View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7768_high_23 (Length: 254)
Name: NF7768_high_23
Description: NF7768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7768_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 5295042 - 5295280
Alignment:
| Q |
1 |
cggagtttgctaataaggttggagaagatgaagttgaaagtcctcatcctgttatgatgaagaagaaagctcgtgttttcgtggttcccaagattgaaat |
100 |
Q |
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| T |
5295042 |
cggagtttgctaataaggttggagaagatgaagttgaaagtcctcatcctgttatgatgaagaagaaagctcgtgttttcgtggtgcccaagattgaaat |
5295141 |
T |
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| Q |
101 |
tccgaattttcagtgatgaattatttgagatgtagatttacttttagtgaaagattagtagacaagtttattttatttcttatttggaaaattttgagga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
5295142 |
tccgaattttcagtgatgaattatttgagatgtagatttacttttagtgaaagattagtagacaagtttattttatttcttatttggaaaatttttagga |
5295241 |
T |
|
| Q |
201 |
ttatatgattttgtataaaatttgggtttggggattcat |
239 |
Q |
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||||||||||||||||||| |||||||| |||||||||| |
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| T |
5295242 |
ttatatgattttgtataaagtttgggttgggggattcat |
5295280 |
T |
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