View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7765_low_29 (Length: 313)
Name: NF7765_low_29
Description: NF7765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7765_low_29 |
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Alignment Details
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 15 - 302
Target Start/End: Original strand, 22035451 - 22035738
Alignment:
| Q |
15 |
ttatctagtgttttttcaaatatattgtcttgttaatttttctttatttcttatttctcacatgaatctaatcagtttgcatatgtaagctggtgttaaa |
114 |
Q |
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|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
22035451 |
ttatatagtgttttttcaattatattgtcttgttaatttttctttatttcttatttctcacatgaatctaatcagtttgtatatgtaagctggtgttaaa |
22035550 |
T |
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| Q |
115 |
agaaaaatgaatctatgtgaaattgagaaagcttcctatgacaaaatcagttatcatggaaccttatgttattaggagaaatctcattgatgttgcacaa |
214 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |
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| T |
22035551 |
agaaaaatgaatctatgtaaaattgagaaagcttcctatgacaaaatcagttatcatggaactttatgttattaggagaaatctcaatgattttgcacaa |
22035650 |
T |
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| Q |
215 |
gatcactactacagtatcataaaatttagatatatgagtgggggtgaattgattctaaggccatttttcttagactctgtatagtatt |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
22035651 |
gatcactactacagtatcataaaatttagatatatgagtgggggtgaattgattctaaggccatttttcttagattctgtatagtatt |
22035738 |
T |
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