View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7768_low_35 (Length: 269)
Name: NF7768_low_35
Description: NF7768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7768_low_35 |
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Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 18 - 245
Target Start/End: Original strand, 38753288 - 38753515
Alignment:
| Q |
18 |
ctaagcaacaattgatgcaagaacagcaccaaagtcaaagtaattttcttccaactggcttggaggtctctgattatggtttgcatatgaataatgattt |
117 |
Q |
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| T |
38753288 |
ctaagcaacaattgatgcaagaacagcaccaaagtcaaagtaattttcttccaactggcttggaggtctctgattatggtttgcatatgaataatgattt |
38753387 |
T |
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| Q |
118 |
gtccaatgttttatatatgtgatgaaaatttctataaaggattaatcaagtatatgcaataaccccatagagttgtatcatatagctatcttaggaaata |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
38753388 |
gtccaatgttttatatatgtgatgaaaatttctataaaggattaatcaagtatatgcaataactccatagagttgtatcatatagctatcttaggaaata |
38753487 |
T |
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| Q |
218 |
aaataaattcttctccatttaaaggctg |
245 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
38753488 |
aaataaattcttctccatttaaaggctg |
38753515 |
T |
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