View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7768_low_3 (Length: 587)

Name: NF7768_low_3
Description: NF7768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7768_low_3
NF7768_low_3
[»] chr3 (3 HSPs)
chr3 (17-570)||(12734929-12735482)
chr3 (379-570)||(32579004-32579186)
chr3 (311-356)||(32579203-32579248)
[»] scaffold0464 (1 HSPs)
scaffold0464 (17-570)||(7448-7992)
[»] chr7 (13 HSPs)
chr7 (406-570)||(19357683-19357841)
chr7 (146-261)||(19351469-19351584)
chr7 (378-444)||(19721769-19721835)
chr7 (310-357)||(19357587-19357634)
chr7 (379-446)||(19779351-19779418)
chr7 (379-446)||(19887965-19888032)
chr7 (399-448)||(19351321-19351370)
chr7 (288-356)||(19779266-19779334)
chr7 (305-356)||(19888049-19888100)
chr7 (406-444)||(18953167-18953205)
chr7 (406-444)||(18983214-18983252)
chr7 (30-94)||(19888299-19888363)
chr7 (41-109)||(21219291-21219359)
[»] chr2 (7 HSPs)
chr2 (401-570)||(18908948-18909108)
chr2 (447-570)||(18920904-18921027)
chr2 (21-105)||(18914119-18914203)
chr2 (33-105)||(18921309-18921381)
chr2 (146-189)||(18914050-18914093)
chr2 (401-447)||(18913810-18913856)
chr2 (23-96)||(18909386-18909459)
[»] chr6 (3 HSPs)
chr6 (288-361)||(14749057-14749131)
chr6 (21-102)||(14748805-14748886)
chr6 (406-446)||(14749173-14749213)
[»] chr5 (2 HSPs)
chr5 (74-104)||(28764495-28764525)
chr5 (413-445)||(28764166-28764198)


Alignment Details
Target: chr3 (Bit Score: 446; Significance: 0; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 17 - 570
Target Start/End: Complemental strand, 12735482 - 12734929
Alignment:
Q  17 atcaccattctcaatgatccttattaccgattgagtaatatggattgctgtgatatcgttggttcctgtaatggattgatatgtttgcgcggtgcttctt 116  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  |||| ||||||||||  ||||||||||||||||||  ||||||||||     
T  12735482 atcaccattctcaatgatccttattaccgattgagtaatatagattgctgcaatattgttggttcctacaatggattgatatgtttgtccggtgcttcta 12735383  T
Q  117 ggaatgccgcctctacctacaaagacatgtggttccgtctctggaacccagccacaaatacattatctgaaaaattcgggtattcagctaacctttttcg 216  Q
    ||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12735382 ggaatgctgccgctaactacaaagacacgtggttccgtctctggaacccagccacaaatacattatctgaaaaattcgggtattcaactaacctttttcg 12735283  T
Q  217 gtatacatttggctatgatatttcaaatgatggttataaggtggttgccttctcgtcagaacaggacgagaaggtaaaagttttctgcttgactgataat 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12735282 gtatacatttggctatgatatttcaaatgatggttataaggtggttgccttctcgtcagaacaggacgaaaaggtaaaagttttctgcttgactgataat 12735183  T
Q  317 gtttggagagatattcctacttttcccgttgttccttttggcctctgtcgtcgccgtttctattgtcatccatttgcgagtcatggtgcgtatgtgagtg 416  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12735182 gtttggagagatattcctccttttcccgttgttccttttggactctgtcgtagccgtttctattgtcatccatttgcgagtcatggtgcgtatgtaagtg 12735083  T
Q  417 gcactattaactggttggctattcgaaatattcgaaatatgaatgaatatgaatggaatgatatttcaatcaaccaatttgtgatcttatcacttgttct 516  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  12735082 gcactgttaactggttggctattcgaaatattaaaaatatgaatgaatatgaatggaatgatatttcagtcaaccaatttgtgatcgtatcacttgttct 12734983  T
Q  517 ggctacagagacattcaggcagttgctgccacccaacggttttgttgaagtacc 570  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  12734982 ggctacagagacatttaggcagttgttgccacccaacggttttgttgaaatacc 12734929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 570
Target Start/End: Complemental strand, 32579186 - 32579004
Alignment:
Q  379 ttgtcatccatttgcgagtcatggtgcgtatgtgagtggcactattaactggttggctattcgaaatattcgaaatatgaatgaatatgaatggaatgat 478  Q
    ||||||||||| || || | | |||| ||||||||||||||||||||| |||||||||||||||||||          || |||||||||| ||||||||    
T  32579186 ttgtcatccatatgtgaataacggtgtgtatgtgagtggcactattaattggttggctattcgaaataa---------gactgaatatgaaaggaatgat 32579096  T
Q  479 atttcaatcaaccaatttgtgatcttatcacttgttctggctacagagacattcaggcagttgctgccacccaacggttttgttgaagtacc 570  Q
    ||||||||| | |||||| | || |||||||||| |||| |||| ||||||| | | || ||||||||| |  | || ||||||||||||||    
T  32579095 atttcaatcgagcaatttctcattttatcacttgatctgactacggagacataccgacatttgctgccatcgcagggatttgttgaagtacc 32579004  T

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Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 32579248 - 32579203
Alignment:
Q  311 gataatgtttggagagatattcctacttttcccgttgttccttttg 356  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||    
T  32579248 gataatgtttggagagatattccaaatttttccgttgttccttttg 32579203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 394; Significance: 0; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 17 - 570
Target Start/End: Original strand, 7448 - 7992
Alignment:
Q  17 atcaccattctcaatgatccttattaccgattgagtaatatggattgctgtgatatcgttggttcctgtaatggattgatatgtttgcgcggtgcttctt 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  7448 atcaccattctcaattatccttattaccgattgagtaatatggattgctgtaatatcgttggttcctgtaatggattgatatgtttgcacggtgcttctt 7547  T
Q  117 ggaatgccgcctctacctacaaagacatgtggttccgtctctggaacccagccacaaatacattatctgaaaaattcgggtattcagctaacctttttcg 216  Q
    ||||||||||| ||| | || |||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  7548 ggaatgccgccgctaacgacgaagacatgtggttctgtctctggatcccagccacaaatacattatcagaaaaattcgggtattcaactatcctttttcg 7647  T
Q  217 gtatacatttggctatgatatttcaaatgatggttataaggtggttgccttctcgtcagaacaggacgagaaggtaaaagttttctgcttgactgataat 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||| ||||||||||||||||||||||||||    
T  7648 gtatacatttggctatgatatttcaaatgatggttataaggtggttgccttctcgtccttttctgacgagaagctaaaagttttctgcttgactgataat 7747  T
Q  317 gtttggagagatattcctacttttcccgttgttccttttggcctctgtcgtcgccgtttctattgtcatccatttgcgagtcatggtgcgtatgtgagtg 416  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||| | | |||||| ||||||||||||||| ||| | |||||||||||||||||    
T  7748 gtttggagagatattcctacttttcccattgttccttttgacctctgtcatagacgtttcaattgtcatccatttgtgagccgtggtgcgtatgtgagtg 7847  T
Q  417 gcactattaactggttggctattcgaaatattcgaaatatgaatgaatatgaatggaatgatatttcaatcaaccaatttgtgatcttatcacttgttct 516  Q
    ||||| |||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  7848 gcactgttaactggttggc---------tattcgaaatatgaatgaatatgaatggaatgatatttcaatcaaccaatttgtgatcgtatcacttgttct 7938  T
Q  517 ggctacagagacattcaggcagttgctgccacccaacggttttgttgaagtacc 570  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7939 ggctacagagacatttaggcagttgctgccacccaacggttttgttgaagtacc 7992  T

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Target: chr7 (Bit Score: 60; Significance: 3e-25; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 406 - 570
Target Start/End: Original strand, 19357683 - 19357841
Alignment:
Q  406 gtatgtgagtggcactattaactggttggctattcgaaatattcgaaatatgaatgaatatgaatggaatgatatttcaatcaaccaatttgtgatctta 505  Q
    ||||||||| ||||||||||||||||||||||||||||||||  ||    ||| | |||||||||||  ||||||| ||||  | |||||||||||| |     
T  19357683 gtatgtgagaggcactattaactggttggctattcgaaatat--gac---tga-tcaatatgaatggcgtgatattacaattgatcaatttgtgatcgtc 19357776  T
Q  506 tcacttgttctggctacagagacattcaggcagttgctgccacccaacggttttgttgaagtacc 570  Q
    ||||||| |||||| || |||||||  ||||||||||||||||| | ||||||||||||||||||    
T  19357777 tcacttgatctggccacggagacatataggcagttgctgccacctagcggttttgttgaagtacc 19357841  T

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Target: chr7; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 146 - 261
Target Start/End: Complemental strand, 19351584 - 19351469
Alignment:
Q  146 tggttccgtctctggaacccagccacaaatacattatctgaaaaattcgggtattcagctaacctttttcggtatacatttggctatgatatttcaaatg 245  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||| | ||||||||| ||||  |||||  ||  |||||||||||||||||||||||||    
T  19351584 tggttacgtttctggaacccagccacaaagacattatctgaaaaaatagggtattcaactaaattttttaagttaacatttggctatgatatttcaaatg 19351485  T
Q  246 atggttataaggtggt 261  Q
    |   ||||||||||||    
T  19351484 acacttataaggtggt 19351469  T

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Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 378 - 444
Target Start/End: Original strand, 19721769 - 19721835
Alignment:
Q  378 attgtcatccatttgcgagtcatggtgcgtatgtgagtggcactattaactggttggctattcgaaa 444  Q
    ||||||||||||||| || | ||||||  |||||||| |||||||||||||||||||||||||||||    
T  19721769 attgtcatccatttgtgaataatggtgtttatgtgagcggcactattaactggttggctattcgaaa 19721835  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 357
Target Start/End: Original strand, 19357587 - 19357634
Alignment:
Q  310 tgataatgtttggagagatattcctacttttcccgttgttccttttgg 357  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  19357587 tgataatgcttggagagatattccaacttttcccattgttccttttgg 19357634  T

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Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 19779351 - 19779418
Alignment:
Q  379 ttgtcatccatttgcgagtcatggtgcgtatgtgagtggcactattaactggttggctattcgaaata 446  Q
    ||||||||||| || || | ||||||  ||||||||||||||||||||||||||| |||||| |||||    
T  19779351 ttgtcatccatatgtgaataatggtgtttatgtgagtggcactattaactggttgactattcaaaata 19779418  T

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Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 19888032 - 19887965
Alignment:
Q  379 ttgtcatccatttgcgagtcatggtgcgtatgtgagtggcactattaactggttggctattcgaaata 446  Q
    ||||||||||| || || | ||||||  ||||||||||||||||||||||||||| |||||| |||||    
T  19888032 ttgtcatccatatgtgaataatggtgtttatgtgagtggcactattaactggttgactattcaaaata 19887965  T

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Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 19351370 - 19351321
Alignment:
Q  399 atggtgcgtatgtgagtggcactattaactggttggctattcgaaatatt 448  Q
    |||||| ||||||||||||  ||||||||||||||||||||| |||||||    
T  19351370 atggtgtgtatgtgagtggatctattaactggttggctattcaaaatatt 19351321  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 19779266 - 19779334
Alignment:
Q  288 aggtaaaagttttctgcttgactgataatgtttggagagatattcctacttttcccgttgttccttttg 356  Q
    |||| ||| ||||| | |||| ||||||| |||||||||||||||| | ||||||| ||||||||||||    
T  19779266 aggtcaaaattttcagtttgagtgataatatttggagagatattccaagttttcccattgttccttttg 19779334  T

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Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 356
Target Start/End: Complemental strand, 19888100 - 19888049
Alignment:
Q  305 ttgactgataatgtttggagagatattcctacttttcccgttgttccttttg 356  Q
    |||| ||||||| |||||||||||||||| | ||||||| ||||||||||||    
T  19888100 ttgagtgataatatttggagagatattccgaattttcccattgttccttttg 19888049  T

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Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 18953205 - 18953167
Alignment:
Q  406 gtatgtgagtggcactattaactggttggctattcgaaa 444  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  18953205 gtatgtgagtggcactgttaactggttggccattcgaaa 18953167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 18983252 - 18983214
Alignment:
Q  406 gtatgtgagtggcactattaactggttggctattcgaaa 444  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  18983252 gtatgtgagtggcactgttaactggttggccattcgaaa 18983214  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 19888363 - 19888299
Alignment:
Q  30 atgatccttattaccgattgagtaatatggattgctgtgatatcgttggttcctgtaatggattg 94  Q
    |||||||||| |||  |||| ||||||||||||| |||   ||| ||||||||||||||||||||    
T  19888363 atgatccttactacgtattgggtaatatggattgttgtatcatcattggttcctgtaatggattg 19888299  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 21219359 - 21219291
Alignment:
Q  41 taccgattgagtaatatggattgctgtgatatcgttggttcctgtaatggattgatatgtttgcgcggt 109  Q
    |||||||||| | ||| |||||| |||||  | ||||||||||| ||||||||| | ||||||||||||    
T  21219359 taccgattgaatgataaggattgttgtgaagttgttggttcctgcaatggattggtctgtttgcgcggt 21219291  T

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Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 401 - 570
Target Start/End: Complemental strand, 18909108 - 18908948
Alignment:
Q  401 ggtgcgtatgtgagtggcactattaactggttggctattcgaaatattcgaaatatgaatgaatatgaatggaatgatatttcaatcaaccaatttgtga 500  Q
    |||| ||||||||||||  |||||||||||||||||||         |||| ||| || |||||||||||||||||||||| | ||||| ||||||||||    
T  18909108 ggtgtgtatgtgagtggttctattaactggttggctat---------tcgagataagactgaatatgaatggaatgatattactatcaaacaatttgtga 18909018  T
Q  501 tcttatcacttgttctggctacagagacattcaggcagttgctgccacccaacggttttgttgaagtacc 570  Q
    |  | || |||| | ||| |||||||||||   |||| ||||||||||| | ||||||||||||||||||    
T  18909017 tagtctcgcttgatttggatacagagacatatcggcaattgctgccacctagcggttttgttgaagtacc 18908948  T

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Target: chr2; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 447 - 570
Target Start/End: Complemental strand, 18921027 - 18920904
Alignment:
Q  447 ttcgaaatatgaatgaatatgaatggaatgatatttcaatcaaccaatttgtgatcttatcacttgttctggctacagagacattcaggcagttgctgcc 546  Q
    ||||| ||| || |||||||||||||||||||||| | ||||| |||||||||||  | || |||| | ||| |||||||||||   |||| ||||||||    
T  18921027 ttcgagataagactgaatatgaatggaatgatattactatcaaacaatttgtgatagtctcgcttgatttggttacagagacatatcggcaattgctgcc 18920928  T
Q  547 acccaacggttttgttgaagtacc 570  Q
    ||| | ||||||||||||||||||    
T  18920927 acctagcggttttgttgaagtacc 18920904  T

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Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 18914203 - 18914119
Alignment:
Q  21 ccattctcaatgatccttattaccgattgagtaatatggattgctgtgatatcgttggttcctgtaatggattgatatgtttgcg 105  Q
    |||||| |||||||||||||||||  ||||||||||||||||| | | | || ||||||||||| ||||||||||| ||||||||    
T  18914203 ccattcacaatgatccttattaccttttgagtaatatggattgttatcaaatagttggttcctgcaatggattgatttgtttgcg 18914119  T

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Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 18921381 - 18921309
Alignment:
Q  33 atccttattaccgattgagtaatatggattgctgtgatatcgttggttcctgtaatggattgatatgtttgcg 105  Q
    ||||||||||||  ||||||||||||||||||  | || || |||||||||| ||||||||||| ||||||||    
T  18921381 atccttattaccttttgagtaatatggattgcgatcatgtcattggttcctgcaatggattgatttgtttgcg 18921309  T

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Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 18914093 - 18914050
Alignment:
Q  146 tggttccgtctctggaacccagccacaaatacattatctgaaaa 189  Q
    ||||||||| | |||||||||||||||||| |||||||||||||    
T  18914093 tggttccgtttatggaacccagccacaaattcattatctgaaaa 18914050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 447
Target Start/End: Complemental strand, 18913856 - 18913810
Alignment:
Q  401 ggtgcgtatgtgagtggcactattaactggttggctattcgaaatat 447  Q
    |||| |||||||||||| || ||||||||||||||||||||| ||||    
T  18913856 ggtgtgtatgtgagtggaacaattaactggttggctattcgagatat 18913810  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 18909459 - 18909386
Alignment:
Q  23 attctcaatgatccttattaccgattgagtaatatggattgctgtgatatcgttggttcctgtaatggattgat 96  Q
    |||| ||||||||||| ||||  |||| ||||||||||||||  | | || |||||||| ||||||||||||||    
T  18909459 attcccaatgatccttgttacatattgcgtaatatggattgcaatcacattgttggttcttgtaatggattgat 18909386  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 288 - 361
Target Start/End: Original strand, 14749057 - 14749131
Alignment:
Q  288 aggtaaaagttttctgcttgactgataatgtttgg-agagatattcctacttttcccgttgttccttttggcctc 361  Q
    |||| ||||||||| | || | ||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  14749057 aggtcaaagttttcagtttaagtgataatgtttgggagagatattcctacttttcccgttgttccttttgacctc 14749131  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 14748805 - 14748886
Alignment:
Q  21 ccattctcaatgatccttattaccgattgagtaatatggattgctgtgatatcgttggttcctgtaatggattgatatgttt 102  Q
    |||||| ||| |||||||| ||||  |||||||||||||||||| ||   || ||||||||||| ||||||||||| |||||    
T  14748805 ccattcccaacgatccttactaccttttgagtaatatggattgcagtttcatggttggttcctgcaatggattgatctgttt 14748886  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 446
Target Start/End: Original strand, 14749173 - 14749213
Alignment:
Q  406 gtatgtgagtggcactattaactggttggctattcgaaata 446  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  14749173 gtatgtgagtggcagtattaactggttggctattcaaaata 14749213  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 104
Target Start/End: Complemental strand, 28764525 - 28764495
Alignment:
Q  74 gttggttcctgtaatggattgatatgtttgc 104  Q
    |||||||||||||||||||||||||||||||    
T  28764525 gttggttcctgtaatggattgatatgtttgc 28764495  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 28764198 - 28764166
Alignment:
Q  413 agtggcactattaactggttggctattcgaaat 445  Q
    |||||||||||||||||||||||||||| ||||    
T  28764198 agtggcactattaactggttggctattcaaaat 28764166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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