View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7768_low_60 (Length: 217)

Name: NF7768_low_60
Description: NF7768
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7768_low_60
NF7768_low_60
[»] chr2 (40 HSPs)
chr2 (1-175)||(44204123-44204308)
chr2 (26-66)||(33150090-33150130)
chr2 (26-66)||(42955118-42955158)
chr2 (26-88)||(15178086-15178148)
chr2 (26-90)||(36490564-36490625)
chr2 (29-89)||(38532442-38532499)
chr2 (29-66)||(20128759-20128796)
chr2 (25-66)||(34240839-34240880)
chr2 (26-66)||(2795395-2795435)
chr2 (26-66)||(4898180-4898220)
chr2 (26-66)||(4945574-4945614)
chr2 (26-66)||(5205005-5205045)
chr2 (26-66)||(8554686-8554726)
chr2 (26-66)||(9157989-9158029)
chr2 (26-66)||(9709673-9709713)
chr2 (26-66)||(12017774-12017814)
chr2 (26-66)||(14937648-14937688)
chr2 (26-66)||(17843966-17844006)
chr2 (26-66)||(20195304-20195344)
chr2 (26-66)||(24971220-24971260)
chr2 (26-66)||(24971290-24971330)
chr2 (26-66)||(26567651-26567691)
chr2 (26-66)||(27327915-27327955)
chr2 (26-66)||(29573829-29573869)
chr2 (26-66)||(29771733-29771773)
chr2 (26-66)||(30202499-30202539)
chr2 (26-66)||(32473486-32473526)
chr2 (26-66)||(34911113-34911153)
chr2 (26-66)||(34911183-34911223)
chr2 (26-66)||(35607430-35607470)
chr2 (22-66)||(37131753-37131797)
chr2 (26-66)||(37486084-37486124)
chr2 (26-66)||(38262007-38262047)
chr2 (22-66)||(38721464-38721508)
chr2 (26-66)||(40340554-40340594)
chr2 (26-66)||(40739507-40739547)
chr2 (26-66)||(42142026-42142066)
chr2 (26-66)||(42230537-42230577)
chr2 (26-66)||(42579104-42579144)
chr2 (26-66)||(43514841-43514881)
[»] scaffold0531 (1 HSPs)
scaffold0531 (22-88)||(7002-7065)
[»] chr8 (27 HSPs)
chr8 (26-66)||(44838789-44838829)
chr8 (26-66)||(1875703-1875743)
chr8 (26-66)||(9578453-9578493)
chr8 (26-66)||(34194575-34194615)
chr8 (26-66)||(39655432-39655472)
chr8 (26-66)||(40716761-40716801)
chr8 (26-66)||(41178043-41178083)
chr8 (26-66)||(42631794-42631834)
chr8 (26-66)||(43483947-43483987)
chr8 (26-68)||(13832021-13832063)
chr8 (22-59)||(29110286-29110323)
chr8 (26-59)||(29110348-29110381)
chr8 (29-66)||(32484956-32484993)
chr8 (26-59)||(35972393-35972426)
chr8 (26-66)||(5040083-5040123)
chr8 (26-66)||(10150884-10150924)
chr8 (26-66)||(17116492-17116532)
chr8 (26-66)||(32480281-32480321)
chr8 (26-66)||(34194645-34194685)
chr8 (26-66)||(37922827-37922867)
chr8 (26-66)||(37922897-37922937)
chr8 (26-66)||(38884031-38884071)
chr8 (26-66)||(39655502-39655542)
chr8 (26-66)||(41177973-41178013)
chr8 (26-66)||(43484017-43484057)
chr8 (26-66)||(44282280-44282320)
chr8 (26-66)||(44282350-44282390)
[»] chr5 (33 HSPs)
chr5 (26-88)||(27990442-27990501)
chr5 (26-66)||(20361992-20362032)
chr5 (26-66)||(23117563-23117603)
chr5 (26-66)||(24433550-24433590)
chr5 (26-66)||(29807093-29807133)
chr5 (26-66)||(39126099-39126139)
chr5 (26-66)||(39602989-39603029)
chr5 (29-66)||(25257159-25257196)
chr5 (29-66)||(25320949-25320986)
chr5 (29-66)||(29807164-29807201)
chr5 (26-66)||(1723328-1723368)
chr5 (26-66)||(3161311-3161351)
chr5 (26-66)||(7336940-7336980)
chr5 (26-66)||(7581470-7581510)
chr5 (26-66)||(8409634-8409674)
chr5 (26-88)||(9985006-9985065)
chr5 (26-66)||(14416421-14416461)
chr5 (26-66)||(14571023-14571063)
chr5 (26-66)||(15966041-15966081)
chr5 (26-66)||(19784549-19784589)
chr5 (26-66)||(19784608-19784648)
chr5 (26-66)||(20367323-20367363)
chr5 (26-66)||(21344534-21344574)
chr5 (26-66)||(22584317-22584357)
chr5 (26-66)||(25596499-25596539)
chr5 (26-66)||(26168273-26168313)
chr5 (26-66)||(32067997-32068037)
chr5 (26-66)||(33696740-33696780)
chr5 (26-66)||(35067934-35067974)
chr5 (26-66)||(35245606-35245646)
chr5 (26-66)||(35245693-35245733)
chr5 (26-66)||(36137030-36137070)
chr5 (22-66)||(43340496-43340540)
[»] chr4 (47 HSPs)
chr4 (26-66)||(11583792-11583832)
chr4 (26-66)||(17659550-17659590)
chr4 (26-66)||(26206609-26206649)
chr4 (26-66)||(39754114-39754154)
chr4 (26-66)||(44639831-44639871)
chr4 (26-66)||(50038465-50038505)
chr4 (26-66)||(50045687-50045727)
chr4 (26-66)||(50519347-50519387)
chr4 (29-90)||(55131624-55131682)
chr4 (28-66)||(16391262-16391300)
chr4 (28-66)||(16391761-16391799)
chr4 (26-89)||(53019221-53019281)
chr4 (26-66)||(12721660-12721700)
chr4 (26-66)||(12721731-12721771)
chr4 (26-66)||(13743873-13743913)
chr4 (26-66)||(13743943-13743983)
chr4 (26-66)||(15133919-15133959)
chr4 (26-66)||(15185910-15185950)
chr4 (26-66)||(16450174-16450214)
chr4 (26-66)||(17659480-17659520)
chr4 (26-66)||(19754230-19754270)
chr4 (26-66)||(19785536-19785576)
chr4 (26-66)||(23511877-23511917)
chr4 (26-66)||(23511961-23512001)
chr4 (26-66)||(23754277-23754317)
chr4 (26-66)||(25856095-25856135)
chr4 (26-66)||(30051358-30051398)
chr4 (26-66)||(30051428-30051468)
chr4 (26-66)||(30162696-30162736)
chr4 (26-66)||(30279225-30279265)
chr4 (26-66)||(34166127-34166167)
chr4 (26-66)||(34459070-34459110)
chr4 (26-66)||(43635851-43635891)
chr4 (26-66)||(43635921-43635961)
chr4 (26-66)||(44551283-44551323)
chr4 (26-66)||(44639761-44639801)
chr4 (26-66)||(45890937-45890977)
chr4 (26-66)||(48042676-48042716)
chr4 (26-66)||(48079531-48079571)
chr4 (26-66)||(49573894-49573934)
chr4 (27-67)||(50533140-50533180)
chr4 (26-66)||(51126120-51126160)
chr4 (26-66)||(51126190-51126230)
chr4 (26-66)||(53019151-53019191)
chr4 (26-66)||(53176696-53176736)
chr4 (26-66)||(55131551-55131591)
chr4 (26-66)||(56420516-56420556)
[»] chr3 (35 HSPs)
chr3 (26-66)||(32589330-32589370)
chr3 (28-66)||(49562050-49562088)
chr3 (21-66)||(32814708-32814753)
chr3 (26-63)||(34935623-34935660)
chr3 (29-66)||(54690526-54690563)
chr3 (22-66)||(7672774-7672818)
chr3 (26-66)||(16894255-16894295)
chr3 (21-65)||(20821457-20821501)
chr3 (26-66)||(24599964-24600004)
chr3 (26-66)||(29076610-29076650)
chr3 (26-66)||(42595822-42595862)
chr3 (26-66)||(43898108-43898148)
chr3 (29-66)||(12569190-12569227)
chr3 (29-66)||(13545654-13545691)
chr3 (21-66)||(23317031-23317076)
chr3 (26-66)||(7672708-7672748)
chr3 (26-66)||(14626713-14626753)
chr3 (26-66)||(17005045-17005085)
chr3 (26-66)||(17501490-17501530)
chr3 (26-66)||(18480961-18481001)
chr3 (26-66)||(25995627-25995667)
chr3 (26-66)||(26770806-26770846)
chr3 (26-66)||(32146479-32146519)
chr3 (26-66)||(34205578-34205618)
chr3 (26-66)||(34935553-34935593)
chr3 (26-66)||(40326523-40326563)
chr3 (26-66)||(44435259-44435299)
chr3 (26-66)||(44544173-44544213)
chr3 (30-66)||(46151037-46151073)
chr3 (26-66)||(47931774-47931814)
chr3 (26-66)||(50623121-50623161)
chr3 (26-66)||(51486441-51486481)
chr3 (26-66)||(51760184-51760224)
chr3 (26-66)||(53717982-53718022)
chr3 (26-66)||(54690453-54690493)
[»] chr1 (46 HSPs)
chr1 (26-66)||(21909926-21909966)
chr1 (29-66)||(48376893-48376930)
chr1 (26-66)||(3160765-3160805)
chr1 (26-66)||(3606276-3606316)
chr1 (26-66)||(4682952-4682992)
chr1 (26-66)||(12447469-12447509)
chr1 (26-66)||(12993636-12993676)
chr1 (26-66)||(34598947-34598987)
chr1 (26-66)||(37255141-37255181)
chr1 (26-66)||(39181064-39181104)
chr1 (26-66)||(42140415-42140455)
chr1 (26-66)||(48605155-48605195)
chr1 (21-90)||(50998298-50998364)
chr1 (28-66)||(3160837-3160875)
chr1 (28-66)||(31634479-31634517)
chr1 (29-66)||(15013672-15013709)
chr1 (29-66)||(33324133-33324170)
chr1 (26-89)||(39015558-39015618)
chr1 (26-66)||(435221-435261)
chr1 (26-66)||(2091761-2091801)
chr1 (26-66)||(4974130-4974170)
chr1 (26-66)||(5852703-5852743)
chr1 (26-66)||(6763419-6763459)
chr1 (26-66)||(7230024-7230064)
chr1 (26-66)||(11343748-11343788)
chr1 (26-66)||(11501768-11501808)
chr1 (26-66)||(16426923-16426963)
chr1 (26-66)||(17988237-17988277)
chr1 (26-66)||(21852452-21852492)
chr1 (26-66)||(21909856-21909896)
chr1 (26-66)||(25378272-25378312)
chr1 (22-66)||(26059200-26059244)
chr1 (26-66)||(26660659-26660699)
chr1 (26-66)||(27549130-27549170)
chr1 (26-66)||(31909764-31909804)
chr1 (26-66)||(34062028-34062068)
chr1 (26-66)||(37215187-37215227)
chr1 (26-66)||(39181136-39181176)
chr1 (26-66)||(40328957-40328997)
chr1 (26-66)||(46518030-46518070)
chr1 (26-66)||(47011329-47011369)
chr1 (26-66)||(47599922-47599962)
chr1 (26-66)||(47991792-47991832)
chr1 (26-66)||(48605085-48605125)
chr1 (26-66)||(52253553-52253593)
chr1 (26-66)||(52880000-52880040)
[»] chr6 (17 HSPs)
chr6 (22-59)||(8029438-8029475)
chr6 (26-66)||(13397431-13397471)
chr6 (26-66)||(1858362-1858402)
chr6 (26-66)||(3750286-3750326)
chr6 (26-66)||(5433416-5433456)
chr6 (26-66)||(7418890-7418930)
chr6 (26-66)||(9908221-9908261)
chr6 (26-66)||(10644279-10644319)
chr6 (26-66)||(10731558-10731598)
chr6 (26-66)||(11989161-11989201)
chr6 (26-66)||(11989227-11989267)
chr6 (26-66)||(19687482-19687522)
chr6 (26-66)||(21478568-21478608)
chr6 (26-66)||(29938365-29938405)
chr6 (26-66)||(32786131-32786171)
chr6 (26-66)||(32786201-32786241)
chr6 (26-66)||(33169267-33169307)
[»] scaffold0013 (1 HSPs)
scaffold0013 (26-66)||(58385-58425)
[»] chr7 (40 HSPs)
chr7 (26-66)||(3498309-3498349)
chr7 (26-66)||(11032318-11032358)
chr7 (26-66)||(25099551-25099591)
chr7 (26-88)||(27234943-27235002)
chr7 (26-66)||(45833275-45833315)
chr7 (26-66)||(46658817-46658857)
chr7 (26-69)||(9140233-9140276)
chr7 (26-65)||(27942341-27942380)
chr7 (26-64)||(46578282-46578320)
chr7 (26-59)||(27042185-27042218)
chr7 (26-63)||(31365653-31365690)
chr7 (26-89)||(35160744-35160804)
chr7 (26-66)||(3341905-3341945)
chr7 (26-66)||(7344922-7344962)
chr7 (26-66)||(7344983-7345023)
chr7 (26-66)||(8379152-8379192)
chr7 (26-66)||(9503981-9504021)
chr7 (26-66)||(14206415-14206455)
chr7 (26-66)||(14215105-14215145)
chr7 (26-66)||(18941349-18941389)
chr7 (26-66)||(18941396-18941436)
chr7 (26-66)||(19531968-19532008)
chr7 (26-66)||(19532038-19532078)
chr7 (26-66)||(20353072-20353112)
chr7 (26-66)||(20353162-20353202)
chr7 (26-66)||(27234873-27234913)
chr7 (26-66)||(28003263-28003303)
chr7 (26-66)||(30005961-30006001)
chr7 (26-66)||(31669810-31669850)
chr7 (26-66)||(33471505-33471545)
chr7 (26-66)||(35593656-35593696)
chr7 (26-66)||(37066197-37066237)
chr7 (26-66)||(37066267-37066307)
chr7 (26-66)||(39976059-39976099)
chr7 (26-66)||(40116155-40116195)
chr7 (26-66)||(43232950-43232990)
chr7 (26-66)||(46477148-46477188)
chr7 (26-66)||(46578350-46578390)
chr7 (26-66)||(46658747-46658787)
chr7 (26-66)||(48135481-48135521)
[»] scaffold0340 (2 HSPs)
scaffold0340 (26-65)||(14049-14088)
scaffold0340 (26-66)||(14118-14158)
[»] scaffold0236 (1 HSPs)
scaffold0236 (26-89)||(13691-13750)
[»] scaffold0223 (1 HSPs)
scaffold0223 (29-66)||(26665-26702)
[»] scaffold0111 (1 HSPs)
scaffold0111 (26-66)||(38092-38132)
[»] scaffold0011 (1 HSPs)
scaffold0011 (26-66)||(264-304)


Alignment Details
Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 44204308 - 44204123
Alignment:
Q  1 tatatatgggccataatatgaa-----taaatcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagtattacata 95  Q
    ||||||||| ||||||||||||     || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  44204308 tatatatggtccataatatgaaccatatacatcattaattgaaaaaatctaaaaagtcaaatttgcttatactaattagcaacggatggaatattacata 44204209  T
Q  96 ta------tatagagttaggattcaaacctcggacacccatttattaaacttnnnnnnntaaatttatagtattgtactgcttgat 175  Q
    ||      |||||||||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||| ||||||    
T  44204208 tatatatatatagagttaggattcaaacctcggacacccatttattaatcttaaaaaaataaatttatagtattgtactacttgat 44204123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 33150130 - 33150090
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  33150130 atcattaattgaataaacctaaaaagtaaaatttgcttata 33150090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 42955118 - 42955158
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  42955118 atcattaattgaataaatctaaaatgtcaaaattgcttata 42955158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 15178086 - 15178148
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagta 88  Q
    |||||||||||||||||| |||||  | |||||||||||||||| |||  |||||| ||||||    
T  15178086 atcattaattgaataaatttaaaagttaaaatttgcttatactatttaaaaacggagggagta 15178148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 36490564 - 36490625
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagtatt 90  Q
    |||||||||||||| || ||||||||| |||||||||||   || |||| |||||||||||||||    
T  36490564 atcattaattgaatgaacctaaaaagtaaaatttgctta---tatttagaaacggatggagtatt 36490625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 38532499 - 38532442
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagtat 89  Q
    ||||||||||| |||||||||||| || ||||||||   ||||||| ||||||||||||||    
T  38532499 attaattgaatcaatctaaaaagttaattttgctta---taattagtaacggatggagtat 38532442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 20128796 - 20128759
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  20128796 attaattgaataaatctaaaaagtaaaatttgattata 20128759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 34240880 - 34240839
Alignment:
Q  25 aatcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||| || |||||| ||||||||||||||||    
T  34240880 aatcattaattgaatgaacctaaaatgtcaaatttgcttata 34240839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 2795395 - 2795435
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  2795395 atcattaattgaatgaacctaaaaagtaaaatttgcttata 2795435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 4898220 - 4898180
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  4898220 atcattaattgaatgaacctaaaaagtaaaatttgcttata 4898180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 4945614 - 4945574
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  4945614 atcattaattgaatgaacctaaaaagtaaaatttgcttata 4945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 5205005 - 5205045
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  5205005 atcattaattgaatgaacctaaaaagtcaaatttacttata 5205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 8554726 - 8554686
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||| ||| |||||||||||| |||||||||||||    
T  8554726 atcattaattaaatgaatctaaaaagtaaaatttgcttata 8554686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 9158029 - 9157989
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||  |||||||||||| |||||||||||||    
T  9158029 atcattaattgaaagaatctaaaaagtaaaatttgcttata 9157989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 9709713 - 9709673
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  9709713 atcattaattgaattaacctaaaaagtaaaatttgcttata 9709673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 12017814 - 12017774
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| ||||||||||||||| ||||||||||    
T  12017814 atcattaaatgaatgaatctaaaaagtcaattttgcttata 12017774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 14937688 - 14937648
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| ||||||||||||||| ||||||||||    
T  14937688 atcattaaatgaatgaatctaaaaagtcaattttgcttata 14937648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 17844006 - 17843966
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  17844006 atcattaattgaatgaacctaaaaagtaaaatttgcttata 17843966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 20195344 - 20195304
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||| ||||||    
T  20195344 atcattaattgaatgaatctaaaaagtaaaatttacttata 20195304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 24971260 - 24971220
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||| |||||| |||||||||||| |||||||||||||    
T  24971260 atcattagttgaatgaatctaaaaagtaaaatttgcttata 24971220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 24971290 - 24971330
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  24971290 atcattaattgaatgaacctaaaaagtaaaatttgcttata 24971330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 26567691 - 26567651
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  26567691 atcattaattgaatgaacctaaaaagtaaaatttgcttata 26567651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 27327915 - 27327955
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||| |||||||||||||||    
T  27327915 atcattaattgaatgaacctaaaaaatcaaatttgcttata 27327955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 29573869 - 29573829
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||| ||| ||||||||||||||| ||||||||||    
T  29573869 atcattaatttaatgaatctaaaaagtcaattttgcttata 29573829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 29771773 - 29771733
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| ||||||| |||||    
T  29771773 atcattaattgaatgaatctaaaaagtaaaatttgtttata 29771733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 30202539 - 30202499
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||| ||||||| || |||||||||||||||||||||||    
T  30202539 atcattgattgaatgaacctaaaaagtcaaatttgcttata 30202499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 32473526 - 32473486
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||| | |||||||||||||    
T  32473526 atcattaattgaatgaatctaaaaaataaaatttgcttata 32473486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 34911153 - 34911113
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||| ||||||| | |||||||||||||    
T  34911153 atcattaattgaataaacctaaaaaataaaatttgcttata 34911113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 34911183 - 34911223
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  34911183 atcattaattgaatgaacctaaaaagtaaaatttgcttata 34911223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 35607470 - 35607430
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  35607470 atcattaattgaatgaacctaaaaagtcaaatttacttata 35607430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 37131753 - 37131797
Alignment:
Q  22 ataaatcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||| ||| ||||| || |||||||||||||    
T  37131753 ataaatcattaattgaatgaatataaaacgtaaaatttgcttata 37131797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 37486084 - 37486124
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  37486084 atcattaattgaatgaacctaaaaagtaaaatttgcttata 37486124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 38262047 - 38262007
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  38262047 atcattaattgaatgaacctaaaaagtcaaatttacttata 38262007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 38721464 - 38721508
Alignment:
Q  22 ataaatcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||| ||||||||||| ||| ||||||||||| ||||||||||    
T  38721464 ataaattattaattgaatgaatttaaaaagtcaattttgcttata 38721508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 40340554 - 40340594
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  40340554 atcattaattgaatgaacctaaaaagtaaaatttgcttata 40340594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 40739547 - 40739507
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  40739547 atcattaattgaatgaacctaaaaagtaaaatttgcttata 40739507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 42142026 - 42142066
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  42142026 atcattaattgaatgaacctaaaaagtcaaatttacttata 42142066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 42230577 - 42230537
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| ||||||||||||||| ||||||||||    
T  42230577 atcattaaatgaatgaatctaaaaagtcaattttgcttata 42230537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 42579104 - 42579144
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||| ||||||    
T  42579104 atcattaattgaatgaatctaaaaagtaaaatttacttata 42579144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 43514841 - 43514881
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  43514841 atcattaattgaatgaacctaaaaagtaaaatttgcttata 43514881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0531 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 7065 - 7002
Alignment:
Q  22 ataaatcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagta 88  Q
    |||||||||||||||||| ||||||||||||||||||||||||   ||||||| |||||||||||||    
T  7065 ataaatcattaattgaatgaatctaaaaagtcaaatttgctta---taattagtaacggatggagta 7002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 44838829 - 44838789
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  44838829 atcattaattgaataaatctaaaaagtcaattttgcttata 44838789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 1875743 - 1875703
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  1875743 atcattaattgaatgaacctaaaaagtcaaatttgcttata 1875703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 9578493 - 9578453
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  9578493 atcattaattgaataaacctaaaaagtaaaatttgcttata 9578453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 34194615 - 34194575
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  34194615 atcattaattgaatgaatctaaaaagtaaaatttgcttata 34194575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 39655472 - 39655432
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  39655472 atcattaattgaatgaacctaaaaagtcaaatttgcttata 39655432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 40716801 - 40716761
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  40716801 atcattaattgaatgaatctaaaaagtaaaatttgcttata 40716761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 41178043 - 41178083
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  41178043 atcattaattgaatgaatctaaaaagtcaaatttgtttata 41178083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 42631834 - 42631794
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  42631834 atcattaattgaatgaatctaaaaagtaaaatttgcttata 42631794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 43483987 - 43483947
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  43483987 atcattaattgaatgaatctaaaaagtgaaatttgcttata 43483947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 13832063 - 13832021
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttatact 68  Q
    |||||||||||||| |||| ||||||||||||||| |||||||    
T  13832063 atcattaattgaatgaatcaaaaaagtcaaatttgtttatact 13832021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 29110323 - 29110286
Alignment:
Q  22 ataaatcattaattgaataaatctaaaaagtcaaattt 59  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  29110323 ataaatcattaattgaataaacctaaaaagtaaaattt 29110286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 29110348 - 29110381
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaattt 59  Q
    ||||||||||||||||||||||||||| ||||||    
T  29110348 atcattaattgaataaatctaaaaagtaaaattt 29110381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 32484993 - 32484956
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  32484993 attaattgaatgaatctaaaaagtaaaatttgcttata 32484956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 35972426 - 35972393
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaattt 59  Q
    |||||||||||||| |||||||||||||||||||    
T  35972426 atcattaattgaatgaatctaaaaagtcaaattt 35972393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 5040123 - 5040083
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||||||||| ||||||||| ||||||    
T  5040123 atcattaattgaatgaatctaaaatgtcaaatttacttata 5040083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 10150924 - 10150884
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  10150924 atcattaattgaatgaacctaaaaagtcaaatttacttata 10150884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 17116532 - 17116492
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||| |||||||||||||||||||    
T  17116532 atcattaattgaatgaacctataaagtcaaatttgcttata 17116492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 32480281 - 32480321
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  32480281 atcattaattgaatgaacctaaaaagtaaaatttgcttata 32480321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 34194645 - 34194685
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  34194645 atcattaattgaatgaacctaaaaagtaaaatttgcttata 34194685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 37922867 - 37922827
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  37922867 atcattaattgaatgaacctaaaaagtaaaatttgcttata 37922827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 37922897 - 37922937
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  37922897 atcattaattgaatgaacctaaaaagtaaaatttgcttata 37922937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 38884031 - 38884071
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  38884031 atcattaattgaatgaacctaaaaagtaaaatttgcttata 38884071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 39655502 - 39655542
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||  ||||||||||||||||||||||    
T  39655502 atcattaattgaatgaacataaaaagtcaaatttgcttata 39655542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 41178013 - 41177973
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  41178013 atcattaattgaatgaacctaaaaagtcaaatttacttata 41177973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 43484017 - 43484057
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  43484017 atcattaattgaatgaacctaaaaagtaaaatttgcttata 43484057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 44282320 - 44282280
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||| |||||||||||||||||    
T  44282320 atcattaattgaatgaacctaaagagtcaaatttgcttata 44282280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 44282350 - 44282390
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||| | |||||||||||||    
T  44282350 atcattaattgaatgaatctaaaaaattaaatttgcttata 44282390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 27990442 - 27990501
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagta 88  Q
    |||||||||||||| || ||||||||| |||||||||||   |||||||||||||||||||||    
T  27990442 atcattaattgaatgaacctaaaaagtgaaatttgctta---taattagcaacggatggagta 27990501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 20362032 - 20361992
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  20362032 atcattaattgaatgaatctaaaaagtaaaatttgcttata 20361992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 23117563 - 23117603
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||||||||||||||||||| ||||||||||    
T  23117563 atcattaactgaataaatctaaaaagtcaattttgcttata 23117603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 24433590 - 24433550
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  24433590 atcattaattcaataaatctaaaaagtaaaatttgcttata 24433550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 29807133 - 29807093
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  29807133 atcattaattgaatgaatctaaaaagtaaaatttgcttata 29807093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 39126099 - 39126139
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  39126099 atcattaattgaatgaatctaaaaagtaaaatttgcttata 39126139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 39602989 - 39603029
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  39602989 atcattaattgaataaacctaaaaagtaaaatttgcttata 39603029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 25257159 - 25257196
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  25257159 attaattgaatgaatctaaaaagtcaaatttacttata 25257196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 25320949 - 25320986
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  25320949 attaattgaatgaatctaaaaagtcaaatttacttata 25320986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 29807164 - 29807201
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  29807164 attaattgaatgaatctaaaaagtaaaatttgcttata 29807201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 1723328 - 1723368
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  1723328 atcattaattgaatgaacctaaaaagtaaaatttgcttata 1723368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 3161311 - 3161351
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  3161311 atcattaattgaatgaacctaaaaagtaaaatttgcttata 3161351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 7336940 - 7336980
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  7336940 atcattaattgaatgaacctaaaaagtaaaatttgcttata 7336980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 7581470 - 7581510
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||| ||||||| | |||||||||||||    
T  7581470 atcattaattgaataaacctaaaaattaaaatttgcttata 7581510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 8409674 - 8409634
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||| ||||||    
T  8409674 atcattaattgaatgaatctaaaaagtaaaatttacttata 8409634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 9985006 - 9985065
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagta 88  Q
    ||||||| |||||| |||||||||| |||||||| ||||||   ||||| |||||||||||||    
T  9985006 atcattagttgaatgaatctaaaaaatcaaatttacttata---attagaaacggatggagta 9985065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 14416461 - 14416421
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||| | |||||||||||||    
T  14416461 atcattaattgaatgaatctaaaaaataaaatttgcttata 14416421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 14571063 - 14571023
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||| | |||||||||||||    
T  14571063 atcattaattgaatgaatctaaaaaataaaatttgcttata 14571023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 15966041 - 15966081
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  15966041 atcattaattgaatgaacctaaaaagtaaaatttgcttata 15966081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 19784589 - 19784549
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  19784589 atcattaattgaatgaacctaaaaagtaaaatttgcttata 19784549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 19784608 - 19784648
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  19784608 atcattaattgaatgaacctaaaaagtaaaatttgcttata 19784648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 20367363 - 20367323
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| ||||||| |||||    
T  20367363 atcattaattgaatgaatctaaaaagtaaaatttgtttata 20367323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 21344534 - 21344574
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| ||||||||||||||| ||||||||||    
T  21344534 atcattaaatgaatgaatctaaaaagtcaattttgcttata 21344574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 22584317 - 22584357
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  22584317 atcattaattgaatgaacctaaaaagtaaaatttgcttata 22584357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 25596499 - 25596539
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||| |||| |||||||||||| |||||||||||||    
T  25596499 atcattaatagaatgaatctaaaaagttaaatttgcttata 25596539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 26168273 - 26168313
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  26168273 atcattaattgaatgaacctaaaaagtaaaatttgcttata 26168313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 32067997 - 32068037
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||| |||||||| |||||||||||||    
T  32067997 atcattaattgaatgaatttaaaaagttaaatttgcttata 32068037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 33696740 - 33696780
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  33696740 atcattaattgaatgaacctaaaaagtaaaatttgcttata 33696780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 35067974 - 35067934
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  35067974 atcattaattgaatgaacctaaaaagtaaaatttgcttata 35067934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 35245646 - 35245606
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  35245646 atcattaattgaatgaacctaaaaagtaaaatttgcttata 35245606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 35245693 - 35245733
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  35245693 atcattaattgaatgaacctaaaaagtaaaatttgcttata 35245733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 36137070 - 36137030
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| ||||||| |||||    
T  36137070 atcattaattgaatgaatctaaaaagttaaatttgtttata 36137030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 43340496 - 43340540
Alignment:
Q  22 ataaatcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||| ||||||||||| || ||||||||| |||||||||||||    
T  43340496 ataaattattaattgaatgaacctaaaaagtaaaatttgcttata 43340540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 11583792 - 11583832
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  11583792 atcattaattgaatgaatctaaaaagtcaaatttgcttata 11583832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 17659550 - 17659590
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  17659550 atcattaattgaatgaatctaaaaagtaaaatttgcttata 17659590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 26206649 - 26206609
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  26206649 atcattaattgaataaatctaaaaagtaaaatttacttata 26206609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 39754154 - 39754114
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  39754154 atcattaattgaataaacctaaaaagtaaaatttgcttata 39754114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 44639831 - 44639871
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  44639831 atcattaattgaatgaatctaaaaagtgaaatttgcttata 44639871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 50038505 - 50038465
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  50038505 atcattaattgaatgaatctaaaaagtaaaatttgcttata 50038465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 50045727 - 50045687
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  50045727 atcattaattgaatgaatctaaaaagtaaaatttgcttata 50045687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 50519347 - 50519387
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  50519347 atcattaattgaatgaacctaaaaagtcaaatttgcttata 50519387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 55131624 - 55131682
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagtatt 90  Q
    ||||||||||| || ||||||||| |||||||||||   |||||| ||||||||||||||||    
T  55131624 attaattgaatgaacctaaaaagttaaatttgctta---taattaacaacggatggagtatt 55131682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 16391262 - 16391300
Alignment:
Q  28 cattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  16391262 cattaatttaataaatctaaaaagtcaaatttacttata 16391300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 16391761 - 16391799
Alignment:
Q  28 cattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||| |||||||||||||||| ||||||    
T  16391761 cattaattgaataaacctaaaaagtcaaatttacttata 16391799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 53019221 - 53019281
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagtat 89  Q
    |||||||||||||| ||  |||||||| |||||||||||   |||||||||||||| |||||||    
T  53019221 atcattaattgaatgaacttaaaaagttaaatttgctta---taattagcaacggagggagtat 53019281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 12721700 - 12721660
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  12721700 atcattaattgaatgaacctaaaaagtaaaatttgcttata 12721660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 12721731 - 12721771
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  12721731 atcattaattgaatgaacctaaaaagtaaaatttgcttata 12721771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 13743913 - 13743873
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||| ||| |||||||||||| |||||||||||||    
T  13743913 atcattaattaaatgaatctaaaaagtaaaatttgcttata 13743873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 13743943 - 13743983
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  13743943 atcattaattgaatgaacctaaaaagtaaaatttgcttata 13743983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 15133919 - 15133959
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||| |||||||| |||||||||||||    
T  15133919 atcattaattgaatgaatttaaaaagtaaaatttgcttata 15133959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 15185910 - 15185950
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  15185910 atcattaattgaatgaacctaaaaagtaaaatttgcttata 15185950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 16450214 - 16450174
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||| |||||| |||||||||||||||||| ||||    
T  16450214 atcattaattaaataaacctaaaaagtcaaatttgcatata 16450174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 17659520 - 17659480
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  17659520 atcattaattgaatgaacctaaaaagtaaaatttgcttata 17659480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 19754270 - 19754230
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||| ||||||    
T  19754270 atcattaattgaatgaatctaaaaagtaaaatttacttata 19754230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 19785536 - 19785576
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||| ||||||    
T  19785536 atcattaattgaatgaatctaaaaagtaaaatttacttata 19785576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 23511917 - 23511877
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  23511917 atcattaattgaatgaacctaaaaagtcaattttgcttata 23511877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 23511961 - 23512001
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  23511961 atcattaattgaatgaacctaaaaagtcaattttgcttata 23512001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 23754277 - 23754317
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  23754277 atcattaattgaatgaacctaaaaagtaaaatttgcttata 23754317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 25856095 - 25856135
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  25856095 atcattaattgaatgaacctaaaaagtaaaatttgcttata 25856135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 30051398 - 30051358
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  30051398 atcattaattgaatgaacctaaaaagttaaatttgcttata 30051358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 30051428 - 30051468
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||  |||||||||||| |||||||||||||    
T  30051428 atcattaattgaacgaatctaaaaagtaaaatttgcttata 30051468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 30162696 - 30162736
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  30162696 atcattaattgaatgaacctaaaaagtcaaatttacttata 30162736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 30279225 - 30279265
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  30279225 atcattaattgaatgaacctaaaaagtaaaatttgcttata 30279265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 34166167 - 34166127
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  34166167 atcattaattgaatgaacctaaaaagtcaattttgcttata 34166127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 34459070 - 34459110
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||| |||||||||||||||    
T  34459070 atcattaattgaatgaacctaaaaattcaaatttgcttata 34459110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 43635891 - 43635851
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||| ||||||    
T  43635891 atcattaattgaatgaatctaaaaagtaaaattttcttata 43635851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 43635921 - 43635961
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  43635921 atcattaattgaatcaacctaaaaagtaaaatttgcttata 43635961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 44551283 - 44551323
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||  ||||||||||| ||||||||||    
T  44551283 atcattaattgaataaacttaaaaagtcaattttgcttata 44551323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 44639801 - 44639761
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  44639801 atcattaattgaatgaacctaaaaagtaaaatttgcttata 44639761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 45890977 - 45890937
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||| ||||||| |||||||| |||||||||||||    
T  45890977 atcattaattcaataaatataaaaagtaaaatttgcttata 45890937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 48042676 - 48042716
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  48042676 atcattaattgaatgaacctaaaaagtgaaatttgcttata 48042716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 48079571 - 48079531
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  48079571 atcattaattgaatgaacctaaaaagtaaaatttgcttata 48079531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 49573934 - 49573894
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||| ||||| |||||||||||||    
T  49573934 atcattaattgaatgaatctataaagtaaaatttgcttata 49573894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 50533180 - 50533140
Alignment:
Q  27 tcattaattgaataaatctaaaaagtcaaatttgcttatac 67  Q
    ||||||||||||| || ||||||||| ||||||||||||||    
T  50533180 tcattaattgaatgaacctaaaaagtaaaatttgcttatac 50533140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 51126160 - 51126120
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  51126160 atcattaattgaatgaacctaaaaagtaaaatttgcttata 51126120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 51126190 - 51126230
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  51126190 atcattaattgaatgaacctaaaaagtaaaatttgcttata 51126230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 53019191 - 53019151
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||| | |||||||||||| |||||||||||||    
T  53019191 atcattaattgagtgaatctaaaaagttaaatttgcttata 53019151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 53176696 - 53176736
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||| |||||||| |||||||||||||    
T  53176696 atcattaattgaatgaatttaaaaagtaaaatttgcttata 53176736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 55131591 - 55131551
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||||||||||| |||||    
T  55131591 atcattaattgaatgaacctaaaaagtcaaatttgtttata 55131551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 56420516 - 56420556
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  56420516 atcattaattgaatgaacctaaaaagtaaaatttgcttata 56420556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 32589370 - 32589330
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  32589370 atcattaattgaatgaatctaaaaagtcaaatttgcttata 32589330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 49562088 - 49562050
Alignment:
Q  28 cattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  49562088 cattaattgaataaatctaaaaagtaaaatttgcttata 49562050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 32814708 - 32814753
Alignment:
Q  21 aataaatcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||| |||||||||||||| || |||||||||||||||||||||||    
T  32814708 aatacatcattaattgaatgaacctaaaaagtcaaatttgcttata 32814753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 34935623 - 34935660
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgctt 63  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  34935623 atcattaattgaataaatctaaaaagtaaaatttgctt 34935660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 54690526 - 54690563
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||||||||||||||    
T  54690526 attaattgaataaacctaaaaagtcaaatttgcttata 54690563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 7672774 - 7672818
Alignment:
Q  22 ataaatcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||| |||||||||||| |||||| ||||||    
T  7672774 ataaatcattaattgaatgaatctaaaaagtaaaattttcttata 7672818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 16894255 - 16894295
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  16894255 atcattaattgaataaatctaaaaagtcaattttgtttata 16894295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 20821501 - 20821457
Alignment:
Q  21 aataaatcattaattgaataaatctaaaaagtcaaatttgcttat 65  Q
    |||| |||||||||||||| || ||||||||||||||||||||||    
T  20821501 aatacatcattaattgaatgaacctaaaaagtcaaatttgcttat 20821457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 24599964 - 24600004
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  24599964 atcattaattgaataaacctaaaaagtaaaatttgcttata 24600004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 29076610 - 29076650
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  29076610 atcattaattgaatgaatctaaaaagtcaattttgcttata 29076650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 42595822 - 42595862
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  42595822 atcattaattgaatgaatctaaaaagtaaaatttgcttata 42595862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 43898148 - 43898108
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  43898148 atcattaattgaatgaatctaaaaagtaaaatttgcttata 43898108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 12569190 - 12569227
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  12569190 attaattgaatgaatctaaaaagtaaaatttgcttata 12569227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 13545654 - 13545691
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  13545654 attaattgaatgaatctaaaaagtaaaatttgcttata 13545691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 23317076 - 23317031
Alignment:
Q  21 aataaatcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||| |||||||||||||| | | ||||||||||||||||||||||    
T  23317076 aatacatcattaattgaatgactataaaaagtcaaatttgcttata 23317031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 7672748 - 7672708
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||| ||||||    
T  7672748 atcattaattgaatgaatctaaaaagtaaaattttcttata 7672708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 14626713 - 14626753
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||| ||||||||||| ||||||||||    
T  14626713 atcattaattgaatgaatttaaaaagtcaattttgcttata 14626753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 17005045 - 17005085
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  17005045 atcattaattgaatgaacctaaaaagtcaattttgcttata 17005085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 17501490 - 17501530
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||| |||||||||| ||||||||||    
T  17501490 atcattaattgaatgaatcaaaaaagtcaattttgcttata 17501530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 18480961 - 18481001
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||| ||||| ||||||||| |||||||||||||    
T  18480961 atcattaattggataaacctaaaaagtaaaatttgcttata 18481001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 25995627 - 25995667
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| || |||||||||||||||||||||||    
T  25995627 atcattaaatgaatgaacctaaaaagtcaaatttgcttata 25995667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 26770806 - 26770846
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  26770806 atcattaattgaatgaacctaaaaagtaaaatttgcttata 26770846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 32146519 - 32146479
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||| |||||||| |||||| ||||||    
T  32146519 atcattaattgaataaatttaaaaagtaaaatttacttata 32146479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 34205618 - 34205578
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  34205618 atcattaattgaatgaacctaaaaagtaaaatttgcttata 34205578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 34935593 - 34935553
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  34935593 atcattaattgaatgaacctaaaaagtaaaatttgcttata 34935553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 40326523 - 40326563
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  40326523 atcattaattgaatgaacctaaaaagtcaattttgcttata 40326563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 44435259 - 44435299
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  44435259 atcattaattgaatgaacctaaaaagtgaaatttgcttata 44435299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 44544213 - 44544173
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  44544213 atcattaattgaatgaacctaaaaagtcaattttgcttata 44544173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 46151073 - 46151037
Alignment:
Q  30 ttaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||| |||||||||||| |||||||||||||    
T  46151073 ttaattgaatgaatctaaaaagtaaaatttgcttata 46151037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 47931774 - 47931814
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||| ||||||| | |||||||||||||    
T  47931774 atcattaattgaataaacctaaaaaattaaatttgcttata 47931814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 50623121 - 50623161
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||| | |||||||||||||    
T  50623121 atcattaattgaatgaatctaaaaaataaaatttgcttata 50623161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 51486481 - 51486441
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  51486481 atcattaattgaatgaacctaaaaagtcaattttgcttata 51486441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 51760224 - 51760184
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||||||| |||||||||    
T  51760224 atcattaattgaatgaacctaaaaagtcaaacttgcttata 51760184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 53717982 - 53718022
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  53717982 atcattaattgaatgaacctaaaaagtaaaatttgcttata 53718022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 54690493 - 54690453
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||  ||||||||||||||||||||||    
T  54690493 atcattaattgaatgaacataaaaagtcaaatttgcttata 54690453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 21909926 - 21909966
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  21909926 atcattaattgaataaatctaaaaagtaaaatttgcttata 21909966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 48376893 - 48376930
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  48376893 attaattgaatgaatctaaaaagtcaaatttgcttata 48376930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 3160805 - 3160765
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  3160805 atcattaattgaatgaacctaaaaagtcaaatttgcttata 3160765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 3606316 - 3606276
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  3606316 atcattaattgaatgaatctaaaaagtcaattttgcttata 3606276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 4682992 - 4682952
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  4682992 atcattaattgaataaatctaaaaagttaattttgcttata 4682952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 12447509 - 12447469
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  12447509 atcattaattgaatacacctaaaaagtcaaatttgcttata 12447469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 12993636 - 12993676
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  12993636 atcattaattgaatgaacctaaaaagtcaaatttgcttata 12993676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 34598947 - 34598987
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  34598947 atcattaattgaatgaatctaaaaagtcaaatttacttata 34598987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 37255181 - 37255141
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  37255181 atcattaattgaatgaatctaaaaagtaaaatttgcttata 37255141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 39181104 - 39181064
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  39181104 atcattaattgaatgaatctaaaaagtaaaatttgcttata 39181064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 42140415 - 42140455
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  42140415 atcattaattgaataaacctaaaaagtcaattttgcttata 42140455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 48605155 - 48605195
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  48605155 atcattaattgaatgaacctaaaaagtcaaatttgcttata 48605195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 50998364 - 50998298
Alignment:
Q  21 aataaatcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagtatt 90  Q
    |||| |||||||||||||| || ||||||| |||||||||||||   ||||| ||||||||| |||||||    
T  50998364 aatacatcattaattgaatgaacctaaaaaatcaaatttgctta---taattggcaacggatagagtatt 50998298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 3160837 - 3160875
Alignment:
Q  28 cattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||| || |||||||||||||||||||||||    
T  3160837 cattaattgaatgaacctaaaaagtcaaatttgcttata 3160875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 31634479 - 31634517
Alignment:
Q  28 cattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||| || |||||||||||||||||||||||    
T  31634479 cattaattgaattaacctaaaaagtcaaatttgcttata 31634517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 15013709 - 15013672
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  15013709 attaattgaatgaatctaaaaagtcaaatttacttata 15013672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 33324133 - 33324170
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  33324133 attaattgaataaacctaaaaagtaaaatttgcttata 33324170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 39015618 - 39015558
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagtat 89  Q
    |||||||||||||| || ||||||||||||||||| |||   ||||| |||||||| |||||||    
T  39015618 atcattaattgaatgaacctaaaaagtcaaatttgttta---taattggcaacggagggagtat 39015558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 435261 - 435221
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| ||||||||||||||| ||||||||||    
T  435261 atcattaaatgaatgaatctaaaaagtcaattttgcttata 435221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 2091801 - 2091761
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  2091801 atcattaattgaatgaacctaaaaagtcaaatttacttata 2091761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 4974130 - 4974170
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| ||||||||||||||| ||||||||||    
T  4974130 atcattaaatgaatgaatctaaaaagtcaattttgcttata 4974170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 5852743 - 5852703
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  5852743 atcattaattgaatgaacctaaaaagtaaaatttgcttata 5852703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 6763419 - 6763459
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  6763419 atcattaattgaatgaacctaaaaagtaaaatttgcttata 6763459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 7230064 - 7230024
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| || ||||||||||    
T  7230064 atcattaattgaatgaatctaaaaagttaattttgcttata 7230024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 11343748 - 11343788
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || | |||||||||||||||||||||    
T  11343748 atcattaattgaatgaaccaaaaaagtcaaatttgcttata 11343788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 11501768 - 11501808
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || | |||||||||||||||||||||    
T  11501768 atcattaattgaatgaaccaaaaaagtcaaatttgcttata 11501808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 16426963 - 16426923
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| ||||||||||||||| ||||||||||    
T  16426963 atcattaaatgaatgaatctaaaaagtcaattttgcttata 16426923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 17988277 - 17988237
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  17988277 atcattaattgaatgaacctaaaaagtaaaatttgcttata 17988237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 21852492 - 21852452
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  21852492 atcattaattgaatgaacctaaaaagtcaattttgcttata 21852452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 21909896 - 21909856
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||| ||||||||| |||||| ||||||    
T  21909896 atcattaattgaataaacctaaaaagtaaaatttacttata 21909856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 25378312 - 25378272
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  25378312 atcattaattgaatgaacctaaaaagtaaaatttgcttata 25378272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 26059200 - 26059244
Alignment:
Q  22 ataaatcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||| ||  |||||||| |||||||||||||    
T  26059200 ataaatcattaattgaatgaacttaaaaagtaaaatttgcttata 26059244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 26660699 - 26660659
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  26660699 atcattaattgaatgaacctaaaaagtaaaatttgcttata 26660659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 27549130 - 27549170
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  27549130 atcattaattgaatgaacctaaaaagtaaaatttgcttata 27549170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 31909804 - 31909764
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  31909804 atcattaattgaatgaacctaaaaagtaaaatttgcttata 31909764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 34062028 - 34062068
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  34062028 atcattaattgaatgaacctaaaaagtgaaatttgcttata 34062068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 37215227 - 37215187
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| ||||||||||||||| ||||||||||    
T  37215227 atcattaaatgaatgaatctaaaaagtcaattttgcttata 37215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 39181136 - 39181176
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  39181136 atcattaattgaatgaacctaaaaagtaaaatttgcttata 39181176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 40328957 - 40328997
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| ||||||| |||||    
T  40328957 atcattaattgaatgaatctaaaaagtaaaatttgtttata 40328997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 46518030 - 46518070
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  46518030 atcattaattgaatgaacctaaaaagtaaaatttgcttata 46518070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 47011329 - 47011369
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  47011329 atcattaattgaatgaacctaaaaagtaaaatttgcttata 47011369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 47599962 - 47599922
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||| ||||||||  ||||||||||||    
T  47599962 atcattaattgaataaatttaaaaagtagaatttgcttata 47599922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 47991832 - 47991792
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| || |||||||||||||||||||||||    
T  47991832 atcattaaatgaatgaacctaaaaagtcaaatttgcttata 47991792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 48605125 - 48605085
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  48605125 atcattaattgaatgaacctaaaaagtaaaatttgcttata 48605085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 52253593 - 52253553
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||| |||||||| |||||||||||||    
T  52253593 atcattaattgaatgaatataaaaagtaaaatttgcttata 52253553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 52880000 - 52880040
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  52880000 atcattaattgaatgaacctaaaaagtcaaatttacttata 52880040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 8029438 - 8029475
Alignment:
Q  22 ataaatcattaattgaataaatctaaaaagtcaaattt 59  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8029438 ataaatcattaattgaatgaatctaaaaagtcaaattt 8029475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 13397471 - 13397431
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  13397471 atcattaattgaataaatctaaaaaatcaaatttgtttata 13397431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 1858362 - 1858402
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||  |||||||| |||||||||||||    
T  1858362 atcattaattgaataaacttaaaaagtaaaatttgcttata 1858402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 3750286 - 3750326
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| ||||||||||||||| ||||||||||    
T  3750286 atcattaaatgaatgaatctaaaaagtcaattttgcttata 3750326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 5433416 - 5433456
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||  ||||||||||||||||||||||    
T  5433416 atcattaattgaatgaacataaaaagtcaaatttgcttata 5433456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 7418930 - 7418890
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  7418930 atcattaattgaatgaacctaaaaagtaaaatttgcttata 7418890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 9908221 - 9908261
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||| ||||||    
T  9908221 atcattaattgaatgaacctaaaaagtcaaatttacttata 9908261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 10644319 - 10644279
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||| |||||| |||||||||||| ||||||||||    
T  10644319 atcattaattaaataaacctaaaaagtcaattttgcttata 10644279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 10731558 - 10731598
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  10731558 atcattaattgaatgaacctaaaaagtaaaatttgcttata 10731598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 11989201 - 11989161
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  11989201 atcattaattgaatgaacctaaaaagtaaaatttgcttata 11989161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 11989227 - 11989267
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  11989227 atcattaattgaatgaacctaaaaagtaaaatttgcttata 11989267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 19687522 - 19687482
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  19687522 atcattaattgaatgaacctaaaaagtaaaatttgcttata 19687482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 21478608 - 21478568
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||||||||||||||| |||| |||||    
T  21478608 atcattaattgaatgaatctaaaaagtcaattttgtttata 21478568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 29938405 - 29938365
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| ||||||||||||||| ||||||||||    
T  29938405 atcattaaatgaatgaatctaaaaagtcaattttgcttata 29938365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 32786171 - 32786131
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  32786171 atcattaattgaatgaacctaaaaagtaaaatttgcttata 32786131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 32786201 - 32786241
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  32786201 atcattaattgaatgaacctaaaaagtaaaatttgcttata 32786241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 33169267 - 33169307
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||||||  |||||||| |||||||||||||    
T  33169267 atcattaattgaataaacttaaaaagtaaaatttgcttata 33169307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 58385 - 58425
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  58385 atcattaattgaatgaacctaaaaagtcaaatttgcttata 58425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 3498349 - 3498309
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  3498349 atcattaattgaatgaatctaaaaagtaaaatttgcttata 3498309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 11032358 - 11032318
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  11032358 atcattaattgaatgaatataaaaagtcaaatttgcttata 11032318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 25099591 - 25099551
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||||||||||||||||||| ||||||||||    
T  25099591 atcattaaatgaataaatctaaaaagtcaattttgcttata 25099551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 27234943 - 27235002
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagta 88  Q
    |||||||||||||| || |||||||||||||||| ||||   |||||||||||||| ||||||    
T  27234943 atcattaattgaatgaacctaaaaagtcaaatttactta---taattagcaacggagggagta 27235002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 45833275 - 45833315
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  45833275 atcattaattgaatgaatctaaaaagtaaaatttgcttata 45833315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 46658817 - 46658857
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| |||||||||||||    
T  46658817 atcattaattgaatgaatctaaaaagtaaaatttgcttata 46658857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 9140233 - 9140276
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttatacta 69  Q
    |||||||| ||||| ||||||||||||||| |||||||||||||    
T  9140233 atcattaaatgaatgaatctaaaaagtcaattttgcttatacta 9140276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 27942380 - 27942341
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttat 65  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  27942380 atcattaattgaatgaatctaaaaagtaaaatttgcttat 27942341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 46578320 - 46578282
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgctta 64  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  46578320 atcattaattgaatgaatttaaaaagtcaaatttgctta 46578282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 27042185 - 27042218
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaattt 59  Q
    |||||||||||||| |||||||||||||||||||    
T  27042185 atcattaattgaatgaatctaaaaagtcaaattt 27042218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 31365653 - 31365690
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgctt 63  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  31365653 atcattaattgaataaatctagaaagtaaaatttgctt 31365690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 35160804 - 35160744
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagtat 89  Q
    |||||||||||||| || |||||||||||| ||||||||   || |||| ||||||||||||||    
T  35160804 atcattaattgaatgaacctaaaaagtcaattttgctta---tatttagaaacggatggagtat 35160744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 3341945 - 3341905
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| ||| ||||||||||| ||||||||||    
T  3341945 atcattaattgaatgaatataaaaagtcaattttgcttata 3341905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 7344962 - 7344922
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  7344962 atcattaattgaatcaacctaaaaagttaaatttgcttata 7344922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 7344983 - 7345023
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  7344983 atcattaattgaatgaaactaaaaagtaaaatttgcttata 7345023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 8379192 - 8379152
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  8379192 atcattaattgaatgaacctaaaaagttaaatttgcttata 8379152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 9503981 - 9504021
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||| ||| |||||||||||| |||||||||||||    
T  9503981 atcattaattaaatgaatctaaaaagttaaatttgcttata 9504021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 14206415 - 14206455
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||  || |||||||||||||||||||||||    
T  14206415 atcattaattgaacgaacctaaaaagtcaaatttgcttata 14206455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 14215105 - 14215145
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||  || |||||||||||||||||||||||    
T  14215105 atcattaattgaacgaacctaaaaagtcaaatttgcttata 14215145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 18941389 - 18941349
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  18941389 atcattaattgaatgaacctaaaaagtaaaatttgcttata 18941349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 18941396 - 18941436
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  18941396 atcattaattgaatgaacctaaaaagtaaaatttgcttata 18941436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 19532008 - 19531968
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  19532008 atcattaattgaatgaacctaaaaagtaaaatttgcttata 19531968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 19532038 - 19532078
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  19532038 atcattaattgaatgaacctaaaaagtaaaatttgcttata 19532078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 20353112 - 20353072
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  20353112 atcattaattgaatgaacctaaaaagtaaaatttgcttata 20353072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 20353162 - 20353202
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||||| ||||||| |||||    
T  20353162 atcattaattgaatgaatctaaaaagtaaaatttgattata 20353202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 27234913 - 27234873
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  27234913 atcattaattgaatgaacctaaaaagtaaaatttgcttata 27234873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 28003263 - 28003303
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  28003263 atcattaattgaatgaacctaaaaagtaaaatttgcttata 28003303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 30005961 - 30006001
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  30005961 atcattaattgaatgaacctaaaaagtcaattttgcttata 30006001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 31669850 - 31669810
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| || |||||||||||||||||||||||    
T  31669850 atcattaaatgaatgaacctaaaaagtcaaatttgcttata 31669810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 33471545 - 33471505
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| |||||||||| | |||||||||||||    
T  33471545 atcattaattgaatgaatctaaaaaataaaatttgcttata 33471505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 35593696 - 35593656
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||||||||||||||||| | |||||| ||||||    
T  35593696 atcattaattgaataaatctaaaaaataaaatttacttata 35593656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 37066237 - 37066197
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  37066237 atcattaattgaatgaacctaaaaagtaaaatttgcttata 37066197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 37066267 - 37066307
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  37066267 atcattaattgaatgaacctaaaaagtaaaatttgcttata 37066307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 39976099 - 39976059
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| ||||||||||||||| ||||||||||    
T  39976099 atcattaaatgaatgaatctaaaaagtcaattttgcttata 39976059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 40116195 - 40116155
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || |||||||||| ||||||||||||    
T  40116195 atcattaattgaatgaacctaaaaagtcgaatttgcttata 40116155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 43232950 - 43232990
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  43232950 atcattaattgaatgaacctaaaaagtaaaatttgcttata 43232990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 46477188 - 46477148
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  46477188 atcattaattgaatgaacctaaaaagtaaaatttgcttata 46477148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 46578350 - 46578390
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  46578350 atcattaattgaatgaacctaaaaagtaaaatttgcttata 46578390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 46658787 - 46658747
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  46658787 atcattaattgaatgaacctaaaaagtaaaatttgcttata 46658747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 48135521 - 48135481
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||| ||||| |||||||||||| |||||||||||||    
T  48135521 atcattaaatgaatgaatctaaaaagtaaaatttgcttata 48135481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 14088 - 14049
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttat 65  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  14088 atcattaattgaatgaatctaaaaagtaaaatttgcttat 14049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 14118 - 14158
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  14118 atcattaattgaatgaacctaaaaagtaaaatttgcttata 14158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 13750 - 13691
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttatactaattagcaacggatggagtat 89  Q
    |||||||||||||| ||||||||||||||| ||| |||||    ||||| ||||||||||||||    
T  13750 atcattaattgaatgaatctaaaaagtcaattttacttat----attagaaacggatggagtat 13691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 26665 - 26702
Alignment:
Q  29 attaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    ||||||||||| || |||||||||||||||||||||||    
T  26665 attaattgaatgaacctaaaaagtcaaatttgcttata 26702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 38092 - 38132
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  38092 atcattaattgaatgaacctaaaaagtaaaatttgcttata 38132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 264 - 304
Alignment:
Q  26 atcattaattgaataaatctaaaaagtcaaatttgcttata 66  Q
    |||||||||||||| || ||||||||| |||||||||||||    
T  264 atcattaattgaatgaacctaaaaagtaaaatttgcttata 304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University