View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7769_high_2 (Length: 540)

Name: NF7769_high_2
Description: NF7769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7769_high_2
NF7769_high_2
[»] chr5 (26 HSPs)
chr5 (272-517)||(41342514-41342762)
chr5 (18-171)||(41342271-41342426)
chr5 (144-204)||(8457036-8457096)
chr5 (144-250)||(10081093-10081200)
chr5 (151-205)||(36769153-36769207)
chr5 (144-201)||(614465-614522)
chr5 (144-196)||(9738056-9738108)
chr5 (144-204)||(11856290-11856350)
chr5 (144-204)||(25560400-25560460)
chr5 (144-204)||(42119617-42119677)
chr5 (144-204)||(29491485-29491545)
chr5 (145-205)||(27916133-27916194)
chr5 (161-204)||(22903252-22903295)
chr5 (227-268)||(41342447-41342488)
chr5 (169-204)||(2676533-2676568)
chr5 (157-204)||(10052618-10052665)
chr5 (151-201)||(6174743-6174793)
chr5 (151-205)||(23218481-23218534)
chr5 (151-204)||(16618649-16618701)
chr5 (151-205)||(6257489-6257542)
chr5 (151-201)||(29790297-29790347)
chr5 (151-205)||(33271349-33271403)
chr5 (151-205)||(37169112-37169165)
chr5 (151-204)||(3341199-3341252)
chr5 (151-204)||(38397595-38397647)
chr5 (144-205)||(39862560-39862619)
[»] chr4 (25 HSPs)
chr4 (144-247)||(17888623-17888727)
chr4 (144-204)||(35322777-35322837)
chr4 (144-245)||(46473948-46474049)
chr4 (144-251)||(31377337-31377445)
chr4 (144-204)||(322622-322682)
chr4 (143-196)||(20818570-20818623)
chr4 (144-199)||(9742606-9742661)
chr4 (144-205)||(12792304-12792365)
chr4 (158-204)||(11054448-11054494)
chr4 (144-204)||(10094466-10094531)
chr4 (144-205)||(50328790-50328851)
chr4 (144-187)||(24991965-24992008)
chr4 (151-205)||(1535767-1535820)
chr4 (151-205)||(25954746-25954799)
chr4 (151-205)||(35018932-35018985)
chr4 (151-205)||(37801343-37801396)
chr4 (151-204)||(16338323-16338375)
chr4 (161-204)||(33981997-33982040)
chr4 (166-205)||(47084014-47084053)
chr4 (151-201)||(34240993-34241042)
chr4 (151-205)||(49284353-49284406)
chr4 (159-205)||(52632514-52632559)
chr4 (143-204)||(54090176-54090236)
chr4 (144-204)||(19124811-19124871)
chr4 (84-140)||(44362906-44362962)
[»] chr3 (26 HSPs)
chr3 (144-204)||(1781757-1781817)
chr3 (144-205)||(10839453-10839514)
chr3 (143-205)||(48206848-48206910)
chr3 (146-203)||(8926762-8926819)
chr3 (144-204)||(20382514-20382574)
chr3 (144-204)||(36539627-36539687)
chr3 (144-204)||(19649445-19649506)
chr3 (144-204)||(36826027-36826087)
chr3 (144-204)||(43347409-43347468)
chr3 (151-200)||(54546904-54546953)
chr3 (143-200)||(19644400-19644458)
chr3 (151-205)||(33103738-33103792)
chr3 (150-204)||(47315183-47315237)
chr3 (158-204)||(3178699-3178745)
chr3 (151-205)||(5391453-5391506)
chr3 (151-205)||(6280438-6280492)
chr3 (151-205)||(23467573-23467626)
chr3 (151-205)||(40845996-40846049)
chr3 (151-205)||(44995048-44995101)
chr3 (151-204)||(13856096-13856148)
chr3 (151-204)||(21853194-21853246)
chr3 (161-205)||(50663136-50663180)
chr3 (144-204)||(791812-791869)
chr3 (151-205)||(32352843-32352896)
chr3 (151-201)||(51336208-51336258)
chr3 (151-192)||(46685862-46685903)
[»] chr1 (27 HSPs)
chr1 (143-205)||(26835332-26835394)
chr1 (143-201)||(38859849-38859907)
chr1 (144-201)||(30252818-30252875)
chr1 (144-204)||(10907721-10907781)
chr1 (147-205)||(44107464-44107522)
chr1 (144-204)||(14796871-14796931)
chr1 (144-204)||(14805745-14805805)
chr1 (144-198)||(37189304-37189358)
chr1 (153-202)||(1106773-1106822)
chr1 (151-248)||(48392485-48392581)
chr1 (151-205)||(3346782-3346835)
chr1 (151-201)||(5558308-5558358)
chr1 (151-205)||(7742858-7742911)
chr1 (151-205)||(10156095-10156148)
chr1 (144-186)||(30745357-30745399)
chr1 (144-186)||(30766808-30766850)
chr1 (151-205)||(42517377-42517430)
chr1 (150-204)||(44462560-44462614)
chr1 (151-205)||(49902464-49902517)
chr1 (151-204)||(23908282-23908334)
chr1 (165-204)||(42456566-42456606)
chr1 (166-204)||(2756256-2756294)
chr1 (151-201)||(5974988-5975037)
chr1 (144-186)||(8430514-8430556)
chr1 (151-205)||(26511712-26511766)
chr1 (151-205)||(29149627-29149680)
chr1 (151-184)||(45968683-45968716)
[»] chr7 (17 HSPs)
chr7 (144-204)||(10334173-10334233)
chr7 (150-204)||(17303194-17303248)
chr7 (144-204)||(26284451-26284510)
chr7 (144-204)||(33057730-33057789)
chr7 (143-205)||(2702292-2702354)
chr7 (150-204)||(41853128-41853182)
chr7 (150-204)||(19334640-19334693)
chr7 (151-205)||(24320518-24320571)
chr7 (159-205)||(25128163-25128209)
chr7 (151-205)||(29556018-29556071)
chr7 (151-205)||(44164822-44164875)
chr7 (151-204)||(34707113-34707165)
chr7 (166-205)||(43342415-43342454)
chr7 (151-205)||(10576669-10576722)
chr7 (151-205)||(29238222-29238275)
chr7 (151-205)||(32876609-32876662)
chr7 (144-189)||(23032198-23032243)
[»] chr6 (14 HSPs)
chr6 (144-199)||(13103191-13103246)
chr6 (144-201)||(24500773-24500830)
chr6 (144-204)||(11279536-11279595)
chr6 (150-204)||(28750729-28750783)
chr6 (144-205)||(27863694-27863754)
chr6 (144-247)||(34103638-34103740)
chr6 (149-205)||(11084606-11084661)
chr6 (151-202)||(11212669-11212720)
chr6 (151-205)||(14309877-14309930)
chr6 (151-205)||(24694730-24694783)
chr6 (151-204)||(9231933-9231985)
chr6 (149-204)||(8415353-8415407)
chr6 (143-189)||(7517026-7517072)
chr6 (220-248)||(34383475-34383503)
[»] chr2 (20 HSPs)
chr2 (149-204)||(28321781-28321836)
chr2 (144-205)||(1387361-1387421)
chr2 (144-205)||(14539777-14539838)
chr2 (143-204)||(40780050-40780111)
chr2 (152-204)||(23685451-23685503)
chr2 (147-204)||(32486239-32486296)
chr2 (150-205)||(41674786-41674841)
chr2 (150-204)||(6318538-6318592)
chr2 (144-205)||(33009666-33009728)
chr2 (151-204)||(3956567-3956620)
chr2 (150-205)||(2250473-2250528)
chr2 (143-201)||(2888039-2888097)
chr2 (151-205)||(19181544-19181597)
chr2 (151-205)||(40277367-40277420)
chr2 (151-205)||(42769837-42769890)
chr2 (150-204)||(43139741-43139795)
chr2 (152-205)||(14186518-14186570)
chr2 (151-204)||(29846439-29846491)
chr2 (150-201)||(25665222-25665273)
chr2 (151-205)||(14942123-14942176)
[»] scaffold0045 (1 HSPs)
scaffold0045 (144-201)||(34525-34582)
[»] chr8 (18 HSPs)
chr8 (149-204)||(10112042-10112097)
chr8 (151-205)||(35806790-35806843)
chr8 (144-205)||(26021391-26021451)
chr8 (160-204)||(2824270-2824314)
chr8 (157-201)||(16819061-16819105)
chr8 (151-205)||(21525354-21525407)
chr8 (151-205)||(33934448-33934501)
chr8 (150-204)||(34697468-34697522)
chr8 (151-205)||(42072424-42072477)
chr8 (144-205)||(16523064-16523125)
chr8 (144-205)||(19334778-19334838)
chr8 (151-204)||(22324593-22324645)
chr8 (168-204)||(16591440-16591476)
chr8 (156-205)||(2271196-2271246)
chr8 (151-185)||(24065288-24065322)
chr8 (151-201)||(42013872-42013921)
chr8 (144-184)||(21488082-21488121)
chr8 (152-204)||(43282932-43282984)
[»] scaffold0016 (1 HSPs)
scaffold0016 (160-205)||(85505-85550)
[»] scaffold0086 (1 HSPs)
scaffold0086 (150-205)||(20902-20957)
[»] scaffold0079 (1 HSPs)
scaffold0079 (151-204)||(54485-54537)


Alignment Details
Target: chr5 (Bit Score: 176; Significance: 1e-94; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 272 - 517
Target Start/End: Original strand, 41342514 - 41342762
Alignment:
Q  272 gcattgcatttggctcactcaacgttgagttgccacttgaactctcacttccacttcgattggaagccaatgaaggtaa----gagaaacaataagttgg 367  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||    
T  41342514 gcattgtatttggcttactcaacgttgagttgccacttgaactctcacttccacttcgattggaagccaatgaaggtaagtaagagaaacaataagttgg 41342613  T
Q  368 ctcttaagtttttacagattcaatcttaaatatataatgttgactctagccggtcaaagaattttcattagtcggtgaagcctaaaacaaattttaaaac 467  Q
    |||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41342614 ctcttaagtttttaaatattctatcttaaatatataatgttgactctagccggtcaaagaattttcattagtcggtgaagcctaaaacaaattttaaaac 41342713  T
Q  468 attagannnnnnngttggtgggctttcaagttagagttttagtaatctta 517  Q
    || |||       |||||||||| |||||||||||||||||||| |||||    
T  41342714 atgagatttttttgttggtgggc-ttcaagttagagttttagtagtctta 41342762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 41342271 - 41342426
Alignment:
Q  18 atttcatttttaacaaattaatatacttttgtcacaagtgtaattttgtcatatacatgtaatatttaggcttaattacagttttggtcccctaattttc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  41342271 atttcatttttaacaaattaatatacttttgtcacaagtgtaattttgtcatatacatgtaatatctaggcttaattgcagttttggtcccgtaattttc 41342370  T
Q  118 aattttatgtagaattggtc-ccctattttaga-ttttttgattatttgcttgcaa 171  Q
    | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  41342371 acttttatgtagaattggtctccctattttagatttttttgattatttgcttgcaa 41342426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 8457036 - 8457096
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8457036 tttagatttttttattatttgcttgcaatttcttatgtaaacccctataaatatgttgcaa 8457096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 10081200 - 10081093
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa-annnnnnnacccaggctttacaataatcctagctccgc 242  Q
    |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||          ||| ||||||||||||||||| |||||||    
T  10081200 tttagatttttttattatttgcttacaatttcttatgtaaactcctataaatgtgttgcaatttttttttgcccgggctttacaataatcctggctccgc 10081101  T
Q  243 cactgctt 250  Q
    ||||||||    
T  10081100 cactgctt 10081093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 36769153 - 36769207
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36769153 tttttgattatttgcttgcaatttcatatgtaaacccctataaatgtgttgcaaa 36769207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 614465 - 614522
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  614465 tttagatttttttattatttgcttgcaatttcttatgtaaacacctataaatgtgttg 614522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 9738056 - 9738108
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatg 196  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9738056 tttagattttttgtttatttgcttgcaatttcttatgtaaacccctataaatg 9738108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 11856350 - 11856290
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||    
T  11856350 tttagattttttgattatttacttgcaatttcttatgtaaactcctataaatatgttgcaa 11856290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 25560400 - 25560460
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25560400 tttagattattttattatttgcttgcaatttcttatgtaaacccatataaatgtgttgcaa 25560460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 42119677 - 42119617
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  42119677 tttagatttttttattatttgtttgtaatttcttatgtaaacccctataaatgtgttgcaa 42119617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 29491485 - 29491545
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||| |||||||||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  29491485 tttaaattttttgattatttgcttgcaatttcttatgcaaacacatataaatgtgttgcaa 29491545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 27916194 - 27916133
Alignment:
Q  145 ttagattttttgattatttgcttgcaatttcttatgtaaacc-cctataaatgtgttgcaaa 205  Q
    ||||||||||| |||||||| |||||||||||||| |||||| |||||||||||||||||||    
T  27916194 ttagatttttttattatttgtttgcaatttcttatataaacctcctataaatgtgttgcaaa 27916133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 22903295 - 22903252
Alignment:
Q  161 tttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  22903295 tttgcttgcaatttcttatgtaaacctctataaatgtgttgcaa 22903252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 41342447 - 41342488
Alignment:
Q  227 ataatcctagctccgccactgctttgaatataaatgtcattt 268  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  41342447 ataatcctggctccgccactgctttgaatataaatgtcattt 41342488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 2676533 - 2676568
Alignment:
Q  169 caatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||||||||||||||||||||||||||||    
T  2676533 caatttcttatgtaaacccctataaatgtgttgcaa 2676568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 10052618 - 10052665
Alignment:
Q  157 attatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  10052618 attatttgcttgcaatttcttatgtaaaagcctataaatatgttgcaa 10052665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 6174793 - 6174743
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||| |||||    
T  6174793 ttttttattatttgcttgcaatttcctatgtaaacccccataaatatgttg 6174743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 23218534 - 23218481
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  23218534 ttttttattatttgcttgcaatttcttatgt-actccctataaatgtgttgcaaa 23218481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 16618649 - 16618701
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  16618649 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 16618701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 6257489 - 6257542
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||    
T  6257489 ttttttattatttgcttgcaatttcttatat-acgccctataaatgtgttgcaaa 6257542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 29790297 - 29790347
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    |||||||||||||||||  ||||||||||||||  ||||||||| ||||||    
T  29790297 tttttgattatttgcttttaatttcttatgtaattccctataaacgtgttg 29790347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 33271349 - 33271403
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| |||||||| ||| |||||||||| ||||||||||||||| | |||||||    
T  33271349 ttttttattatttgtttgtaatttcttatataaacccctataaatatattgcaaa 33271403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 37169112 - 37169165
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||| |||||    
T  37169112 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgtggcaaa 37169165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 3341199 - 3341252
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||||||||| |||||| ||||||||||| |  | ||||||||||||    
T  3341199 tttttgattatttgctttcaattttttatgtaaacctccttgaatgtgttgcaa 3341252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 38397647 - 38397595
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||||||||||||||||||||| |   ||||||||||||||||||    
T  38397647 ttttttattatttgcttgcaatttcttatgt-acgtcctataaatgtgttgcaa 38397595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 39862560 - 39862619
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||||||||||| ||||||||||||||||||||||| | |  ||||| ||||||||||||||    
T  39862560 tttagatttttt-attatttgcttgcaatttcttatat-acgccctaaaaatgtgttgcaaa 39862619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 17888623 - 17888727
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa-annnnnnnacccaggctttacaataatcctagctccgc 242  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |        ||| ||||||||||||||||| |||||||    
T  17888623 tttagatttttttattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaatatatttttgccccggctttacaataatcctggctccgc 17888722  T
Q  243 cactg 247  Q
    |||||    
T  17888723 cactg 17888727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 35322777 - 35322837
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  35322777 tttagattttttgattatttgcttgcaatttcttatataaacccctataaaagtgttgcaa 35322837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 46474049 - 46473948
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaannnnnnnacccaggctttacaataatcctagctccgcc 243  Q
    |||||||||||  |||||||||||| ||||||||||||||| || |||||||||||||||||       |||||| ||||||||||||||| ||||||||    
T  46474049 tttagatttttgtattatttgcttgtaatttcttatgtaaatccttataaatgtgttgcaaaattttttacccagactttacaataatcctggctccgcc 46473950  T
Q  244 ac 245  Q
    ||    
T  46473949 ac 46473948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 31377445 - 31377337
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa-annnnnnnacccaggctttacaataatcctagctccgc 242  Q
    |||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||          ||| ||||||||||||||||| |||||||    
T  31377445 tttagattttttaactatttgcttgcaatttcttatgtaaaccgctataaatgtgttgcaatttttttttgcccgggctttacaataatcctggctccgc 31377346  T
Q  243 cactgcttt 251  Q
    |||||||||    
T  31377345 cactgcttt 31377337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 322622 - 322682
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  322622 tttaaattttttgattatttgcttgcaatttcttatgtaaacacctgtaaatgtgttgcaa 322682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 20818623 - 20818570
Alignment:
Q  143 ttttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatg 196  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  20818623 ttttagattttttgattatttgtttgcaatttcttatgtaaacctctataaatg 20818570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 9742606 - 9742661
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgt 199  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  9742606 tttagattttttgattattttcatgcaatttcttatgtaaacacctataaatgtgt 9742661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 12792304 - 12792365
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||||||| ||||||||||||| |||||||||| |||||  ||||||||||||||||||    
T  12792304 tttagatttttagattatttgcttgaaatttcttatataaacatctataaatgtgttgcaaa 12792365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 11054494 - 11054448
Alignment:
Q  158 ttatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||    
T  11054494 ttatttgcttgcaatttcttatgtaaacctttataaatgtgttgcaa 11054448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 10094466 - 10094531
Alignment:
Q  144 tttagattttttgattatttgcttgca-----atttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||||||||||     ||||||||||||||| ||||||||||| ||||||    
T  10094466 tttagattttttgattatttgcttgcaattatatttcttatgtaaacacctataaatgtattgcaa 10094531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 50328851 - 50328790
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||| ||||||| ||||||  |||||||||| |||||||||||| |||||||||||||||||    
T  50328851 tttaaatttttttattattcacttgcaattttttatgtaaacccttataaatgtgttgcaaa 50328790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 24992008 - 24991965
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaaccc 187  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  24992008 tttagattttatgattatttgctggcaatttcttatgtaaaccc 24991965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 1535820 - 1535767
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  1535820 ttttttattatttgcttgcaatttcttatgt-atgccctataaatgtgttgcaaa 1535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 25954799 - 25954746
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  25954799 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 25954746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 35018985 - 35018932
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| |||||||||||||||||||||||||| | || |||||||||||||||||    
T  35018985 ttttttattatttgcttgcaatttcttatgtaca-ccttataaatgtgttgcaaa 35018932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 37801343 - 37801396
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  37801343 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 37801396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 16338323 - 16338375
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  16338323 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 16338375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 33982040 - 33981997
Alignment:
Q  161 tttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||| |||||||||||| | ||||||||||||||    
T  33982040 tttgcttgcaattttttatgtaaacccatgtaaatgtgttgcaa 33981997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 47084053 - 47084014
Alignment:
Q  166 ttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  47084053 ttgcaatttcttatgtaaacacctataaaggtgttgcaaa 47084014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 34241042 - 34240993
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||    
T  34241042 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttg 34240993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 49284406 - 49284353
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| |||||||| |||||||||||||||| |  ||||||||||||||||||||    
T  49284406 ttttttattatttgtttgcaatttcttatgt-acgccctataaatgtgttgcaaa 49284353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 52632559 - 52632514
Alignment:
Q  159 tatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||    
T  52632559 tatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 52632514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 54090236 - 54090176
Alignment:
Q  143 ttttagattttttgattatttgcttgcaa-tttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||| ||||||| |||||||||||    
T  54090236 ttttagatttttt-attatttgcttgcaatttttttatgtaaa-ccctatagatgtgttgcaa 54090176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 19124811 - 19124871
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||| ||||||| ||||||| ||| ||||||||||||||||  |||||| || ||||||||    
T  19124811 tttaaatttttttattatttacttacaatttcttatgtaaattcctatacatttgttgcaa 19124871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 44362906 - 44362962
Alignment:
Q  84 taggcttaattacagttttggtcccctaattttcaattttatgtagaattggtcccc 140  Q
    ||||||||||| ||||||||||||||  |||||||   || ||||||||||||||||    
T  44362906 taggcttaattgcagttttggtccccctattttcaccattttgtagaattggtcccc 44362962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 1781817 - 1781757
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1781817 tttagattttttgattatttgcttgcaatttcgtatgtaaacccctataaatgtgttgcaa 1781757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 10839453 - 10839514
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  10839453 tttagattttttgattatttgcttgcaatttcttatgtaaacacctatacatgtgttgcaaa 10839514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 48206910 - 48206848
Alignment:
Q  143 ttttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||    
T  48206910 ttttagattttttgattatttacttgcaatttcttatgtaaacacttataaatgtgttgcaaa 48206848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 8926819 - 8926762
Alignment:
Q  146 tagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgca 203  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  8926819 tagattttttgattatttgcttgcaatttcttatgttaacccttataaatgtgttgca 8926762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 20382574 - 20382514
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  20382574 tttagatttttttattatttgcttgcaatttcttatgtaaactcctataaatgcgttgcaa 20382514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 36539687 - 36539627
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  36539687 tttaaattttttgattatttgtttgcaatttcctatgtaaacccctataaatgtgttgcaa 36539627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 19649445 - 19649506
Alignment:
Q  144 tttagattttttg-attatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||    
T  19649445 tttagattttttggattatttgcttgcaatttcttatgtaattccctataaatgtgttgcaa 19649506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 36826027 - 36826087
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||| ||||||| || ||||||||||| |||||||||||||||||||||||||||||||||    
T  36826027 tttaaattttttaatgatttgcttgcagtttcttatgtaaacccctataaatgtgttgcaa 36826087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 43347409 - 43347468
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||    
T  43347409 tttagattttttgattatttgcttgcaatttcttatgtaaa-ccctataattatgttgcaa 43347468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 151 - 200
Target Start/End: Complemental strand, 54546953 - 54546904
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgtt 200  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  54546953 tttttgattatttgcttacaatttcttatgtaaatccctataaatgtgtt 54546904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 19644400 - 19644458
Alignment:
Q  143 ttttagattttttg-attatttgcttgcaatttcttatgtaaacccctataaatgtgtt 200  Q
    |||||||||||||| |||||||| ||||||||||||||||||  |||||||||||||||    
T  19644400 ttttagattttttggattatttgattgcaatttcttatgtaattccctataaatgtgtt 19644458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 33103792 - 33103738
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| |||||||||||| ||||||||||||||| || |||||||||||||||||    
T  33103792 ttttttattatttgcttgtaatttcttatgtaaatccttataaatgtgttgcaaa 33103738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 47315183 - 47315237
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||||||  |||||||||||||||||||| ||||||||| ||||||||    
T  47315183 ttttttgattatttatttgcaatttcttatgtaaactcctataaatatgttgcaa 47315237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 3178745 - 3178699
Alignment:
Q  158 ttatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  3178745 ttatttgcttgcaatttcgtatgtaaactcctataaatatgttgcaa 3178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 5391506 - 5391453
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  5391506 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 5391453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 6280438 - 6280492
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||||||| |||||||||| |||| |||||||||||  |||||||||||||||||    
T  6280438 tttttgataatttgcttgccattttttatgtaaacctttataaatgtgttgcaaa 6280492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 23467573 - 23467626
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  23467573 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 23467626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 40845996 - 40846049
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  40845996 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 40846049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 44995048 - 44995101
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  44995048 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 44995101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 13856148 - 13856096
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  13856148 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 13856096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 21853246 - 21853194
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  21853246 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 21853194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 50663180 - 50663136
Alignment:
Q  161 tttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||| ||||||||||||||||| |||||||||||| ||||||    
T  50663180 tttgcttccaatttcttatgtaaactcctataaatgtgatgcaaa 50663136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 791869 - 791812
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||| |||||||||||||||   || |||||||||||||||| ||||| ||||||||||||    
T  791869 tttatattttttgattattt---tgtaatttcttatgtaaacacctattaatgtgttgcaa 791812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 32352896 - 32352843
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||| ||||||||||||| |  ||||||||||||||||||||    
T  32352896 ttttttattatttgcttacaatttcttatgt-acgccctataaatgtgttgcaaa 32352843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 51336258 - 51336208
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    ||||| ||||||| |||||||||||||| ||||||  ||||||||||||||    
T  51336258 ttttttattatttacttgcaatttcttacgtaaacttctataaatgtgttg 51336208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 46685862 - 46685903
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctata 192  Q
    ||||| |||||||| ||||||||||||||| |||||||||||    
T  46685862 ttttttattatttgtttgcaatttcttatgcaaacccctata 46685903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 26835394 - 26835332
Alignment:
Q  143 ttttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  26835394 ttttagattttttgattatttgcttgcaatttctcatgtaaacccatataaatgtgttgcaaa 26835332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 38859907 - 38859849
Alignment:
Q  143 ttttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38859907 ttttagatttttttattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 38859849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 30252818 - 30252875
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30252818 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatatgttg 30252875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 10907721 - 10907781
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  10907721 tttagattttttgattatttgcttgcaatttcttatgtagacacctataaatgtgttgcaa 10907781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 44107464 - 44107522
Alignment:
Q  147 agattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||    
T  44107464 agattttttgattatttacttgcaatttcttatgtaaaaccttataaatgtgttgcaaa 44107522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 14796931 - 14796871
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||    
T  14796931 tttagatttttcgaatatttgcttgcaatttcttatgtaaacccgtataaatgtattgcaa 14796871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 14805805 - 14805745
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||||||||| ||||||    
T  14805805 tttagatttttcgaatatttgcttgcaatttcttatgtaaacccgtataaatgtattgcaa 14805745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 37189358 - 37189304
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtg 198  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  37189358 tttaaattttttgattatttgtttgcaatttcttatgtaaacctctataaatgtg 37189304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 1106822 - 1106773
Alignment:
Q  153 tttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgc 202  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  1106822 tttgattatttgcttgcaatttcttatgtaaattcttataaatgtgttgc 1106773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 248
Target Start/End: Original strand, 48392485 - 48392581
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaannnnnnnacccaggctttacaataatcctagctccgccactgc 248  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||        ||| | |||||||||| |||| |||||||||||||    
T  48392485 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaatttttttgcccggactttacaatattcctggctccgccactgc 48392581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 3346835 - 3346782
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  3346835 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 3346782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 5558358 - 5558308
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||| |||||    
T  5558358 tttttgattatttgcttgcaatttcatatataaactcctataaatatgttg 5558308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 7742858 - 7742911
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  7742858 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 7742911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 10156095 - 10156148
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  10156095 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 10156148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 30745399 - 30745357
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacc 186  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  30745399 tttaaattttttgattatttacttgcaatttcttatgtaaacc 30745357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 30766850 - 30766808
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacc 186  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  30766850 tttaaattttttgattatttacttgcaatttcttatgtaaacc 30766808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 42517377 - 42517430
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  42517377 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 42517430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 44462560 - 44462614
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||| |||||| |||||||| |||||||||| |||| ||||||||    
T  44462560 ttttttgattatttacttgcagtttcttatataaacccctaaaaatatgttgcaa 44462614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 49902517 - 49902464
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  49902517 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 49902464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 23908334 - 23908282
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  23908334 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 23908282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 42456606 - 42456566
Alignment:
Q  165 cttgcaatttcttatgtaaa-cccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  42456606 cttgcaatttcttatgtaaatcccctataaatgtgttgcaa 42456566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 2756256 - 2756294
Alignment:
Q  166 ttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  2756256 ttgcaatttcttatgtaaactcctataaatatgttgcaa 2756294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 5975037 - 5974988
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||    
T  5975037 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttg 5974988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 8430514 - 8430556
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacc 186  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||    
T  8430514 tttaaatttttttattatttgcttgcaatttcttatgttaacc 8430556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 26511712 - 26511766
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||||||||| ||| |||||||||| ||||| |||||||||| || ||||||    
T  26511712 tttttgattatttacttacaatttcttacgtaaatccctataaatttggtgcaaa 26511766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 29149627 - 29149680
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||| ||||||||||||    
T  29149627 ttttttattatttgcttgcaatttcttatgt-acgccctatacatgtgttgcaaa 29149680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 45968716 - 45968683
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaa 184  Q
    ||||||||||||| ||||||||||||||||||||    
T  45968716 tttttgattatttacttgcaatttcttatgtaaa 45968683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 9e-19; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 10334233 - 10334173
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  10334233 tttagatatttttaatatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 10334173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 17303194 - 17303248
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  17303194 tttttttattatttgcttgcaatttcttatgtaaaccactataaatgtgttgcaa 17303248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 26284451 - 26284510
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  26284451 tttagatttttt-attattttcttgcaatttcttttgtaaacccctataaatgtgttgcaa 26284510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 33057730 - 33057789
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||    
T  33057730 tttagatttttttattatttgcttgcaatttcttatgtaaa-tcctataaatgtgttgcaa 33057789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 2702292 - 2702354
Alignment:
Q  143 ttttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||||||||| ||||||| | ||||||||||||||||||||| || |||| |||||||||    
T  2702292 ttttagatttttttattattttcatgcaatttcttatgtaaacccataaaaatatgttgcaaa 2702354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 41853182 - 41853128
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||||||||  ||| |||||| |||||||||||||||||    
T  41853182 ttttttgattatttgcttgcaattttctatataaacctctataaatgtgttgcaa 41853128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 19334640 - 19334693
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||| ||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  19334640 tttttttattatttgcttgcaatttcttatataaa-ccctataaatttgttgcaa 19334693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 24320518 - 24320571
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  24320518 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 24320571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 25128163 - 25128209
Alignment:
Q  159 tatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  25128163 tatttgcatgcaatttcttatgtaaacccatataaatatgttgcaaa 25128209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 29556018 - 29556071
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  29556018 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 29556071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 44164822 - 44164875
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  44164822 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 44164875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 34707165 - 34707113
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  34707165 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 34707113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 43342454 - 43342415
Alignment:
Q  166 ttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  43342454 ttgcaatttcttatgtaaacacctataaatgtgtttcaaa 43342415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 10576722 - 10576669
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||| |||||||    
T  10576722 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtattgcaaa 10576669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 29238222 - 29238275
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||| ||||||||||||| |  ||||||||||||||||||||    
T  29238222 ttttttattatttgcttacaatttcttatgt-aggccctataaatgtgttgcaaa 29238275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 32876609 - 32876662
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  | ||||||||||||||||||    
T  32876609 ttttttattatttgcttgcaatttcttatgt-acgctctataaatgtgttgcaaa 32876662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 23032198 - 23032243
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccct 189  Q
    ||||||||||||||||||||||||| ||||| |||| |||| ||||    
T  23032198 tttagattttttgattatttgcttgtaattttttatctaaatccct 23032243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 13103191 - 13103246
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgt 199  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  13103191 tttagattttttgattatttgcttgcaatttctaatgtaaacacctataaatgtgt 13103246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 24500773 - 24500830
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  24500773 tttagatttttttattatttgcttgcaatttcatatgtaaacccttataaatgtgttg 24500830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 11279595 - 11279536
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  11279595 tttagatttttt-attatttgcttgcaatttcttatgtaaatctctataaatgtgttgcaa 11279536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 28750729 - 28750783
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  28750729 ttttttgattatttgcttgtaatttcttatgtaaactcttataaatgtgttgcaa 28750783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 27863754 - 27863694
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||||||||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  27863754 tttagatttttt-attatttgtttgcaatttcttatgtaaacatctataaatgtgttgcaaa 27863694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 34103740 - 34103638
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaannnnnnnacccaggctttacaataatcctagctccgcc 243  Q
    |||||||||||| |||||||| |||||||||||||||||||||  | ||||||||||||||         || |||||||| ||||||||| ||||||||    
T  34103740 tttagatttttt-attatttgtttgcaatttcttatgtaaacctttgtaaatgtgttgcaatttattttgcctaggctttataataatcctggctccgcc 34103642  T
Q  244 actg 247  Q
    ||||    
T  34103641 actg 34103638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 11084661 - 11084606
Alignment:
Q  149 attttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  11084661 atttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 11084606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 11212720 - 11212669
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgc 202  Q
    ||||| |||||||||||| |||||||||||||||  ||||||||||||||||    
T  11212720 tttttaattatttgcttgtaatttcttatgtaaattcctataaatgtgttgc 11212669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 14309877 - 14309930
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  14309877 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 14309930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 24694730 - 24694783
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  24694730 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 24694783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 9231933 - 9231985
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  9231933 ttttttattatttgcttgcaatttcttatgt-atgccctataaatgtgttgcaa 9231985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 8415353 - 8415407
Alignment:
Q  149 attttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||| |||||| |||||||||||||||||| ||||||| ||||||| ||||||    
T  8415353 atttttttattatt-gcttgcaatttcttatgttaacccctttaaatgtattgcaa 8415407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 7517072 - 7517026
Alignment:
Q  143 ttttagattttttgattatttgcttgcaatttcttatgtaaacccct 189  Q
    ||||||||||||| || ||||||||||||||||||| ||||| ||||    
T  7517072 ttttagatttttttatcatttgcttgcaatttcttaagtaaaaccct 7517026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 34383475 - 34383503
Alignment:
Q  220 ctttacaataatcctagctccgccactgc 248  Q
    |||||||||||||||||||||||||||||    
T  34383475 ctttacaataatcctagctccgccactgc 34383503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 28321781 - 28321836
Alignment:
Q  149 attttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  28321781 attttttgattatttgcttccaatttcttatataaacccctataaatgtgttgcaa 28321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 1387361 - 1387421
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||    
T  1387361 tttagatttttt-attatttgcttgcaatttcttatgtaaacccttacaaatgtgttgcaaa 1387421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 14539777 - 14539838
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  14539777 tttagatttttttattattttcttgcaatttcttatataaacacctataaatgtgttgcaaa 14539838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 40780111 - 40780050
Alignment:
Q  143 ttttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  40780111 ttttaaattttttaattatttgcttgcaatttcttatgtaaaccgctataaatatgttgcaa 40780050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 23685451 - 23685503
Alignment:
Q  152 ttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  23685451 ttttgattatttgcttgcaatttcttatgtaaacccttataaatatgttgcaa 23685503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 32486296 - 32486239
Alignment:
Q  147 agattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||||||| ||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  32486296 agattttttaattatttgcttgcaatttcttatataaacacttataaatgtgttgcaa 32486239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 41674786 - 41674841
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||||| | ||||||||||||||||||||| |||| ||||||||||||||||||||    
T  41674786 ttttttaactatttgcttgcaatttcttatataaatccctataaatgtgttgcaaa 41674841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 6318538 - 6318592
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||| |||||||||||||||||||  |||||| ||||||||||||||||||||    
T  6318538 tttttttattatttgcttgcaatttcaaatgtaagcccctataaatgtgttgcaa 6318592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 33009728 - 33009666
Alignment:
Q  144 tttagattttt-tgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||||||| | |||||||||||||||||| |||||||||||| |||||| ||||||||||    
T  33009728 tttagatttttattattatttgcttgcaattttttatgtaaacccatataaacgtgttgcaaa 33009666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 3956620 - 3956567
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| |||||||||||||||||||  ||||||||| |||||||||||||||||    
T  3956620 ttttttattatttgcttgcaatttcaaatgtaaacctctataaatgtgttgcaa 3956567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 2250528 - 2250473
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||||| ||||||| |||||||||| |||| |||||||| ||||||||||||||||    
T  2250528 ttttttaattatttacttgcaatttattatataaaccccaataaatgtgttgcaaa 2250473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 2888097 - 2888039
Alignment:
Q  143 ttttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    ||||||||||||| |||| ||||| ||||  |||||||||||||||||||||| |||||    
T  2888097 ttttagatttttttattaattgctagcaaagtcttatgtaaacccctataaatatgttg 2888039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 19181597 - 19181544
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  19181597 ttttttattatttgcttgcaatttcttatgt-atgccctataaatgtgttgcaaa 19181544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 40277367 - 40277420
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  40277367 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 40277420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 42769837 - 42769890
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  42769837 ttttttattatttgcttgcaatttcttatgt-atgccctataaatgtgttgcaaa 42769890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 43139795 - 43139741
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||| ||||||||||||||||||||||| ||||| |||| ||||| |||||||    
T  43139795 tttttttattatttgcttgcaatttcttatataaacacctacaaatgcgttgcaa 43139741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 14186518 - 14186570
Alignment:
Q  152 ttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  14186518 tttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 14186570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 29846491 - 29846439
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  29846491 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 29846439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 201
Target Start/End: Complemental strand, 25665273 - 25665222
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    ||||||||||||||||||||||||| ||||  ||||| |||||||| |||||    
T  25665273 ttttttgattatttgcttgcaattttttatacaaaccgctataaatatgttg 25665222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 14942123 - 14942176
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  || |||||||||||||||||    
T  14942123 ttttttattatttgcttgcaatttcttatgt-acgccttataaatgtgttgcaaa 14942176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 34525 - 34582
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||    
T  34525 tttagattttttgattatttgcttacaatttcttatgtaaactcctataaacgtgttg 34582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 8e-16; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 10112097 - 10112042
Alignment:
Q  149 attttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  10112097 attttttgattatttatttgcaatttcttatgtaaacccctataaatatgttgcaa 10112042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 35806843 - 35806790
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  35806843 ttttttattatttgcttgcaatttcttatgtaca-ccctataaatgtgttgcaaa 35806790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 26021451 - 26021391
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||| ||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  26021451 tttacatttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 26021391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 2824270 - 2824314
Alignment:
Q  160 atttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||    
T  2824270 atttgcttgcaatttcttatgtaaacacctttaaatgtgttgcaa 2824314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 16819061 - 16819105
Alignment:
Q  157 attatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    |||||||||||||||||| |||| |||||||||||||||||||||    
T  16819061 attatttgcttgcaattttttatataaacccctataaatgtgttg 16819105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 21525407 - 21525354
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  21525407 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 21525354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 33934448 - 33934501
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  33934448 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaaa 33934501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 34697468 - 34697522
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||| ||||||||||||||||||||||||||||  | ||||||| ||||||||    
T  34697468 tttttttattatttgcttgcaatttcttatgtaaattcttataaatatgttgcaa 34697522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 205
Target Start/End: Complemental strand, 42072477 - 42072424
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| |||||||||||||||||||||||||||| |  |||||||||||||||||    
T  42072477 ttttttattatttgcttgcaatttcttatgtaaa-caatataaatgtgttgcaaa 42072424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 16523125 - 16523064
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||| || | |||||||||||||||||| ||||| ||||||  ||||||||||||||||    
T  16523125 tttagatattcttattatttgcttgcaattttttatgcaaaccctcataaatgtgttgcaaa 16523064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 19334838 - 19334778
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    |||| ||| ||| ||||||||||| ||||||||||||| ||||||||||||| |||||||||    
T  19334838 tttaaattgttttattatttgcttacaatttcttatgt-aacccctataaatatgttgcaaa 19334778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 22324645 - 22324593
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  22324645 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 22324593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 16591440 - 16591476
Alignment:
Q  168 gcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||||||||||||||||||| ||||||||||||||||    
T  16591440 gcaatttcttatgtaaacccttataaatgtgttgcaa 16591476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 2271246 - 2271196
Alignment:
Q  156 gattatttgcttgcaatttcttatgtaaacccc-tataaatgtgttgcaaa 205  Q
    |||| ||| ||| |||||||||||||||||||| |||||||||||||||||    
T  2271246 gattttttacttacaatttcttatgtaaaccccctataaatgtgttgcaaa 2271196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 185
Target Start/End: Complemental strand, 24065322 - 24065288
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaac 185  Q
    ||||| |||||||||||||||||||||||||||||    
T  24065322 ttttttattatttgcttgcaatttcttatgtaaac 24065288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 42013921 - 42013872
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttg 201  Q
    ||||| ||||||||||||||||||||||||| |  ||||||||||||||||    
T  42013921 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttg 42013872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 21488121 - 21488082
Alignment:
Q  144 tttagattttttgattatttgcttgcaatttcttatgtaaa 184  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  21488121 tttagatttttttattatt-gcttgcaatttcttatgtaaa 21488082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 43282932 - 43282984
Alignment:
Q  152 ttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    |||| ||||||||||||| ||||||||||||||   |||||||||| ||||||    
T  43282932 tttttattatttgcttgctatttcttatgtaaatatctataaatgtattgcaa 43282984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 85550 - 85505
Alignment:
Q  160 atttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||    
T  85550 atttgcttgcaatttcttatgtaaacctctataaatatgttgcaaa 85505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 20902 - 20957
Alignment:
Q  150 ttttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaaa 205  Q
    ||||| |||| ||||||||||||||||||||||||  | |||||||||||||||||    
T  20902 tttttagattttttgcttgcaatttcttatgtaaattcgtataaatgtgttgcaaa 20957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 54537 - 54485
Alignment:
Q  151 tttttgattatttgcttgcaatttcttatgtaaacccctataaatgtgttgcaa 204  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||    
T  54537 ttttttattatttgcttgcaatttcttatgt-acgccctataaatgtgttgcaa 54485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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