target Start/End: Original strand, 906 - 1252
Alignment:
| Q |
2 |
ggatctccaataatatcgagtttatgctttctcaagaactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctc |
101 |
Q |
| |
|
||||||||| |||| |||| ||||| ||| || |||||| ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||| |
|
|
| T |
906 |
ggatctccactaatgtcgattttatacttccttaagaacactttcacaaaatggttcaccattgcgttatcaaagtcttgccccctgaggtgagtgtctc |
1005 |
T |
|
| Q |
102 |
cattaatggccttaacattgatatcaccattctcaaatgttagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctacatcc |
201 |
Q |
| |
|
| ||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
1006 |
ctacaatagccttaacattgatatcaccattctcaaatttgagaacagacacgtccaaagtaccaccacctaagtcaaaaatgaaaacatttctatgtcc |
1105 |
T |
|
| Q |
202 |
atgattaaatggtttcaagtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |
|
|
| T |
1106 |
atg---tgatggttttgtgtcaaagccatatgcaattgcagctgcagtaggctcattgagtattcccaaaacattgaggccagcaatagcacctgcatct |
1202 |
T |
|
| Q |
302 |
cgagtagactggcgttgtgagtcattaaagtatgcaggcacagttataac |
351 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1203 |
cgagtagattggcgttgtgagtcattaaagtatgcaggcacagttataac |
1252 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 8602213 - 8602291
Alignment:
| Q |
223 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| ||| |||| |||||||| |||||||||||||| |||||| |
|
|
| T |
8602213 |
aaggccatatgcaagagcagctgcagttggctcattgattatccgcattacattgagaccagcaatggcaccagcatct |
8602291 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 8382805 - 8382727
Alignment:
| Q |
223 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
|||||||||||||| ||||| ||||| |||||||||| ||| |||| ||||||||||||||||| ||||| |||||| |
|
|
| T |
8382805 |
aaggccatatgcaagagcagcggcagttggctcattgattatccgcattacattgaggccagcaatcgcaccagcatct |
8382727 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 8585638 - 8585558
Alignment:
| Q |
220 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatc |
300 |
Q |
| |
|
|||||||||||||||||| || || ||||| || ||||||| ||| | || |||||| ||||||||||||||||| ||||| |
|
|
| T |
8585638 |
gtcaaggccatatgcaatagctgcagcagtgggttcattgattatcctcataacattaaggccagcaatggcaccagcatc |
8585558 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 299
Target Start/End: Original strand, 8628768 - 8628847
Alignment:
| Q |
220 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcat |
299 |
Q |
| |
|
|||||||||||||||||| || || ||||| || ||||||| ||| | || |||||| ||||||||||||||||| |||| |
|
|
| T |
8628768 |
gtcaaggccatatgcaatagctgcagcagtggggtcattgattatcctcataacattaaggccagcaatggcaccagcat |
8628847 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 27830807 - 27830733
Alignment:
| Q |
220 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacc |
294 |
Q |
| |
|
|||||||||||||||||| || || ||||||||||| | | ||| |||| |||||| ||||||||||||||||| |
|
|
| T |
27830807 |
gtcaaggccatatgcaatagctgcagcagtaggctcgcttattatccgcataacattaaggccagcaatggcacc |
27830733 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 8654686 - 8654767
Alignment:
| Q |
220 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||||||| || | || || || |||||||||||||| |||||| |
|
|
| T |
8654686 |
gtcaaggccatatgcaatagctgcggcagtaggttcattgagtatccgaatgacgttaagtccagcaatggcaccagcatct |
8654767 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 13333388 - 13333307
Alignment:
| Q |
220 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| |||||| | | ||| ||||||||||| ||||| |||||| |
|
|
| T |
13333388 |
gtcaaggccatatgcaatagctgcagcagtaggttcattgattattcgaatgatattaaggccagcaatagcaccagcatct |
13333307 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 301
Target Start/End: Original strand, 6789749 - 6789829
Alignment:
| Q |
221 |
tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
|||||||||||||||| ||||| || || || ||||||| |||||| | |||||| || |||||||||||||| |||||| |
|
|
| T |
6789749 |
tcaaggccatatgcaagagcagcagctgttggttcattgattattcgtataacattaagaccagcaatggcaccagcatct |
6789829 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 10494306 - 10494226
Alignment:
| Q |
220 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatc |
300 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| ||| || | ||||| ||||||||||| ||||| ||||| |
|
|
| T |
10494306 |
gtcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagcaccagcatc |
10494226 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 8538275 - 8538353
Alignment:
| Q |
223 |
aaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
|||||| ||||||| ||||| || ||||| ||||||| ||| |||| |||||||||||||||||| |||| |||||| |
|
|
| T |
8538275 |
aaggccgtatgcaagagcagcagctgtaggttcattgattatccgcattacattgaggccagcaatgacaccagcatct |
8538353 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Complemental strand, 29577594 - 29577533
Alignment:
| Q |
227 |
ccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaat |
288 |
Q |
| |
|
|||||||||| |||||| ||||| || ||||||| ||| |||| ||||||||||||||||| |
|
|
| T |
29577594 |
ccatatgcaagtgcagcagcagttggttcattgattatccgcattacattgaggccagcaat |
29577533 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 300
Target Start/End: Complemental strand, 16661924 - 16661844
Alignment:
| Q |
220 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatc |
300 |
Q |
| |
|
|||||||||||||||||| || |||||||| || ||||||| ||| | || ||| || ||||||||||||||||| ||||| |
|
|
| T |
16661924 |
gtcaaggccatatgcaatagctgctgcagtgggttcattgattatcctcacaacgttaaggccagcaatggcaccagcatc |
16661844 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 220 - 301
Target Start/End: Original strand, 7542462 - 7542543
Alignment:
| Q |
220 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
||||||||||||||||| || || |||||||| ||||| | | | || ||||||||||||||||||||||||||||||| |
|
|
| T |
7542462 |
gtcaaggccatatgcaacagctgcggcagtaggttcattcattgccctcataacattgaggccagcaatggcacccgcatct |
7542543 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 16657449 - 16657368
Alignment:
| Q |
220 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
|||||| ||||||||||| || || |||||||| ||||||| ||||| | ||||| |||||||| |||||||| |||||| |
|
|
| T |
16657449 |
gtcaagaccatatgcaatagctgcagcagtaggttcattgataattcgaatgacattaaggccagcgatggcaccagcatct |
16657368 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 30775489 - 30775568
Alignment:
| Q |
221 |
tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatc |
300 |
Q |
| |
|
||||| ||||||||||| || |||||||| |||||||| | ||||| || |||||| || |||||||||||||| ||||| |
|
|
| T |
30775489 |
tcaagtccatatgcaatagctgctgcagtgggctcattaattattctcataacattaagaccagcaatggcaccagcatc |
30775568 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 301
Target Start/End: Complemental strand, 9335822 - 9335742
Alignment:
| Q |
221 |
tcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaatggcacccgcatct |
301 |
Q |
| |
|
||||||||||||||||| || || |||||||| ||||||| ||| || | ||||| ||||||||||| | ||| |||||| |
|
|
| T |
9335822 |
tcaaggccatatgcaatagctgcagcagtaggttcattgattatccgaatgacattaaggccagcaatagtaccagcatct |
9335742 |
T |
|
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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 12528558 - 12528622
Alignment:
| Q |
38 |
aactctttcacaaaatggttcaccattgcattatcaaagtcttgtcccccgaggtgagtgtctcc |
102 |
Q |
| |
|
|||||||||||||| || ||||||||| |||||||||||| | ||| || |||||||||||||| |
|
|
| T |
12528558 |
aactctttcacaaagtgattcaccattcgattatcaaagtcctctcctccaaggtgagtgtctcc |
12528622 |
T |
|
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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 34466725 - 34466657
Alignment:
| Q |
220 |
gtcaaggccatatgcaattgcagctgcagtaggctcattgagtattcgcaaaacattgaggccagcaat |
288 |
Q |
| |
|
|||||| ||||||||||| || || ||||| || ||||||| |||| |||||||||| ||||||||||| |
|
|
| T |
34466725 |
gtcaagtccatatgcaatagctgcagcagtgggttcattgattatttgcaaaacattaaggccagcaat |
34466657 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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