View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7765_low_34 (Length: 298)

Name: NF7765_low_34
Description: NF7765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7765_low_34
NF7765_low_34
[»] chr3 (56 HSPs)
chr3 (1-200)||(55059391-55059590)
chr3 (222-281)||(55059676-55059735)
chr3 (51-118)||(4775355-4775422)
chr3 (145-197)||(1020978-1021030)
chr3 (145-197)||(26849927-26849979)
chr3 (145-197)||(29491666-29491718)
chr3 (145-197)||(35137438-35137490)
chr3 (145-197)||(40477760-40477812)
chr3 (145-197)||(50257802-50257854)
chr3 (145-197)||(50412424-50412476)
chr3 (145-197)||(51756443-51756494)
chr3 (150-197)||(32636629-32636676)
chr3 (145-200)||(34825282-34825337)
chr3 (154-196)||(5528704-5528746)
chr3 (145-197)||(29389049-29389101)
chr3 (145-197)||(35500794-35500846)
chr3 (145-197)||(42622201-42622253)
chr3 (145-197)||(46507704-46507756)
chr3 (145-197)||(46671340-46671392)
chr3 (145-197)||(50247227-50247279)
chr3 (145-197)||(53289584-53289636)
chr3 (145-200)||(1129480-1129535)
chr3 (155-197)||(7862154-7862196)
chr3 (145-191)||(47745836-47745882)
chr3 (77-138)||(1093175-1093236)
chr3 (160-197)||(14654149-14654186)
chr3 (156-197)||(15996823-15996864)
chr3 (71-143)||(37915405-37915478)
chr3 (157-194)||(45538650-45538687)
chr3 (145-197)||(13756662-13756714)
chr3 (145-197)||(26012554-26012606)
chr3 (145-197)||(40784901-40784953)
chr3 (145-197)||(41217054-41217106)
chr3 (145-197)||(43745699-43745751)
chr3 (145-197)||(44653178-44653230)
chr3 (150-197)||(7352524-7352571)
chr3 (155-197)||(4577635-4577677)
chr3 (155-197)||(5532407-5532448)
chr3 (155-197)||(8433440-8433482)
chr3 (155-197)||(23795791-23795833)
chr3 (155-197)||(25482605-25482647)
chr3 (155-197)||(26885333-26885375)
chr3 (155-197)||(29806020-29806062)
chr3 (155-197)||(37359865-37359907)
chr3 (155-197)||(38296892-38296933)
chr3 (156-197)||(16136985-16137026)
chr3 (156-197)||(40021082-40021123)
chr3 (156-197)||(42478690-42478731)
chr3 (155-200)||(52776815-52776859)
chr3 (145-197)||(24169958-24170010)
chr3 (145-197)||(33006302-33006354)
chr3 (145-197)||(40727700-40727752)
chr3 (145-189)||(41981994-41982038)
chr3 (96-136)||(53232985-53233025)
chr3 (145-197)||(54428498-54428550)
chr3 (145-197)||(54788359-54788411)
[»] chr7 (33 HSPs)
chr7 (46-139)||(43447541-43447635)
chr7 (145-197)||(41968774-41968826)
chr7 (145-197)||(5583215-5583267)
chr7 (145-197)||(6791789-6791841)
chr7 (145-197)||(24953280-24953332)
chr7 (145-197)||(35357704-35357756)
chr7 (145-197)||(47369571-47369623)
chr7 (155-197)||(43631411-43631453)
chr7 (155-200)||(1806481-1806526)
chr7 (156-197)||(31346658-31346699)
chr7 (152-197)||(36533406-36533451)
chr7 (145-198)||(46291451-46291504)
chr7 (145-197)||(15715907-15715959)
chr7 (145-197)||(16087292-16087344)
chr7 (145-197)||(18519917-18519969)
chr7 (145-197)||(24812082-24812134)
chr7 (145-197)||(28265105-28265157)
chr7 (145-197)||(30891281-30891333)
chr7 (145-197)||(35291678-35291730)
chr7 (145-197)||(47642500-47642552)
chr7 (154-197)||(41771769-41771812)
chr7 (155-196)||(2290794-2290835)
chr7 (152-197)||(15954134-15954179)
chr7 (145-197)||(23110782-23110834)
chr7 (77-137)||(48714785-48714845)
chr7 (158-197)||(17306964-17307003)
chr7 (162-197)||(26605423-26605458)
chr7 (155-197)||(27130905-27130947)
chr7 (155-197)||(27897583-27897624)
chr7 (155-197)||(39558608-39558650)
chr7 (155-197)||(41742584-41742626)
chr7 (145-197)||(30076662-30076714)
chr7 (155-191)||(45232411-45232447)
[»] chr6 (14 HSPs)
chr6 (145-197)||(3141391-3141443)
chr6 (145-197)||(4509433-4509485)
chr6 (145-197)||(8549906-8549958)
chr6 (155-197)||(9661755-9661797)
chr6 (145-197)||(1244818-1244870)
chr6 (153-197)||(22755244-22755288)
chr6 (151-197)||(23416497-23416543)
chr6 (145-197)||(4576388-4576440)
chr6 (145-197)||(9686779-9686831)
chr6 (145-197)||(33574522-33574574)
chr6 (154-197)||(13719114-13719157)
chr6 (155-197)||(29023970-29024012)
chr6 (152-197)||(8310225-8310270)
chr6 (145-197)||(14778912-14778967)
[»] chr5 (32 HSPs)
chr5 (145-197)||(33210373-33210425)
chr5 (145-200)||(42486957-42487012)
chr5 (152-197)||(32993685-32993730)
chr5 (152-197)||(36339205-36339250)
chr5 (145-197)||(9910394-9910446)
chr5 (145-197)||(13118804-13118856)
chr5 (145-197)||(29959882-29959934)
chr5 (145-197)||(33678158-33678210)
chr5 (152-197)||(4616703-4616748)
chr5 (145-197)||(8258395-8258447)
chr5 (145-197)||(9604784-9604836)
chr5 (145-197)||(9629909-9629961)
chr5 (53-136)||(38486978-38487062)
chr5 (84-139)||(29630392-29630447)
chr5 (156-197)||(36428270-36428311)
chr5 (145-197)||(701944-701996)
chr5 (44-100)||(1896100-1896156)
chr5 (145-197)||(2851693-2851745)
chr5 (145-197)||(9913530-9913582)
chr5 (145-197)||(13126983-13127035)
chr5 (145-197)||(25929563-25929615)
chr5 (145-197)||(28318702-28318754)
chr5 (145-197)||(40803322-40803374)
chr5 (91-142)||(41610213-41610264)
chr5 (44-118)||(1895407-1895480)
chr5 (155-197)||(10401055-10401097)
chr5 (155-200)||(4366790-4366834)
chr5 (155-200)||(38355078-38355123)
chr5 (145-197)||(480026-480078)
chr5 (68-136)||(25593370-25593438)
chr5 (145-197)||(27979016-27979068)
chr5 (145-197)||(40563472-40563524)
[»] chr4 (38 HSPs)
chr4 (145-197)||(3763118-3763170)
chr4 (145-197)||(48647373-48647425)
chr4 (145-200)||(23059121-23059176)
chr4 (154-197)||(27761761-27761804)
chr4 (65-146)||(11380964-11381045)
chr4 (152-197)||(27990898-27990943)
chr4 (145-197)||(12356765-12356817)
chr4 (145-197)||(45692976-45693028)
chr4 (155-197)||(53936874-53936916)
chr4 (145-194)||(38008159-38008208)
chr4 (145-197)||(24980293-24980345)
chr4 (145-197)||(42177692-42177744)
chr4 (145-197)||(50383681-50383733)
chr4 (145-197)||(50607687-50607739)
chr4 (145-197)||(54996100-54996152)
chr4 (145-197)||(56104753-56104805)
chr4 (150-197)||(582771-582818)
chr4 (151-197)||(1856804-1856850)
chr4 (155-197)||(33491523-33491565)
chr4 (155-197)||(33491957-33491999)
chr4 (147-197)||(50732864-50732914)
chr4 (145-197)||(30348516-30348567)
chr4 (145-197)||(32289257-32289309)
chr4 (155-197)||(352834-352876)
chr4 (155-197)||(27736944-27736986)
chr4 (155-197)||(31998729-31998771)
chr4 (155-197)||(56302836-56302878)
chr4 (155-200)||(23639597-23639642)
chr4 (155-200)||(23645255-23645300)
chr4 (152-197)||(32846012-32846057)
chr4 (164-197)||(43363330-43363363)
chr4 (155-200)||(46631008-46631053)
chr4 (152-197)||(54506231-54506276)
chr4 (145-197)||(126585-126637)
chr4 (145-197)||(4720491-4720543)
chr4 (145-197)||(24535837-24535889)
chr4 (153-197)||(29581970-29582013)
chr4 (153-197)||(36631394-36631438)
[»] chr1 (48 HSPs)
chr1 (145-197)||(17554169-17554221)
chr1 (145-197)||(24381319-24381371)
chr1 (145-197)||(32710096-32710148)
chr1 (155-197)||(51056200-51056242)
chr1 (145-197)||(477786-477838)
chr1 (145-197)||(38260805-38260857)
chr1 (145-197)||(46234831-46234883)
chr1 (150-197)||(6526785-6526832)
chr1 (155-197)||(31075972-31076014)
chr1 (65-139)||(51097516-51097590)
chr1 (156-197)||(30571009-30571050)
chr1 (145-197)||(34038516-34038568)
chr1 (145-197)||(35874290-35874342)
chr1 (145-197)||(47544298-47544350)
chr1 (145-197)||(48977228-48977280)
chr1 (145-197)||(52180237-52180289)
chr1 (145-197)||(52861649-52861701)
chr1 (158-197)||(3399151-3399190)
chr1 (150-197)||(10348382-10348429)
chr1 (150-197)||(30321248-30321295)
chr1 (155-197)||(7489311-7489353)
chr1 (155-197)||(25082111-25082153)
chr1 (155-197)||(51787830-51787872)
chr1 (152-197)||(24003779-24003824)
chr1 (156-197)||(47693209-47693250)
chr1 (145-197)||(12105511-12105563)
chr1 (145-197)||(14153034-14153086)
chr1 (145-197)||(25702809-25702861)
chr1 (145-197)||(45622836-45622888)
chr1 (145-197)||(52345953-52346005)
chr1 (162-197)||(30263951-30263986)
chr1 (154-197)||(35534233-35534275)
chr1 (150-197)||(45767686-45767733)
chr1 (155-197)||(13216458-13216499)
chr1 (74-136)||(14389733-14389795)
chr1 (155-197)||(24230932-24230974)
chr1 (155-197)||(24511591-24511633)
chr1 (155-197)||(26308564-26308606)
chr1 (155-197)||(41568448-41568489)
chr1 (155-197)||(44382378-44382420)
chr1 (155-197)||(46281945-46281986)
chr1 (155-197)||(51610885-51610927)
chr1 (164-197)||(44263649-44263682)
chr1 (155-200)||(50631955-50631999)
chr1 (145-197)||(6965935-6965987)
chr1 (145-197)||(12907282-12907334)
chr1 (156-200)||(34101068-34101112)
chr1 (145-197)||(38717757-38717809)
[»] scaffold0308 (1 HSPs)
scaffold0308 (145-197)||(7213-7265)
[»] scaffold0184 (1 HSPs)
scaffold0184 (145-197)||(16934-16986)
[»] scaffold0078 (1 HSPs)
scaffold0078 (145-197)||(55858-55910)
[»] chr8 (24 HSPs)
chr8 (145-197)||(117812-117864)
chr8 (145-197)||(27847512-27847564)
chr8 (145-197)||(29454561-29454613)
chr8 (145-197)||(37676289-37676341)
chr8 (156-197)||(38329839-38329880)
chr8 (145-197)||(1043061-1043113)
chr8 (145-197)||(2261032-2261084)
chr8 (145-197)||(4214847-4214899)
chr8 (145-197)||(26522318-26522370)
chr8 (145-197)||(34633866-34633918)
chr8 (145-197)||(40267480-40267532)
chr8 (158-197)||(6631270-6631309)
chr8 (156-197)||(2749669-2749710)
chr8 (155-200)||(24377309-24377354)
chr8 (152-197)||(26988746-26988791)
chr8 (152-197)||(43842202-43842247)
chr8 (145-197)||(36667236-36667288)
chr8 (145-197)||(41720250-41720302)
chr8 (53-136)||(45107946-45108030)
chr8 (145-200)||(40776970-40777025)
chr8 (156-197)||(36162193-36162234)
chr8 (155-200)||(36835342-36835387)
chr8 (165-197)||(10706920-10706952)
chr8 (95-138)||(20105075-20105119)
[»] chr2 (26 HSPs)
chr2 (145-197)||(1580593-1580645)
chr2 (145-197)||(40947115-40947167)
chr2 (145-197)||(45157533-45157585)
chr2 (145-197)||(4740230-4740282)
chr2 (145-197)||(6945343-6945395)
chr2 (145-197)||(7673651-7673703)
chr2 (145-197)||(9589116-9589168)
chr2 (145-197)||(17451636-17451688)
chr2 (145-197)||(18999071-18999123)
chr2 (145-197)||(21404550-21404602)
chr2 (155-197)||(35896774-35896816)
chr2 (145-197)||(3260965-3261017)
chr2 (145-197)||(4049312-4049364)
chr2 (145-197)||(14839809-14839861)
chr2 (145-197)||(39620194-39620246)
chr2 (145-197)||(42849679-42849731)
chr2 (77-144)||(45632406-45632473)
chr2 (155-197)||(4298263-4298305)
chr2 (155-197)||(11088219-11088260)
chr2 (155-197)||(12962027-12962069)
chr2 (155-197)||(28318403-28318444)
chr2 (156-197)||(45264045-45264086)
chr2 (145-197)||(30980883-30980935)
chr2 (145-177)||(32602655-32602687)
chr2 (97-137)||(36926305-36926345)
chr2 (145-197)||(40495468-40495520)
[»] scaffold0775 (1 HSPs)
scaffold0775 (155-197)||(200-242)
[»] scaffold0432 (1 HSPs)
scaffold0432 (155-197)||(3391-3433)
[»] scaffold0136 (2 HSPs)
scaffold0136 (71-139)||(23708-23777)
scaffold0136 (73-129)||(22918-22974)
[»] scaffold0126 (1 HSPs)
scaffold0126 (44-104)||(34464-34524)


Alignment Details
Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 55059391 - 55059590
Alignment:
Q  1 ggaagaagaagagtaggaggcgcattcaaataaaaagagtagcaagtggaccttttaatctacacctttcattttaatccaaaggtctatatttattcct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55059391 ggaagaagaagagtaggaggcgcattcaaataaaaagagtagcacgtggaccttttaatctacacctttcattttaatccaaaggtctatatttattcct 55059490  T
Q  101 ctcatctctcataataactagtgctctcacttgatatgttctcataaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  55059491 ctcatctctcataataactagtgctctcacttaatatgttctcataaaaagtgagtgtaccggtacactcaaatatattagatgtaccatagaattttcc 55059590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 222 - 281
Target Start/End: Original strand, 55059676 - 55059735
Alignment:
Q  222 accttttcataataatagtaataaagcaaaacctgaaattccaaaaacaatataaaataa 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55059676 accttttcataataatagtaataaagcaaaacctgaaattccaaaaacaatataaaataa 55059735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 4775422 - 4775355
Alignment:
Q  51 ccttttaatctacacctttcattttaatccaaaggtctatatttattcctctcatctctcataataac 118  Q
    ||||||||||| |||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  4775422 ccttttaatcttcaccttccattttaatccaatggtccatatttattcctctcacctctcataataac 4775355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 1021030 - 1020978
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  1021030 taaaaagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaattt 1020978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 26849979 - 26849927
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||||||||    
T  26849979 taaaaagtgagtgtaccgatacactcaaatataatgggtgtaccatagaattt 26849927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 29491718 - 29491666
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  29491718 taaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaattt 29491666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 35137490 - 35137438
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  35137490 taaaaagtgagtgtaccggtgcactcaaatatagtgggtgtaccatagaattt 35137438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 40477812 - 40477760
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  40477812 taaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaattt 40477760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 50257854 - 50257802
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  50257854 taaagagtgagtgtaccgatacactcaaatatagtaggtgtaccatagaattt 50257802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 50412424 - 50412476
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||| | |||||||||||||||||||||||| |||||||||||||||||    
T  50412424 taaaaagtaaatgtaccggtacactcaaatatattgggtgtaccatagaattt 50412476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 51756443 - 51756494
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  51756443 taaaaagtgagtgtac-ggtacactcaaatatattgggtgtaccatagaattt 51756494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 32636676 - 32636629
Alignment:
Q  150 agtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  32636676 agtgagtgtatcggtacactcaaatatattgggtgtaccatagaattt 32636629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 34825337 - 34825282
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  34825337 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatataattttcc 34825282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 5528746 - 5528704
Alignment:
Q  154 agtgtaccggtacactcaaatatattaggtgtaccatagaatt 196  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  5528746 agtgtaccggtacactcaaatatgttaggtgtaccatagaatt 5528704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 29389049 - 29389101
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | | |||||||||||||||    
T  29389049 taaagagtgagtgtaccggtacactcaaatatagtggatgtaccatagaattt 29389101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 35500846 - 35500794
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||||| |||||||||||| | |||||||||||||||||    
T  35500846 taaagagtgagtgtaccggtgcactcaaatatagtgggtgtaccatagaattt 35500794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 42622201 - 42622253
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  42622201 taaagagtgggtgtaccggtacactcaaatatattgggtgtaccataaaattt 42622253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 46507704 - 46507756
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||| |||||||||||||||||||| | |||||||||||||||||    
T  46507704 taaagagtgagtttaccggtacactcaaatatagtgggtgtaccatagaattt 46507756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 46671392 - 46671340
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||||| |||||||| || |||||    
T  46671392 taaagagtgagtgtaccggtacactcaaatatattgggtgtaccgtataattt 46671340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 50247279 - 50247227
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||| ||||||    
T  50247279 taaagagtgggtgtaccggtacactcaaatatattgggtgtaccatggaattt 50247227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 53289584 - 53289636
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||| |||||||||||||||| | |||||||||||||||||    
T  53289584 taaagagtgagtgtacaggtacactcaaatatagtgggtgtaccatagaattt 53289636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 1129480 - 1129535
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||| |||| |||||||||||||||||||| ||||  |||||||||||||||||||    
T  1129480 taaagagtgggtgtaccggtacactcaaatgtattgagtgtaccatagaattttcc 1129535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 7862196 - 7862154
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||| ||||||||||||||||||||||||| |||||    
T  7862196 gtgtaccggtatactcaaatatattaggtgtaccataaaattt 7862154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 47745882 - 47745836
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccata 191  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||||    
T  47745882 taaagagtgagtgcaccggtacactcaaatatattgggtgtaccata 47745836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 1093236 - 1093175
Alignment:
Q  77 atccaaaggtctatatttattcctctcatctctcataataactagtgctctcacttgatatg 138  Q
    |||||| |||||| ||| ||||||||||||||||||  |||||| | |||||||||||||||    
T  1093236 atccaacggtctaaattaattcctctcatctctcattgtaactactcctctcacttgatatg 1093175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 14654149 - 14654186
Alignment:
Q  160 ccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||| |||||||||||||||||    
T  14654149 ccggtacactcaaatatattgggtgtaccatagaattt 14654186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 15996864 - 15996823
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||| ||||||||| |||||||||||||||||    
T  15996864 tgtaccggtacacttaaatatattgggtgtaccatagaattt 15996823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 37915478 - 37915405
Alignment:
Q  71 attttaatccaaaggtctatatttattcctctcatc-tctcataataactagtgctctcacttgatatgttctc 143  Q
    ||||| |||||| |||||| ||| |||||||||||| |||||| ||||||| | ||||||||||||||| ||||    
T  37915478 attttgatccaatggtctagattaattcctctcatcctctcattataactactcctctcacttgatatggtctc 37915405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 45538687 - 45538650
Alignment:
Q  157 gtaccggtacactcaaatatattaggtgtaccatagaa 194  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  45538687 gtaccggtacactcaaatatattgggtgtaccatagaa 45538650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 13756662 - 13756714
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||| ||||||||||||||||| | |||||| ||||||||||    
T  13756662 taaagagtgagtgtatcggtacactcaaatatagtgggtgtaacatagaattt 13756714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 26012554 - 26012606
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||| ||||||||||||||| | | |||||||||||||||    
T  26012554 taaagagtgagtgtaccagtacactcaaatatagtggatgtaccatagaattt 26012606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 40784901 - 40784953
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||| ||||||| |||||||||||||||||  |||||||||||||||    
T  40784901 taaagagtgaatgtaccgatacactcaaatatattatatgtaccatagaattt 40784953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 41217106 - 41217054
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||| ||| || ||||||||||||||||| | |||||||||||||||||    
T  41217106 taaaaagtaagtatatcggtacactcaaatatagtgggtgtaccatagaattt 41217054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 43745699 - 43745751
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||| |||||||||||||  ||||||||||||||||    
T  43745699 taaagagtgggtgtaccggtatactcaaatatattgagtgtaccatagaattt 43745751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 44653230 - 44653178
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||| | ||||| ||||||||||| ||||||||||||||||||||||    
T  44653230 taaagagtgactataccgatacactcaaatgtattaggtgtaccatagaattt 44653178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 7352524 - 7352571
Alignment:
Q  150 agtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||| |||||||||||||| | | |||||||||||||||    
T  7352524 agtgagtgtaccgatacactcaaatatagtggatgtaccatagaattt 7352571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 4577635 - 4577677
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  4577635 gtgtaccggtacactcaaatatgttgggtgtaccgtagaattt 4577677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 5532407 - 5532448
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  5532407 gtgtaccggtacactcaaatat-ttagatgtaccatagaattt 5532448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 8433482 - 8433440
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  8433482 gtgtaccggtacactcaaatatgttgggtgtaccgtagaattt 8433440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 23795833 - 23795791
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||| |||||||||||||||||||||||| ||| |||||    
T  23795833 gtgtaccgatacactcaaatatattaggtgtacgataaaattt 23795791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 25482605 - 25482647
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||| ||||||||||||||||||||||||| || |||||    
T  25482605 gtgtaccgatacactcaaatatattaggtgtaccttataattt 25482647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 26885333 - 26885375
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||| |||||||||||||||| ||||||||||| |||||    
T  26885333 gtgtaccgatacactcaaatatattgggtgtaccataaaattt 26885375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 29806062 - 29806020
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||    
T  29806062 gtgtaccggtgcactcaaatatgttaggtgtaccgtagaattt 29806020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 37359865 - 37359907
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  37359865 gtgtaccggtacactcaaatatgttgggtgtaccgtagaattt 37359907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 38296933 - 38296892
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||| |||||||||||||||| ||||||||||||||||||||    
T  38296933 gtgtatcggtacactcaaatat-ttaggtgtaccatagaattt 38296892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 16136985 - 16137026
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||| |||||||||||||||| | |||||||||||||||    
T  16136985 tgtaccgatacactcaaatatattggatgtaccatagaattt 16137026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 40021123 - 40021082
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||| ||||||||||||||||| | |||||||||||||||    
T  40021123 tgtaccagtacactcaaatatattggatgtaccatagaattt 40021082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 42478731 - 42478690
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||||||||| ||||||||||| |||||    
T  42478731 tgtatcggtacactcaaatatattgggtgtaccatataattt 42478690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 52776815 - 52776859
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||    
T  52776815 gtgtaccggtacactcaaat-tattgggtgtacgatagaattttcc 52776859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 24170010 - 24169958
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| |||||||| |||||||||||||| | ||||||||||| |||||    
T  24170010 taaagagtgggtgtaccgatacactcaaatatactgggtgtaccataaaattt 24169958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 33006354 - 33006302
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||| ||||||| ||||||||||||| ||| |||||| |||| |||||    
T  33006354 taaaaagtgggtgtacctgtacactcaaatacattgggtgtagcataaaattt 33006302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 40727700 - 40727752
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| |||||||||||||||||||||||||  |||||| ||| |||||    
T  40727700 taaagagtgtgtgtaccggtacactcaaatatattgagtgtacaataaaattt 40727752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 41982038 - 41981994
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtacca 189  Q
    ||||||| |||||||||| |||||||||||||||||  |||||||    
T  41982038 taaaaagcgagtgtaccgatacactcaaatatattatatgtacca 41981994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 53232985 - 53233025
Alignment:
Q  96 ttcctctcatctctcataataactagtgctctcacttgata 136  Q
    |||||||||||||||| |||||||| | |||||||||||||    
T  53232985 ttcctctcatctctcacaataactactcctctcacttgata 53233025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 54428550 - 54428498
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| |||||| |||||||||||||||| | | |||||||||||||||    
T  54428550 taaagagtgggtgtacaggtacactcaaatataatggatgtaccatagaattt 54428498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 54788411 - 54788359
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||| ||||||||||||||||||| | ||||||||| |||||    
T  54788411 taaagagtgggtgtatcggtacactcaaatatatttgatgtaccatacaattt 54788359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 139
Target Start/End: Complemental strand, 43447635 - 43447541
Alignment:
Q  46 gtggaccttttaatctacacc-tttcattttaatccaaaggtctatatttattcctctcatctctcataataactagtgctctcacttgatatgt 139  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  43447635 gtggaccttttaatctaccccctttcattttaatccaaaggtctatatttattcctctcatatctcataataactagtgctcttacttgatatgt 43447541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 41968774 - 41968826
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41968774 taaagagtgagtgtaccgatacactcaaatatattaggtgtaccatagaattt 41968826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 5583215 - 5583267
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  5583215 taaagagtgagtttaccggtacactcaaatatattgggtgtaccatagaattt 5583267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 6791789 - 6791841
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  6791789 taaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaattt 6791841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 24953280 - 24953332
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  24953280 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaattt 24953332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 35357756 - 35357704
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  35357756 taaagagtgagtgtaccggtacactcaaatatattggatgtaccatagaattt 35357704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 47369571 - 47369623
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  47369571 taaagagtgagtgtatcggtacactcaaatatattgggtgtaccatagaattt 47369623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 43631411 - 43631453
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  43631411 gtgtaccggtacactcaaatatgttaggtgtaccatagaattt 43631453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 1806526 - 1806481
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  1806526 gtgtaccggtacactcaaatatattgagtgtaccatagaattttcc 1806481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 31346699 - 31346658
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  31346699 tgtaccggtacactcaaatatattaggtgtatcatagaattt 31346658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 36533406 - 36533451
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||    
T  36533406 tgagtgtaccggtacactcaaatatattgggtgtaccatataattt 36533451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 46291451 - 46291504
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaatttt 198  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  46291451 taaagagtgcgtgtaccggtacactcaaatatattgggtgtaccatataatttt 46291504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 15715959 - 15715907
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||| | |||||||||||||||||    
T  15715959 taaagagtgggtgtaccggtacactcaaatatagtgggtgtaccatagaattt 15715907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 16087292 - 16087344
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||  |||||||||||||||||||||| ||||||||||| ||||||||    
T  16087292 taaaaagttggtgtaccggtacactcaaatatgttaggtgtaccgtagaattt 16087344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 18519969 - 18519917
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | | |||||||||||||||    
T  18519969 taaagagtgagtgtaccggtacactcaaatatagtggatgtaccatagaattt 18519917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 24812134 - 24812082
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| |  ||||||||||||||||    
T  24812134 taaagagtgagtgtaccggtacactcaaatatagtgagtgtaccatagaattt 24812082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 28265105 - 28265157
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||||| |||||||||||| | |||||||||||||||||    
T  28265105 taaagagtgagtgtaccggtgcactcaaatatagtgggtgtaccatagaattt 28265157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 30891333 - 30891281
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||| ||||||||||||||||| | |||||||||||||||    
T  30891333 taaagagtgagtgtaccagtacactcaaatatattggatgtaccatagaattt 30891281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 35291678 - 35291730
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||||| |||||  ||||||||||    
T  35291678 taaagagtgagtgtaccggtacactcaaatatattgggtgtgtcatagaattt 35291730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 47642552 - 47642500
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||| |||||    
T  47642552 taaagagtgagtgtaccggtacactcaaatataatgggtgtaccataaaattt 47642500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 41771769 - 41771812
Alignment:
Q  154 agtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||| ||||||||||| |||||    
T  41771769 agtgtaccggtacactcaaatatattgggtgtaccataaaattt 41771812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 2290835 - 2290794
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaatt 196  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  2290835 gtgtaccggtacactcaaatatgttgggtgtaccatagaatt 2290794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 15954179 - 15954134
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||| |||||||||||||||||||||| | |||||||||||||||    
T  15954179 tgagtataccggtacactcaaatatattggatgtaccatagaattt 15954134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 23110782 - 23110834
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | | ||||||||| |||||    
T  23110782 taaagagtgagtgtaccggtacactcaaatatagtggatgtaccataaaattt 23110834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 48714845 - 48714785
Alignment:
Q  77 atccaaaggtctatatttattcctctcatctctcataataactagtgctctcacttgatat 137  Q
    |||||| |||| ||||| |||||||||| ||||||| |||| ||||||||||| |||||||    
T  48714845 atccaatggtcaatattaattcctctcacctctcattataagtagtgctctcatttgatat 48714785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 17306964 - 17307003
Alignment:
Q  158 taccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  17306964 taccgatacactcaaatatattaggtgtaccataaaattt 17307003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 26605423 - 26605458
Alignment:
Q  162 ggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||| |||||||||||||||||    
T  26605423 ggtacactcaaatatattgggtgtaccatagaattt 26605458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 27130905 - 27130947
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||| ||||| |||| |||||||||||||||||    
T  27130905 gtgtaccggtacacccaaatttattgggtgtaccatagaattt 27130947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 27897583 - 27897624
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  27897583 gtgtaccggtacactcaaa-atgttaggtgtaccatagaattt 27897624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 39558650 - 39558608
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||| ||||||| | |||||||||||||||||    
T  39558650 gtgtaccggtacacttaaatatagtgggtgtaccatagaattt 39558608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 41742626 - 41742584
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  41742626 gtgtaccggtacactcaaatatgttgggtgtaccgtagaattt 41742584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 30076714 - 30076662
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||| |||||||  ||||||||||||||| | |||||||||||||||||    
T  30076714 taaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaattt 30076662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 45232411 - 45232447
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccata 191  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  45232411 gtgtaccagtacactcaaatatattgggtgtaccata 45232447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 3141391 - 3141443
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  3141391 taaagagtgagtgtaccggtacactcaaatatagtaggtgtaccatagaattt 3141443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 4509485 - 4509433
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  4509485 taaagagtgggtgtaccggtacactcaaatatattaggtgtaccatagaattt 4509433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 8549906 - 8549958
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  8549906 taaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaattt 8549958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 9661797 - 9661755
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  9661797 gtgtaccggtacactcaaatatattgggtgtaccatagaattt 9661755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 1244870 - 1244818
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | | |||||||||||||||    
T  1244870 taaagagtgagtgtaccggtacactcaaatatagtggatgtaccatagaattt 1244818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 22755288 - 22755244
Alignment:
Q  153 gagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  22755288 gagtgtaccggtacactcaaatatattgggtgtatcatagaattt 22755244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 23416543 - 23416497
Alignment:
Q  151 gtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||    
T  23416543 gtgagtgtactggtacactcaaatatagtgggtgtaccatagaattt 23416497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 4576440 - 4576388
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||| |||||||||||||| ||||||||||| | |||||||||||||||    
T  4576440 taaagagtaagtgtaccggtacattcaaatatattggctgtaccatagaattt 4576388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 9686831 - 9686779
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||| | ||||||||||||||||  ||||||||||||||||    
T  9686831 taaagagtgagtgtactgatacactcaaatatattgagtgtaccatagaattt 9686779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 33574522 - 33574574
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||| ||| |||||||||||||| | |||||||||||||||||    
T  33574522 taaagagtgagtgtgccgatacactcaaatatagtgggtgtaccatagaattt 33574574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 13719157 - 13719114
Alignment:
Q  154 agtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||| || |||||||| ||||||||    
T  13719157 agtgtaccggtacactcaaatatgttgggtgtaccgtagaattt 13719114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 29023970 - 29024012
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  29023970 gtgtaccggtacactcaaatatgttgggtgtaccgtagaattt 29024012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 8310225 - 8310270
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||| ||||||||||||||||||||  | |||||||||||||    
T  8310225 tgagtgtatcggtacactcaaatatattaaatataccatagaattt 8310270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 14778967 - 14778912
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaa---atatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||   ||||||| ||||||||||| |||||    
T  14778967 taaagagtgagtgtaccggtacactcaatatatatattgggtgtaccataaaattt 14778912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 33210425 - 33210373
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  33210425 taaagagtgagtgtaccggtacactcaaatatattgggtgtaccatagaattt 33210373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 42486957 - 42487012
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||    
T  42486957 taaaaagtgggtgtagcggtacactcaaatatattagttgtaccatagaattttcc 42487012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 32993685 - 32993730
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  32993685 tgagtgtaccggtacactcaaatatattgggtgtaccatagaattt 32993730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 36339205 - 36339250
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  36339205 tgagtgtaccggtacactcaaatatattgggtgtaccatagaattt 36339250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 9910394 - 9910446
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  9910394 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaattt 9910446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 13118856 - 13118804
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  13118856 taaagagtgagtgtaccggtacacttaaatatattagatgtaccatagaattt 13118804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 29959934 - 29959882
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  29959934 taaagagtgagtgtactgatacactcaaatatattaggtgtaccatagaattt 29959882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 33678210 - 33678158
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  33678210 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaattt 33678158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 4616748 - 4616703
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||    
T  4616748 tgagtgtaccggtacactcaaatatattagatgtaccatataattt 4616703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 8258447 - 8258395
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||| | |||||||||||||||||    
T  8258447 taaagagtgcgtgtaccggtacactcaaatatagtgggtgtaccatagaattt 8258395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 9604784 - 9604836
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | |||||| ||||||||||    
T  9604784 taaagagtgagtgtaccggtacactcaaatatagtgggtgtatcatagaattt 9604836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 9629961 - 9629909
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  9629961 taaagagttagtgtaacggtacactcaaatatattaagtgtaccatagaattt 9629909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 38487062 - 38486978
Alignment:
Q  53 ttttaatctacacctttcattttaatccaaaggtctatatttattcctctca-tctctcataataactagtgctctcacttgata 136  Q
    |||||||||||||| | ||||||||||||| | |||   |||||||||||||  ||||||| |||| ||||||||||||||||||    
T  38487062 ttttaatctacaccgtacattttaatccaatgatcttcttttattcctctcaccctctcattataaatagtgctctcacttgata 38486978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 139
Target Start/End: Complemental strand, 29630447 - 29630392
Alignment:
Q  84 ggtctatatttattcctctcatctctcataataactagtgctctcacttgatatgt 139  Q
    |||||| ||| |||||||||||||||||| ||||||| | ||||||||||||||||    
T  29630447 ggtctaaattaattcctctcatctctcattataactactcctctcacttgatatgt 29630392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 36428270 - 36428311
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  36428270 tgtaccggtacactcaaatatattggatgtaccatagaattt 36428311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 701996 - 701944
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||  || |||||| |||||||||||||||||||||||||    
T  701996 taaagagtgagtgtacgagtgcactcatatatattaggtgtaccatagaattt 701944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 1896100 - 1896156
Alignment:
Q  44 aagtggaccttttaatctacacctttcattttaatccaaaggtctatatttattcct 100  Q
    ||||||| ||||||||||||||| |||||||  ||| ||||||||||||||| ||||    
T  1896100 aagtggatcttttaatctacaccattcatttagatctaaaggtctatatttactcct 1896156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 2851745 - 2851693
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||| ||||||||||||||||| | |||||||| | ||||||    
T  2851745 taaaaagtgagtgtatcggtacactcaaatatagtgggtgtaccgttgaattt 2851693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 9913530 - 9913582
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||| ||||||||||||||||| | ||||||| |||||||||    
T  9913530 taaagagtgagtgtatcggtacactcaaatataatgggtgtactatagaattt 9913582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 13127035 - 13126983
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||| ||| |||||||||||| ||||||||||| |||||||||||||||    
T  13127035 taaagagtaagtataccggtacacttaaatatattagatgtaccatagaattt 13126983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 25929615 - 25929563
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| || |||| ||||||||||||||||| |||||||||||||||||    
T  25929615 taaagagtgggtatacccgtacactcaaatatattgggtgtaccatagaattt 25929563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 28318702 - 28318754
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||| ||||||||||||||| | ||||||||||| |||||    
T  28318702 taaagagtgagtgtaccagtacactcaaatatagtgggtgtaccataaaattt 28318754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 40803374 - 40803322
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||| ||||||||||||||||| |   |||||||||||||||    
T  40803374 taaaaagtgagtgtatcggtacactcaaatatagtgaatgtaccatagaattt 40803322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 41610213 - 41610264
Alignment:
Q  91 atttattcctctcatctctcataataactagtgctctcacttgatatgttct 142  Q
    ||||||||||||||||||||||| ||| ||||| ||||| || |||||||||    
T  41610213 atttattcctctcatctctcatattaagtagtgttctcatttaatatgttct 41610264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 1895480 - 1895407
Alignment:
Q  44 aagtggaccttttaatctacacctttcattttaatccaaaggtctatatttattcctctcatctctcataataac 118  Q
    ||||||| |||||||||| |||  |||||||  ||| ||||||||||||||| |||||||| |||||| ||||||    
T  1895480 aagtggatcttttaatctgcactattcatttagatctaaaggtctatatttactcctctca-ctctcacaataac 1895407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 10401055 - 10401097
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  10401055 gtgtaccggtacactcaaatatgttgggtgtaccgtagaattt 10401097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 4366834 - 4366790
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||    
T  4366834 gtgtaccggtgcactcaaatgtat-aggtgtaccatagaattttcc 4366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 38355078 - 38355123
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    ||||||| |||||||||||||| ||||||||||| || ||||||||    
T  38355078 gtgtaccagtacactcaaatatgttaggtgtaccgtataattttcc 38355123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 480026 - 480078
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||| |||||||||||||| | | ||||||||| |||||    
T  480026 taaagagtgagtgtaccgatacactcaaatatactggatgtaccataaaattt 480078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 25593438 - 25593370
Alignment:
Q  68 ttcattttaatccaaaggtctatatttattcctctcatctctcataataactagtgctctcacttgata 136  Q
    |||| ||||||| || |||| |||||| ||||||||||||||||  |||| || | |||||||||||||    
T  25593438 ttcaatttaatctaatggtcaatatttgttcctctcatctctcaccataaatactcctctcacttgata 25593370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 27979068 - 27979016
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||| ||||||||| |||||||||||||||| | |||| ||||||||||    
T  27979068 taaagagtaagtgtaccgatacactcaaatatattggatgtatcatagaattt 27979016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 40563472 - 40563524
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||| || ||||||||||||||  |||||||||| |||||    
T  40563472 taaagagtgagtgtaccagtgcactcaaatatattgagtgtaccataaaattt 40563524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 3763170 - 3763118
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  3763170 taaaaagtgagtgtaccgatacactcaaatatattagatgtaccatagaattt 3763118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 48647373 - 48647425
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  48647373 taaagagtgagtgtaccggtacactcaaatatattgggtgtaccatagaattt 48647425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 23059121 - 23059176
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  23059121 taaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaattttcc 23059176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 27761761 - 27761804
Alignment:
Q  154 agtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27761761 agtgtaccggtacactcaaatatattaggtgtaccatagaattt 27761804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 65 - 146
Target Start/End: Original strand, 11380964 - 11381045
Alignment:
Q  65 cctttcattttaatccaaaggtctatatttattcctctcatctctcataataactagtgctctcacttgatatgttctcata 146  Q
    ||||| |||| ||||||| |||| | ||| |||||||||||||||||| ||||||| | |||||||||||||||| ||||||    
T  11380964 cctttgatttaaatccaacggtcgaaattaattcctctcatctctcattataactactcctctcacttgatatgtcctcata 11381045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 27990898 - 27990943
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  27990898 tgagtgtaccggtacactcaaatatagtaggtgtaccatagaattt 27990943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 12356765 - 12356817
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  12356765 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaattt 12356817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 45692976 - 45693028
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  45692976 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaattt 45693028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 53936874 - 53936916
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  53936874 gtgtaccggtacactcaaatatattgggtgtaccatagaattt 53936916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 38008208 - 38008159
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaa 194  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  38008208 taaaaagtgagtgtaccggtacattcaaatatatcgggtgtaccatagaa 38008159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 24980293 - 24980345
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||| ||||||||||||||||||| |||||||||||||||||    
T  24980293 taaagagtgggtgtatcggtacactcaaatatattgggtgtaccatagaattt 24980345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 42177692 - 42177744
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||| |||||| ||||||||||||||| |||||||||||||||||    
T  42177692 taaagagtgagtataccggaacactcaaatatattgggtgtaccatagaattt 42177744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 50383681 - 50383733
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||| |||||    
T  50383681 taaagagtgagtgtaccggtacactcaaatatattggatgtaccatataattt 50383733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 50607739 - 50607687
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  50607739 taaagagtgcgtgtaccggtacactcaaatatattgggtgtaccataaaattt 50607687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 54996152 - 54996100
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||| | |||| |||||||||||||||||||||||||||||||||||    
T  54996152 taaagagtgaatataccagtacactcaaatatattaggtgtaccatagaattt 54996100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 56104753 - 56104805
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||| ||||||||| | |||||||||||||||    
T  56104753 taaagagtgagtgtaccggtacacttaaatatattggatgtaccatagaattt 56104805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 582818 - 582771
Alignment:
Q  150 agtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||||| | ||||||||||| |||||    
T  582818 agtgagtgtaccggtacactcaaatatagtgggtgtaccataaaattt 582771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 1856850 - 1856804
Alignment:
Q  151 gtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||| | | |||||||||||||||||    
T  1856850 gtgagtgtaccggtacactcaaatacagtgggtgtaccatagaattt 1856804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 33491523 - 33491565
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||| | |||||||||||||||    
T  33491523 gtgtaccggtacactcaaatatattggatgtaccatagaattt 33491565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 33491957 - 33491999
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  33491957 gtgtaccggtacactcaaatatattgggtgtaccgtagaattt 33491999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 50732914 - 50732864
Alignment:
Q  147 aaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||| |||||||||||||| | | |||||||||||||||    
T  50732914 aaaagtgagtgtaccgatacactcaaatatagtggatgtaccatagaattt 50732864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 30348516 - 30348567
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||| ||||||||||||||||||||||| |||| |||||    
T  30348516 taaagagtgagtgtaccg-tacactcaaatatattaggtgtatcataaaattt 30348567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 32289257 - 32289309
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||  || |||||||||||||||||||| ||||||||||    
T  32289257 taaagagtgagtgtaccaataaactcaaatatattaggtgtatcatagaattt 32289309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 352834 - 352876
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||| ||||||||| | |||||||||||||||    
T  352834 gtgtaccggtacacttaaatatattggatgtaccatagaattt 352876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 27736944 - 27736986
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  27736944 gtgtaccggtacactcaaatatgttgggtgtaccgtagaattt 27736986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 31998771 - 31998729
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||   |||||||||||||||    
T  31998771 gtgtaccggtacactcaaatatattgattgtaccatagaattt 31998729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 56302878 - 56302836
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||| || ||||||||||| |||||||||||||||||    
T  56302878 gtgtaccggtgcattcaaatatattgggtgtaccatagaattt 56302836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 23639597 - 23639642
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||||||| ||||||||||| |||| | ||||||||||||||||||    
T  23639597 gtgtaccgatacactcaaatttattggatgtaccatagaattttcc 23639642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 23645255 - 23645300
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||||||| ||||||||||| |||| | ||||||||||||||||||    
T  23645255 gtgtaccgatacactcaaatttattggatgtaccatagaattttcc 23645300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 32846012 - 32846057
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||| ||| ||||||||||||||||| | |||||||||||||||    
T  32846012 tgagtggaccagtacactcaaatatattggatgtaccatagaattt 32846057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 43363363 - 43363330
Alignment:
Q  164 tacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||||| |||||    
T  43363363 tacactcaaatatattaggtgtaccataaaattt 43363330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 46631008 - 46631053
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  46631008 gtgtaccgatacacccaaatttattgggtgtaccatagaattttcc 46631053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 54506231 - 54506276
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||| | | |||||| ||||||||    
T  54506231 tgagtgtaccggtacactcaaatatagtggatgtaccgtagaattt 54506276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 126637 - 126585
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||| |||||||||||||||||||||| |  ||||||| ||||||||    
T  126637 taaagagtgaatgtaccggtacactcaaatatagtgagtgtaccgtagaattt 126585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 4720543 - 4720491
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| || |||||||||||||||||||  | |||||||||||||||||    
T  4720543 taaagagtgggtctaccggtacactcaaatatcgtgggtgtaccatagaattt 4720491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 24535837 - 24535889
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||  |||||||||||||||||||| | ||||||||||| |||||    
T  24535837 taaagagtgaggctaccggtacactcaaatatagtgggtgtaccatataattt 24535889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 29582013 - 29581970
Alignment:
Q  153 gagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||| |||||||||||||||| | |||||||||||||||    
T  29582013 gagtgtaccg-tacactcaaatatattggatgtaccatagaattt 29581970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 36631394 - 36631438
Alignment:
Q  153 gagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||| | ||||||||||||||||||||||||  |||||||||    
T  36631394 gagtgtaacagtacactcaaatatattaggtgtattatagaattt 36631438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 17554169 - 17554221
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  17554169 taaagagtgagtgtaccggtacactcaaatatattgggtgtaccatagaattt 17554221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 24381371 - 24381319
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24381371 taaagagtgagtgtaccggtacactcaaatctattaggtgtaccatagaattt 24381319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 32710096 - 32710148
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  32710096 taaaaagtgagtgtaccggtacactcaaatatattggatgtaccatagaattt 32710148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 51056242 - 51056200
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  51056242 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 51056200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 477786 - 477838
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  477786 taaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaattt 477838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 38260857 - 38260805
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||    
T  38260857 taaagagtgggtgtaccggtacactcaaatatattagatgtaccatagaattt 38260805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 46234883 - 46234831
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  46234883 taaagagtgagtgtatcggtacactcaaatatattgggtgtaccatagaattt 46234831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 6526785 - 6526832
Alignment:
Q  150 agtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  6526785 agtgagtgtatcggtacactcaaatatattgggtgtaccatagaattt 6526832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 31075972 - 31076014
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  31075972 gtgtaccggtacactcaaatatattgggtgtaccatagaattt 31076014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 139
Target Start/End: Complemental strand, 51097590 - 51097516
Alignment:
Q  65 cctttcattttaatccaaaggtctatatttattcctctcatctctcataataactagtgctctcacttgatatgt 139  Q
    ||||| |||| ||||||| |||| | ||| |||||||||||||||||| ||||||| | ||||||||||||||||    
T  51097590 cctttgatttaaatccaacggtcgaaattaattcctctcatctctcattataactactcctctcacttgatatgt 51097516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 30571050 - 30571009
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  30571050 tgtaacggtacactcaaatatattaggtgtaccatagaattt 30571009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 34038516 - 34038568
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||  |||||||||||||||| | |||||||||||||||    
T  34038516 taaaaagtgagtgtaccaatacactcaaatatattggatgtaccatagaattt 34038568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 35874290 - 35874342
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||  |||||||||||||||| |||||||||||||||||    
T  35874290 taaagagtgagtgtaccaatacactcaaatatattgggtgtaccatagaattt 35874342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 47544350 - 47544298
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||| |||||||||||||| | |||||||||||||||||    
T  47544350 taaagagtgagtgtaccgttacactcaaatatagtgggtgtaccatagaattt 47544298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 48977228 - 48977280
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| |||||||||||||||||||||||||  ||||||||||||||||    
T  48977228 taaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaattt 48977280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 52180289 - 52180237
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  52180289 taaatagtgggtgtaccggtacactcaaatatattagatgtaccataaaattt 52180237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 52861649 - 52861701
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||| ||||    
T  52861649 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccataggattt 52861701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 197
Target Start/End: Complemental strand, 3399190 - 3399151
Alignment:
Q  158 taccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  3399190 taccggcacactcaaatatattaggtgtaccatagaattt 3399151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 10348382 - 10348429
Alignment:
Q  150 agtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||||| | ||||| |||||||||||    
T  10348382 agtgagtgtaccggtacactcaaatatagtgggtgtcccatagaattt 10348429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 30321248 - 30321295
Alignment:
Q  150 agtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||| |||||||||||||||||||| | |||||||||||||||||    
T  30321248 agtgagtataccggtacactcaaatataatgggtgtaccatagaattt 30321295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 7489311 - 7489353
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  7489311 gtgtatcggtacactcaaatatattgggtgtaccatagaattt 7489353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 25082111 - 25082153
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  25082111 gtgtaccggtacactcaaatatgttaggtgtaccgtagaattt 25082153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 51787830 - 51787872
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||||||| | |||||||||||||||    
T  51787830 gtgtaccggtacactcaaatatattggatgtaccatagaattt 51787872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 24003779 - 24003824
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||| | | |||||||||||||||    
T  24003779 tgagtgtaccggtacactcaaatatagtggatgtaccatagaattt 24003824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 47693250 - 47693209
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  47693250 tgtatcggtacactcaaatatattgggtgtaccatagaattt 47693209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 12105511 - 12105563
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| |||||  |||||||||||||||||| |||||||||||||||||    
T  12105511 taaagagtgggtgtattggtacactcaaatatattgggtgtaccatagaattt 12105563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 14153034 - 14153086
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||| ||||||  |||||||||||||||||  ||||||||||||||||    
T  14153034 taaaaagtgggtgtacatgtacactcaaatatattgagtgtaccatagaattt 14153086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 25702809 - 25702861
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||||||||||||||||||||   ||||| |||||||||    
T  25702809 taaagagtgagtgtaccggtacactcaaatatattgaatgtactatagaattt 25702861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 45622836 - 45622888
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||| |||||||||||||||| | | |||||||||||||||    
T  45622836 taaagagtgagtgtactggtacactcaaatatagtggatgtaccatagaattt 45622888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 52345953 - 52346005
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| |||||| |||||||||||||||||| ||||||| |||||||||    
T  52345953 taaagagtgggtgtactggtacactcaaatatattgggtgtacaatagaattt 52346005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 30263951 - 30263986
Alignment:
Q  162 ggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||| |||||||||||||||||    
T  30263951 ggtacactcaaatatattgggtgtaccatagaattt 30263986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 35534233 - 35534275
Alignment:
Q  154 agtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||| ||||| |||||||||||||||||    
T  35534233 agtgtaccggtacactcaaa-atattgggtgtaccatagaattt 35534275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 45767733 - 45767686
Alignment:
Q  150 agtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||| ||||| |||||||||||||||| | |||||||||||||||    
T  45767733 agtgagtataccgatacactcaaatatattggatgtaccatagaattt 45767686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 13216458 - 13216499
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  13216458 gtgtaccggtacactcaaa-atgttaggtgtaccatagaattt 13216499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 14389795 - 14389733
Alignment:
Q  74 ttaatccaaaggtctatatttattcctctcatctctcataataactagtgctctcacttgata 136  Q
    |||||| || |||| || ||||||||||||||||||||||||||   || |||||||||||||    
T  14389795 ttaatctaatggtcaatttttattcctctcatctctcataataagatgtcctctcacttgata 14389733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 24230932 - 24230974
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||| |||||||||||||||| | |||||||||||||||    
T  24230932 gtgtaccgatacactcaaatatattggatgtaccatagaattt 24230974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 24511633 - 24511591
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  24511633 gtgtaccggtacactcaaatatgttgggtgtaccgtagaattt 24511591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 26308564 - 26308606
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || ||||||| |||||||||    
T  26308564 gtgtaccggtacactcaaatatgttgggtgtacgatagaattt 26308606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 41568489 - 41568448
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  41568489 gtgtaccggtacactcaaa-atattgggtgtaccatagaattt 41568448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 44382378 - 44382420
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || ||||||||||| |||||    
T  44382378 gtgtaccggtacactcaaatatgttgggtgtaccataaaattt 44382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 46281986 - 46281945
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  46281986 gtgtaccggtacactcaaa-atattgggtgtaccatagaattt 46281945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 51610885 - 51610927
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| |||| ||||| |||||||||    
T  51610885 gtgtaccggtacactcaaatatgttagatgtacgatagaattt 51610927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 44263682 - 44263649
Alignment:
Q  164 tacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||| |||||||||||||||||    
T  44263682 tacactcaaatatattgggtgtaccatagaattt 44263649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 50631955 - 50631999
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||||||||||||||||||| |||| |||||||||| |||||||||    
T  50631955 gtgtaccggtacactcaaat-tattgggtgtaccatggaattttcc 50631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 6965987 - 6965935
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||| |||||||  ||||||||||||||| | |||||||||||||||||    
T  6965987 taaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaattt 6965935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 12907334 - 12907282
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||||||||||| |||||| | | | |||||||||||||    
T  12907334 taaatagtgagtgtaccggtacactcgaatatagtggatataccatagaattt 12907282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 34101068 - 34101112
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    ||||||||||||||||||||| || |||||||  |||||||||||    
T  34101068 tgtaccggtacactcaaatatgttgggtgtacggtagaattttcc 34101112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 38717809 - 38717757
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||| |||||||  ||||||||||||||| | |||||||||||||||||    
T  38717809 taaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaattt 38717757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 7265 - 7213
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  7265 taaagagtgagtgtaccggtacactcaaatataatgggtgtaccatagaattt 7213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 16934 - 16986
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  16934 taaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaattt 16986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 55910 - 55858
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  55910 taaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaattt 55858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 117864 - 117812
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  117864 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaattt 117812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 27847564 - 27847512
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  27847564 taaagagtgagtgtatcggtacactcaaatatagtaggtgtaccatagaattt 27847512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 29454561 - 29454613
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  29454561 taaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaattt 29454613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 37676289 - 37676341
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  37676289 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaattt 37676341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 38329839 - 38329880
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  38329839 tgtaccggtacactcaaatatattgggtgtaccatagaattt 38329880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 1043113 - 1043061
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| |||||||| |||||||||||||||| |||||||||||||||||    
T  1043113 taaagagtgggtgtaccgatacactcaaatatattgggtgtaccatagaattt 1043061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 2261084 - 2261032
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| |||||||||||||||||||||||||  ||||||||||||||||    
T  2261084 taaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaattt 2261032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 4214847 - 4214899
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| || |||||||||||||||||||||| |||||||||||||||||    
T  4214847 taaagagtgggtataccggtacactcaaatatattgggtgtaccatagaattt 4214899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 26522318 - 26522370
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||| |||||    
T  26522318 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatataattt 26522370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 34633918 - 34633866
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  34633918 taaagagtgagtgtaccgatacactcaaatatattgggtgtatcatagaattt 34633866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 40267532 - 40267480
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||| | |||||||||||||||||    
T  40267532 taaagagtgggtgtaccggtacactcaaatatagtgggtgtaccatagaattt 40267480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 6631270 - 6631309
Alignment:
Q  158 taccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  6631270 taccggtacactcaaatatattgggtgtaccatagaattt 6631309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 2749669 - 2749710
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||| |||||||||||||||||| |||||||||||||||||    
T  2749669 tgtacaggtacactcaaatatattgggtgtaccatagaattt 2749710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 24377354 - 24377309
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||||||||||||||||||||| || |||||||| |||||||||||    
T  24377354 gtgtaccggtacactcaaatatgttgggtgtaccgtagaattttcc 24377309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 26988746 - 26988791
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||||    
T  26988746 tgagtgtaccgatacactcaaatatattgggtgtaccatataattt 26988791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 43842202 - 43842247
Alignment:
Q  152 tgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||| ||||||||||||||||||||| ||||||||| |||||    
T  43842202 tgagtgtaacggtacactcaaatatattagatgtaccatataattt 43842247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 36667288 - 36667236
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | | ||||||||| |||||    
T  36667288 taaagagtgagtgtaccggtacactcaaatataatggatgtaccatataattt 36667236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 41720302 - 41720250
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| |||||||| |||||||||||||| | |||||||||||||||||    
T  41720302 taaagagtgggtgtaccgatacactcaaatatagtgggtgtaccatagaattt 41720250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 136
Target Start/End: Original strand, 45107946 - 45108030
Alignment:
Q  53 ttttaatctacacctttcattttaatccaaaggtctatatttattcctctca-tctctcataataactagtgctctcacttgata 136  Q
    |||||||||||||| | ||||||||| ||| |||||   |||||||||||||  ||||||| |||| |||| |||||||||||||    
T  45107946 ttttaatctacaccgtacattttaattcaatggtcttcttttattcctctcaccctctcattataaatagtactctcacttgata 45108030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 40776970 - 40777025
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||||||||| |||||   ||||||||||||| || ||||||||||||||||||||    
T  40776970 taaaaagtgaatgtacgaatacactcaaatattttgggtgtaccatagaattttcc 40777025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 36162234 - 36162193
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||| |||||||||||||||||| ||||||| |||||||||    
T  36162234 tgtactggtacactcaaatatattgggtgtactatagaattt 36162193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 36835387 - 36835342
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattttcc 200  Q
    |||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  36835387 gtgtaccgatacacccaaatttatttggtgtaccatagaattttcc 36835342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 10706920 - 10706952
Alignment:
Q  165 acactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||| |||||||||||||||||    
T  10706920 acactcaaatatattgggtgtaccatagaattt 10706952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 20105075 - 20105119
Alignment:
Q  95 attcctctcatc-tctcataataactagtgctctcacttgatatg 138  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||    
T  20105075 attcctctcatcctctcattataactagtcctctcacttgatatg 20105119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 1580593 - 1580645
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  1580593 taaagagtaagtgtaccggtacactcaaatatattgggtgtaccatagaattt 1580645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 40947115 - 40947167
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  40947115 taaagagtgagtgtaccggtacactcaaatatattgggtgcaccatagaattt 40947167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 45157585 - 45157533
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  45157585 taaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaattt 45157533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 4740282 - 4740230
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||| |||||    
T  4740282 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccataaaattt 4740230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 6945395 - 6945343
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||| || ||||||||||||||||||||||||| | |||||||||||||||    
T  6945395 taaaaaatgggtgtaccggtacactcaaatatattggatgtaccatagaattt 6945343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 7673651 - 7673703
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||| | | |||||||||||||||||    
T  7673651 taaagagtgagtgtaccggtacactcaaatacagtgggtgtaccatagaattt 7673703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 9589168 - 9589116
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||| |||||    
T  9589168 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccataaaattt 9589116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 17451636 - 17451688
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||| |||||||||||||||  ||||||||||||||||||    
T  17451636 taaagagtgagtgtaccagtacactcaaatatagcaggtgtaccatagaattt 17451688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 18999071 - 18999123
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||||||||||||||||||||| | | |||||||||||||||    
T  18999071 taaagagtgagtgtaccggtacactcaaatatagtggatgtaccatagaattt 18999123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 21404550 - 21404602
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||| ||||||||||||||||| | |||||||||||||||||    
T  21404550 taaatagtgagtgtatcggtacactcaaatatagtgggtgtaccatagaattt 21404602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 35896774 - 35896816
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  35896774 gtgtaccggtacactcaaatatattgagtgtaccatagaattt 35896816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 3261017 - 3260965
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||| | ||| ||||||||||||| | |||||||||||||||    
T  3261017 taaaaagtgagtgtatcagtaaactcaaatatattggatgtaccatagaattt 3260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 4049312 - 4049364
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||||||||| ||||||||||||||||| | | |||||||||||||||    
T  4049312 taaagagtgagtgtaacggtacactcaaatatagtggatgtaccatagaattt 4049364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 14839861 - 14839809
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||||||||| |||||||||||||| | | |||||||||||||||||    
T  14839861 taaagagtgagtgtactggtacactcaaatacagtgggtgtaccatagaattt 14839809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 39620246 - 39620194
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| |||||||| |||||||||||||||| ||||||||||| |||||    
T  39620246 taaagagtgggtgtaccgatacactcaaatatattgggtgtaccataaaattt 39620194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 42849679 - 42849731
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| |||| ||||| ||||||||||||||||||| | |||||||||||||||    
T  42849679 taaagagtgggtgtatcggtacactcaaatatattggatgtaccatagaattt 42849731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 45632406 - 45632473
Alignment:
Q  77 atccaaaggtctatatttattcctctcatctctcataataactagtgctctcacttgatatgttctca 144  Q
    |||||| ||| || ||| ||||||||||||||||||  |||||| | ||||||||||||||| |||||    
T  45632406 atccaacggtttaaattaattcctctcatctctcattgtaactactcctctcacttgatatgctctca 45632473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 4298263 - 4298305
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||||||  |||||||||| |||||    
T  4298263 gtgtaccggtacactcaaatatattgagtgtaccataaaattt 4298305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 11088260 - 11088219
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  11088260 gtgtaccggtacactcaaatat-ttgggtgtaccatagaattt 11088219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 12962027 - 12962069
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  12962027 gtgtaccggtacactcaaatatgttgggtgtaccgtagaattt 12962069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 28318403 - 28318444
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  28318403 gtgtaccggtacactcaaa-atattagatgtaccatagaattt 28318444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 45264045 - 45264086
Alignment:
Q  156 tgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    ||||||||||||||||||||| || |||||||| ||||||||    
T  45264045 tgtaccggtacactcaaatatgttgggtgtaccgtagaattt 45264086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 30980935 - 30980883
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||||| ||||||  |||||| ||||||||| |||||||||||||||||    
T  30980935 taaagagtgaatgtaccaatacactaaaatatattgggtgtaccatagaattt 30980883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 32602655 - 32602687
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatata 177  Q
    |||| ||||||||||||||||||||||||||||    
T  32602655 taaagagtgagtgtaccggtacactcaaatata 32602687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 36926305 - 36926345
Alignment:
Q  97 tcctctcatctctcataataactagtgctctcacttgatat 137  Q
    ||||||||||||||||| |||  ||||||||||||||||||    
T  36926305 tcctctcatctctcatattaagaagtgctctcacttgatat 36926345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 40495520 - 40495468
Alignment:
Q  145 taaaaagtgagtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||| ||| |||||||||||||||||||||||| | ||||| || ||||||||    
T  40495520 taaagagtaagtgtaccggtacactcaaatatagtgggtgtgccgtagaattt 40495468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 200 - 242
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||||||||||||||||||| || |||||||||||||||||    
T  200 gtgtaccggtacactcaaatatgttgggtgtaccatagaattt 242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 3391 - 3433
Alignment:
Q  155 gtgtaccggtacactcaaatatattaggtgtaccatagaattt 197  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  3391 gtgtactggtacactcaaatatattgggtgtaccatagaattt 3433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 23708 - 23777
Alignment:
Q  71 attttaatccaaaggtctatatttattcctctcatc-tctcataataactagtgctctcacttgatatgt 139  Q
    ||||| |||||| | |||||||| |||||||||||| |||||| ||||||| | ||||||||||||||||    
T  23708 attttgatccaatgatctatattaattcctctcatcctctcattataactactactctcacttgatatgt 23777  T

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Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 22974 - 22918
Alignment:
Q  73 tttaatccaaaggtctatatttattcctctcatctctcataataactagtgctctca 129  Q
    ||||||||||||| |  |||||  |||||||||||||||| |||| |||||||||||    
T  22974 tttaatccaaaggccattatttcatcctctcatctctcattataaatagtgctctca 22918  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 34464 - 34524
Alignment:
Q  44 aagtggaccttttaatctacacctttcattttaatccaaaggtctatatttattcctctca 104  Q
    ||||||| |||||||||| |||| |||||||  ||| || |||||||||||| ||||||||    
T  34464 aagtggatcttttaatctgcaccattcatttagatctaatggtctatatttactcctctca 34524  T

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