View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7771_low_17 (Length: 247)
Name: NF7771_low_17
Description: NF7771
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7771_low_17 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 42069538 - 42069772
Alignment:
| Q |
12 |
tatcaattaagcaagaaaaagacactttttgcatgtggttgattgataaacctaactgcccttgctagggatcttggaatttctataaaataatgannnn |
111 |
Q |
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| T |
42069538 |
tatcaattaagcaagaaaaagacactttttgcatgtggttgattgataaacctaactgcccttgctagggatcttggaatttctataaaataatgatttt |
42069637 |
T |
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| Q |
112 |
nnnnatataaattaaagttgtggtcacatgtctctctacctacgaattcattacacaattctattgtcctgcgtggaattccatttcaaattatatatat |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
42069638 |
ttg-atataaattaaagttgtggtcacatgtctctctacctacgaattcattacacaattctattgtcctgcgtggaattccatttccaattatatatat |
42069736 |
T |
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| Q |
212 |
aaaaggataccatgctccaagaaaaatattgttctc |
247 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
42069737 |
aaaaggataccatgctccaagaaaaatattgttctc |
42069772 |
T |
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