View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7771_low_14 (Length: 309)
Name: NF7771_low_14
Description: NF7771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7771_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 12 - 291
Target Start/End: Original strand, 15569241 - 15569520
Alignment:
| Q |
12 |
aacctgtgaaagcaaattgaaaaaagaagaatgatctttttacacgtaatgccatgaagagatctaaatatgaatcccctaaaagtccctttaaaattta |
111 |
Q |
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| T |
15569241 |
aacctgtaaaagcaaattgaaaaaagaagaatgatctttttacacgtaatgccatgaagagatctaaatatgaatcccttaaaagtccctttaaaattta |
15569340 |
T |
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| Q |
112 |
aagaaaaaatggtaatttcacatgccatgaacaatagtgactactactacgtagtaggtttaggttttgttagtcattttgggttcgaactcctactacg |
211 |
Q |
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| T |
15569341 |
aagaaaaaatggtaatttcacatgccatgaacaatagtgactactactacgtagtaggtttaggttttgttagtcattttgggttcgaactcctactacg |
15569440 |
T |
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| Q |
212 |
taagaagagacactttgttcaacaaattctttaaagtgccacaaaatcagaaccttacgtcaatcaaattatgtagtaga |
291 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15569441 |
taagaagagacactttgttcaacaaattctttaaagtgccacaaaatcagaaccttacgtcaatcaaattatgtagtaga |
15569520 |
T |
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