View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7768_high_25 (Length: 252)
Name: NF7768_high_25
Description: NF7768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7768_high_25 |
 | |
|
| [»] scaffold0692 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 22)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10559099 - 10558860
Alignment:
| Q |
1 |
caattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10559099 |
caattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctaca |
10559000 |
T |
|
| Q |
101 |
ttcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaac |
200 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10558999 |
ttcatcatccttgaatgcaaccagttttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaac |
10558900 |
T |
|
| Q |
201 |
aacaagttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10558899 |
aacaagttaaaatcttaaccagatttcgatgtctaatatt |
10558860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 10763145 - 10763363
Alignment:
| Q |
1 |
caattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctaca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||| |||| || |
|
|
| T |
10763145 |
caattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgatcaagatccaatgttgttggagtctctgca |
10763244 |
T |
|
| Q |
101 |
ttcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaac |
200 |
Q |
| |
|
|| | |||| | |||| ||| | |||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||| |||||| ||||||||| |
|
|
| T |
10763245 |
tttaaattcctagggtgcagccatcgttctaagcttccatttttcatgtaatcaaaaaccagagctttaaattcttgacctttataatcagtactagaac |
10763344 |
T |
|
| Q |
201 |
aacaagttaaaatcttaac |
219 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
10763345 |
aacatgttaaaatcttaac |
10763363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 240
Target Start/End: Complemental strand, 9825261 - 9825058
Alignment:
| Q |
38 |
gaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttgaatgcaaccagctttctaagcttc |
137 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||| ||| || |||||||||||| ||||||| || |||||| ||||||||||| |
|
|
| T |
9825261 |
gaagcaacatcaataatgatattcaatctttgatcaagatccaatgttctaggatgctctacattctctatccttggattcaaccattgttctaagcttc |
9825162 |
T |
|
| Q |
138 |
c-atttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatttcgatgtctaa |
236 |
Q |
| |
|
| ||||| |||||| ||||||||||||||||||||||| || ||||||||||| ||||||||| |||| |||||||||||||||| |||||||||||||| |
|
|
| T |
9825161 |
ccattttgcatgtactcaaaaactagagctttgaattcttgccctttgtaatcgatactagaaaaacatgttaaaatcttaaccaaatttcgatgtctaa |
9825062 |
T |
|
| Q |
237 |
tatt |
240 |
Q |
| |
|
|||| |
|
|
| T |
9825061 |
tatt |
9825058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 19605877 - 19606116
Alignment:
| Q |
1 |
caattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctaca |
100 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||| |||||| | || |||||| | |||||| | || | ||||| |||||| || ||| || |
|
|
| T |
19605877 |
caattgctcacattcatgatgaaggtaatgtaatgcagaagaaacatcgacaaggatatttaatctttgctcaaacttcaatgttcttggatgatctgca |
19605976 |
T |
|
| Q |
101 |
ttcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaac |
200 |
Q |
| |
|
||||| ||| | ||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
19605977 |
ttcattgtcccgggatgcaaccattgttctaagcttccatttctcatgtactcaaaaactagagctttgaattctagacctttgttatcaatactagaac |
19606076 |
T |
|
| Q |
201 |
aacaagttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
19606077 |
aacaagttaaaatcttaactaaatttcgatgtctaatatt |
19606116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 10611907 - 10611670
Alignment:
| Q |
1 |
caattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctaca |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| ||||||| |||||||| || | ||| ||| | || ||||||| | || |||||| || |
|
|
| T |
10611907 |
caattgctcacattcattatgaagataatgtaatgcagaaccaacatccataatgatgtttaatctatgactgaggtccaatgttgctgtatgctcttca |
10611808 |
T |
|
| Q |
101 |
ttcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaac |
200 |
Q |
| |
|
|| | | | | | ||||||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||| ||||||||| |
|
|
| T |
10611807 |
tttaaaaccttgggatgcaaccattgttctaagcttccatttttcatgtaatcaaaaactagggctttaaattcttgacctttgtaatctgtactagaac |
10611708 |
T |
|
| Q |
201 |
aacaagttaaaatcttaaccagatttcgatgtctaata |
238 |
Q |
| |
|
|||| |||||||||||||| | |||||| ||||||||| |
|
|
| T |
10611707 |
aacatgttaaaatcttaactaaatttcggtgtctaata |
10611670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 10604948 - 10604738
Alignment:
| Q |
2 |
aattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacat |
101 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| || | ||||| | ||| ||||| | | |||| ||||| ||| |
|
|
| T |
10604948 |
aattgctcacattcttgatgaagataatgcaatgcagaagcaacatcaaaaatgatgttaaatcttttaccaaggtccaacgttgttggaggctctgcat |
10604849 |
T |
|
| Q |
102 |
tcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaaca |
201 |
Q |
| |
|
| | ||| | ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
10604848 |
ttaaaatctcaggatgcaaccattgttctaagcttccatttttcatgtaatcaaaaactagagctttaaattcttgacctttgtaatctgtactagaaca |
10604749 |
T |
|
| Q |
202 |
acaagttaaaa |
212 |
Q |
| |
|
||| ||||||| |
|
|
| T |
10604748 |
acatgttaaaa |
10604738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 243
Target Start/End: Original strand, 10588446 - 10588684
Alignment:
| Q |
5 |
tgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattca |
104 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||||| ||| ||| ||||||| | ||| ||| ||| ||||| | |||||| |||||| ||||| |
|
|
| T |
10588446 |
tgctcacattcatgatgaagataatgtagtgcagaagcaatatcgatagtgatatttaatctatgaacaaggtccaacgttcttggatgctctgaattca |
10588545 |
T |
|
| Q |
105 |
tcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaaca |
204 |
Q |
| |
|
||| || ||| | ||| |||||| ||||||||||||||||| |||||||||| |||||| ||||| |||||||| |||||| ||| ||||||||| |
|
|
| T |
10588546 |
cattccatggatgaagccattgttctaaacttccatttttcatgtaatcaaaaactaaagctttaaattcttgacctttataatcagtaccagaacaaca |
10588645 |
T |
|
| Q |
205 |
agttaaaatcttaaccagatttcgatgtctaatattctt |
243 |
Q |
| |
|
||||||||||| ||| |||||||||||||| |||||| |
|
|
| T |
10588646 |
tgttaaaatcttggccaaatttcgatgtctaacattctt |
10588684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 9850838 - 9850952
Alignment:
| Q |
127 |
ttctaagcttccatttttcatgtattcaaaaactagagcttt-gaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatt |
225 |
Q |
| |
|
|||||||||||||||| ||||||| | ||||||||||||||| |||||| || ||||||||||| |||||||||||| |||||||||||||||||| ||| |
|
|
| T |
9850838 |
ttctaagcttccatttatcatgtactaaaaaactagagcttttgaattcatgccctttgtaatcgatactagaacaagaagttaaaatcttaaccaaatt |
9850937 |
T |
|
| Q |
226 |
tcgatgtctaatatt |
240 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
9850938 |
tcgatgtctaatatt |
9850952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 243
Target Start/End: Original strand, 10747028 - 10747269
Alignment:
| Q |
2 |
aattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacat |
101 |
Q |
| |
|
||||||||||||||| | |||||||||||||||| ||||||||||| |||||||| || | ||| || ||| || || | | |||| |||||| ||| |
|
|
| T |
10747028 |
aattgctcacattcttggtgaagataatgtaatgttgaagcaacatcgataatgatgtttaatctgtggccaaggtctaacgtttttggatgctcttcat |
10747127 |
T |
|
| Q |
102 |
tcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaaca |
201 |
Q |
| |
|
| | | | | ||||||||| |||||||||||||||||| ||||| | ||||||||||||||| || |||||| |||||||||| ||||||||||| |
|
|
| T |
10747128 |
ttaaaaactcaggatgcaaccattgttctaagcttccattttttatgtaataaaaaactagagctttaaactcctgaactttgtaatctatactagaaca |
10747227 |
T |
|
| Q |
202 |
acaagttaaaatcttaaccagatttcgatgtctaatattctt |
243 |
Q |
| |
|
||| |||||||||||||| | |||||| |||||||| ||||| |
|
|
| T |
10747228 |
acacgttaaaatcttaactaaatttcggtgtctaatgttctt |
10747269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 11048669 - 11048905
Alignment:
| Q |
1 |
caattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctaca |
100 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| || | || | | ||| ||||||| | |||| |||||| | |
|
|
| T |
11048669 |
caattgctcacattcttgatgcagataatgtaatgcagaagcaacatcgataatgatgtttaacctatcaccaaggtccaatgtttttggatgctctgaa |
11048768 |
T |
|
| Q |
101 |
ttcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaac |
200 |
Q |
| |
|
|| | ||| | ||| ||||| |||||||||||||||||||||||| ||||||||||| ||||| ||||| | |||||||||||| ||||||||| |
|
|
| T |
11048769 |
tttaaaatctcaggatgtaaccattgttctaagcttccatttttcatgtaatcaaaaactagtgctttaaattcttcacctttgtaatctgtactagaac |
11048868 |
T |
|
| Q |
201 |
aacaagttaaaatcttaaccagatttcgatgtctaat |
237 |
Q |
| |
|
|||| ||||||| |||||| | ||||| |||||||| |
|
|
| T |
11048869 |
aacaggttaaaaccttaactaagtttcggtgtctaat |
11048905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 240
Target Start/End: Complemental strand, 7193200 - 7192963
Alignment:
| Q |
3 |
attgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacatt |
102 |
Q |
| |
|
||||||||||||| ||||||| ||||||||| || | |||| ||||| | |||||||| |||||||| ||| ||||| | |||| | | ||||||||| |
|
|
| T |
7193200 |
attgctcacattcaagatgaaggtaatgtaatacaaaggcaatatcaacagcgatattcaatctttgatcaaggtccaacgttctttgattctctacatt |
7193101 |
T |
|
| Q |
103 |
ca-tcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaaca |
201 |
Q |
| |
|
|| | ||| | | ||| | ||| |||||||||||| || |||||||||||||| |||| |||||| ||||| |||||||||||||| |||| ||||| |
|
|
| T |
7193100 |
cactgatc-taggatgtagccattgttctaagcttccgttgttcatgtattcaaagactaaagctttaaattcttgacctttgtaatctgtactggaaca |
7193002 |
T |
|
| Q |
202 |
acaagttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
||| || ||||||||||||| |||||||||||||||||| |
|
|
| T |
7193001 |
acatgtcaaaatcttaaccaaatttcgatgtctaatatt |
7192963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 10216761 - 10216979
Alignment:
| Q |
1 |
caattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctaca |
100 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||| ||||||||||| |||||||| || | || ||| ||| ||||||| | |||| |||||| | |
|
|
| T |
10216761 |
caattgctcacattcttgatgcagataatgtaatgccgaagcaacatcgataatgatgtttaacctatgaccaaggtccaatgtttttggatgctctgaa |
10216860 |
T |
|
| Q |
101 |
ttcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaac |
200 |
Q |
| |
|
|| | ||| | ||||||||| |||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||| | ||||||||| |
|
|
| T |
10216861 |
tttaaaatctcaggatgcaaccattgttctaagcttccatttttcatgtaataaaaaactagagctttaaattcttgacctttgtagtttgtactagaac |
10216960 |
T |
|
| Q |
201 |
aacaagttaaaatcttaac |
219 |
Q |
| |
|
|||| ||||||| |||||| |
|
|
| T |
10216961 |
aacatgttaaaaccttaac |
10216979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 9836343 - 9836579
Alignment:
| Q |
4 |
ttgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattc |
103 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||||||| |||||| |||||| ||||||||| ||| | ||||| ||| || | |||| || | |
|
|
| T |
9836343 |
ttgctcacattcacaatgaagataatgtaatgcagaagcaatatcaatggagatatttagtctttgaacaaggttcaatgttctaggatactctgaatcc |
9836442 |
T |
|
| Q |
104 |
atcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaac |
203 |
Q |
| |
|
| ||| | || | ||| |||||||||||||||||||||||| |||||||||| |||||| ||||| |||||| ||||||||||||||||||| |
|
|
| T |
9836443 |
actgtccagggataaagccattgttctaagcttccatttttcatgtaatcaaaaactaaagctttaaattctccacctttataatcaatactagaacaac |
9836542 |
T |
|
| Q |
204 |
aagttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
| |||| || ||| |||| |||||||||||||||||| |
|
|
| T |
9836543 |
atgttataaccttgaccaaatttcgatgtctaatatt |
9836579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 10565217 - 10564985
Alignment:
| Q |
8 |
tcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatca |
107 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| ||||| || | | ||| ||| || ||||||| | |||| | ||| |||| | | |
|
|
| T |
10565217 |
tcacattctctatgaagataatgtaatgcagaagcaacatcgataataatgtataatctatgagcaaagtccaatgttgttgggggttctgcatttaaaa |
10565118 |
T |
|
| Q |
108 |
tccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagt |
207 |
Q |
| |
|
|| | ||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||| |||| |||||||| || |
|
|
| T |
10565117 |
tctcaggatgcaaccattgatctaagcttccatttttcatgtactcaaaaaccagagctttaaattcttgacctttgtaatctgtacttgaacaacaggt |
10565018 |
T |
|
| Q |
208 |
taaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
||||| |||||| | |||||| |||| |||||| |
|
|
| T |
10565017 |
taaaaccttaactaaatttcggtgtcgaatatt |
10564985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 240
Target Start/End: Original strand, 10716953 - 10717191
Alignment:
| Q |
2 |
aattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacat |
101 |
Q |
| |
|
||||| ||||||||| | ||||||||||||||||||| || ||||| || ||||| || | ||| ||| ||| ||||||| |||||| || ||| ||| |
|
|
| T |
10716953 |
aattgttcacattcttggtgaagataatgtaatgcagtggcgacatcgatcatgatgtttaatctatgaccaaggtccaatgttcttggatgatctgcat |
10717052 |
T |
|
| Q |
102 |
tcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaaca |
201 |
Q |
| |
|
| | ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||| |
|
|
| T |
10717053 |
ttaaaatctcaagatgcaaccattgttctaagcttccatttttcatgtaatcaaaaactagagctttaaaagtttgacctttgtaatctgtactagaaca |
10717152 |
T |
|
| Q |
202 |
acaagttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
||| ||||| ||||| || |||||||| ||||| ||||| |
|
|
| T |
10717153 |
acatgttaatatcttcactagatttcggtgtctgatatt |
10717191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10581200 - 10580962
Alignment:
| Q |
1 |
caattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctaca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || | ||| ||| ||| | ||||| | || | | ||| || |
|
|
| T |
10581200 |
caattgctcacattctcgatgaagataatgtaatgcagaagcaacatccataatgatgtttaatctatgaccaaggttcaatgttgttagaggttctgca |
10581101 |
T |
|
| Q |
101 |
ttcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaac |
200 |
Q |
| |
|
| | ||| | ||||||||| |||||||||||||||||||||||| | |||||||| |||||| ||||| || |||||||||| ||||||||| |
|
|
| T |
10581100 |
ctta-aatctgaggatgcaaccattgttctaagcttccatttttcatgtaataaaaaactaaagctttaaattcttggcctttgtaatttgtactagaac |
10581002 |
T |
|
| Q |
201 |
aacaagttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
|||| |||| || ||| || | |||| | ||||||||||| |
|
|
| T |
10581001 |
aacatgttagaaccttgactaaattttggtgtctaatatt |
10580962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 10740711 - 10740950
Alignment:
| Q |
1 |
caattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctaca |
100 |
Q |
| |
|
|||||| ||||||||| | ||||||||||||||||||| || ||||| | ||||| || | ||| ||| ||| ||||||| |||||| || ||| || |
|
|
| T |
10740711 |
caattgttcacattcttggtgaagataatgtaatgcagtggcgacatcgttcatgatgtttaatctatgaccaaggtccaatgttcttggatgatctgca |
10740810 |
T |
|
| Q |
101 |
ttcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaac |
200 |
Q |
| |
|
|| | ||| ||||||||| |||||||||||||||||||||||| |||||||| |||||||| || |||||||||||||| ||||||||| |
|
|
| T |
10740811 |
tttaaaatctcaagatgcaaccattgttctaagcttccatttttcatgtaatcaaaaacaagagctttaaaagtttgacctttgtaatctgtactagaac |
10740910 |
T |
|
| Q |
201 |
aacaagttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
|||| || ||||||||||| | |||||| ||||||||||| |
|
|
| T |
10740911 |
aacatgtcaaaatcttaactaaatttcggtgtctaatatt |
10740950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 10652217 - 10652453
Alignment:
| Q |
4 |
ttgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattc |
103 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| ||||||||| |||| |||||||||||||| ||||| ||| ||||| |||| | | || ||||| |
|
|
| T |
10652217 |
ttgctcacattcatgatgaaggtaatgtaatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattc |
10652316 |
T |
|
| Q |
104 |
atcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaac |
203 |
Q |
| |
|
|| || | || ||| | ||| ||||| | |||| || |||||||||||||| |||| ||| || || || |||||||||||||| |||| ||||||| |
|
|
| T |
10652317 |
attatacctggatgtagccattgttctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaac |
10652416 |
T |
|
| Q |
204 |
aagttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
| || |||| |||||||| ||||| ||| || ||||| |
|
|
| T |
10652417 |
atgtcaaaaccttaaccaaatttctatgcctcatatt |
10652453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 10660100 - 10660336
Alignment:
| Q |
4 |
ttgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattc |
103 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| || ||||| |||| |||||||||||||| ||||| ||| ||||| |||| | | || ||||| |
|
|
| T |
10660100 |
ttgctcacattcgtgatgaaggtaatgtaatacactagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacaatctttgaatccctgcattc |
10660199 |
T |
|
| Q |
104 |
atcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaac |
203 |
Q |
| |
|
|| || | || ||| | ||| ||||| ||||||||| |||||||||||||| |||| ||| || || || |||||||||||||| |||| ||||||| |
|
|
| T |
10660200 |
attatacctggatgtagccattgttctaggcttccattgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatctgtacttgaacaac |
10660299 |
T |
|
| Q |
204 |
aagttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
| || |||| ||| |||| ||||| ||| || ||||| |
|
|
| T |
10660300 |
atgtcaaaaccttgaccaaatttctatgcctcatatt |
10660336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 240
Target Start/End: Complemental strand, 10550867 - 10550742
Alignment:
| Q |
115 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
214 |
Q |
| |
|
||||||||| |||||||| |||||||| ||||||| ||||| || |||||||| || || ||||||||||| | || ||||||||||| ||||| |
|
|
| T |
10550867 |
atgcaaccaattttctaagtttccatttctcatgtactcaaatacaagagctttaaactcacttcctttgtaatctgtgctggaacaacaagtcaaaatt |
10550768 |
T |
|
| Q |
215 |
ttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
||||| ||||||| || |||||||| |
|
|
| T |
10550767 |
ttaactagatttctgtgcctaatatt |
10550742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 9849930 - 9849983
Alignment:
| Q |
50 |
ataatgatattcagtctttgattaagatccaatgctcttggttgctctacattc |
103 |
Q |
| |
|
||||||||||||| |||||||| |||||| |||| | |||| |||||||||||| |
|
|
| T |
9849930 |
ataatgatattcaatctttgatcaagatcaaatgttgttggatgctctacattc |
9849983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 35754910 - 35754837
Alignment:
| Q |
152 |
tcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatt |
225 |
Q |
| |
|
|||||||| | ||||||||| || | ||| || ||||||| ||| |||||||||||||||||||| || ||||| |
|
|
| T |
35754910 |
tcaaaaacaatagctttgaaatcttcaccattataatcaacacttgaacaacaagttaaaatcttgacaagatt |
35754837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 233
Target Start/End: Complemental strand, 12899766 - 12899535
Alignment:
| Q |
2 |
aattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacat |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || | ||| ||| ||| | ||||| | |||| | | | ||| |
|
|
| T |
12899766 |
aattgctcacattctcgatgaagataatgtaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcat |
12899667 |
T |
|
| Q |
102 |
tcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaaca |
201 |
Q |
| |
|
||| || | ||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||||||| |
|
|
| T |
12899666 |
tcaaagtctcgggatgtaaccattgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaaca |
12899567 |
T |
|
| Q |
202 |
acaagttaaaatcttaaccagatttcgatgtc |
233 |
Q |
| |
|
||| ||||||| |||||||| |||||| |||| |
|
|
| T |
12899566 |
acatgttaaaaccttaaccaaatttcggtgtc |
12899535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 240
Target Start/End: Complemental strand, 12948840 - 12948602
Alignment:
| Q |
2 |
aattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacat |
101 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| || | ||| || ||| | ||||| | |||| | | | ||| |
|
|
| T |
12948840 |
aattgctcacattatcgatgaagataatgtaatgcagaagcaacatcgataatgatgtttaatctacgacgaaggttcaatgttgttggaggatttgcat |
12948741 |
T |
|
| Q |
102 |
tcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaaca |
201 |
Q |
| |
|
||| || | ||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| || | |||||||| |
|
|
| T |
12948740 |
tcaaagtctcaggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttggcctttgttatttgtgctagaaca |
12948641 |
T |
|
| Q |
202 |
acaagttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
||| ||||||| |||||||| |||||| ||||||||||| |
|
|
| T |
12948640 |
acatgttaaaaccttaaccaaatttcggtgtctaatatt |
12948602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 12907383 - 12907148
Alignment:
| Q |
5 |
tgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattca |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || ||||| || | ||| || ||| | ||||| | |||| | | | |||||| |
|
|
| T |
12907383 |
tgctcacattctcgatgaagataatgtaatgcagaagcaacatcgatgatgatgtttaatctaagaccaaggttcaatgttgttggaggatttgcattca |
12907284 |
T |
|
| Q |
105 |
tcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaaca |
204 |
Q |
| |
|
| | ||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||||| |
|
|
| T |
12907283 |
aagtttcaggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaaca |
12907184 |
T |
|
| Q |
205 |
agttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
12907183 |
tgttaaaaccttaaccaaatttctgtgtctaatatt |
12907148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 12932472 - 12932237
Alignment:
| Q |
5 |
tgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattca |
104 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||| || ||||| || | ||| ||| ||| | ||||| | |||| | | | |||||| |
|
|
| T |
12932472 |
tgctcacattctcgatgaaggtaatgcaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcattca |
12932373 |
T |
|
| Q |
105 |
tcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaaca |
204 |
Q |
| |
|
|| | ||| ||||| |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| | ||||||||||| |
|
|
| T |
12932372 |
aagtctcaggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagtgctttaaattcttgacctttgtaatttgtgctagaacaaca |
12932273 |
T |
|
| Q |
205 |
agttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
||||||| |||||||| |||||| ||||||||||| |
|
|
| T |
12932272 |
tgttaaaaccttaaccaaatttcggtgtctaatatt |
12932237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 12958271 - 12958036
Alignment:
| Q |
5 |
tgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttg-ctctacattc |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || ||||| || | ||| ||| ||| | ||||| | |||| | ||| ||||| |
|
|
| T |
12958271 |
tgctcacattctcgatgaagataatgtaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggactcg-cattc |
12958173 |
T |
|
| Q |
104 |
atcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaac |
203 |
Q |
| |
|
| || | ||| ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| | |||||||||| |
|
|
| T |
12958172 |
aaaatttgaggatgtaaccactgttctaagcttccattttccatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaac |
12958073 |
T |
|
| Q |
204 |
aagttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
| ||||||| | |||||| |||||| ||||||||||| |
|
|
| T |
12958072 |
atgttaaaaccctaaccaaatttcggtgtctaatatt |
12958036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 17923419 - 17923654
Alignment:
| Q |
5 |
tgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattca |
104 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||| || ||||| || | ||| ||| ||| | ||||| | |||| | | | |||||| |
|
|
| T |
17923419 |
tgctcacattctcgatgaaggtaatgcaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcattca |
17923518 |
T |
|
| Q |
105 |
tcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaaca |
204 |
Q |
| |
|
|| | ||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||||| |
|
|
| T |
17923519 |
aagtctcaggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaaca |
17923618 |
T |
|
| Q |
205 |
agttaaaatcttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
||||||| |||||||| |||||| ||||||||||| |
|
|
| T |
17923619 |
tgttaaaaccttaaccaaatttcggtgtctaatatt |
17923654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 7489 - 7264
Alignment:
| Q |
2 |
aattgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacat |
101 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || | ||| ||| ||| | ||||| | |||| | | | ||| |
|
|
| T |
7489 |
aattgctcacattctcgatgaagttaatgtaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttattggaggatttgcat |
7390 |
T |
|
| Q |
102 |
tcatcatccttgaatgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaaca |
201 |
Q |
| |
|
||| || | ||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | |||||||| |
|
|
| T |
7389 |
tcaaagtctcaggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaaca |
7290 |
T |
|
| Q |
202 |
acaagttaaaatcttaaccagatttc |
227 |
Q |
| |
|
||| ||||||| | |||||| ||||| |
|
|
| T |
7289 |
acatgttaaaaccctaaccaaatttc |
7264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 240
Target Start/End: Original strand, 31467288 - 31467413
Alignment:
| Q |
115 |
atgcaaccagctttctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatc |
214 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||| || ||||| |||||||| ||||| ||| ||||| |||| |||| ||||| | ||||||||| |
|
|
| T |
31467288 |
atgcaaccaactttctaagcttccgtttttcatgtactcgaaaacaagagctttaaattcttgatctttgaaatctgtactggaacagcttgttaaaatc |
31467387 |
T |
|
| Q |
215 |
ttaaccagatttcgatgtctaatatt |
240 |
Q |
| |
|
||||||| |||||| ||||||||||| |
|
|
| T |
31467388 |
ttaaccaaatttcggtgtctaatatt |
31467413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 31467177 - 31467233
Alignment:
| Q |
4 |
ttgctcacattctcgatgaagataatgtaatgcagaagcaacatcaataatgatatt |
60 |
Q |
| |
|
||||| |||||| ||||||||||||| ||||| |||||||| |||||||| ||||| |
|
|
| T |
31467177 |
ttgctgacattcatgatgaagataatgaaatgccgaagcaacgtcaataataatatt |
31467233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 28605696 - 28605599
Alignment:
| Q |
128 |
tctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatt |
225 |
Q |
| |
|
||||| |||||||||| |||||| |||||||||| |||||||||||| | ||| |||||||| ||||| |||||||| ||||||||||| || ||||| |
|
|
| T |
28605696 |
tctaaacttccattttccatgtactcaaaaactaaagctttgaattcattaccattgtaatccatacttgaacaacatgttaaaatcttgacaagatt |
28605599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 39898834 - 39898867
Alignment:
| Q |
128 |
tctaagcttccatttttcatgtattcaaaaacta |
161 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |
|
|
| T |
39898834 |
tctaagcttccatttgtcatgtattcaaaaacta |
39898867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 240
Target Start/End: Original strand, 39876022 - 39876134
Alignment:
| Q |
128 |
tctaagcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatttc |
227 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||| || || || || | |||||||| ||| | |||||| ||||| || | |||||| || ||||||| |
|
|
| T |
39876022 |
tctaagctcccatttttcatgtattcataaactattgccttaaagtcgtcacctttgtgatccacactagagcaacatgtgataatcttgactagatttc |
39876121 |
T |
|
| Q |
228 |
gatgtctaatatt |
240 |
Q |
| |
|
||| || ||||| |
|
|
| T |
39876122 |
tatgcctgatatt |
39876134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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