View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7769_low_27 (Length: 312)

Name: NF7769_low_27
Description: NF7769
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7769_low_27
NF7769_low_27
[»] scaffold0159 (1 HSPs)
scaffold0159 (5-305)||(33194-33492)
[»] chr2 (25 HSPs)
chr2 (5-305)||(5788821-5789119)
chr2 (5-305)||(3395400-3395698)
chr2 (168-305)||(36720068-36720205)
chr2 (177-274)||(29977339-29977436)
chr2 (215-296)||(41754117-41754198)
chr2 (165-259)||(19040696-19040789)
chr2 (152-300)||(34425545-34425692)
chr2 (165-259)||(39839082-39839175)
chr2 (155-255)||(29651760-29651860)
chr2 (179-271)||(36727615-36727707)
chr2 (172-283)||(38796791-38796902)
chr2 (5-93)||(41754533-41754620)
chr2 (165-274)||(36729254-36729363)
chr2 (180-283)||(41753978-41754081)
chr2 (186-300)||(24967965-24968078)
chr2 (177-274)||(45053703-45053800)
chr2 (217-289)||(29975885-29975957)
chr2 (7-307)||(6465994-6466287)
chr2 (190-264)||(19994417-19994490)
chr2 (155-204)||(40599682-40599731)
chr2 (155-255)||(45659829-45659927)
chr2 (238-289)||(29976586-29976637)
chr2 (178-309)||(31963646-31963777)
chr2 (178-256)||(20106660-20106738)
chr2 (194-287)||(39405916-39406009)
[»] chr4 (46 HSPs)
chr4 (5-305)||(13228533-13228830)
chr4 (4-257)||(49953018-49953272)
chr4 (4-220)||(39974683-39974898)
chr4 (69-309)||(281823-282059)
chr4 (134-300)||(55050004-55050168)
chr4 (149-263)||(6554517-6554631)
chr4 (179-263)||(42729463-42729545)
chr4 (134-230)||(28475656-28475752)
chr4 (150-246)||(50158172-50158268)
chr4 (116-249)||(26289997-26290128)
chr4 (5-93)||(50814634-50814721)
chr4 (118-255)||(11559461-11559598)
chr4 (177-274)||(13910148-13910245)
chr4 (181-274)||(14285276-14285369)
chr4 (133-307)||(42757527-42757698)
chr4 (167-246)||(24183432-24183510)
chr4 (154-300)||(17675240-17675385)
chr4 (149-307)||(42756767-42756925)
chr4 (178-274)||(316508-316604)
chr4 (152-256)||(13230882-13230986)
chr4 (210-274)||(14265626-14265690)
chr4 (149-263)||(314299-314413)
chr4 (174-240)||(4237127-4237193)
chr4 (155-256)||(6560964-6561065)
chr4 (178-307)||(24182446-24182575)
chr4 (155-204)||(52543045-52543094)
chr4 (155-255)||(13668174-13668274)
chr4 (155-255)||(13681031-13681131)
chr4 (174-263)||(48683181-48683272)
chr4 (152-199)||(22681272-22681319)
chr4 (178-253)||(36697769-36697844)
chr4 (147-274)||(42727902-42728029)
chr4 (209-271)||(3773729-3773791)
chr4 (174-240)||(4280461-4280527)
chr4 (240-274)||(27668261-27668295)
chr4 (141-307)||(35648523-35648689)
chr4 (237-274)||(282755-282792)
chr4 (155-256)||(11560199-11560299)
chr4 (232-309)||(13909849-13909926)
chr4 (178-259)||(35695054-35695134)
chr4 (237-270)||(55051962-55051995)
chr4 (156-204)||(13919329-13919377)
chr4 (212-288)||(14266234-14266310)
chr4 (243-307)||(22681165-22681229)
chr4 (178-309)||(28474835-28474967)
chr4 (180-248)||(56340282-56340350)
[»] chr8 (46 HSPs)
chr8 (4-296)||(42797242-42797532)
chr8 (5-296)||(23141752-23142042)
chr8 (5-296)||(13756376-13756666)
chr8 (148-305)||(10901390-10901547)
chr8 (4-261)||(21588824-21589082)
chr8 (116-295)||(16313202-16313379)
chr8 (149-305)||(30254504-30254663)
chr8 (116-295)||(34800772-34800949)
chr8 (118-290)||(38290486-38290658)
chr8 (152-284)||(45247765-45247897)
chr8 (152-286)||(23686598-23686732)
chr8 (116-248)||(16250039-16250169)
chr8 (133-249)||(37251164-37251278)
chr8 (152-264)||(40885741-40885853)
chr8 (153-264)||(23683105-23683216)
chr8 (155-309)||(13758881-13759030)
chr8 (149-263)||(41527026-41527140)
chr8 (152-204)||(40260477-40260529)
chr8 (180-283)||(23141613-23141716)
chr8 (178-268)||(26622847-26622938)
chr8 (180-283)||(42797103-42797206)
chr8 (153-271)||(14376132-14376250)
chr8 (178-256)||(17888052-17888130)
chr8 (232-290)||(45528252-45528310)
chr8 (178-307)||(15276766-15276895)
chr8 (178-307)||(15457135-15457264)
chr8 (241-274)||(24482019-24482052)
chr8 (150-206)||(8357693-8357749)
chr8 (178-274)||(15274859-15274955)
chr8 (178-274)||(15455228-15455324)
chr8 (174-274)||(16220254-16220354)
chr8 (209-264)||(357546-357601)
chr8 (221-264)||(13758078-13758121)
chr8 (185-300)||(16221541-16221656)
chr8 (180-247)||(17871244-17871311)
chr8 (179-242)||(18953362-18953425)
chr8 (133-204)||(23525197-23525268)
chr8 (154-296)||(10279043-10279185)
chr8 (114-204)||(35226668-35226758)
chr8 (168-221)||(758098-758151)
chr8 (153-202)||(5685867-5685916)
chr8 (237-274)||(21588051-21588088)
chr8 (237-270)||(34803420-34803453)
chr8 (155-271)||(15342286-15342402)
chr8 (155-271)||(15431351-15431467)
chr8 (155-271)||(15522655-15522771)
[»] chr5 (22 HSPs)
chr5 (5-307)||(38015878-38016177)
chr5 (155-256)||(9012711-9012812)
chr5 (4-127)||(33014000-33014122)
chr5 (116-295)||(29865827-29866004)
chr5 (116-249)||(8128432-8128563)
chr5 (173-263)||(9024952-9025042)
chr5 (176-270)||(20966121-20966215)
chr5 (152-300)||(4062136-4062282)
chr5 (186-300)||(10175893-10176006)
chr5 (185-281)||(25545697-25545793)
chr5 (180-264)||(27594557-27594641)
chr5 (152-300)||(7332884-7333030)
chr5 (174-261)||(33013892-33013981)
chr5 (155-270)||(19318893-19319006)
chr5 (176-300)||(19910558-19910682)
chr5 (238-297)||(42954441-42954500)
chr5 (154-220)||(11770399-11770465)
chr5 (237-270)||(4064070-4064103)
chr5 (237-270)||(29863373-29863406)
chr5 (155-204)||(33009855-33009903)
chr5 (229-290)||(36567241-36567302)
chr5 (172-204)||(2260855-2260887)
[»] chr1 (29 HSPs)
chr1 (5-305)||(43387047-43387344)
chr1 (124-261)||(22636310-22636447)
chr1 (165-263)||(20306723-20306820)
chr1 (165-259)||(40946518-40946611)
chr1 (165-259)||(1992421-1992514)
chr1 (165-259)||(30001736-30001829)
chr1 (154-290)||(47783134-47783270)
chr1 (133-307)||(34159485-34159657)
chr1 (116-249)||(17006492-17006623)
chr1 (194-300)||(26531519-26531623)
chr1 (152-286)||(22541885-22542019)
chr1 (159-256)||(43385727-43385824)
chr1 (151-271)||(49879097-49879217)
chr1 (134-204)||(3838181-3838251)
chr1 (134-231)||(8313411-8313508)
chr1 (152-257)||(15524702-15524807)
chr1 (183-264)||(19065742-19065823)
chr1 (183-264)||(19113632-19113713)
chr1 (183-260)||(21469816-21469893)
chr1 (152-264)||(7844607-7844719)
chr1 (176-264)||(43385109-43385197)
chr1 (173-204)||(3982729-3982760)
chr1 (179-285)||(39048327-39048433)
chr1 (185-271)||(49878367-49878452)
chr1 (167-228)||(16851963-16852024)
chr1 (237-270)||(17001163-17001196)
chr1 (183-264)||(22538395-22538476)
chr1 (209-307)||(31088734-31088834)
chr1 (237-270)||(34162064-34162097)
[»] chr6 (33 HSPs)
chr6 (29-292)||(1599546-1599808)
chr6 (10-224)||(26894748-26894961)
chr6 (165-259)||(7428479-7428572)
chr6 (102-297)||(29214239-29214433)
chr6 (133-300)||(23410037-23410202)
chr6 (165-259)||(16279074-16279167)
chr6 (180-269)||(31737199-31737288)
chr6 (124-284)||(2976645-2976805)
chr6 (223-305)||(24397965-24398047)
chr6 (133-249)||(20872442-20872556)
chr6 (179-300)||(24175021-24175141)
chr6 (183-264)||(33350291-33350372)
chr6 (154-256)||(4031518-4031618)
chr6 (174-309)||(11554334-11554469)
chr6 (152-283)||(21988808-21988939)
chr6 (165-255)||(28365724-28365813)
chr6 (181-274)||(9452845-9452938)
chr6 (183-264)||(21984182-21984263)
chr6 (178-309)||(34515092-34515224)
chr6 (180-283)||(1599848-1599951)
chr6 (174-309)||(4852809-4852944)
chr6 (224-307)||(18089938-18090021)
chr6 (155-270)||(19660311-19660426)
chr6 (173-262)||(9449601-9449690)
chr6 (253-297)||(26894967-26895011)
chr6 (178-256)||(15878847-15878925)
chr6 (165-263)||(26597588-26597684)
chr6 (185-282)||(20873794-20873889)
chr6 (210-307)||(22826721-22826818)
chr6 (237-282)||(23407550-23407595)
chr6 (155-204)||(27436867-27436916)
chr6 (152-204)||(20874179-20874231)
chr6 (224-300)||(26595900-26595976)
[»] chr3 (37 HSPs)
chr3 (151-296)||(50331915-50332060)
chr3 (4-220)||(36095949-36096164)
chr3 (165-263)||(20934987-20935084)
chr3 (165-263)||(32976461-32976558)
chr3 (5-117)||(50332062-50332173)
chr3 (165-259)||(42400377-42400470)
chr3 (4-146)||(12746101-12746241)
chr3 (116-295)||(19817358-19817535)
chr3 (165-263)||(17764120-17764217)
chr3 (165-263)||(19065440-19065537)
chr3 (166-307)||(431968-432109)
chr3 (177-274)||(25225306-25225403)
chr3 (152-264)||(40056502-40056614)
chr3 (173-282)||(34849788-34849897)
chr3 (176-264)||(14044290-14044378)
chr3 (178-274)||(32970437-32970533)
chr3 (153-264)||(30171172-30171283)
chr3 (178-282)||(20779566-20779670)
chr3 (152-284)||(39187291-39187423)
chr3 (213-269)||(40417860-40417916)
chr3 (174-274)||(52753015-52753115)
chr3 (155-283)||(9611703-9611832)
chr3 (212-287)||(10020152-10020227)
chr3 (168-269)||(6087831-6087930)
chr3 (177-307)||(32971108-32971238)
chr3 (183-264)||(20788453-20788534)
chr3 (178-271)||(37837511-37837604)
chr3 (178-274)||(6438865-6438961)
chr3 (180-295)||(39183069-39183183)
chr3 (141-307)||(20934187-20934353)
chr3 (168-237)||(12125579-12125648)
chr3 (152-257)||(30169901-30170006)
chr3 (154-295)||(37836673-37836814)
chr3 (155-196)||(44904856-44904897)
chr3 (178-263)||(50241485-50241570)
chr3 (173-205)||(2250975-2251007)
chr3 (178-274)||(9268349-9268445)
[»] scaffold0036 (1 HSPs)
scaffold0036 (50-307)||(50164-50421)
[»] scaffold0380 (2 HSPs)
scaffold0380 (184-309)||(14522-14647)
scaffold0380 (12-143)||(14373-14503)
[»] chr7 (20 HSPs)
chr7 (165-263)||(43989681-43989778)
chr7 (116-300)||(29912532-29912714)
chr7 (134-299)||(38788897-38789060)
chr7 (154-307)||(45406685-45406838)
chr7 (97-237)||(17510234-17510374)
chr7 (97-237)||(17542840-17542980)
chr7 (154-249)||(2452101-2452195)
chr7 (193-298)||(22528932-22529037)
chr7 (159-251)||(4120006-4120098)
chr7 (97-237)||(17474750-17474890)
chr7 (97-237)||(17578324-17578464)
chr7 (167-274)||(42078941-42079050)
chr7 (166-307)||(42080812-42080952)
chr7 (178-297)||(6677088-6677207)
chr7 (154-299)||(20181326-20181468)
chr7 (178-255)||(4110362-4110437)
chr7 (182-248)||(24708451-24708517)
chr7 (153-202)||(15464394-15464443)
chr7 (184-256)||(2929446-2929518)
chr7 (154-202)||(5785971-5786019)
[»] scaffold0024 (1 HSPs)
scaffold0024 (135-300)||(47112-47277)
[»] scaffold1345 (1 HSPs)
scaffold1345 (165-261)||(1847-1942)
[»] scaffold0074 (1 HSPs)
scaffold0074 (146-305)||(30812-30970)
[»] scaffold1750 (1 HSPs)
scaffold1750 (165-263)||(274-371)
[»] scaffold0012 (1 HSPs)
scaffold0012 (133-295)||(30977-31137)
[»] scaffold0191 (3 HSPs)
scaffold0191 (149-246)||(5137-5233)
scaffold0191 (177-274)||(12543-12640)
scaffold0191 (219-309)||(12231-12321)
[»] scaffold0169 (1 HSPs)
scaffold0169 (117-261)||(2229-2376)
[»] scaffold0377 (1 HSPs)
scaffold0377 (157-274)||(12535-12654)
[»] scaffold0268 (1 HSPs)
scaffold0268 (133-300)||(19811-19976)
[»] scaffold0216 (1 HSPs)
scaffold0216 (155-255)||(29168-29268)
[»] scaffold0051 (1 HSPs)
scaffold0051 (173-289)||(12571-12687)
[»] scaffold0284 (2 HSPs)
scaffold0284 (178-309)||(7537-7668)
scaffold0284 (174-270)||(6410-6506)
[»] scaffold0114 (2 HSPs)
scaffold0114 (149-263)||(37016-37130)
scaffold0114 (181-269)||(1376-1464)
[»] scaffold1743 (1 HSPs)
scaffold1743 (178-307)||(188-316)
[»] scaffold1315 (1 HSPs)
scaffold1315 (217-307)||(563-652)
[»] scaffold1293 (1 HSPs)
scaffold1293 (217-307)||(1419-1508)
[»] scaffold0053 (1 HSPs)
scaffold0053 (166-307)||(31029-31169)
[»] scaffold0021 (2 HSPs)
scaffold0021 (156-253)||(128292-128389)
scaffold0021 (181-274)||(127586-127679)
[»] scaffold0061 (2 HSPs)
scaffold0061 (238-290)||(45618-45670)
scaffold0061 (224-307)||(44876-44959)
[»] scaffold0017 (2 HSPs)
scaffold0017 (238-290)||(153117-153169)
scaffold0017 (224-307)||(153828-153911)
[»] scaffold1737 (2 HSPs)
scaffold1737 (185-282)||(125-220)
scaffold1737 (152-204)||(510-562)
[»] scaffold0211 (1 HSPs)
scaffold0211 (214-255)||(19948-19989)
[»] scaffold0119 (1 HSPs)
scaffold0119 (133-249)||(40553-40667)
[»] scaffold0003 (1 HSPs)
scaffold0003 (155-204)||(50446-50495)
[»] scaffold0155 (1 HSPs)
scaffold0155 (11-70)||(22749-22806)


Alignment Details
Target: scaffold0159 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 33492 - 33194
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33492 acatcattctcacttgtgtgattgctctttctgcaatgtgtcatcattcacacaagtgttggctccccataagtctcaatgttgatatcatacccgcttc 33393  T
Q  105 aacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33392 aacatttttgggaagcggaagtggttcgtggtggtggatcgcagacacagagagtctcatacttaatgaagagatgttaatgtgtcaaatgtgagttaaa 33293  T
Q  205 ataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatc 304  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |||    
T  33292 ataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc--atatctaatgtcttaagattttgggtgaagttgtgatgtcaatc 33195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 254; Significance: 1e-141; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 5789119 - 5788821
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5789119 acatcattctcacttgtgtgattgctctttctgcaatgtgtcatcattcacacaagtgttggctccccataagtctcaatgttgatatcatacccgcttc 5789020  T
Q  105 aacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5789019 aacatttttgggaagcggaagtggttcgtggtggtggatcgcagacacagagagtctcatacttaatgaagagatgttaatgtgtcaaatgtgagttaaa 5788920  T
Q  205 ataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatc 304  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |||    
T  5788919 ataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactc--atatctaatgtcttaagattttgggtgaagttgtgatgtcaatc 5788822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 3395698 - 3395400
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    |||||||| |||||||||||||| |||||||||||| ||||||  |||||||||||||||| ||||||||||||  ||||| ||||||| || |||||||    
T  3395698 acatcattttcacttgtgtgattgctctttctgcaacgtgtcg--attcacacaagtgttgtctccccataagttccaatggtgatatcatatccgcttc 3395601  T
Q  105 aacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||||| |||  ||||||||  ||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  3395600 aacatttttggggagcataagtggtttttggtggtggatcgcagacacaaagagtctcatacttaatggagagatgttaatgtgtcaggtgtgagttaaa 3395501  T
Q  205 ataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatc 304  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  3395500 ataacactttgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttaagattttgggtgaagttgtgatgtcaatc 3395401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 168 - 305
Target Start/End: Original strand, 36720068 - 36720205
Alignment:
Q  168 taatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatcta 267  Q
    |||||||||||||||||||||||||||||||||||||||   ||| ||  ||||||| || |||||||| ||||||||||||||||||  |||||| |||    
T  36720068 taatgaagagatgttaatgtgtcaagtgtgagttaaaattctacaatgtgtgcaataatatatgttgagcaacatataagtgagatgatccatataccta 36720167  T
Q  268 atgtcttgagattttgggtgaagttgtgatgtccatct 305  Q
    ||||||  ||| ||||||||||| ||||||||| ||||    
T  36720168 atgtctgaagactttgggtgaagatgtgatgtcaatct 36720205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 29977436 - 29977339
Alignment:
Q  177 gatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    |||||||||||||||||||| ||||||| |  |||||||||||||| ||| |||||||| |||||||||||||| |||||||||||| ||||||||||    
T  29977436 gatgttaatgtgtcaagtgtaagttaaagttccacattgaatgcaagagtggatgttgataaacatataagtgatatgactcatatacctaatgtctt 29977339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 41754198 - 41754117
Alignment:
Q  215 gaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtga 296  Q
    |||||||||||||||||||||||||||||||  ||| ||||||||| |||||||||| || |||||||||||||||||||||    
T  41754198 gaatgcaatagtagatgttgagaaacatatatatgatatgactcatgtatctaatgtattaagattttgggtgaagttgtga 41754117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 19040696 - 19040789
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactca 259  Q
    |||||||| |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  19040696 acttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 19040789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 34425692 - 34425545
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    ||||||||||||||||| |   | ||| ||||| ||||||||||||| ||||| |  ||||||| |||||||| ||||||||||  |||||||||||||     
T  34425692 cagagagtctcatacttgagagaaagaggttaacgtgtcaagtgtgatttaaagttccacattggatgcaataatagatgttgaacaacatataagtgat 34425593  T
Q  252 atgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtc 300  Q
    || |||||||||| ||||| |||||| ||| |||||||| |||| ||||    
T  34425592 ataactcatatat-taatgacttgaggtttagggtgaagatgtggtgtc 34425545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 39839175 - 39839082
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactca 259  Q
    |||||| | |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  39839175 acttaacggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 39839082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 29651760 - 29651860
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||| |||||||| | |||| |||||||||||||||| ||||||||||| |  |||||||||||||| ||||||||||||  ||||| ||||||| |||    
T  29651760 agagtttcatacttgaggaagtgatgttaatgtgtcaaatgtgagttaaagtttcacattgaatgcaagagtagatgttgaacaacatctaagtgatatg 29651859  T
Q  255 a 255  Q
    |    
T  29651860 a 29651860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 179 - 271
Target Start/End: Complemental strand, 36727707 - 36727615
Alignment:
Q  179 tgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgt 271  Q
    |||||||||||||| ||||| |||||||  ||||||  |||||| |||||||||| ||||||||||| ||||||||||| ||||| |||||||    
T  36727707 tgttaatgtgtcaattgtgacttaaaatttcacattagatgcaaaagtagatgttaagaaacatatatgtgagatgactaatatagctaatgt 36727615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 283
Target Start/End: Original strand, 38796791 - 38796902
Alignment:
Q  172 gaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgt 271  Q
    ||||| |||||| |||||||| ||||| |||||||  || |||| ||| || |||| |||||||||||||||||||||| |||||| |||| |||||||     
T  38796791 gaagacatgttagtgtgtcaactgtgacttaaaatttcatattggatgaaagagtatatgttgagaaacatataagtgaaatgactaatatgtctaatgc 38796890  T
Q  272 cttgagattttg 283  Q
    ||| ||||||||    
T  38796891 cttaagattttg 38796902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 41754620 - 41754533
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggct-ccccataagtctcaatgttgatatc 93  Q
    |||||||| ||||| |||||||| |||||| ||||||||||||  ||||||||||| ||||||| ||||||||||| ||||| |||||||    
T  41754620 acatcattatcactcgtgtgattgctctttatgcaatgtgtcg--attcacacaagcgttggctcccccataagtcccaatggtgatatc 41754533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 274
Target Start/End: Complemental strand, 36729363 - 36729254
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    |||| ||| ||| |||||||| |||||||||||||| |||||  ||||||| |||||| ||||||||||||  ||||||||||| ||   || ||||||     
T  36729363 actttatggagatatgttaatttgtcaagtgtgagtaaaaatttcacattgtatgcaagagtagatgttgaacaacatataagttagggaacccatatag 36729264  T
Q  265 ctaatgtctt 274  Q
    ||||||||||    
T  36729263 ctaatgtctt 36729254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 41754081 - 41753978
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagat 279  Q
    |||||||||||| |||| | ||||| | | |||||  ||| || ||||||| ||||| |||||||||||||||||||| ||||||| |||||||| || |    
T  41754081 gttaatgtgtcatgtgtcatttaaacttatacattatatgtaagagtagatattgagcaacatataagtgagatgactaatatatccaatgtcttaaggt 41753982  T
Q  280 tttg 283  Q
    ||||    
T  41753981 tttg 41753978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 24967965 - 24968078
Alignment:
Q  186 gtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttggg 285  Q
    ||||||||||||| ||||| |  ||||||| |||||||| ||||||||||  ||||||||||||| || || ||||||| ||||| ||| || ||| |||    
T  24967965 gtgtcaagtgtgatttaaagttccacattggatgcaataatagatgttgaacaacatataagtgatataacccatatat-taatgacttaaggtttaggg 24968063  T
Q  286 tgaagttgtgatgtc 300  Q
    ||||| |||| ||||    
T  24968064 tgaagatgtggtgtc 24968078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 45053800 - 45053703
Alignment:
Q  177 gatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    |||| ||||||||||  ||||||||||| |  || ||||||||||  |||||| |  ||||||||||||| ||||||||  |||||||||||||||||    
T  45053800 gatgctaatgtgtcatatgtgagttaaagttccatattgaatgcatcagtagacgaagagaaacatataaatgagatgatccatatatctaatgtctt 45053703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 29975957 - 29975885
Alignment:
Q  217 atgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaa 289  Q
    |||||||||||  || ||||||| |||||||  |||||||||||||| |||||||| | ||||||||||||||    
T  29975957 atgcaatagtaagtggtgagaaaaatataagacagatgactcatatacctaatgtcataagattttgggtgaa 29975885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 307
Target Start/End: Original strand, 6465994 - 6466287
Alignment:
Q  7 atcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccc-ataagtctcaatgttgatatcgta-cccgcttc 104  Q
    ||||||||| |||||||| || |||||||| ||||||||||  | |||||  | ||||| |||||| ||||| | ||| | || ||||||| |||| |||    
T  6465994 atcattctcgcttgtgtggtttctctttctacaatgtgtcg--aatcacatcaatgttgactcccctataaggcccaacgatggtatcgtatcccggttc 6466091  T
Q  105 aacatttt-tgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaa 203  Q
    ||||||   ||||  | || |||| ||| |||||||||||| || ||||||||||||||    |||||| ||| ||||||| ||||    ||||| ||||    
T  6466092 aacattgggtggggggagggagtgcttcctggtggtggatcacagacacagagagtctc----ttaatggagaaatgttaacgtgt----tgtgaattaa 6466183  T
Q  204 aataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccat 303  Q
    |||   |||||| |||||| |||| ||||||| |||||| | || ||||| | ||||||| | ||||  ||  ||||||||||||||  |||||||| ||    
T  6466184 aatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccaatgctttaggattttgggtgaagaagtgatgtcgat 6466283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 19994490 - 19994417
Alignment:
Q  190 caagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    |||||||||||||||||  || |||| |||||| |||||||| |||| || |||||||||||||||||| |||||    
T  19994490 caagtgtgagttaaaatttcaaattgtatgcaagagtagatg-tgagcaatatataagtgagatgactcgtatat 19994417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 40599731 - 40599682
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||||||| | |||||||||||||||||| |||||| |||||||    
T  40599731 agagtctcatacttgaggaagagatgttaatgtgttaagtgtaagttaaa 40599682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 45659829 - 45659927
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||||||| |||||  | ||||||||||| ||||||| ||||| | ||| | ||| |||| ||||||  |||||| |||| ||||||||||||||||||    
T  45659829 agagtctcacacttatgggagagatgttaaagtgtcaattgtgactcaaagttacaaattggatgcaa--gtagatcttgaaaaacatataagtgagatg 45659926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 289
Target Start/End: Complemental strand, 29976637 - 29976586
Alignment:
Q  238 aacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaa 289  Q
    |||| ||||||||||||| ||||||| ||| ||||||||||||| |||||||    
T  29976637 aacacataagtgagatgattcatataactagtgtcttgagatttagggtgaa 29976586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 31963777 - 31963646
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgag 277  Q
    ||||||||||||||| || |||||||  | | |||||  ||| || ||||||| ||||| ||||||||||| |||||||  | ||| |||||||||| ||    
T  31963777 atgttaatgtgtcaaatgcgagttaactttatacattagatggaagagtagattttgagcaacatataagtcagatgaccaaaatacctaatgtcttaag 31963678  T
Q  278 attttgggtgaagttgtgatgtccatctcatt 309  Q
     |||   |||||||| || |||| ||||||||    
T  31963677 gtttcatgtgaagttctggtgtcaatctcatt 31963646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 20106738 - 20106660
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgac 256  Q
    ||||||||||||||| ||||||||||  | | |||||| ||| || ||||||| ||||  || ||||||||||||||||    
T  20106738 atgttaatgtgtcaaatgtgagttaacgttatacattggatggaagagtagattttgaataaaatataagtgagatgac 20106660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 39406009 - 39405916
Alignment:
Q  194 tgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtg 287  Q
    ||||||| |||||  ||||||  |||||| ||||||| || ||||||||||||||||  || ||| ||||| |||||| || ||||||| ||||    
T  39406009 tgtgagtaaaaatttcacattttatgcaagagtagatattaagaaacatataagtgaagtgtctcgtatatttaatgtattaagattttcggtg 39405916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 202; Significance: 1e-110; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 5 - 305
Target Start/End: Original strand, 13228533 - 13228830
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    |||||||| |||||||||||||| |||||||||||||| || |  ||||||||||||||||||||||||||||| |||||| ||||||| || |||||||    
T  13228533 acatcattttcacttgtgtgattgctctttctgcaatgcgttg--attcacacaagtgttggctccccataagtttcaatggtgatatcatatccgcttc 13228630  T
Q  105 aacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||||| |||  ||||||||  ||||||||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  13228631 aacatttttggggagcataagtggtttttggtggtggatcgcagacacaaaaagtctcatacttaatggagagatgttaatgtgtcaagtgtgagttaaa 13228730  T
Q  205 ataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatc 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| |||    
T  13228731 ataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaat-tcttaaaattttgggtgaagttgtgatgtcaatc 13228829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 4 - 257
Target Start/End: Complemental strand, 49953272 - 49953018
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccca-taagtctcaatgttgatatcgtacccgct 102  Q
    ||||||||||||||||||||| ||  | |||||||||||| |||  | |||||||||||||| ||||||  |||||| ||| | ||||||| ||  ||||    
T  49953272 gacatcattctcacttgtgtggttgttttttctgcaatgtttcg--aatcacacaagtgttgtctcccccgtaagtcccaacggtgatatcatatacgct 49953175  T
Q  103 tcaacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    |||||||||||||| |||||||||| |||||||||||||||| |  ||||  ||||||||||| |||||  ||||||||||||||||||||||||  |||    
T  49953174 tcaacatttttggggagcggaagtgcttcgtggtggtggatcacggacacgaagagtctcatatttaattgagagatgttaatgtgtcaagtgtggatta 49953075  T
Q  203 aaataacacattgaat-gca-atagtagatgttgagaaacatataagtgagatgact 257  Q
    |||||||||||||||| ||| ||| ||||| ||||  || |||||||||||||||||    
T  49953074 aaataacacattgaatggcatataatagatattgaacaatatataagtgagatgact 49953018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 39974683 - 39974898
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccca-taagtctcaatgttgatatcgtacccgct 102  Q
    |||||||||||||| |||||| ||  | ||||||||||||||||  | |||||||||||||| ||||||  |||||  ||||| ||||||| ||  ||||    
T  39974683 gacatcattctcacctgtgtggttgttttttctgcaatgtgtcg--aatcacacaagtgttgtctcccccgtaagttccaatggtgatatcatatacgct 39974780  T
Q  103 tcaacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    |||||||||||||| || ||||||| ||||||||||||||||||  ||||| ||||| || || |||||  ||||||| |||||||||||||||| ||||    
T  39974781 tcaacatttttggggagtggaagtgcttcgtggtggtggatcgcggacacaaagagtatcgtatttaattgagagatggtaatgtgtcaagtgtgggtta 39974880  T
Q  203 aaataacacattgaatgc 220  Q
    |||||||| |||||||||    
T  39974881 aaataacatattgaatgc 39974898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 309
Target Start/End: Original strand, 281823 - 282059
Alignment:
Q  69 ccccataagtctcaatgttgatatcgtacccgcttcaacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatactt 168  Q
    |||| |||||| ||||| ||||||| ||  |||||||||||||||| | |||||||||| |  |||||||||||||||  ||||  |||||||| || ||    
T  281823 ccccgtaagtcccaatggtgatatcatatacgcttcaacatttttgtggagcggaagtgctgtgtggtggtggatcgcggacacgaagagtctcgtattt 281922  T
Q  169 aatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgc--aatagtagatgttgagaaacatataagtgagatgactcatatatct 266  Q
    |||  |||||||||||||||||||||||| |||||||||||||||||||| |   ||| || || ||||  ||||||| ||||||||||||||      |    
T  281923 aattgagagatgttaatgtgtcaagtgtgggttaaaataacacattgaattccatataatatatattgaacaacatattagtgagatgactca------t 282016  T
Q  267 aatgtcttgagattttgggtgaagttgtgatgtccatctcatt 309  Q
    |||||||||||||||||| || |  ||||||||| ||||||||    
T  282017 aatgtcttgagattttggatgtaactgtgatgtcaatctcatt 282059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 300
Target Start/End: Original strand, 55050004 - 55050168
Alignment:
Q  134 ggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgtt 233  Q
    |||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || ||||||||||    
T  55050004 ggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgtt 55050101  T
Q  234 gagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtc 300  Q
    ||| ||||||||||||  ||||  |||||| ||||| || | || ||| |||||||| |||| ||||    
T  55050102 gagtaacatataagtgttatgatccatatacctaatttcataaggtttggggtgaagatgtgttgtc 55050168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 149 - 263
Target Start/End: Original strand, 6554517 - 6554631
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagt 248  Q
    |||||||||||  || |||| |  ||||||||||||||||||||||||||||||||||   | | || ||| || ||||||| ||||  |||||||||||    
T  6554517 acacagagagttgcaaacttgaataagagatgttaatgtgtcaagtgtgagttaaaattctatagtggatggaagagtagattttgaataacatataagt 6554616  T
Q  249 gagatgactcatata 263  Q
    |||||||||||||||    
T  6554617 gagatgactcatata 6554631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 42729545 - 42729463
Alignment:
Q  179 tgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatata 263  Q
    |||||| ||||||||||  |||||||||   ||| || ||||||||||| |||||||||||||||||||||||||||||||||||    
T  42729545 tgttaacgtgtcaagtg--agttaaaattcaacaatgtatgcaatagtacatgttgagaaacatataagtgagatgactcatata 42729463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 28475752 - 28475656
Alignment:
Q  134 ggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagat 230  Q
    ||||||||||| |  |||| |||||||| | |||||||| |||||||||||||||| |||||| |||||||||  ||||||| |||||| |||||||    
T  28475752 ggtggtggatcacgaacacggagagtctgacacttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagtagat 28475656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 246
Target Start/End: Original strand, 50158172 - 50158268
Alignment:
Q  150 cacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataa 246  Q
    |||||||||| | | |||||||| ||||||||||||||||||||| ||||||||| |  ||||||  |||||| |||| |||||||| |||||||||    
T  50158172 cacagagagtttgacacttaatggagagatgttaatgtgtcaagtatgagttaaagtttcacattttatgcaagagtatatgttgagcaacatataa 50158268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 249
Target Start/End: Complemental strand, 26290128 - 26289997
Alignment:
Q  116 gaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattg 215  Q
    ||||| ||| |||||  ||||||| |||| ||||  ||||||||||| ||||| | | ||| || ||||||||||||||| |||||||| |  |||||||    
T  26290128 gaagcagaattggtttatggtggtagatctcatatgcagagagtctcctactttagggagaaatattaatgtgtcaagtgcgagttaaagt--cacattg 26290031  T
Q  216 aatgcaatagtagatgttgagaaacatataagtg 249  Q
     ||| || ||||||||||||| ||||||||||||    
T  26290030 tatgtaagagtagatgttgagtaacatataagtg 26289997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 50814634 - 50814721
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggct-ccccataagtctcaatgttgatatc 93  Q
    |||||||| ||||| |||||||| |||||| ||||||||||||  ||||||||||| ||||||| ||||||||||| ||||| |||||||    
T  50814634 acatcattatcactcgtgtgattgctctttatgcaatgtgtcg--attcacacaagcgttggctcccccataagtcccaatggtgatatc 50814721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 255
Target Start/End: Original strand, 11559461 - 11559598
Alignment:
Q  118 agcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaa 217  Q
    ||||| |||||||  || ||| ||||| || ||| ||||||||| | ||||| ||||||||||||||| ||| |||||||| |||||||   | |||| |    
T  11559461 agcgggagtggtttttgttggaggatcacaaacatagagagtctgacacttattgaagagatgttaatatgtaaagtgtgacttaaaatttgatattgta 11559560  T
Q  218 tgcaatagtagatgttgagaaacatataagtgagatga 255  Q
    ||||| |||| |||||||  |||||||||||| |||||    
T  11559561 tgcaagagtaaatgttgaacaacatataagtgtgatga 11559598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 13910148 - 13910245
Alignment:
Q  177 gatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    |||||||||||||||  ||||||||||| |  || ||||||||||  |||||| |  ||||||||||||| ||||||||  |||||||||||||||||    
T  13910148 gatgttaatgtgtcatatgtgagttaaagttccatattgaatgcatcagtagacgaagagaaacatataaatgagatgatccatatatctaatgtctt 13910245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 14285276 - 14285369
Alignment:
Q  181 ttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    ||||||||||  |||||||||||| |  || ||||||||||  ||||||||  ||||||||||||||||||||||   ||||||||||||||||    
T  14285276 ttaatgtgtcgtgtgtgagttaaagtttcatattgaatgcatcagtagatgaagagaaacatataagtgagatgatcaatatatctaatgtctt 14285369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 307
Target Start/End: Complemental strand, 42757698 - 42757527
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattg--aatgcaatagtagat 230  Q
    |||||||||||| || |||| |||||||||    |||||  ||||||||||||||||||| ||||||| ||| |   ||||||   |||||| |||||||    
T  42757698 tggtggtggatcacagacacggagagtctc----ttaatagagagatgttaatgtgtcaattgtgagtaaaagtttaacattggatatgcaagagtagat 42757603  T
Q  231 gttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    ||||| |||||||| || ||||| | ||||||| ||||||||||  || ||||||||||   |||||||| ||||||    
T  42757602 gttgaaaaacatatgagggagatta-tcatatacctaatgtcttaggactttgggtgaaaaggtgatgtcgatctca 42757527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 24183510 - 24183432
Alignment:
Q  167 ttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataa 246  Q
    |||||| |||||||||||||||| |||||| |||||||||  ||||||| |||||| |||||||| |||| |||||||||    
T  24183510 ttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagtagatg-tgagcaacatataa 24183432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 154 - 300
Target Start/End: Complemental strand, 17675385 - 17675240
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagat 253  Q
    ||||||||||||||| |   | ||| ||||| ||||||||||||| ||||| |  ||||||| ||||| || ||||||||||  ||||||||||||| ||    
T  17675385 gagagtctcatacttgagagaaagaagttaacgtgtcaagtgtgatttaaagttccacattggatgcattaatagatgttgaacaacatataagtgatat 17675286  T
Q  254 gactcatatatctaatgtcttgagattttgggtgaagttgtgatgtc 300  Q
     || |||||| |||||| ||| || ||| |||||||| |||| ||||    
T  17675285 aacccatata-ctaatgacttaaggtttagggtgaagatgtggtgtc 17675240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 307
Target Start/End: Complemental strand, 42756925 - 42756767
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagt 248  Q
    |||| |||| ||||| |||||| | ||||||||||||||||||  ||||||| ||| |   |||||| |||||| | || || ||||| |||||||||||    
T  42756925 acacggagaatctcacacttaagggagagatgttaatgtgtcatttgtgagtaaaacttctacattggatgcaagactatatattgagcaacatataagt 42756826  T
Q  249 gagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
     | |||||  ||||| |||| ||||| || |||||| ||||| |||| |||| ||||||    
T  42756825 taaatgacaaatatacctaaagtcttaaggttttggatgaagatgtggtgtcaatctca 42756767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 316508 - 316604
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    ||||||||||||||| || |||||||||| | |||||  ||| || ||||||| ||||| ||||||||||| |||||||  | ||| ||||||||||    
T  316508 atgttaatgtgtcaaatgcgagttaaaattatacattagatgaaagagtagattttgagcaacatataagtcagatgaccaaaatacctaatgtctt 316604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 13230882 - 13230986
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    |||| ||||||| |||||| ||||| |||||||  ||| || ||||| |||||||  |||||   || |||||||||||||||||| |||||||| ||||    
T  13230882 cagacagtctcacacttaaggaagatatgttaaaatgttaattgtgatttaaaatttcacataagatacaatagtagatgttgagacacatataaatgag 13230981  T
Q  252 atgac 256  Q
    |||||    
T  13230982 atgac 13230986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 14265690 - 14265626
Alignment:
Q  210 acattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    |||||| ||||||| ||||||| ||||||| ||||||| || || ||||||||||||||||||||    
T  14265690 acattggatgcaattgtagatggtgagaaaaatataagagaaataactcatatatctaatgtctt 14265626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 263
Target Start/End: Original strand, 314299 - 314413
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagt 248  Q
    |||||||||||  || |||| |  ||||||||||||||||||||| ||||||||||||   |   || ||  || ||||||| ||||  |||||||||||    
T  314299 acacagagagttgcaaacttgaataagagatgttaatgtgtcaagcgtgagttaaaattctatggtggatagaagagtagattttgaataacatataagt 314398  T
Q  249 gagatgactcatata 263  Q
    |||||||||||||||    
T  314399 gagatgactcatata 314413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 4237193 - 4237127
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaac 240  Q
    |||||||||||||||  | |||| |||||||||  |||||||||||||| ||| |||||||||||||    
T  4237193 agagatgttaatgtgctacgtgtaagttaaaattccacattgaatgcaagagtggatgttgagaaac 4237127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 6560964 - 6561065
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||||||| | |||| | ||||||| |||||| |||| ||||||||||| |  || |||| || ||| |||||||||| |  |||||||||||||||||    
T  6560964 agagtctcacagttaagggagagatgctaatgtatcaaatgtgagttaaagttccatattggatacaaaagtagatgttaaacaacatataagtgagatg 6561063  T
Q  255 ac 256  Q
    ||    
T  6561064 ac 6561065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 24182575 - 24182446
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgag 277  Q
    |||||||||||||| |||| ||||||| |   |||||||| |||| |||| || |||||||||||  | ||||||||||| |||||  |||||| || ||    
T  24182575 atgttaatgtgtcatgtgtaagttaaacttctacattgaaagcaaaagtatatattgagaaacatgaatgtgagatgactaatatacataatgtattaag 24182476  T
Q  278 attttgggtgaagttgtgatgtccatctca 307  Q
     |||  ||||||| |||| |||| ||||||    
T  24182475 gtttcaggtgaagatgtggtgtcaatctca 24182446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 52543094 - 52543045
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||||||| | |||||||| |||||||||||||||| |||||||    
T  52543094 agagtctcatacttgaggaagagatattaatgtgtcaagtgtaagttaaa 52543045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 13668274 - 13668174
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||||||| |||| |  |||| ||||||||||||||| | ||| ||||| |  ||||||  |||||||||||||||||||||  ||||||  |||||||    
T  13668274 agagtctcaaacttgagaaagatatgttaatgtgtcaattatgatttaaagttccacattacatgcaatagtagatgttgagacccatatagatgagatg 13668175  T
Q  255 a 255  Q
    |    
T  13668174 a 13668174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 13681131 - 13681031
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||||||| |||| |  |||| ||||||||||||||| | ||| ||||| |  ||||||  |||||||||||||||||||||  ||||||  |||||||    
T  13681131 agagtctcaaacttgagaaagatatgttaatgtgtcaattatgatttaaagttccacattacatgcaatagtagatgttgagacccatatagatgagatg 13681032  T
Q  255 a 255  Q
    |    
T  13681031 a 13681031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 48683181 - 48683272
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgag--aaacatataagtgagatgactcatata 263  Q
    ||||||||||||||||||| ||||||||||| |  ||||||||| |||| ||| || ||||||  | ||| | |||||| ||||||||||||    
T  48683181 agagatgttaatgtgtcaaatgtgagttaaagtttcacattgaaagcaagagtggaagttgagcaacacacaaaagtgatatgactcatata 48683272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 22681319 - 22681272
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgag 199  Q
    ||||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  22681319 cagagagtctcgtacttaaggaataaatgttaatgtgtcaagtgtgag 22681272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 253
Target Start/End: Original strand, 36697769 - 36697844
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagat 253  Q
    |||||||||| |||| ||||||||||| |  ||||||| |||||| |||||||||| |  ||||||||||| ||||    
T  36697769 atgttaatgtatcaaatgtgagttaaagttccacattggatgcaaaagtagatgttaaacaacatataagttagat 36697844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 274
Target Start/End: Complemental strand, 42728029 - 42727902
Alignment:
Q  147 atacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataa 246  Q
    ||||||| ||||||||| | ||||   ||| ||||||||||||||| ||| | ||||| |   |||||  |||||| |||||||||| | |||  |||||    
T  42728029 atacacaaagagtctcacaattaagtgagatatgttaatgtgtcaattgttacttaaagttttacatttgatgcaagagtagatgttcataaatgtataa 42727930  T
Q  247 gtgagatgactcatatatctaatgtctt 274  Q
    ||||| ||||| ||||| ||||||||||    
T  42727929 gtgaggtgactaatatacctaatgtctt 42727902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 3773729 - 3773791
Alignment:
Q  209 cacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgt 271  Q
    |||||||| ||||| |||||||| | | ||| ||||| |||| ||||||||||||||||||||    
T  3773729 cacattgactgcaagagtagatggtaacaaaaatataggtgaaatgactcatatatctaatgt 3773791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 240
Target Start/End: Complemental strand, 4280527 - 4280461
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaac 240  Q
    ||||||||||||||| ||  ||| |||||||||  || ||||||||||| ||| |||||||||||||    
T  4280527 agagatgttaatgtgccacatgtaagttaaaattccatattgaatgcaagagtggatgttgagaaac 4280461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 274
Target Start/End: Complemental strand, 27668295 - 27668261
Alignment:
Q  240 catataagtgagatgactcatatatctaatgtctt 274  Q
    |||||||||||||| ||||||||||||||||||||    
T  27668295 catataagtgagataactcatatatctaatgtctt 27668261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 307
Target Start/End: Complemental strand, 35648689 - 35648523
Alignment:
Q  141 gatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaac 240  Q
    ||||||||||| |   ||||||| || ||| | ||||||||| |||| ||| |||||||||||| |   |||||| | ||||||||| || ||||| |||    
T  35648689 gatcgcatacatatgtagtctcacacgtaagggagagatgtttatgtttcatgtgtgagttaaacttctacattgtaagcaatagtatatattgagcaac 35648590  T
Q  241 atataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    ||||||| |||| ||   ||||| |||||| ||| |||||||  || ||| |||| |||| ||||||    
T  35648589 atataagcgagaagaacaatatacctaatgccttaagattttacgtaaagatgtggtgtcaatctca 35648523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 282755 - 282792
Alignment:
Q  237 aaacatataagtgagatgactcatatatctaatgtctt 274  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  282755 aaacatataagtgagatgactaatatatccaatgtctt 282792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 11560199 - 11560299
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    |||||| || |||||| | |||||||||||||||||| | |||||||||| | | |||||| |||||| |||| || ||||  || ||||| ||||||||    
T  11560199 agagtcccacacttaagggagagatgttaatgtgtcatgggtgagttaaacttatacattggatgcaagagtatatattga-caatatatacgtgagatg 11560297  T
Q  255 ac 256  Q
    ||    
T  11560298 ac 11560299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 309
Target Start/End: Original strand, 13909849 - 13909926
Alignment:
Q  232 ttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctcatt 309  Q
    ||||| ||||||||||||||||| |  ||||| || ||||||| ||||||||  ||||| |||| |||| ||||||||    
T  13909849 ttgagcaacatataagtgagatgtccaatatacctgatgtcttaagattttgaatgaagatgtggtgtcaatctcatt 13909926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 259
Target Start/End: Original strand, 35695054 - 35695134
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactca 259  Q
    ||||||||||||||||||||||||| | |  |||| || |||||| |||||||| |||  |||||||||||||  |||||||    
T  35695054 atgttaatgtgtcaagtgtgagttagagttccaca-tggatgcaagagtagatgctgaacaacatataagtgatttgactca 35695134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 270
Target Start/End: Original strand, 55051962 - 55051995
Alignment:
Q  237 aaacatataagtgagatgactcatatatctaatg 270  Q
    |||||||||||||||||||||||||| |||||||    
T  55051962 aaacatataagtgagatgactcatatgtctaatg 55051995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 13919329 - 13919377
Alignment:
Q  156 gagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||| |||||| | |||||||| |||||||||||||||| |||||    
T  13919329 gagtctcaaacttaacggagagatgtcaatgtgtcaagtgtgaattaaa 13919377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 14266310 - 14266234
Alignment:
Q  212 attgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtga 288  Q
    |||| ||| |||||||||  ||||  |||| |||||||||||||| |||||| ||||| |||| |||||| ||||||    
T  14266310 attggatgaaatagtagaatttgaacaacaaataagtgagatgacccatataactaatttcttaagatttagggtga 14266234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 22681229 - 22681165
Alignment:
Q  243 ataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||||||| |||||||||||| |||||||||| || ||| ||||| || |||| |||| ||||||    
T  22681229 ataagtgatatgactcatatacctaatgtcttaaggtttagggtggagatgtggtgtcaatctca 22681165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 28474967 - 28474835
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtc-ttga 276  Q
    ||||| |||||||| |||||||||||| |   |||||||| |||| |||| || |||||| ||||  | |||||||| || |||||  ||||||| || |    
T  28474967 atgttgatgtgtcatgtgtgagttaaacttctacattgaaagcaaaagtatatattgagatacatgaatgtgagatggctaatatacataatgtctttca 28474868  T
Q  277 gattttgggtgaagttgtgatgtccatctcatt 309  Q
    | ||||| |||||| |||| |||| ||||||||    
T  28474867 ggttttgagtgaagatgtggtgtcaatctcatt 28474835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 56340282 - 56340350
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagt 248  Q
    ||||| ||||||||||||| ||||| |  || |||| |||||||| ||||||||||  |||||||||||    
T  56340282 gttaacgtgtcaagtgtgatttaaagttccatattggatgcaataatagatgttgaacaacatataagt 56340350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 296
Target Start/End: Complemental strand, 42797532 - 42797242
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgctt 103  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||  ||||||||||||||| ||||| | |||||||||||| ||||||| || | ||||    
T  42797532 gacatcattatcactcgtgtgattgctctttctgcaatgtgtcg--attcacacaagtgtttgctcctcgtaagtctcaatggtgatatcatatctgctt 42797435  T
Q  104 caacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaa 203  Q
    ||||||||||||| ||||||||||||  |||||||||||| ||| | |||||||||||||| ||||||  | ||||||||||||||||||||||||||||    
T  42797434 caacatttttggggagcggaagtggtctgtggtggtggatagcagatacagagagtctcatgcttaatagaaagatgttaatgtgtcaagtgtgagttaa 42797335  T
Q  204 aataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtga 296  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  42797334 aataacacattgaatgcaatagtatatgttgagaaacatataagtgagatgactcatgtatctaatgtcttaagattttgggtgaagttgtga 42797242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 5 - 296
Target Start/End: Complemental strand, 23142042 - 23141752
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccc-ataagtctcaatgttgatatcgtacccgctt 103  Q
    |||||||| ||||| |||||||| |||||| ||||||||||||  ||||||||||| ||||||||||| ||||||||||||| ||||||| || | ||||    
T  23142042 acatcattatcactcgtgtgattgctctttatgcaatgtgtcg--attcacacaagcgttggctcccccataagtctcaatggtgatatcatatctgctt 23141945  T
Q  104 caacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaa 203  Q
    ||||||||| ||| |||||||||||| ||||||||||||| ||| | |||||||||||||| ||||||  ||||||||||| ||||||||| ||||||||    
T  23141944 caacattttcggggagcggaagtggtccgtggtggtggatagcagatacagagagtctcatgcttaatagagagatgttaacgtgtcaagtatgagttaa 23141845  T
Q  204 aataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtga 296  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  23141844 aataacacattgaatgcaatagtagatgttgagaaacatataaatgagatgactcatgtatctaatgtcttaagattttgggtgaagttgtga 23141752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 5 - 296
Target Start/End: Original strand, 13756376 - 13756666
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccc-cataagtctcaatgttgatatcgtacccgctt 103  Q
    |||||||| |||||||||||||| |||||||||||||||||||  ||||||||||| ||||||| || |||||||| ||||| ||||||| || | ||||    
T  13756376 acatcattatcacttgtgtgattgctctttctgcaatgtgtcg--attcacacaagcgttggcttccacataagtcccaatggtgatatcatatctgctt 13756473  T
Q  104 caacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaa 203  Q
    ||||||||||||| |||||||||||| ||||||||||||| | | | ||| |||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  13756474 caacatttttggggagcggaagtggtccgtggtggtggatagtagatacaaagagtctcatgcttaatatagatatgttaatgtgtcaagtgtgagttaa 13756573  T
Q  204 aataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtga 296  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  13756574 aataacacattgaatgcaatagtagatgttgagaaacatttaagtgaaatgactcatgtatctaatgtcttaagattttgggtgaagttgtga 13756666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 148 - 305
Target Start/End: Complemental strand, 10901547 - 10901390
Alignment:
Q  148 tacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataag 247  Q
    ||||| ||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  10901547 tacacggagagtctcgtacttaatggagagatgttaatgtatcaaatgtgagttaaaataacacattgaatgcaatagtagatgttgagtaacatacaag 10901448  T
Q  248 tgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatct 305  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||||||||| ||||    
T  10901447 tgagatgactcgtatatctaatgtgttaagattttgggtgaagttgtgatgtcaatct 10901390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 4 - 261
Target Start/End: Complemental strand, 21589082 - 21588824
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccca-taagtctcaatgttgatatcgtacccgct 102  Q
    |||||||||||||| |||||| ||  | ||||||||||||||||  | |||||||||||||| ||||||  |||||  ||||| ||||||| ||  ||||    
T  21589082 gacatcattctcacctgtgtggttgttttttctgcaatgtgtcg--aatcacacaagtgttgtctcccccgtaagttccaatggtgatatcatatacgct 21588985  T
Q  103 tcaacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    |||||| || |||| |||| ||||| |||||||||||||||||   ||||  ||||| || || |||||  ||||||| |||||||||||| ||| ||||    
T  21588984 tcaacaattatggggagcgaaagtgcttcgtggtggtggatcgtggacacgaagagtatcgtatttaattgagagatggtaatgtgtcaagggtgggtta 21588885  T
Q  203 aaataacacattgaatg-ca-atagtagatgttgagaaacatataagtgagatgactcata 261  Q
    ||||||||||||||||| || ||| ||||| ||||  ||||||| ||||||||||||||||    
T  21588884 aaataacacattgaatgtcatataatagatattgaataacatatcagtgagatgactcata 21588824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 295
Target Start/End: Complemental strand, 16313379 - 16313202
Alignment:
Q  116 gaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattg 215  Q
    ||||| ||| |||||  ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  |||||||    
T  16313379 gaagcagaattggtttatggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattg 16313282  T
Q  216 aatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtg 295  Q
     ||| || ||||||||||||| ||||||||||||  ||||  |||||| ||||| || | || ||| |||||||| ||||    
T  16313281 gatgtaagagtagatgttgagtaacatataagtgttatgatccatatacctaatttcataaggtttggggtgaagatgtg 16313202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 305
Target Start/End: Original strand, 30254504 - 30254663
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatat-aag 247  Q
    |||| ||||||||||||||||| | | ||||||||||||||||| |||||||||||||   ||| |  ||||||  ||| |||||||  ||||||| |||    
T  30254504 acacggagagtctcatacttaacggaaagatgttaatgtgtcaaatgtgagttaaaattcgacaatagatgcaaacgtatatgttgaacaacatataaag 30254603  T
Q  248 tgag--atgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatct 305  Q
    ||||  | |||||||||| ||||||||   ||| ||||||||||| ||||||||||||||    
T  30254604 tgagacacgactcatatacctaatgtcaaaagactttgggtgaagatgtgatgtccatct 30254663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 295
Target Start/End: Original strand, 34800772 - 34800949
Alignment:
Q  116 gaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattg 215  Q
    ||||| ||| |||||  ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  |||||||    
T  34800772 gaagcagaattggtttatggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattg 34800869  T
Q  216 aatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtg 295  Q
     ||| || ||||||||||||| ||||||||||||  ||||  |||||| ||||| || | || ||| |||||||| ||||    
T  34800870 gatgtaagagtagatgttgagtaacatataagtgttatgatccatatacctaatttcataaggtttggggtgaagatgtg 34800949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 118 - 290
Target Start/End: Original strand, 38290486 - 38290658
Alignment:
Q  118 agcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaa 217  Q
    ||||| ||||| || |||| ||||||| ||| || ||||||||||| | || |  |||||||||||||||||||||||||||||| |||   |||||  |    
T  38290486 agcgggagtggctcatggtagtggatcacatgcatagagagtctcacaattgaaaaagagatgttaatgtgtcaagtgtgagttataattttacattaca 38290585  T
Q  218 tgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaag 290  Q
    ||||| || | ||||| | ||||||||||||| | ||||| ||||| |||||| ||| ||| ||| |||||||    
T  38290586 tgcaagagaaaatgtttaaaaacatataagtgggttgactgatatacctaatgccttaagacttttggtgaag 38290658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 152 - 284
Target Start/End: Original strand, 45247765 - 45247897
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    |||||||||||| |||||| | |||||| ||||| |||||||||||||||||| |   || |||||||||| ||||  ||||||  || |||||| ||||    
T  45247765 cagagagtctcacacttaagggagagattttaatatgtcaagtgtgagttaaagttctacgttgaatgcaaaagtatgtgttgaacaaaatataaatgag 45247864  T
Q  252 atgactcatatatctaatgtcttgagattttgg 284  Q
    ||||||||||||||| ||| ||| || ||||||    
T  45247865 atgactcatatatctgatgacttaaggttttgg 45247897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 152 - 286
Target Start/End: Original strand, 23686598 - 23686732
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    |||||||| ||| |||||| | |||||||||||| |||||||||||||||||| |   |  |||||||||| |||| |||||||  || |||||| ||||    
T  23686598 cagagagtatcacacttaagggagagatgttaatatgtcaagtgtgagttaaagttctaacttgaatgcaaaagtatatgttgaacaaaatataaatgag 23686697  T
Q  252 atgactcatatatctaatgtcttgagattttgggt 286  Q
    |||||| |||||||| ||| ||| || ||||||||    
T  23686698 atgactgatatatctgatgacttaaggttttgggt 23686732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 248
Target Start/End: Complemental strand, 16250169 - 16250039
Alignment:
Q  116 gaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattg 215  Q
    ||||| ||| |||||  ||||||| |||| ||||  |||||| |||| ||||| | ||||| |||||||||||||||||| ||| |||| |  |||||||    
T  16250169 gaagcagaattggtttatggtggtagatctcatatgcagagaatctcgtacttgaggaagaaatgttaatgtgtcaagtgcgagataaagt--cacattg 16250072  T
Q  216 aatgcaatagtagatgttgagaaacatataagt 248  Q
     ||| || ||||||||||||| |||||||||||    
T  16250071 gatgtaagagtagatgttgagtaacatataagt 16250039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 249
Target Start/End: Complemental strand, 37251278 - 37251164
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || ||||||| |    
T  37251278 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatat 37251181  T
Q  233 tgagaaacatataagtg 249  Q
    |||| ||||||||||||    
T  37251180 tgagtaacatataagtg 37251164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 40885741 - 40885853
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    ||||||||||||||||| |   | ||| |||||  |||||||||||| |||||||  ||||||| |||||||| || |||||||  |||||||||||||     
T  40885741 cagagagtctcatacttgagagaaagaggttaacatgtcaagtgtgatttaaaatttcacattggatgcaataataaatgttgaacaacatataagtgat 40885840  T
Q  252 atgactcatatat 264  Q
    || ||||||||||    
T  40885841 ataactcatatat 40885853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 264
Target Start/End: Original strand, 23683105 - 23683216
Alignment:
Q  153 agagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgaga 252  Q
    |||||||||||||||| |   | ||| || |||||||||||||| | ||||| |  ||||||| ||||||||||| |||||||  || |||||||||| |    
T  23683105 agagagtctcatacttgagataaagaggtcaatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgata 23683204  T
Q  253 tgactcatatat 264  Q
    ||||||||||||    
T  23683205 tgactcatatat 23683216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 309
Target Start/End: Original strand, 13758881 - 13759030
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||||||||| ||||   |||||||||||||| |||||||||||||||  ||     ||| |||||| ||||| |||| |  ||||||| |||||||||    
T  13758881 agagtctcatagttaaaagagagatgttaatgtatcaagtgtgagttaaccta-----ttggatgcaagagtagttgttaaacaacatattagtgagatg 13758975  T
Q  255 actcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctcatt 309  Q
    || | |||| |||||||||| || |||||||| ||  |||| |||| ||||||||    
T  13758976 acccgtatacctaatgtcttaaggttttgggtcaaaatgtggtgtcaatctcatt 13759030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 41527140 - 41527026
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagt 248  Q
    |||||||||||  || |||| |  ||||||| ||||||||||||||||||||||||||   | | || ||  || ||||||| ||||  |||||||||||    
T  41527140 acacagagagttgcaaacttgaataagagatattaatgtgtcaagtgtgagttaaaattctatagtggatagaagagtagattttgaataacatataagt 41527041  T
Q  249 gagatgactcatata 263  Q
    |||||||||||||||    
T  41527040 gagatgactcatata 41527026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 40260477 - 40260529
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||||||||||||| | ||||||||||||||||||||||| | |||||||    
T  40260477 cagagagtctcatacttgaggaagagatgttaatgtgtcaagtataagttaaa 40260529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 23141716 - 23141613
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagat 279  Q
    |||||||||||| |||| | ||||| | | |||||  ||| || ||||||| ||||| |||||| ||||||||||||| ||||||| |||||||| || |    
T  23141716 gttaatgtgtcatgtgtcatttaaacttatacattatatgtaagagtagatattgagcaacatacaagtgagatgactaatatatccaatgtcttaaggt 23141617  T
Q  280 tttg 283  Q
    ||||    
T  23141616 tttg 23141613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 26622938 - 26622847
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaa-taacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaa 268  Q
    ||||| ||||||||||||||||||| || |   ||||| |||  |||||||| ||||||  ||||||||||||||||||||| |||||||||    
T  26622938 atgttgatgtgtcaagtgtgagttataagtctaacattaaataaaatagtaggtgttgaacaacatataagtgagatgactcgtatatctaa 26622847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 283
Target Start/End: Complemental strand, 42797206 - 42797103
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagat 279  Q
    |||||||||||| |||| | ||||| | | |||||  ||| || ||||||| ||||| |||||||||||||||||||| |||| || |||||||| || |    
T  42797206 gttaatgtgtcacgtgtcatttaaagttatacattatatgtaagagtagatattgagcaacatataagtgagatgactaatatttccaatgtcttaaggt 42797107  T
Q  280 tttg 283  Q
    ||||    
T  42797106 tttg 42797103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 271
Target Start/End: Original strand, 14376132 - 14376250
Alignment:
Q  153 agagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgaga 252  Q
    |||||||||||||||||||||||| ||||||||||   || || || ||||| |  ||||||  | ||||||||| ||||| ||||| || || ||||||    
T  14376132 agagagtctcatacttaatgaagatatgttaatgtactaattgcgacttaaagttccacattagaagcaatagtaaatgttaagaaatatttacgtgaga 14376231  T
Q  253 tgactcatatatctaatgt 271  Q
    |||   |||||||||||||    
T  14376232 tgatcaatatatctaatgt 14376250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 17888052 - 17888130
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgac 256  Q
    ||||||||||||||| |||||||||| || | ||| || ||| || ||||||| ||||  |||||||||||||||||||    
T  17888052 atgttaatgtgtcaaatgtgagttaacattatacactggatggaagagtagattttgaacaacatataagtgagatgac 17888130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 290
Target Start/End: Original strand, 45528252 - 45528310
Alignment:
Q  232 ttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaag 290  Q
    ||||| ||||||||| |||||||||  ||||| |||||||||| |||||||||||||||    
T  45528252 ttgagcaacatataaatgagatgacaaatatacctaatgtcttaagattttgggtgaag 45528310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 15276895 - 15276766
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgag 277  Q
    |||||||||||||| |||| ||||||| |   |||||| | |||| |||| || |||||||||||  | ||||||||||| |||||  |||||| || ||    
T  15276895 atgttaatgtgtcatgtgtaagttaaacttctacattggaagcaaaagtatatattgagaaacatgaatgtgagatgactaatatacataatgtattaag 15276796  T
Q  278 attttgggtgaagttgtgatgtccatctca 307  Q
     |||| ||||||| |||| |||| ||||||    
T  15276795 gttttaggtgaagatgtggtgtcaatctca 15276766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 15457264 - 15457135
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgag 277  Q
    |||||||||||||| |||| ||||||| |   |||||| | |||| |||| || |||||||||||  | ||||||||||| |||||  |||||| || ||    
T  15457264 atgttaatgtgtcatgtgtaagttaaacttctacattggaagcaaaagtatatattgagaaacatgaatgtgagatgactaatatacataatgtattaag 15457165  T
Q  278 attttgggtgaagttgtgatgtccatctca 307  Q
     |||| ||||||| |||| |||| ||||||    
T  15457164 gttttaggtgaagatgtggtgtcaatctca 15457135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 274
Target Start/End: Original strand, 24482019 - 24482052
Alignment:
Q  241 atataagtgagatgactcatatatctaatgtctt 274  Q
    ||||||||||||||||||||||||||||||||||    
T  24482019 atataagtgagatgactcatatatctaatgtctt 24482052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 8357749 - 8357693
Alignment:
Q  150 cacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaat 206  Q
    |||| ||||||||| ||||||||  || |||| ||||||||||||||||||||||||    
T  8357749 cacaaagagtctcaaacttaatgttgaaatgtcaatgtgtcaagtgtgagttaaaat 8357693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 15274955 - 15274859
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    ||||||||||||||  ||||||||||| |  || ||||||| ||  | ||||||  ||||||| |||||||||||||| | |||||||||| |||||    
T  15274955 atgttaatgtgtcatatgtgagttaaagtttcatattgaattcatcaatagatgaagagaaacgtataagtgagatgattaatatatctaacgtctt 15274859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 15455324 - 15455228
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    ||||||||||||||  ||||||||||| |  || ||||||| ||  | ||||||  ||||||| |||||||||||||| | |||||||||| |||||    
T  15455324 atgttaatgtgtcatatgtgagttaaagtttcatattgaattcatcaatagatgaagagaaacgtataagtgagatgattaatatatctaacgtctt 15455228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 274
Target Start/End: Complemental strand, 16220354 - 16220254
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtct 273  Q
    ||||||||||||||  || |||| ||||||||| | | |||||||| ||||||| || ||||  || ||||||||| || |||| ||| |||||||||||    
T  16220354 agagatgttaatgtaccatgtgtaagttaaaattataaattgaatgaaatagtatatattgaacaaaatataagtgggaagactaatacatctaatgtct 16220255  T
Q  274 t 274  Q
    |    
T  16220254 t 16220254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 357546 - 357601
Alignment:
Q  209 cacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    ||||||| ||||||||||| |||||||  || |||||||||| |||||||||||||    
T  357546 cacattggatgcaatagtaaatgttgaacaatatataagtgatatgactcatatat 357601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 13758078 - 13758121
Alignment:
Q  221 aatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    |||||||||||||||  |||||||| ||||||||||||||||||    
T  13758078 aatagtagatgttgaataacatatacgtgagatgactcatatat 13758121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 300
Target Start/End: Complemental strand, 16221656 - 16221541
Alignment:
Q  185 tgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgg 284  Q
    |||||||||||| ||| |||||  ||| ||| ||| ||||||  ||||| ||||||||||||||||  | || |||||||||||||| || ||| ||  |    
T  16221656 tgtgtcaagtgttagtaaaaatttcactttgtatgaaatagtttatgttaagaaacatataagtgaagtaacacatatatctaatgttttaagacttcag 16221557  T
Q  285 gtgaagttgtgatgtc 300  Q
    | |||| |||||||||    
T  16221556 gagaagatgtgatgtc 16221541  T

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Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 17871244 - 17871311
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataag 247  Q
    ||||||||||||||||||||||||| |   |||||||||| || |||| || ||||| ||||||||||    
T  17871244 gttaatgtgtcaagtgtgagttaaagttttacattgaatgtaagagtaaatattgagcaacatataag 17871311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 18953425 - 18953362
Alignment:
Q  179 tgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacat 242  Q
    |||||||||||||| ||||| |||||||   |||||| |||||| |||||||||||| ||||||    
T  18953425 tgttaatgtgtcaactgtgaattaaaatttgacattggatgcaagagtagatgttgaaaaacat 18953362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 23525197 - 23525268
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| ||||||||    
T  23525197 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaa 23525268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 10279043 - 10279185
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagat 253  Q
    |||||||||| ||||||   | |||||||||| | |||  |||||||| || |  |||||| ||| ||| |||||||| |||||||  ||||||||||||    
T  10279043 gagagtctcacacttaagagatagatgttaatatatcatatgtgagttgaagtttcacattcaattcaagagtagatggtgagaaaattataagtgagat 10279142  T
Q  254 gactcatatatctaatgtcttgagattttgggtgaagttgtga 296  Q
    ||  |||||| |||||||  | || |||||||| ||| |||||    
T  10279143 gatccatatacctaatgttgtaaggttttgggttaagatgtga 10279185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 204
Target Start/End: Complemental strand, 35226758 - 35226668
Alignment:
Q  114 gggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||| | |||||||| || |||| |||| ||||  || |||||||||||||||| ||||| |||||| | |||||||| | |||||||    
T  35226758 gggaagctggagtggttcatgatggtagatcacatatgcaaagagtctcatacttaaggaagaaatgttagtatgtcaagtattagttaaa 35226668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 758098 - 758151
Alignment:
Q  168 taatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgca 221  Q
    ||||| ||| || |||||||||||||||| |||||||||  |||||||||||||    
T  758098 taatggagatattttaatgtgtcaagtgtaagttaaaattccacattgaatgca 758151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 5685867 - 5685916
Alignment:
Q  153 agagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    ||||| ||||| |||||| | |||||||||||||||||| ||||||||||    
T  5685867 agagaatctcacacttaaaggagagatgttaatgtgtcatgtgtgagtta 5685916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 274
Target Start/End: Complemental strand, 21588088 - 21588051
Alignment:
Q  237 aaacatataagtgagatgactcatatatctaatgtctt 274  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  21588088 aaacatataagtgagatgactaatatatccaatgtctt 21588051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 270
Target Start/End: Original strand, 34803420 - 34803453
Alignment:
Q  237 aaacatataagtgagatgactcatatatctaatg 270  Q
    |||||||||||||||||||||||||| |||||||    
T  34803420 aaacatataagtgagatgactcatatgtctaatg 34803453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 15342402 - 15342286
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||| ||| |||| || ||||||| ||||||| | |||||||||||||| | | | |||| ||| || | || || ||||  |||||||||||||||||    
T  15342402 agagtttcacacttgattaagagatattaatgtattaagtgtgagttaaagttatatattggatggaagattacattttgaacaacatataagtgagatg 15342303  T
Q  255 actcatatatctaatgt 271  Q
    || | |||| |||||||    
T  15342302 acccgtatacctaatgt 15342286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 15431467 - 15431351
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||| ||| |||| || ||||||| ||||||| | |||||||||||||| | | | |||| ||| || | || || ||||  |||||||||||||||||    
T  15431467 agagtttcacacttgattaagagatattaatgtattaagtgtgagttaaagttatatattggatggaagattacattttgaacaacatataagtgagatg 15431368  T
Q  255 actcatatatctaatgt 271  Q
    || | |||| |||||||    
T  15431367 acccgtatacctaatgt 15431351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 15522771 - 15522655
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||| ||| |||| || ||||||| ||||||| | |||||||||||||| | | | |||| ||| || | || || ||||  |||||||||||||||||    
T  15522771 agagtttcacacttgattaagagatattaatgtattaagtgtgagttaaagttatatattggatggaagattacattttgaacaacatataagtgagatg 15522672  T
Q  255 actcatatatctaatgt 271  Q
    || | |||| |||||||    
T  15522671 acccgtatacctaatgt 15522655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 5 - 307
Target Start/End: Complemental strand, 38016177 - 38015878
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    |||||||| | |||||||||||| ||||||||||||| | |||  ||||||||||||| |||||||||||||||| |||||  |||||| || |||||||    
T  38016177 acatcattattacttgtgtgattgctctttctgcaatatatcg--attcacacaagtgctggctccccataagtcccaatggcgatatcatatccgcttc 38016080  T
Q  105 aacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||||| | | ||||||||||||||||||||||||||   ||||| | |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  38016079 aacatttttgtggaacggaagtggttcgtggtggtggatcgtggacacaaa-agtctcatacttgatggagagatgttaatgtgtcaagtgtgagttaaa 38015981  T
Q  205 ataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatc 304  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||    
T  38015980 ataacacattgaatgcaatagtagatgttgagcaacatataagtgagatgactcatatatctaatgacttaagattttgggtgaagttgtgatgtcaatc 38015881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 256
Target Start/End: Complemental strand, 9012812 - 9012711
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||||||| |||||||| ||| || |||||||||||||||| |||||||||  |||| ||||| ||| ||||||||||||| |||||||||||||| ||    
T  9012812 agagtctcacacttaatggagacatattaatgtgtcaagtgttagttaaaatttcacaatgaattcaagagtagatgttgagcaacatataagtgagctg 9012713  T
Q  255 ac 256  Q
    ||    
T  9012712 ac 9012711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 33014122 - 33014000
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccca-taagtctcaatgttgatatcgtacccgct 102  Q
    ||||||||||||||||||||| ||  | ||||||||||||||||  | |||||||||||||| |||||   |||||| ||||| ||||||| ||  ||||    
T  33014122 gacatcattctcacttgtgtggttgttttttctgcaatgtgtcg--aatcacacaagtgttgtctcccatgtaagtcccaatggtgatatcatatacgct 33014025  T
Q  103 tcaacatttttgggaagcggaagtg 127  Q
    |||||||||||||| ||||||||||    
T  33014024 tcaacatttttggggagcggaagtg 33014000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 295
Target Start/End: Complemental strand, 29866004 - 29865827
Alignment:
Q  116 gaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattg 215  Q
    ||||| ||| |||||  ||||||| |||| ||||  ||||||||||| ||| | | ||||| |||||||||||||||||| |||||||| |  |||||||    
T  29866004 gaagcagaattggtttatggtggtagatctcatatgcagagagtctcgtacatgaggaagaaatgttaatgtgtcaagtgcgagttaaagt--cacattg 29865907  T
Q  216 aatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtg 295  Q
     ||| || ||| ||||||||| ||||||||||||  |||| ||||||| ||||| || | || ||| |||||||| ||||    
T  29865906 gatgtaagagttgatgttgagtaacatataagtgttatgattcatatacctaatttcataaggtttggggtgaagatgtg 29865827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 116 - 249
Target Start/End: Complemental strand, 8128563 - 8128432
Alignment:
Q  116 gaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattg 215  Q
    ||||| ||| |||||  ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  |||||||    
T  8128563 gaagcagaattggtttatggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattg 8128466  T
Q  216 aatgcaatagtagatgttgagaaacatataagtg 249  Q
     ||| || ||||||||||||| ||||||||||||    
T  8128465 gatgtaagagtagatgttgagtaacatataagtg 8128432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 263
Target Start/End: Original strand, 9024952 - 9025042
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatata 263  Q
    |||||||||||||||||||||||||||||||||| | | | || ||  || ||||||| ||||  ||||||||||||||||||||||||||    
T  9024952 aagagatgttaatgtgtcaagtgtgagttaaaattatatagtggatagaagagtagattttgaataacatataagtgagatgactcatata 9025042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 176 - 270
Target Start/End: Original strand, 20966121 - 20966215
Alignment:
Q  176 agatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatg 270  Q
    ||||||||||||||||||||||| ||||| |  ||||||| |||||||| ||||||||||   |||||||| | | |||||||||||||||||||    
T  20966121 agatgttaatgtgtcaagtgtgatttaaagttccacattggatgcaataatagatgttgaacgacatataaattatatgactcatatatctaatg 20966215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 300
Target Start/End: Original strand, 4062136 - 4062282
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || ||||||||||||| ||||||||||||      
T  4062136 cagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgttgagtaacatataagtgtt 4062233  T
Q  252 atgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtc 300  Q
    ||||  |||||| ||||| || | || ||| |||||||| |||| ||||    
T  4062234 atgatccatatacctaatttcataaggtttggggtgaagatgtgttgtc 4062282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 10175893 - 10176006
Alignment:
Q  186 gtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttggg 285  Q
    |||||||||||||| ||||||  ||| | | |||||| | || |||||||| |||| ||||||| |||||| ||||||||||||||||| ||| ||||||    
T  10175893 gtgtcaagtgtgagctaaaatttcacgt-gtatgcaagattatatgttgagtaacacataagtgtgatgacccatatatctaatgtcttaagactttggg 10175991  T
Q  286 tgaagttgtgatgtc 300  Q
    ||||| | |||||||    
T  10175992 tgaagatatgatgtc 10176006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 281
Target Start/End: Complemental strand, 25545793 - 25545697
Alignment:
Q  185 tgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattt 281  Q
    |||||||||||||||| |||||  ||||||  ||| || ||||||| |||||||||||||||||||  ||||   ||||||||||||||| ||||||    
T  25545793 tgtgtcaagtgtgagtaaaaatttcacattctatgtaagagtagatattgagaaacatataagtgatgtgacctgtatatctaatgtcttaagattt 25545697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 264
Target Start/End: Complemental strand, 27594641 - 27594557
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    ||||| ||||||||||||| ||||| |  |||||||||||||||| ||||||||||  ||||||||||||| || || |||||||    
T  27594641 gttaacgtgtcaagtgtgatttaaagttccacattgaatgcaataatagatgttgaacaacatataagtgatataacccatatat 27594557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 300
Target Start/End: Complemental strand, 7333030 - 7332884
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    |||||||| || ||||| | | ||| |||||||||||||||||| ||||| ||||  ||||||| ||| || ||||||| ||||| ||||||||||||      
T  7333030 cagagagtttcgtacttgagggagaaatgttaatgtgtcaagtgcgagttcaaat--cacattggatgtaagagtagatattgagtaacatataagtgtt 7332933  T
Q  252 atgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtc 300  Q
    | ||| |||||| ||||| || | || ||| |||||||| |||| ||||    
T  7332932 acgacccatatacctaatttcataaggtttggggtgaagatgtgttgtc 7332884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 33013981 - 33013892
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaa-tgca-atagtagatgttgagaaacatataagtgagatgactcata 261  Q
    ||||||| |||||||||||||||| ||||||||||||||||||| | || ||| || || ||||  ||||||| ||||||||||||||||    
T  33013981 agagatgctaatgtgtcaagtgtgggttaaaataacacattgaatttcatataatatatattgaacaacatattagtgagatgactcata 33013892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 19319006 - 19318893
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||||||| |||||||  |||||||||| |||||||  | ||||||||| |  |||||||||||||  |||||||  ||||| | ||||||||||||||    
T  19319006 agagtctcacacttaat--agagatgttattgtgtcatatatgagttaaatttccacattgaatgcacgagtagatagtgagataaatataagtgagatg 19318909  T
Q  255 actcatatatctaatg 270  Q
    || |||| | ||||||    
T  19318908 acacatacacctaatg 19318893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 19910682 - 19910558
Alignment:
Q  176 agatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttg 275  Q
    ||||||||||| | ||| |||| || |||||  ||||||| |||||| ||||||| ||||  |||||||||||||||||| |||||||  ||||  |||     
T  19910682 agatgttaatgcgacaaatgtgtgtcaaaattccacattgtatgcaagagtagatattgaacaacatataagtgagatgagtcatatacttaatacctta 19910583  T
Q  276 agattttgggtgaagttgtgatgtc 300  Q
    ||| ||| | ||||| |||||||||    
T  19910582 agactttagatgaagatgtgatgtc 19910558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 42954500 - 42954441
Alignment:
Q  238 aacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgat 297  Q
    ||||||||| |||||| ||||||||| ||||||||||||| ||||||  |||| ||||||    
T  42954500 aacatataaatgagataactcatatacctaatgtcttgaggttttggtcgaagatgtgat 42954441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 11770465 - 11770399
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgc 220  Q
    ||||||||||||||||| | ||||| ||||||||||| | ||||| ||||| | |||||||| ||||    
T  11770465 gagagtctcatacttaagggagagaagttaatgtgtcgaatgtgatttaaagttacacattggatgc 11770399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 270
Target Start/End: Original strand, 4064070 - 4064103
Alignment:
Q  237 aaacatataagtgagatgactcatatatctaatg 270  Q
    |||||||||||||||||||||||||| |||||||    
T  4064070 aaacatataagtgagatgactcatatgtctaatg 4064103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 270
Target Start/End: Complemental strand, 29863406 - 29863373
Alignment:
Q  237 aaacatataagtgagatgactcatatatctaatg 270  Q
    |||||||||||||||||||||||||| |||||||    
T  29863406 aaacatataagtgagatgactcatatgtctaatg 29863373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 33009903 - 33009855
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||||| ||||||  ||||||||||||||||||| ||||||||||||    
T  33009903 agagtctcacacttaaa-aagagatgttaatgtgtcatgtgtgagttaaa 33009855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 36567302 - 36567241
Alignment:
Q  229 atgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaag 290  Q
    ||||||||  |||| |||||||||||| || ||||||||||||||  ||||||| |||||||    
T  36567302 atgttgagtgacatgtaagtgagatgagtcgtatatctaatgtctgaagattttcggtgaag 36567241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 2260887 - 2260855
Alignment:
Q  172 gaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||| ||||||||||||||||||||||||||||    
T  2260887 gaagtgatgttaatgtgtcaagtgtgagttaaa 2260855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 3e-91; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 43387344 - 43387047
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttc 104  Q
    |||| ||| |||||||||||||| || ||||| || ||||||   ||||||||||||||||| |||||||||||| ||||| ||||||| || ||| |||    
T  43387344 acattattttcacttgtgtgattgctttttctacattgtgtca--attcacacaagtgttggatccccataagtcccaatggtgatatcatatccgtttc 43387247  T
Q  105 aacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||||| || |||  ||||||||||||||| ||||||||| |||| ||||||||| |||||||   |||||||||||||||||||||||||||||||    
T  43387246 aacattttttgggagcaaaagtggttcgtggtg-tggatcgcagacacggagagtctcgtacttaacagagagatgttaatgtgtcaagtgtgagttaaa 43387148  T
Q  205 ataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatc 304  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| |||    
T  43387147 attacacattgaatgcaatagtagatgttgagaaacatataagtgaaatgactcgtatatctaatgtcttaagattttgggtgaagttgtgatgtcaatc 43387048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 124 - 261
Target Start/End: Complemental strand, 22636447 - 22636310
Alignment:
Q  124 agtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaat 223  Q
    |||||||| |||| ||||||| || ||| ||||||||| |||||||||| |||||||||||| | ||||||||||||||||||   || ||||||||||     
T  22636447 agtggttcttggttgtggatcccaaacatagagagtcttatacttaatggagagatgttaatttttcaagtgtgagttaaaatttgactttgaatgcaag 22636348  T
Q  224 agtagatgttgagaaacatataagtgagatgactcata 261  Q
    |||||||||||||  ||||||||| ||| |||||||||    
T  22636347 agtagatgttgagctacatataagggaggtgactcata 22636310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 20306820 - 20306723
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatata 263  Q
    |||||||| |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||  |||||||||| ||||||||||||||||||||    
T  20306820 acttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactcatata 20306723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 40946518 - 40946611
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactca 259  Q
    |||||||| |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  40946518 acttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 40946611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 1992421 - 1992514
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactca 259  Q
    |||||||| |||||||||||||||||||||||||||||||||   | |||| |||||||||||| |  |||||||||| ||||||||||||||||    
T  1992421 acttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtag-ttatgagaaacatttaagtgagatgactca 1992514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 30001829 - 30001736
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactca 259  Q
    |||||||| ||||||||||||||||||||||| |||||||||   | |||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  30001829 acttaatggagagatgttaatgtgtcaagtgtaagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 30001736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 290
Target Start/End: Original strand, 47783134 - 47783270
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagat 253  Q
    ||||||||| || |||| ||| ||||||||||||||||||||||||||||| |  |||||||  ||||| ||||  |||| |  ||||||||||||| ||    
T  47783134 gagagtctcgtatttaaggaatagatgttaatgtgtcaagtgtgagttaaagtttcacattggctgcaagagtaattgtttaacaacatataagtgatat 47783233  T
Q  254 gactcatatatctaatgtcttgagattttgggtgaag 290  Q
    ||||||||||  ||||| ||| || ||| ||||||||    
T  47783234 gactcatatacataatgccttaaggtttagggtgaag 47783270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 307
Target Start/End: Original strand, 34159485 - 34159657
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  34159485 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgt 34159582  T
Q  233 tgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||| ||||||||||||  ||||  |||||| ||||| ||   || ||| |||||||| |||| |||| ||||||    
T  34159583 tgagtaacatataagtgttatgatccatatacctaatttcacaaggtttggggtgaagatgtgttgtcaatctca 34159657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 116 - 249
Target Start/End: Complemental strand, 17006623 - 17006492
Alignment:
Q  116 gaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattg 215  Q
    ||||| ||| |||||  ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  |||||||    
T  17006623 gaagcagaattggtttatggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattg 17006526  T
Q  216 aatgcaatagtagatgttgagaaacatataagtg 249  Q
     ||| || ||||||||||||| ||||||||||||    
T  17006525 gatgtaagagtagatgttgagtaacatataagtg 17006492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 26531623 - 26531519
Alignment:
Q  194 tgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttg 293  Q
    ||||||||||| |  ||||||  |||||||||||||||   ||||| ||||||||||||||||||||||||||||| | || || || ||||||||| ||    
T  26531623 tgtgagttaaagtttcacattagatgcaatagtagatgc--agaaaaatataagtgagatgactcatatatctaatatattaaggttatgggtgaagatg 26531526  T
Q  294 tgatgtc 300  Q
    || ||||    
T  26531525 tggtgtc 26531519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 152 - 286
Target Start/End: Original strand, 22541885 - 22542019
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    |||||||| ||| ||||||  ||||||||||||| || ||||||||||||||| |   |  |||||||||| |||| |||||||  || |||||| ||||    
T  22541885 cagagagtatcacacttaagaaagagatgttaatatgccaagtgtgagttaaagttctaatttgaatgcaaaagtatatgttgaacaaaatataaatgag 22541984  T
Q  252 atgactcatatatctaatgtcttgagattttgggt 286  Q
    |||||| |||||| | ||| ||| || ||||||||    
T  22541985 atgactgatatatttgatgacttaaggttttgggt 22542019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 256
Target Start/End: Complemental strand, 43385824 - 43385727
Alignment:
Q  159 tctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgac 256  Q
    ||||| |||||| ||||| |||||||  |||||| ||||| ||||| |  |||||| ||| ||| |||||||||||||| |||||||| |||||||||    
T  43385824 tctcacacttaaggaagatatgttaaaatgtcaattgtgatttaaagttccacattaaatacaacagtagatgttgagacacatataaatgagatgac 43385727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 151 - 271
Target Start/End: Original strand, 49879097 - 49879217
Alignment:
Q  151 acagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtga 250  Q
    ||||||||||| | | |||| | ||||||||||||||  || |||||||||||||| | | |||||||| ||||||| || ||||  ||| ||||||||     
T  49879097 acagagagtcttacatttaagggagagatgttaatgtaccatgtgtgagttaaaattataaattgaatgaaatagtatatattgaacaacgtataagtgg 49879196  T
Q  251 gatgactcatatatctaatgt 271  Q
    || |||| ||| |||||||||    
T  49879197 gaagactaatacatctaatgt 49879217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 3838251 - 3838181
Alignment:
Q  134 ggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||| |||| || | ||| |||||||||||||| | || |||||||||||||||||||||| |||||||    
T  3838251 ggtggtagatcacagatacaaagagtctcatacttgaggacgagatgttaatgtgtcaagtgtaagttaaa 3838181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 231
Target Start/End: Complemental strand, 8313508 - 8313411
Alignment:
Q  134 ggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatg 231  Q
    ||||||||||| |  |||| |||||||| | |||||||| |||||||||||||| | |||||  |||||||||   |||||| |||||| ||||||||    
T  8313508 ggtggtggatcacgaacacggagagtctgacacttaatggagagatgttaatgtattaagtgaaagttaaaattttacattgtatgcaagagtagatg 8313411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 257
Target Start/End: Original strand, 15524702 - 15524807
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    |||||||| ||| |||||| | |||||||||||| || ||||||||||||||| |   |  |||||||||| |||| |||||||  || |||||| ||||    
T  15524702 cagagagtatcacacttaagggagagatgttaatatgccaagtgtgagttaaagttctaacttgaatgcaaaagtatatgttgaacaaaatataaatgag 15524801  T
Q  252 atgact 257  Q
    ||||||    
T  15524802 atgact 15524807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 19065823 - 19065742
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    |||||||||||||| | ||||| |  ||||||| ||||||||||| |||||||  || |||||||||| ||||| |||||||    
T  19065823 aatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgatatgacccatatat 19065742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 19113713 - 19113632
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    |||||||||||||| | ||||| |  ||||||| ||||||||||| |||||||  || |||||||||| ||||| |||||||    
T  19113713 aatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgatatgacccatatat 19113632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 260
Target Start/End: Complemental strand, 21469893 - 21469816
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcat 260  Q
    |||||||||||||| | ||||| |  ||||||| ||||||||||| |||||||  || |||||||||| |||||||||    
T  21469893 aatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgatatgactcat 21469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 7844719 - 7844607
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    ||||||||||||||||| |   | ||| ||||| ||||||| ||||| ||||| |   |||||| |||||||| ||||||||||  |||||||||||||     
T  7844719 cagagagtctcatacttgagagaaagaggttaacgtgtcaattgtgatttaaagttctacattggatgcaataatagatgttgaacaacatataagtgat 7844620  T
Q  252 atgactcatatat 264  Q
    || || |||||||    
T  7844619 ataacccatatat 7844607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 43385197 - 43385109
Alignment:
Q  176 agatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    |||||||||| |||||||| ||||||||| |   | | |  ||| |||||||||||||||  |||||||| ||||||||||||||||||    
T  43385197 agatgttaatatgtcaagtatgagttaaagttctagaattgatggaatagtagatgttgaataacatatatgtgagatgactcatatat 43385109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 3982729 - 3982760
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||||||||||||||||||||||||||||    
T  3982729 aagagatgttaatgtgtcaagtgtgagttaaa 3982760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 39048327 - 39048433
Alignment:
Q  179 tgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgaga 278  Q
    ||||||| |||||| ||||| ||||| |   |||||||| |||| | || |||||||||||||||| ||||| |||||  || ||  ||||||||| |||    
T  39048327 tgttaatttgtcaattgtgacttaaagttctacattgaacgcaaaaatacatgttgagaaacatattagtgaaatgaccaatctacataatgtcttaaga 39048426  T
Q  279 ttttggg 285  Q
    |||||||    
T  39048427 ttttggg 39048433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 49878367 - 49878452
Alignment:
Q  185 tgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgt 271  Q
    |||||||||||| ||| |||||  ||| ||| ||| ||||||  ||||| ||||||||||||||||| | || ||||||||||||||    
T  49878367 tgtgtcaagtgttagtaaaaatttcactttgtatgaaatagtt-atgttaagaaacatataagtgaggtaacccatatatctaatgt 49878452  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 16851963 - 16852024
Alignment:
Q  167 ttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtag 228  Q
    |||||| ||||||||||||||||  ||||| |||||||||  ||||||| |||||| |||||    
T  16851963 ttaatggagagatgttaatgtgttcagtgtaagttaaaatttcacattgtatgcaagagtag 16852024  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 270
Target Start/End: Complemental strand, 17001196 - 17001163
Alignment:
Q  237 aaacatataagtgagatgactcatatatctaatg 270  Q
    |||||||||||||||||||||||||| |||||||    
T  17001196 aaacatataagtgagatgactcatatgtctaatg 17001163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 22538395 - 22538476
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    |||||||||||||| | ||||| |  ||||||| |||||||| || || ||||  || |||||||||| |||||||||||||    
T  22538395 aatgtgtcaagtgttatttaaagttccacattggatgcaataataaatattgaacaatatataagtgatatgactcatatat 22538476  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 307
Target Start/End: Complemental strand, 31088834 - 31088734
Alignment:
Q  209 cacattgaatgcaatagtagatgttgagaaaca--tataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctc 306  Q
    ||||||| |||||| ||||| ||||||||||||  ||||||||||||||   ||||| |||||| ||| | ||||||| ||| | ||||| ||| |||||    
T  31088834 cacattggatgcaagagtaggtgttgagaaacatatataagtgagatgatcaatatacctaatgccttaatattttggatgatggtgtgacgtcaatctc 31088735  T
Q  307 a 307  Q
    |    
T  31088734 a 31088734  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 270
Target Start/End: Original strand, 34162064 - 34162097
Alignment:
Q  237 aaacatataagtgagatgactcatatatctaatg 270  Q
    |||||||||||||||||||||||||| |||||||    
T  34162064 aaacatataagtgagatgactcatatgtctaatg 34162097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 166; Significance: 7e-89; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 29 - 292
Target Start/End: Original strand, 1599546 - 1599808
Alignment:
Q  29 ctctttctgcaatgtgtcgtcattcacacaagtgttggctcccc-ataagtctcaatgttgatatcgtacccgcttcaacatttttgggaagcggaagtg 127  Q
    |||||||||||||||||||  |||||||||||| |||||||||| ||||||| ||| | ||||||| ||   |||||||||||||| || ||||||||||    
T  1599546 ctctttctgcaatgtgtcg--attcacacaagtattggctcccccataagtcccaaaggtgatatcatatatgcttcaacattttttgggagcggaagtg 1599643  T
Q  128 gttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagta 227  Q
    ||  |||||||||||| ||| | |||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1599644 gtatgtggtggtggatagcagatacagagagtctcatgcttaatagagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagta 1599743  T
Q  228 gatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagtt 292  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  1599744 gatgttgagaaacatataagtgagatgactcatgtatctaatgtcttaagattttgggtgaagtt 1599808  T

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Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 224
Target Start/End: Original strand, 26894748 - 26894961
Alignment:
Q  10 attctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggct-ccccataagtctcaatgttgatatcgtacccgcttcaaca 108  Q
    ||||||| |||||||||| ||||||||||||||||| || |||||||||| |||||||| ||||||||||| ||||  ||||||  || || ||||||||    
T  26894748 attctcatttgtgtgatttctctttctgcaatgtgt-gt-attcacacaactgttggctaccccataagtcccaataatgatataatatccacttcaaca 26894845  T
Q  109 tttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataa 208  Q
    |||| ||| || ||||||||||| ||||||||||| ||| |||| || |||||||||||||||| |||||||||||| | |||||||||| |||||||||    
T  26894846 ttttaggggagtggaagtggttcatggtggtggattgcagacacggatagtctcatacttaatggagagatgttaatatatcaagtgtgatttaaaataa 26894945  T
Q  209 cacattgaatgcaata 224  Q
    ||||||| ||||||||    
T  26894946 cacattggatgcaata 26894961  T

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Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 7428572 - 7428479
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactca 259  Q
    |||||||| |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  7428572 acttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 7428479  T

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Target: chr6; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 102 - 297
Target Start/End: Complemental strand, 29214433 - 29214239
Alignment:
Q  102 ttcaacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtt 201  Q
    ||||||||| | ||| |||||| ||||||| |||||||||||| |  |||| |||||  ||| |||||||||||| ||||||| | || |||| | ||||    
T  29214433 ttcaacattgtgggggagcgga-gtggttcttggtggtggatcacccacacggagagcatcacacttaatgaagatatgttaacgagttaagtttaagtt 29214335  T
Q  202 aaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgat 297  Q
    |||||  ||||||| ||| || || |  ||||||  |||||| ||||||||||||||||||| ||| |||||| ||| ||||| ||||| ||||||    
T  29214334 aaaattccacattgtatgaaaaagcaattgttgaacaacatacaagtgagatgactcatatacctattgtcttaagactttggatgaagatgtgat 29214239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 133 - 300
Target Start/End: Complemental strand, 23410202 - 23410037
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  23410202 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgt 23410105  T
Q  233 tgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtc 300  Q
    |||| ||||||||||||  ||||  |||||| ||||| || | || ||| |||||||| |||| ||||    
T  23410104 tgagtaacatataagtgttatgatccatatacctaatttcataaggtttggggtgaagatgtgttgtc 23410037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 16279167 - 16279074
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactca 259  Q
    |||||||| | ||||||||||||||||||||| |||||||||   | |||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  16279167 acttaatggacagatgttaatgtgtcaagtgtaagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 16279074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 180 - 269
Target Start/End: Complemental strand, 31737288 - 31737199
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaat 269  Q
    ||||||||||||| |||||||||||||  ||||||| |||||| ||||||||||||  |||||| |||||| |||| ||||||| |||||    
T  31737288 gttaatgtgtcaattgtgagttaaaatttcacattggatgcaagagtagatgttgaacaacatacaagtgatatgattcatatacctaat 31737199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 284
Target Start/End: Original strand, 2976645 - 2976805
Alignment:
Q  124 agtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaat 223  Q
    |||||||| | ||||| |||| | ||| | |||||||| | |||| || |||| || ||| |||||||||||||||||||||   ||||||| ||| ||     
T  2976645 agtggttctttgtggtagatcacttacgcggagagtctaacacttgataaagaaatattattgtgtcaagtgtgagttaaaacttcacattgtatgaaag 2976744  T
Q  224 agtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgg 284  Q
    | ||||||||||  ||||| ||||||||||||| |||||| || ||||||| ||| |||||    
T  2976745 aatagatgttgaacaacatgtaagtgagatgacacatatacctcatgtcttaagactttgg 2976805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 24397965 - 24398047
Alignment:
Q  223 tagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatct 305  Q
    ||||| || ||||| ||||||||| |||||||||| |||||||||||||| | |||||||||||||||  |||||||| ||||    
T  24397965 tagtatatattgagcaacatataaatgagatgactaatatatctaatgtcgtaagattttgggtgaagaggtgatgtcaatct 24398047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 249
Target Start/End: Original strand, 20872442 - 20872556
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| ||||||| ||||||||||||||||||| |  ||||||| ||| || |||||||||    
T  20872442 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaacgtgtcaagtgtgagttaaagt--cacattggatgtaagagtagatgt 20872539  T
Q  233 tgagaaacatataagtg 249  Q
    |||| | ||||||||||    
T  20872540 tgagtagcatataagtg 20872556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 24175021 - 24175141
Alignment:
Q  179 tgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgaga 278  Q
    |||||||||||||||||||| |||||||     | || |||||||| || |||||||| ||||||||||||||||||| | |||| ||||||| || |||    
T  24175021 tgttaatgtgtcaagtgtgaattaaaattcagtaatgtatgcaataatatatgttgagcaacatataagtgagatgacccttatacctaatgt-ttaaga 24175119  T
Q  279 ttttgggtgaagttgtgatgtc 300  Q
     ||| ||||||| |||||||||    
T  24175120 cttttggtgaagatgtgatgtc 24175141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 33350372 - 33350291
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    |||||||||||||| | ||||| |  ||||||||||||||||||| |||||||  || |||||||||| |||||||||||||    
T  33350372 aatgtgtcaagtgttatttaaagttccacattgaatgcaatagtaaatgttgaacaatatataagtgatatgactcatatat 33350291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 256
Target Start/End: Original strand, 4031518 - 4031618
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagat 253  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||||  |  ||||||  ||  || ||| ||||||||| ||||||||||||| ||    
T  4031518 gagagtctcatacttaaggaagagatgttaatgtgtcaa--gtgagttaaggttccacattagatataagagtggatgttgagcaacatataagtgatat 4031615  T
Q  254 gac 256  Q
    |||    
T  4031616 gac 4031618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 309
Target Start/End: Complemental strand, 11554469 - 11554334
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtct 273  Q
    |||||||||||||||||| |||||||||||  |   |||||| |||||  ||||| |||| |  ||||||| ||||||||||| ||| || |||||||||    
T  11554469 agagatgttaatgtgtcatgtgtgagttaaccttctacattggatgcaggagtagttgttaaacaacatattagtgagatgacccatgtacctaatgtct 11554370  T
Q  274 tgagattttgggtgaagttgtgatgtccatctcatt 309  Q
    | || |||||||| ||  |||| |||| ||||||||    
T  11554369 taaggttttgggtcaaaatgtggtgtcaatctcatt 11554334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 283
Target Start/End: Original strand, 21988808 - 21988939
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    |||||||| ||| |||||| | ||| |||||||| |||||||||||||||||| |   |  |||||||||| |||| |||||||  || |||||| ||||    
T  21988808 cagagagtatcacacttaagggagatatgttaatatgtcaagtgtgagttaaagttctaacttgaatgcaaaagtatatgttgaacaaaatataaatgag 21988907  T
Q  252 atgactcatatatctaatgtcttgagattttg 283  Q
    |||||| |||||||| ||| ||| || |||||    
T  21988908 atgactgatatatctgatgacttaaggttttg 21988939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 255
Target Start/End: Original strand, 28365724 - 28365813
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatga 255  Q
    |||||||| | ||||||||||||||||||||| |||||||||   | |||| ||||||||||| ||  |||||||||| ||||||||||||    
T  28365724 acttaatggacagatgttaatgtgtcaagtgtaagttaaaattttatattgtatgcaatagtatat-atgagaaacatttaagtgagatga 28365813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 9452938 - 9452845
Alignment:
Q  181 ttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    ||||||| ||||||| |||||||| |  || |||| ||||||  || ||||||||| ||||||||||||| ||||| |||||||||||| ||||    
T  9452938 ttaatgtatcaagtgcgagttaaagttccaaattggatgcaagcgtcgatgttgagtaacatataagtgatatgacccatatatctaatttctt 9452845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 21984182 - 21984263
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    |||||||||||||| | ||||| |  ||||||| ||||||||||| |||||||  || |||||||||| |||||||||||||    
T  21984182 aatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgatatgactcatatat 21984263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 34515224 - 34515092
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtc-ttga 276  Q
    |||||||||||||| |||| ||||||| |   |||||||| |||| |||| || |||||||||||  | ||||||||||  |||||  ||||||| || |    
T  34515224 atgttaatgtgtcatgtgtcagttaaacttctacattgaaagcaaaagtatatattgagaaacatgaatgtgagatgaccaatatacataatgtctttca 34515125  T
Q  277 gattttgggtgaagttgtgatgtccatctcatt 309  Q
    | ||||| |||||| ||||||||| ||||||||    
T  34515124 ggttttgagtgaagatgtgatgtcaatctcatt 34515092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 1599848 - 1599951
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagat 279  Q
    |||||||||||| |||| | ||||| | | |||||  ||| || ||||||| ||||| ||||||||| |||||||||| ||||||| |||||||| || |    
T  1599848 gttaatgtgtcatgtgtcatttaaacttatacattatatgtaagagtagatattgagcaacatataaatgagatgactaatatatccaatgtcttaaggt 1599947  T
Q  280 tttg 283  Q
    ||||    
T  1599948 tttg 1599951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 309
Target Start/End: Original strand, 4852809 - 4852944
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtct 273  Q
    |||||||||||||||||| |||||||||||  |   |||||| |||||  ||||| |||| |  ||||||| ||||||||||| ||| || | |||||||    
T  4852809 agagatgttaatgtgtcatgtgtgagttaaccttctacattggatgcaggagtagttgttaaacaacatattagtgagatgacccatgtaccgaatgtct 4852908  T
Q  274 tgagattttgggtgaagttgtgatgtccatctcatt 309  Q
    | ||||||||| | ||  |||| |||| ||||||||    
T  4852909 taagattttggatcaaaatgtggtgtcaatctcatt 4852944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 18090021 - 18089938
Alignment:
Q  224 agtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||||||||| |||||||||||| ||||||||   ||||| |||||| ||| || |||||||||||| |||| |||| ||||||    
T  18090021 agtagatgttcagaaacatataattgagatgaacaatatacctaatgccttaaggttttgggtgaagatgtggtgtcaatctca 18089938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 270
Target Start/End: Complemental strand, 19660426 - 19660311
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||||||||||||||   |  |||| || ||||| |||||||||||||| |  | |||||||| ||| ||||| ||||||  ||||||||| ||| |||    
T  19660426 agagtctcatacttaagagatggatgatagtgtgttaagtgtgagttaaagttcctcattgaatccaagagtagttgttgaacaacatataaatgatatg 19660327  T
Q  255 actcatatatctaatg 270  Q
     |||||||||||||||    
T  19660326 cctcatatatctaatg 19660311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 262
Target Start/End: Complemental strand, 9449690 - 9449601
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatat 262  Q
    |||||||||||| |||||||||||||||||  ||   |||||| ||| |  |||| || |||| |||||||||||||||| |||||||||    
T  9449690 aagagatgttaacgtgtcaagtgtgagttaccattctacattggatggatgagtatattttgaaaaacatataagtgagaagactcatat 9449601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 26894967 - 26895011
Alignment:
Q  253 tgactcatatatctaatgtcttgagattttgggtgaagttgtgat 297  Q
    ||||||| |||||||||||| | ||||||||||||||||||||||    
T  26894967 tgactcaaatatctaatgtcataagattttgggtgaagttgtgat 26895011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 256
Target Start/End: Original strand, 15878847 - 15878925
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgac 256  Q
    ||||||||||||||| ||||||||||  | | |||||| ||| || ||||||| ||||  ||||||||| |||||||||    
T  15878847 atgttaatgtgtcaaatgtgagttaacgttatacattggatggaagagtagattttgaacaacatataattgagatgac 15878925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 26597684 - 26597588
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatata 263  Q
    |||||||| |||||||||||| ||||||||||||| ||||||   |||||| | |||| |||| ||| | || ||||||||| |||||| |||||||||    
T  26597684 acttaatggagagatgttaatatgtcaagtgtgagctaaaattctacattgtaagcaaaagtatatg-tcag-aacatataaatgagattactcatata 26597588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 282
Target Start/End: Original strand, 20873794 - 20873889
Alignment:
Q  185 tgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagatttt 282  Q
    |||||||||||||||| |||||  ||||||  |||||| |||| || ||||||||||||| |||||| ||   | ||||||||||||||| |||||||    
T  20873794 tgtgtcaagtgtgagtaaaaatttcacattatatgcaagagta-atattgagaaacatat-agtgaggtggtccgtatatctaatgtcttaagatttt 20873889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 307
Target Start/End: Complemental strand, 22826818 - 22826721
Alignment:
Q  210 acattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||||||||  |||||||||| ||||  |  | ||||||| ||||||||||||| |||| ||||| |||||||| || ||| |||| |||| ||||||    
T  22826818 acattgaattgaatagtagattttgaatagaaaataagtgtgatgactcatataactaaggtctttagattttgtgtaaagatgtggtgtcaatctca 22826721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 23407595 - 23407550
Alignment:
Q  237 aaacatataagtgagatgactcatatatctaatgtcttgagatttt 282  Q
    |||||||||||||||||||||||||| | ||||| ||| |||||||    
T  23407595 aaacatataagtgagatgactcatatgtttaatgccttaagatttt 23407550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 27436916 - 27436867
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||| | |||||||| |||||||| ||||||||||||| ||||||||    
T  27436916 agagtctgaaacttaatgtagagatgtcaatgtgtcaagtgcgagttaaa 27436867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 20874179 - 20874231
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||| |||  ||||| | ||||||||||||||||||| |||||||||||    
T  20874179 cagagagtttcacgcttaagggagagatgttaatgtgtcaaatgtgagttaaa 20874231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 26595976 - 26595900
Alignment:
Q  224 agtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtc 300  Q
    |||||||||| |||||||||||||| |||||||  ||  | |||||||||| || |||||| ||| | |||||||||    
T  26595976 agtagatgtttagaaacatataagtaagatgaccaatgcacctaatgtcttaaggttttggatgatgatgtgatgtc 26595900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 151 - 296
Target Start/End: Complemental strand, 50332060 - 50331915
Alignment:
Q  151 acagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtga 250  Q
    ||||||||| |||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50332060 acagagagtttcatgcttaatagagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtga 50331961  T
Q  251 gatgactcatatatctaatgtcttgagattttgggtgaagttgtga 296  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  50331960 gatgactcatgtatctaatgtcttaagattttgggtgaagttgtga 50331915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 220
Target Start/End: Original strand, 36095949 - 36096164
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccca-taagtctcaatgttgatatcgtacccgct 102  Q
    |||||||||||||| | |||| ||  | ||||||||||||||||  | ||||||||||||||  |||||  || ||| ||||| ||||||| ||  ||||    
T  36095949 gacatcattctcacctttgtggttgttttttctgcaatgtgtcg--aatcacacaagtgttgtatcccccgtatgtcccaatggtgatatcatatacgct 36096046  T
Q  103 tcaacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    |||||||||||||| |||||||||| ||||||||||||||||||  ||||  ||||| || || |||||  ||||||  |||||||||||||||| ||||    
T  36096047 tcaacatttttggggagcggaagtgcttcgtggtggtggatcgcggacacgaagagtatcgtatttaattgagagattgtaatgtgtcaagtgtgggtta 36096146  T
Q  203 aaataacacattgaatgc 220  Q
    |||||| |||||||||||    
T  36096147 aaataatacattgaatgc 36096164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 20935084 - 20934987
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatata 263  Q
    |||||||| |||||||||||||||||| ||||||||||||||   | |||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  20935084 acttaatggagagatgttaatgtgtcaggtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagatgactcatata 20934987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 32976558 - 32976461
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatata 263  Q
    |||||||| |||||||||||||| ||||||||||||||||||   | |||| ||||||||||||||  |||||||||| ||||||||||||||||||||    
T  32976558 acttaatggagagatgttaatgtatcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactcatata 32976461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 50332173 - 50332062
Alignment:
Q  5 acatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccc-ataagtctcaatgttgatatcgtacccgctt 103  Q
    |||||||| ||||| |||||||| |||||||||||||||| ||  ||||||||||| ||||||||||| ||||||| ||||| ||||||| || | ||||    
T  50332173 acatcattatcactcgtgtgattgctctttctgcaatgtgacg--attcacacaagcgttggctcccccataagtcccaatggtgatatcatatctgctt 50332076  T
Q  104 caacatttttggga 117  Q
    ||||||||||||||    
T  50332075 caacatttttggga 50332062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 259
Target Start/End: Complemental strand, 42400470 - 42400377
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactca 259  Q
    |||||||| |||||||||||||||||| ||||||||||||||   | |||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  42400470 acttaatggagagatgttaatgtgtcacgtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactca 42400377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 12746241 - 12746101
Alignment:
Q  4 gacatcattctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcccca-taagtctcaatgttgatatcgtacccgct 102  Q
    |||||||||||||||||||||||| || | |||||||||| |||  | |||||||||||||| ||||||  ||| || ||||| ||||||| ||  ||||    
T  12746241 gacatcattctcacttgtgtgattgct-tctctgcaatgtatcg--aatcacacaagtgttgtctcccctgtaattcccaatggtgatatcatatacgct 12746145  T
Q  103 tcaacatttttgggaagcggaagtggttcgtggtggtggatcgc 146  Q
    |||||||||||||  ||||||| || || |||||||||||||||    
T  12746144 tcaacatttttggagagcggaaatgctttgtggtggtggatcgc 12746101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 295
Target Start/End: Complemental strand, 19817535 - 19817358
Alignment:
Q  116 gaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattg 215  Q
    ||||| ||| |||||  ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  |||||||    
T  19817535 gaagcagaattggtttatggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattg 19817438  T
Q  216 aatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtg 295  Q
     ||| || ||||||||||||| ||||||||||||  ||||  |||||| ||||| || | || ||| |||||||| ||||    
T  19817437 gatgtaagagtagatgttgagtaacatataagtgttatgatccatatacctaatttcataaggtttggggtgaagatgtg 19817358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 17764120 - 17764217
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatata 263  Q
    |||||||| ||||||||||||||| |||||||||||||||||  ||||||| | || | |||| ||| |||| |||||||||||||||| |||||||||    
T  17764120 acttaatggagagatgttaatgtgacaagtgtgagttaaaattccacattgtaagccagagtatatg-tgagcaacatataagtgagattactcatata 17764217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 19065440 - 19065537
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatata 263  Q
    |||||||| ||||||||||||||| |||||||||||||||||  ||||||| | || | |||| ||| |||| |||||||||||||||| |||||||||    
T  19065440 acttaatggagagatgttaatgtgacaagtgtgagttaaaattccacattgtaagccagagtatatg-tgagcaacatataagtgagattactcatata 19065537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 307
Target Start/End: Original strand, 431968 - 432109
Alignment:
Q  166 cttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatc 265  Q
    ||||||| |||||| |||||||||||| |||||||||||||   |||||| |||||| |||| |||||||||||||||| ||  |||| |  |||||| |    
T  431968 cttaatggagagatattaatgtgtcaattgtgagttaaaattcgacattggatgcaagagtatatgttgagaaacatatgaggaagattatccatataac 432067  T
Q  266 taatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||||  ||  || |||||||||||  |||||||| ||||||    
T  432068 taatgctttaggactttgggtgaagaagtgatgtcgatctca 432109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 25225403 - 25225306
Alignment:
Q  177 gatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    ||||||||| |||||  ||||||||||| |  ||||||||||||||||||||||| ||| ||| ||| ||||| |||||| |||||| ||||||||||    
T  25225403 gatgttaatatgtcatttgtgagttaaagttccacattgaatgcaatagtagatggtgaaaaagatacaagtgtgatgacccatatacctaatgtctt 25225306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 264
Target Start/End: Original strand, 40056502 - 40056614
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    ||||||||||||||||| |   | ||||||||| ||||||||||||| ||||| |  ||||||| |||||||| ||||||||||  |||||||||||||     
T  40056502 cagagagtctcatacttgagagaaagatgttaacgtgtcaagtgtgatttaaagttccacattggatgcaataatagatgttgaacaacatataagtgat 40056601  T
Q  252 atgactcatatat 264  Q
    || || |||||||    
T  40056602 ataacccatatat 40056614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 173 - 282
Target Start/End: Complemental strand, 34849897 - 34849788
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtc 272  Q
    |||||||||||||||||||  ||||| ||||| |  |||||||||| |||| ||||||| |||| || ||||||||||||| ||| || ||  |||||||    
T  34849897 aagagatgttaatgtgtcatatgtgaattaaagtttcacattgaattcaatggtagatggtgaggaaaatataagtgagataacttatgtacataatgtc 34849798  T
Q  273 ttgagatttt 282  Q
    || |||||||    
T  34849797 ttaagatttt 34849788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 14044290 - 14044378
Alignment:
Q  176 agatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    ||||||||||||||||||||||| ||||| |  || |||| ||||||||||| |||||||  ||||| ||||||| ||||| |||||||    
T  14044290 agatgttaatgtgtcaagtgtgatttaaagttccatattggatgcaatagtaaatgttgaacaacatttaagtgatatgacccatatat 14044378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 274
Target Start/End: Complemental strand, 32970533 - 32970437
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    |||||||| |||||| ||||||| ||| |  ||||||  |||||| |||||||| ||| ||| |||||||||||||||| |||||| ||||||||||    
T  32970533 atgttaatatgtcaaatgtgagtgaaagtttcacattagatgcaagagtagatgctgaaaaatatataagtgagatgacccatatacctaatgtctt 32970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 264
Target Start/End: Complemental strand, 30171283 - 30171172
Alignment:
Q  153 agagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgaga 252  Q
    |||||||||||||||| |   | ||| || |||||||||||||| | ||||| |  ||||||| ||||||||||| |||||||  || |||||||||| |    
T  30171283 agagagtctcatacttgagataaagaggtcaatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgata 30171184  T
Q  253 tgactcatatat 264  Q
    ||||||||||||    
T  30171183 tgactcatatat 30171172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 178 - 282
Target Start/End: Original strand, 20779566 - 20779670
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgag 277  Q
    ||||||||||||||| |||||||||| || | ||| || ||| || ||||||| ||||  |||||||||||||||||||  | |||  ||||||||||||    
T  20779566 atgttaatgtgtcaaatgtgagttaacattatacactggatggaagagtagattttgaacaacatataagtgagatgaccgaaatacataatgtcttgag 20779665  T
Q  278 atttt 282  Q
     ||||    
T  20779666 gtttt 20779670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 284
Target Start/End: Original strand, 39187291 - 39187423
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    |||||||||||| |||||| | |||||| ||||| |||||||||||||||||| |   |  || ||||||| ||||  ||||||  || |||||| ||||    
T  39187291 cagagagtctcacacttaagggagagattttaatatgtcaagtgtgagttaaagttctatgttaaatgcaaaagtatgtgttgaacaaaatataaatgag 39187390  T
Q  252 atgactcatatatctaatgtcttgagattttgg 284  Q
    |||||| |||||||| ||| ||| || ||||||    
T  39187391 atgactgatatatctgatgacttaaggttttgg 39187423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 40417860 - 40417916
Alignment:
Q  213 ttgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaat 269  Q
    ||||||| ||||||||||| |||||||||||||||||||||| | |||||| |||||    
T  40417860 ttgaatgtaatagtagatggtgagaaacatataagtgagatggcccatatacctaat 40417916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 274
Target Start/End: Original strand, 52753015 - 52753115
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtct 273  Q
    |||||||||||||| | | || ||||||||||| | | |||||||| ||||||| || ||||  |||||||||||| || |||| ||| |||||||||||    
T  52753015 agagatgttaatgtattatgtatgagttaaaattataaattgaatgaaatagtatatattgaacaacatataagtgcgaagactaatacatctaatgtct 52753114  T
Q  274 t 274  Q
    |    
T  52753115 t 52753115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 283
Target Start/End: Complemental strand, 9611832 - 9611703
Alignment:
Q  155 agagtctcatacttaatgaagagatgt--taatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgaga 252  Q
    |||||||||||||||| ||||||||||  |||||||||| |||||| ||||| |   || ||| |||||||||||||| || || || || | |||||||    
T  9611832 agagtctcatacttaa-gaagagatgtgttaatgtgtcatgtgtgatttaaacttctacgttggatgcaatagtagattttaagcaaaatgttagtgaga 9611734  T
Q  253 tgactcatatatctaatgtcttgagattttg 283  Q
    |||| | |||| |||||||||| || |||||    
T  9611733 tgacccgtatacctaatgtcttaaggttttg 9611703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 287
Target Start/End: Original strand, 10020152 - 10020227
Alignment:
Q  212 attgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtg 287  Q
    |||||||| ||  |||||| ||||  ||||||||||||||||||||||||||  |||| |||| ||||||||||||    
T  10020152 attgaatggaagggtagattttgaacaacatataagtgagatgactcatatacttaatatcttaagattttgggtg 10020227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 269
Target Start/End: Complemental strand, 6087930 - 6087831
Alignment:
Q  168 taatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatcta 267  Q
    |||||||||||| ||||| | |||||||  |||||||||  |||| || |||||| | ||||||||||| ||||||||||||  || ||||||||| |||    
T  6087930 taatgaagagattttaatatctcaagtg--agttaaaattccacaatgtatgcaagattagatgttgagcaacatataagtggcataactcatataccta 6087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 307
Target Start/End: Complemental strand, 32971238 - 32971108
Alignment:
Q  177 gatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttga 276  Q
    |||||||||| |||||||||||||| |  |   |||||||||  |||||||||| ||||  |  | ||||||| ||||||||||||| |||| ||||| |    
T  32971238 gatgttaatgagtcaagtgtgagtttacgttctacattgaattgaatagtagattttgaatagaaaataagtgtgatgactcatataactaaggtcttta 32971139  T
Q  277 gattttgggtgaagttgtgatgtccatctca 307  Q
    ||||||| || ||| |||| |||| ||||||    
T  32971138 gattttgtgtaaagatgtggtgtcaatctca 32971108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 20788453 - 20788534
Alignment:
Q  183 aatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    |||||||||||||| | ||||| |  ||||||| || |||||||| |||||||  || |||||||||| |||||||||||||    
T  20788453 aatgtgtcaagtgttatttaaagttccacattggattcaatagtaaatgttgaacaatatataagtgatatgactcatatat 20788534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 271
Target Start/End: Complemental strand, 37837604 - 37837511
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgt 271  Q
    |||||||||||| | |||||| ||||| | | || ||| ||| || ||||||| ||||||||||||||| |||||||||  ||||| |||||||    
T  37837604 atgttaatgtgttatgtgtgatttaaacttatacgttggatgaaaaagtagatattgagaaacatataaatgagatgaccaatataactaatgt 37837511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 6438865 - 6438961
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    ||||||||||||||  ||||||||||| |  || ||||||| ||  | ||||||  ||||||| |||||||||||||| | |||||||||| |||||    
T  6438865 atgttaatgtgtcatatgtgagttaaagtttcatattgaattcatcaatagatgaagagaaacgtataagtgagatgattaatatatctaacgtctt 6438961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 295
Target Start/End: Original strand, 39183069 - 39183183
Alignment:
Q  180 gttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagat 279  Q
    ||||| ||||||||||||| ||||| |   | |||| |||||||| ||||||||||  ||||||||||||| || || ||||||| ||||| ||| || |    
T  39183069 gttaacgtgtcaagtgtgatttaaagttctatattggatgcaataatagatgttgaacaacatataagtgatataacccatatat-taatgacttaaggt 39183167  T
Q  280 tttgggtgaagttgtg 295  Q
    || |||||||| ||||    
T  39183168 ttagggtgaagatgtg 39183183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 307
Target Start/End: Complemental strand, 20934353 - 20934187
Alignment:
Q  141 gatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaac 240  Q
    ||||||||||| | | ||||||| || ||| | ||||||||| |||| ||| |||||| ||||| |   |||||| |||||||| || || ||||| |||    
T  20934353 gatcgcatacatatatagtctcacacataagggagagatgtttatgtttcatgtgtgacttaaacttctacattgtatgcaataatatatattgagcaac 20934254  T
Q  241 atataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    ||||||| |||| ||   ||||| |||||| ||| |||||||  |||||  |||| |||| ||||||    
T  20934253 atataagcgagaagaacaatatacctaatgccttaagattttacgtgaatatgtggtgtcaatctca 20934187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 12125648 - 12125579
Alignment:
Q  168 taatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaga 237  Q
    ||||| ||||||| ||||||||||| || ||||||||||  ||||||  ||| || ||||||||||||||    
T  12125648 taatgcagagatgataatgtgtcaaatgcgagttaaaatttcacattttatgtaaaagtagatgttgaga 12125579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 257
Target Start/End: Complemental strand, 30170006 - 30169901
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    |||||||| ||| |||||| | ||| |||||||| |||||||||||||||||| |   |  ||||||| || |||| |||||||  || |||||| ||||    
T  30170006 cagagagtatcacacttaagggagatatgttaatatgtcaagtgtgagttaaagttctaacttgaatgtaaaagtatatgttgaacaaaatataaatgag 30169907  T
Q  252 atgact 257  Q
    ||||||    
T  30169906 atgact 30169901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 37836814 - 37836673
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagat 253  Q
    |||||||| | |||||| | ||| ||||||||||||||  ||| ||||||| |  ||| | | | |||| |||| ||||||| |||||||||| ||||||    
T  37836814 gagagtctgacacttaagggagatatgttaatgtgtcacttgtaagttaaagttccacgtcggaagcaaaagtaaatgttgaaaaacatataaatgagat 37836715  T
Q  254 gactcatatatctaatgtcttgagattttgggtgaagttgtg 295  Q
    ||   |  ||||||||| ||| |||||||| |||||| ||||    
T  37836714 gaacaacgtatctaatgacttaagattttgagtgaagatgtg 37836673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 44904856 - 44904897
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgt 196  Q
    |||||||||||||| | |||||||||||||||| ||||||||    
T  44904856 agagtctcatacttgaggaagagatgttaatgtatcaagtgt 44904897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 263
Target Start/End: Original strand, 50241485 - 50241570
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatata 263  Q
    |||||||||||||||||||||||||||||   | | || ||  || |||| ||  |||  ||||||||||||||||||||||||||    
T  50241485 atgttaatgtgtcaagtgtgagttaaaattctatagtggatataagagtaaattatgaataacatataagtgagatgactcatata 50241570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 2250975 - 2251007
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaa 205  Q
    |||||||||||||||||||||| ||||||||||    
T  2250975 aagagatgttaatgtgtcaagtatgagttaaaa 2251007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 274
Target Start/End: Original strand, 9268349 - 9268445
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    ||||||||||||||  ||| ||||||| |  || ||||||| ||  | ||||||  ||||||  |||||||||||||| |||||||||||| |||||    
T  9268349 atgttaatgtgtcatatgtaagttaaagtttcatattgaattcatcaatagatgaagagaaatgtataagtgagatgattcatatatctaacgtctt 9268445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 50 - 307
Target Start/End: Complemental strand, 50421 - 50164
Alignment:
Q  50 attcacacaagtgttggctccccataagtctcaatgttgatatcgtacccgcttcaacatttttgggaagcggaagtggttcgtggtggtggatcgcata 149  Q
    |||||||||||||||||||| | | |||||  |||  ||||||| || |||||||||| ||||| || ||| |||||||||||| ||||||||||||  |    
T  50421 attcacacaagtgttggctctcgaaaagtcctaataatgatatcatatccgcttcaacgttttttgggagcagaagtggttcgtagtggtggatcgcgga 50322  T
Q  150 cacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtg 249  Q
    || |||||||||| ||||||||| |||||  ||||| |||||||||| |||||||||||||| |||||||||||||||||||| ||  |||||||||  |    
T  50321 catagagagtctcgtacttaatggagagaatttaatatgtcaagtgtcagttaaaataacacgttgaatgcaatagtagatgtagaacaacatataaccg 50222  T
Q  250 agatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||| ||||| ||||| |||||||  ||| ||||||||||||||||||||| ||||||    
T  50221 agataactcaaatatcaaatgtctcaagaatttgggtgaagttgtgatgtcaatctca 50164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 184 - 309
Target Start/End: Original strand, 14522 - 14647
Alignment:
Q  184 atgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttg 283  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||| |||| ||||||||| ||||||||    
T  14522 atgtatcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataaatgagatgactcacatatttaatgtcttaagattttg 14621  T
Q  284 ggtgaagttgtgatgtccatctcatt 309  Q
    ||||||||||||||||| ||||||||    
T  14622 ggtgaagttgtgatgtcaatctcatt 14647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 143
Target Start/End: Original strand, 14373 - 14503
Alignment:
Q  12 tctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcc-ccataagtctcaatgttgatatcgtacccgcttcaacatt 110  Q
    |||||||||||||||| | |||||| |||||||| |  ||||||||||||||||||||| |||||||||| |||| ||||||| || |||||||||||||    
T  14373 tctcacttgtgtgattgccctttcttcaatgtgttg--attcacacaagtgttggctcctccataagtcttaatggtgatatcatatccgcttcaacatt 14470  T
Q  111 tttgggaagcggaagtggttcgtggtggtggat 143  Q
    |||| | |||||| |||||||||| ||||||||    
T  14471 tttgaggagcggatgtggttcgtgatggtggat 14503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 263
Target Start/End: Original strand, 43989681 - 43989778
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatata 263  Q
    |||||||  |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||| |||||||||| |||||||||||| |||||||    
T  43989681 acttaattgagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagatgattcatata 43989778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 300
Target Start/End: Original strand, 29912532 - 29912714
Alignment:
Q  116 gaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattg 215  Q
    ||||| ||| |||||  ||||||| |||| ||||  ||||||||||| ||||| |   ||| ||||||||| ||||||||||||||||| |  |||||||    
T  29912532 gaagcagaattggtttatggtggtagatctcatatgcagagagtctcgtacttgagagagaaatgttaatgcgtcaagtgtgagttaaagt--cacattg 29912629  T
Q  216 aatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtc 300  Q
     ||| || ||||||||||||| ||||||||||||  ||||  |||||| ||||| || | |||||| |||||||| |||| ||||    
T  29912630 gatgtaagagtagatgttgagtaacatataagtgttatgatccatatacctaatttcataagatttggggtgaagatgtgttgtc 29912714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 299
Target Start/End: Complemental strand, 38789060 - 38788897
Alignment:
Q  134 ggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgtt 233  Q
    ||||||||||| || |||| |||||||| | |||||||| |||||||||||||||| |||||| |||||||||  ||||||| |||||| |||||||  |    
T  38789060 ggtggtggatcacaaacacggagagtctgacacttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagtagat-at 38788962  T
Q  234 gagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgt 299  Q
    ||| ||||||||| | | ||||  |||||   ||||| ||||||| ||||| ||||| ||||||||    
T  38788961 gagcaacatataaataatatgatccatat-cgtaatgccttgagactttggatgaaggtgtgatgt 38788897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 307
Target Start/End: Original strand, 45406685 - 45406838
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagat 253  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||   |||||  ||| || || |||||||||||||||||| || |||||    
T  45406685 gagagtctcatacttaatggagaaatgttaatgtgtcaattgtgagttaaaatttgacatttgatgtaagaggagatgttgagaaacatatgagggagat 45406784  T
Q  254 gactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
     |  |||||| ||||||  ||  || ||||| |||||  |||||||| ||||||    
T  45406785 tatccatatacctaatgctttaggactttggttgaagaagtgatgtcgatctca 45406838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 17510374 - 17510234
Alignment:
Q  97 cccgcttcaacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgt 196  Q
    |||| ||||||||||| ||| || || |||||||| ||||||| |||| ||  |||| ||||||| | ||||| || ||||||||||||||||||| | |    
T  17510374 cccgattcaacattttaggggagtgggagtggttcttggtggtcgatcacaggcacaaagagtctgacacttactggagagatgttaatgtgtcaaattt 17510275  T
Q  197 gagttaaaataacacattgaatgcaatagtagatgttgaga 237  Q
    |||||||| |  ||||||  ||| || ||||||||||||||    
T  17510274 gagttaaagtttcacattttatgtaagagtagatgttgaga 17510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 17542840 - 17542980
Alignment:
Q  97 cccgcttcaacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgt 196  Q
    |||| ||||||||||| ||| || || |||||||| ||||||| |||| ||  |||| ||||||| | ||||| || ||||||||||||||||||| | |    
T  17542840 cccgattcaacattttaggggagtgggagtggttcttggtggtcgatcacaggcacaaagagtctgacacttactggagagatgttaatgtgtcaaattt 17542939  T
Q  197 gagttaaaataacacattgaatgcaatagtagatgttgaga 237  Q
    |||||||| |  ||||||  ||| || ||||||||||||||    
T  17542940 gagttaaagtttcacattttatgtaagagtagatgttgaga 17542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 249
Target Start/End: Original strand, 2452101 - 2452195
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtg 249  Q
    |||||||||||||||   |||||||| ||||||| |||||||||||||||| |  |||||||||||||| |||| |||| || |||||||||||||    
T  2452101 gagagtctcatacttggagaagagattttaatgtttcaagtgtgagttaaagtttcacattgaatgcaaaagtaaatgtcga-aaacatataagtg 2452195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 193 - 298
Target Start/End: Original strand, 22528932 - 22529037
Alignment:
Q  193 gtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagtt 292  Q
    ||||||||||||||   |||||| |||||| |||| |||||||||||||||||| ||| ||||| | ||||| ||||  |||||||| |||| ||||| |    
T  22528932 gtgtgagttaaaattttacattgtatgcaagagtaaatgttgagaaacatataactgatatgacccgtatatttaataccttgagatattggatgaagat 22529031  T
Q  293 gtgatg 298  Q
    ||||||    
T  22529032 gtgatg 22529037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 4120098 - 4120006
Alignment:
Q  159 tctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgag 251  Q
    ||||| |||||||| ||||||  ||| ||||||||||| |||||||||  ||||||| || ||| ||| ||||||||| ||||||||||||||    
T  4120098 tctcacacttaatggagagatactaacgtgtcaagtgttagttaaaatttcacattggattcaaaagtggatgttgagcaacatataagtgag 4120006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 237
Target Start/End: Complemental strand, 17474890 - 17474750
Alignment:
Q  97 cccgcttcaacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgt 196  Q
    |||| ||||||||||| |||  | || |||||||| ||||||| |||| ||  |||| ||||||| | ||||| || ||||||||||||||||||| | |    
T  17474890 cccgattcaacattttaggggtgtgggagtggttcttggtggtcgatcacaggcacaaagagtctgacacttactggagagatgttaatgtgtcaaattt 17474791  T
Q  197 gagttaaaataacacattgaatgcaatagtagatgttgaga 237  Q
    |||||||| |  ||||||  ||| || ||||||||||||||    
T  17474790 gagttaaagtttcacattttatgtaagagtagatgttgaga 17474750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 17578324 - 17578464
Alignment:
Q  97 cccgcttcaacatttttgggaagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgt 196  Q
    |||| ||||||||||| |||  | || |||||||| ||||||| |||| ||  |||| ||||||| | ||||| || ||||||||||||||||||| | |    
T  17578324 cccgattcaacattttaggggtgtgggagtggttcttggtggtcgatcacaggcacaaagagtctgacacttactggagagatgttaatgtgtcaaattt 17578423  T
Q  197 gagttaaaataacacattgaatgcaatagtagatgttgaga 237  Q
    |||||||| |  ||||||  ||| || ||||||||||||||    
T  17578424 gagttaaagtttcacattttatgtaagagtagatgttgaga 17578464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 274
Target Start/End: Complemental strand, 42079050 - 42078941
Alignment:
Q  167 ttaatgaagagatgttaatgtgtcaagtgtgagttaaaat--aacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatat 264  Q
    |||| |||||||||||||||||||| |||||||||||| |   | |||||  |||||| ||||||| ||||| ||||| ||||||||||||   ||||||    
T  42079050 ttaaggaagagatgttaatgtgtcatgtgtgagttaaacttctatacatttgatgcaagagtagatattgagcaacatgtaagtgagatgatcaatatat 42078951  T
Q  265 ctaatgtctt 274  Q
    || |||||||    
T  42078950 cttatgtctt 42078941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 307
Target Start/End: Complemental strand, 42080952 - 42080812
Alignment:
Q  166 cttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatc 265  Q
    ||||||| |||||| |||||||||||   ||||||||||||   |||||  |||||| ||||||||||||||||||||| || ||||| |  |||||| |    
T  42080952 cttaatggagagatattaatgtgtcagtcgtgagttaaaatttgacattagatgcaagagtagatgttgagaaacatatgag-gagattatccatatacc 42080854  T
Q  266 taatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||||  ||  || |||||||||||  |||||||| ||||||    
T  42080853 taatgctttaggactttgggtgaagaagtgatgtcgatctca 42080812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 297
Target Start/End: Complemental strand, 6677207 - 6677088
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgag 277  Q
    |||||||| ||| ||||||||||||||||   | |||||||| ||  ||| || ||||  |||||||| ||||||||||||||||| | |||||||| ||    
T  6677207 atgttaatttgttaagtgtgagttaaaattctatattgaatgaaaaggtaaattttgaacaacatatatgtgagatgactcatataccaaatgtcttaag 6677108  T
Q  278 attttgggtgaagttgtgat 297  Q
     |||| | ||||| ||||||    
T  6677107 gttttagatgaagatgtgat 6677088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 299
Target Start/End: Original strand, 20181326 - 20181468
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagat 253  Q
    ||||||||||||||||| | |||||||||||||  |||| ||||| ||||| |   | |||| || ||| ||||||| |||| ||||||| |||| | ||    
T  20181326 gagagtctcatacttaaaggagagatgttaatgcatcaaatgtgatttaaagttctatattggattcaagagtagatattgaaaaacatacaagtaatat 20181425  T
Q  254 gactcatatatctaatgtcttgagattttgggtgaagttgtgatgt 299  Q
    ||| | |||| ||||||   | || |||||||||||| ||||||||    
T  20181426 gacccgtatacctaatg---taaggttttgggtgaagatgtgatgt 20181468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 4110437 - 4110362
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatga 255  Q
    ||||||||||||||  | || |||||| ||  |||||||||||||||||| || ||||| ||||| ||||||||||||    
T  4110437 atgttaatgtgtca--tatgggttaaactactacattgaatgcaatagtatatattgagcaacatgtaagtgagatga 4110362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 24708451 - 24708517
Alignment:
Q  182 taatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagt 248  Q
    ||||||||||| | ||||||||||| | |||||| ||| || |||| |||||||| |||||||||||    
T  24708451 taatgtgtcaattatgagttaaaattatacattgtatgtaagagtatatgttgagcaacatataagt 24708517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 15464443 - 15464394
Alignment:
Q  153 agagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    ||||||||||| |||||| | ||||||| |||||||||| ||||||||||    
T  15464443 agagagtctcacacttaaggtagagatgctaatgtgtcatgtgtgagtta 15464394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 2929446 - 2929518
Alignment:
Q  184 atgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgac 256  Q
    ||||||||| ||||| ||||| |  ||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  2929446 atgtgtcaattgtgacttaaagttccacattagatgtaaaagtagatgttaagaaacatatatgtgagatgac 2929518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 202
Target Start/End: Complemental strand, 5786019 - 5785971
Alignment:
Q  154 gagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagtta 202  Q
    |||||||||||||| || | ||| | |||||||||||||||||||||||    
T  5786019 gagagtctcatactgaagggagataagttaatgtgtcaagtgtgagtta 5785971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 135 - 300
Target Start/End: Complemental strand, 47277 - 47112
Alignment:
Q  135 gtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttg 234  Q
    |||||||||| | |||||||||||||| | | || ||  ||| |||||  ||| |||||||||||||||| |  ||| ||| ||| ||||||||||||||    
T  47277 gtggtggatcacttacacagagagtctaacatttgatagagaaatgttgttgtatcaagtgtgagttaaagtttcacgttgtatggaatagtagatgttg 47178  T
Q  235 agaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtc 300  Q
    |  ||||||||||||||||||| || ||| || ||||||| ||| ||||||||||| |||| ||||    
T  47177 aacaacatataagtgagatgacacacatacctcatgtcttaagactttgggtgaagatgtggtgtc 47112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1345 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1345
Description:

Target: scaffold1345; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 261
Target Start/End: Original strand, 1847 - 1942
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcata 261  Q
    |||||||  |||||||||||||||||||||||||||||||||   | |||| ||||||||||||||| |||||||||| |||||||||| |||||||    
T  1847 acttaattgagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagataactcata 1942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 305
Target Start/End: Original strand, 30812 - 30970
Alignment:
Q  146 catacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatata 245  Q
    |||||||| |||||| |||||||||   |||||| ||||||||||| |||||||||||  |   |||||   ||| |||||| || ||||| ||||||||    
T  30812 catacacaaagagtcccatacttaagagagagatattaatgtgtcatgtgtgagttaacttct-acattaggtgcgatagtatatattgagcaacatata 30910  T
Q  246 agtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatct 305  Q
    | |||||||||| |||||||||||||| | |||||||||||||||  |||||||| ||||    
T  30911 aatgagatgactaatatatctaatgtcataagattttgggtgaagaggtgatgtcaatct 30970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1750 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold1750
Description:

Target: scaffold1750; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 371 - 274
Alignment:
Q  165 acttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatata 263  Q
    |||||||| ||||||||||||||| |||||||||||||||||   | |||| ||||||||||||||| |||||||||| |||| |||||||||| ||||    
T  371 acttaatggagagatgttaatgtggcaagtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagcgagatgactcgtata 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 295
Target Start/End: Complemental strand, 31137 - 30977
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| |||||||| |  ||||||| ||| || |||||||||    
T  31137 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgt 31040  T
Q  233 tgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtg 295  Q
    |||| ||||||||||||  ||||  |||||| ||||| || | || ||| |||||||| ||||    
T  31039 tgagtaacatataagtgttatgatccatatacctaatttcataaggtttggggtgaagatgtg 30977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 5137 - 5233
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataa 246  Q
    |||| |||||||| | |||||||| |||||||||||||| | |||||| |||||||||  ||||||| |||||| |||||||| |||| |||||||||    
T  5137 acacggagagtctgacacttaatggagagatgttaatgttttaagtgtaagttaaaatttcacattgtatgcaagagtagatg-tgagcaacatataa 5233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 12543 - 12640
Alignment:
Q  177 gatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    |||||||||||||||  ||||| ||||| |  || ||||||||||  | ||||||  ||||||||||||  ||||||||  |||||||||||||||||    
T  12543 gatgttaatgtgtcatatgtgaattaaagttccatattgaatgcatcaatagatgaagagaaacatatacatgagatgatccatatatctaatgtctt 12640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 309
Target Start/End: Original strand, 12231 - 12321
Alignment:
Q  219 gcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctcatt 309  Q
    |||| ||||||| ||||| ||||||||||||||||| |  ||||| || ||||||| ||||||||  ||||| |||| || | ||||||||    
T  12231 gcaaaagtagatattgagcaacatataagtgagatgtccaatatacctgatgtcttaagattttgaatgaagatgtggtggcaatctcatt 12321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 261
Target Start/End: Original strand, 2229 - 2376
Alignment:
Q  117 aagcggaagtggttcgtggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattga 216  Q
    |||||| |||| ||| ||||| |||||| || |||| ||||| ||    ||||||||||| ||||||||||||||||||| |||||||||  |||||||     
T  2229 aagcgggagtgattcttggtgttggatcacacacacggagagccttgaccttaatgaagatatgttaatgtgtcaagtgtaagttaaaattccacattgg 2328  T
Q  217 atgc---aatagtagatgttgagaaacatataagtgagatgactcata 261  Q
    ||||   | || ||||||||||| |||||| || |||||||| |||||    
T  2329 atgcaggagtaatagatgttgagcaacatacaaatgagatgattcata 2376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 274
Target Start/End: Complemental strand, 12654 - 12535
Alignment:
Q  157 agtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaat--aacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||| |   | |||||  |||||| |||| || ||||| ||||| |||||||||||    
T  12654 agtctcacacttaaggaagagatgttaatgtgtcatgtgtgagttaaatttctatacattagatgcaagagtaaatattgagcaacatgtaagtgagatg 12555  T
Q  255 actcatatatctaatgtctt 274  Q
    |   |||||||| |||||||    
T  12554 atcaatatatcttatgtctt 12535  T

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Target: scaffold0268 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 300
Target Start/End: Complemental strand, 19976 - 19811
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  ||||||||||| ||||| | | ||| |||||||||||||||||| || ||||| |  ||||||| ||| || ||||||| |    
T  19976 tggtggtagatctcatatgcagagagtctcgtacttgagggagaaatgttaatgtgtcaagtgcgaattaaagt--cacattggatgtaagagtagatat 19879  T
Q  233 tgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtc 300  Q
    |||| ||||||||||||  ||||  |||||| ||||| || | || ||| |||||||| |||| ||||    
T  19878 tgagtaacatataagtgttatgatccatatacctaatttcataaggtttggggtgaagatgtgttgtc 19811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 29268 - 29168
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatg 254  Q
    ||||||||| | |||| | ||| |||||||||| |||| ||||||||||| |  ||||||| |||||| |||||||||| |  |||||||||||||||||    
T  29268 agagtctcacagttaagggagatatgttaatgtatcaaatgtgagttaaagttccacattggatgcaaaagtagatgttaaacaacatataagtgagatg 29169  T
Q  255 a 255  Q
    |    
T  29168 a 29168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 289
Target Start/End: Original strand, 12571 - 12687
Alignment:
Q  173 aagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtc 272  Q
    ||||||||||||||| | |||| ||||||||| | | |||||| ||| ||||||| || ||||  ||||||||||||||||||| | |||| || ||  |    
T  12571 aagagatgttaatgtatgaagtttgagttaaagttatacattggatggaatagtatattttgaacaacatataagtgagatgacacgtatacctgatacc 12670  T
Q  273 ttgagattttgggtgaa 289  Q
    || ||||||||||||||    
T  12671 ttaagattttgggtgaa 12687  T

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Target: scaffold0284 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 309
Target Start/End: Complemental strand, 7668 - 7537
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgag 277  Q
    ||||||||||||||| || |||||||  | | |||||| ||| || ||||||| ||||| ||||||||||| |||||||  | ||| |||||||||| ||    
T  7668 atgttaatgtgtcaaatgcgagttaacgttatacattggatggaagagtagattttgagcaacatataagttagatgaccaaaatacctaatgtcttaag 7569  T
Q  278 attttgggtgaagttgtgatgtccatctcatt 309  Q
     |||   ||||||||||| |||| ||||||||    
T  7568 gtttcatgtgaagttgtggtgtcaatctcatt 7537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 6506 - 6410
Alignment:
Q  174 agagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatg 270  Q
    |||| ||||||||| |||| ||||||||||| |  || |||| |||||| | ||||||||||  |||||||||||||||||||  ||||| ||||||    
T  6506 agaggtgttaatgtatcaaatgtgagttaaagttccatattggatgcaaaaatagatgttgaacaacatataagtgagatgaccaatatacctaatg 6410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 149 - 263
Target Start/End: Original strand, 37016 - 37130
Alignment:
Q  149 acacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagt 248  Q
    |||||||||||  || |||| |  ||||||||||||||||||||||||||||||||||   | | || ||  || ||||||| ||||  |||||||||||    
T  37016 acacagagagttgcaaacttgaataagagatgttaatgtgtcaagtgtgagttaaaattctatagtggatagaagagtagattttgaataacatataagt 37115  T
Q  249 gagatgactcatata 263  Q
    ||||||| |||||||    
T  37116 gagatgattcatata 37130  T

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Target: scaffold0114; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 1376 - 1464
Alignment:
Q  181 ttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaat 269  Q
    |||||||||||||||||||| ||  |   |||||||||| || | ||||| ||||  || |||||||||||||||| |||||| |||||    
T  1376 ttaatgtgtcaagtgtgagtgaatgttcaacattgaatggaagaatagattttgaataatatataagtgagatgacccatatacctaat 1464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1743 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1743
Description:

Target: scaffold1743; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 307
Target Start/End: Complemental strand, 316 - 188
Alignment:
Q  178 atgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgag 277  Q
    ||||||||||||||||||||||||||  |  | |||||  ||||| ||||  ||||||  |||| |||||||| ||||||||||||||||||||||| ||    
T  316 atgttaatgtgtcaagtgtgagttaag-tctcgcattggctgcaagagtaactgttgaacaacaaataagtgatatgactcatatatctaatgtcttaag 218  T
Q  278 attttgggtgaagttgtgatgtccatctca 307  Q
     ||| || || || |||| |||| ||||||    
T  217 gtttaggatggagatgtggtgtcaatctca 188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1315 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1315
Description:

Target: scaffold1315; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 307
Target Start/End: Original strand, 563 - 652
Alignment:
Q  217 atgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||||| ||||||||||||||||||||| || ||||| | ||||||| ||||||||||  || ||||||||||   |||||||| ||||||    
T  563 atgcaagagtagatgttgagaaacatatgagggagatta-tcatatacctaatgtcttaggactttgggtgaaaaagtgatgtcgatctca 652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1293 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1293
Description:

Target: scaffold1293; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 1508 - 1419
Alignment:
Q  217 atgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||||| ||||||||||||||||||||| || ||||| | ||||||| ||||||||||  || ||||||||||   |||||||| ||||||    
T  1508 atgcaagagtagatgttgagaaacatatgagggagatta-tcatatacctaatgtcttaggactttgggtgaaaaagtgatgtcgatctca 1419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 307
Target Start/End: Original strand, 31029 - 31169
Alignment:
Q  166 cttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatc 265  Q
    ||||||| |||||| ||||| |||||   ||||||||||||   |||||  |||||| ||||||||||||||||||||| || ||||| |  |||||| |    
T  31029 cttaatggagagatattaatttgtcagtcgtgagttaaaatttgacattagatgcaagagtagatgttgagaaacatatgag-gagattatccatatacc 31127  T
Q  266 taatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||||  ||  || |||||||||||  |||||||| ||||||    
T  31128 taatgctttaggactttgggtgaagaagtgatgtcgatctca 31169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 128389 - 128292
Alignment:
Q  156 gagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagat 253  Q
    |||||||| | |||| ||| | ||||| |||||||| ||||||||||||||  || ||||  |||| ||||| || ||||| ||||||||||||||||    
T  128389 gagtctcacatttaaggaatatatgtttatgtgtcatgtgtgagttaaaattccatattggctgcagtagtatatattgagtaacatataagtgagat 128292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 127679 - 127586
Alignment:
Q  181 ttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtctt 274  Q
    |||||||||||| ||||| ||||| |   |||||| |||  | |||||||||| |||||||||||||| |||||||  ||| | ||||||||||    
T  127679 ttaatgtgtcaattgtgacttaaagttctacattggatgataaagtagatgtttagaaacatataagtaagatgaccaatacacctaatgtctt 127586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 45670 - 45618
Alignment:
Q  238 aacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaag 290  Q
    ||||||||| |||||||||  ||||| |||||||||| |||||||||||||||    
T  45670 aacatataaatgagatgacaaatatacctaatgtcttaagattttgggtgaag 45618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 44959 - 44876
Alignment:
Q  224 agtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||||||||||||||| |||||||||||||||   ||||| |||||| |||  | |||| ||||||| |||| |||| ||||||    
T  44959 agtagatgttgagaaatatataagtgagatgaacaatatacctaatgccttatggtttttggtgaagatgtggtgtcaatctca 44876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 153117 - 153169
Alignment:
Q  238 aacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaag 290  Q
    ||||||||| |||||||||  ||||| |||||||||| |||||||||||||||    
T  153117 aacatataaatgagatgacaaatatacctaatgtcttaagattttgggtgaag 153169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 307
Target Start/End: Original strand, 153828 - 153911
Alignment:
Q  224 agtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagattttgggtgaagttgtgatgtccatctca 307  Q
    |||||||||||||||| |||||||||||||||   ||||| |||||| |||  | |||| ||||||| |||| |||| ||||||    
T  153828 agtagatgttgagaaatatataagtgagatgaacaatatacctaatgccttatggtttttggtgaagatgtggtgtcaatctca 153911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1737 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold1737
Description:

Target: scaffold1737; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 282
Target Start/End: Original strand, 125 - 220
Alignment:
Q  185 tgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatctaatgtcttgagatttt 282  Q
    |||||||||||||||| |||||  ||||||  |||||| |||| || ||||||||||||| |||||| ||   | ||||||||||||||| |||||||    
T  125 tgtgtcaagtgtgagtaaaaatttcacattatatgcaagagta-atattgagaaacatat-agtgaggtggtccgtatatctaatgtcttaagatttt 220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1737; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 510 - 562
Alignment:
Q  152 cagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    |||||||| |||  ||||| | ||||||||||||||||||| |||||||||||    
T  510 cagagagtttcacgcttaagggagagatgttaatgtgtcaaatgtgagttaaa 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 19989 - 19948
Alignment:
Q  214 tgaatgcaatagtagatgttgagaaacatataagtgagatga 255  Q
    ||||||||| |||| ||||| |||||||||||||||||||||    
T  19989 tgaatgcaaaagtaaatgttaagaaacatataagtgagatga 19948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 249
Target Start/End: Original strand, 40553 - 40667
Alignment:
Q  133 tggtggtggatcgcatacacagagagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgt 232  Q
    ||||||| |||| ||||  | ||||||||| ||||| | | ||| ||||||| ||||||| ||||||||||| |  ||||||| ||| || | |||||||    
T  40553 tggtggtagatctcatatgcggagagtctcgtacttgagggagaaatgttaacgtgtcaaatgtgagttaaagt--cacattggatgtaagaatagatgt 40650  T
Q  233 tgagaaacatataagtg 249  Q
    |||| || |||||||||    
T  40651 tgagtaagatataagtg 40667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 50446 - 50495
Alignment:
Q  155 agagtctcatacttaatgaagagatgttaatgtgtcaagtgtgagttaaa 204  Q
    ||||||| | |||||||| |||||||| ||||||||||||| ||||||||    
T  50446 agagtctgaaacttaatgtagagatgtcaatgtgtcaagtgcgagttaaa 50495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 22806 - 22749
Alignment:
Q  11 ttctcacttgtgtgattactctttctgcaatgtgtcgtcattcacacaagtgttggctcc 70  Q
    ||||||||||| |||||||||||||| |||||| |||  |||||||| | ||||||||||    
T  22806 ttctcacttgtttgattactctttctccaatgtatcg--attcacaccactgttggctcc 22749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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