View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7772_low_6 (Length: 242)

Name: NF7772_low_6
Description: NF7772
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7772_low_6
NF7772_low_6
[»] chr8 (6 HSPs)
chr8 (17-121)||(12756161-12756267)
chr8 (17-121)||(24052033-24052139)
chr8 (17-105)||(41043533-41043621)
chr8 (175-242)||(41043693-41043760)
chr8 (19-105)||(41048908-41048994)
chr8 (61-91)||(24042894-24042924)
[»] chr5 (10 HSPs)
chr5 (17-121)||(28366980-28367086)
chr5 (17-121)||(28375720-28375826)
chr5 (13-121)||(1536554-1536664)
chr5 (17-121)||(30963173-30963277)
chr5 (17-121)||(30927382-30927486)
chr5 (25-121)||(34647933-34648031)
chr5 (175-242)||(1536440-1536508)
chr5 (175-242)||(28375573-28375643)
chr5 (51-121)||(14663997-14664064)
chr5 (175-242)||(30963020-30963090)
[»] chr3 (24 HSPs)
chr3 (17-121)||(40800637-40800743)
chr3 (8-121)||(3112125-3112240)
chr3 (17-121)||(2174217-2174323)
chr3 (17-121)||(3110508-3110614)
chr3 (17-121)||(13990886-13990992)
chr3 (17-121)||(23338883-23338989)
chr3 (17-121)||(23344430-23344536)
chr3 (17-121)||(2168650-2168756)
chr3 (17-121)||(9730312-9730418)
chr3 (13-121)||(13980655-13980765)
chr3 (17-121)||(13985314-13985420)
chr3 (17-121)||(40802561-40802667)
chr3 (21-121)||(48216335-48216437)
chr3 (13-120)||(13991988-13992097)
chr3 (175-238)||(13991882-13991945)
chr3 (18-98)||(34578841-34578921)
chr3 (17-76)||(9724670-9724728)
chr3 (175-242)||(2174064-2174134)
chr3 (175-242)||(9730179-9730249)
chr3 (175-242)||(13985503-13985573)
chr3 (175-242)||(23339066-23339136)
chr3 (175-242)||(40802434-40802504)
chr3 (175-242)||(48216188-48216258)
chr3 (55-91)||(19307751-19307787)
[»] chr2 (24 HSPs)
chr2 (17-121)||(630785-630891)
chr2 (17-121)||(636336-636442)
chr2 (17-121)||(7909962-7910068)
chr2 (17-121)||(7917417-7917523)
chr2 (17-121)||(22430402-22430508)
chr2 (17-121)||(22435996-22436102)
chr2 (17-121)||(43777045-43777151)
chr2 (17-121)||(22425032-22425138)
chr2 (13-121)||(26694203-26694313)
chr2 (34-121)||(14893301-14893390)
chr2 (7-121)||(43771509-43771623)
chr2 (32-121)||(26702318-26702409)
chr2 (17-121)||(14898837-14898943)
chr2 (9-121)||(1519188-1519306)
chr2 (13-98)||(1525692-1525783)
chr2 (175-242)||(1519363-1519430)
chr2 (175-242)||(26694355-26694422)
chr2 (175-242)||(630974-631044)
chr2 (175-242)||(7917264-7917334)
chr2 (175-242)||(14893473-14893543)
chr2 (175-242)||(22430591-22430661)
chr2 (175-242)||(43771685-43771755)
chr2 (175-242)||(22425201-22425271)
chr2 (55-97)||(19052368-19052411)
[»] chr1 (17 HSPs)
chr1 (17-121)||(27178969-27179075)
chr1 (17-121)||(27194970-27195076)
chr1 (17-121)||(15716678-15716784)
chr1 (17-121)||(26711476-26711582)
chr1 (19-121)||(33498418-33498522)
chr1 (17-121)||(15711097-15711203)
chr1 (17-91)||(33492968-33493042)
chr1 (47-121)||(17721823-17721899)
chr1 (50-116)||(16498728-16498796)
chr1 (11-100)||(3343895-3343988)
chr1 (175-242)||(15711281-15711351)
chr1 (175-221)||(26711373-26711419)
chr1 (47-102)||(9088672-9088727)
chr1 (175-221)||(33498309-33498355)
chr1 (202-242)||(52871461-52871501)
chr1 (177-224)||(9088823-9088870)
chr1 (11-60)||(16498808-16498856)
[»] chr7 (20 HSPs)
chr7 (13-105)||(42167638-42167730)
chr7 (17-121)||(16648477-16648583)
chr7 (17-121)||(17622838-17622944)
chr7 (13-121)||(557871-557981)
chr7 (13-121)||(576054-576164)
chr7 (17-121)||(32148531-32148637)
chr7 (17-100)||(42208947-42209030)
chr7 (13-121)||(44655649-44655759)
chr7 (39-118)||(25499152-25499233)
chr7 (39-118)||(25493915-25493996)
chr7 (175-242)||(42167499-42167566)
chr7 (175-242)||(44655813-44655880)
chr7 (175-238)||(25494062-25494125)
chr7 (11-96)||(26456872-26456957)
chr7 (13-121)||(38011688-38011794)
chr7 (175-242)||(32143368-32143438)
chr7 (175-242)||(575901-575971)
chr7 (175-242)||(9018595-9018660)
chr7 (51-93)||(11726511-11726553)
chr7 (52-96)||(11726398-11726442)
[»] scaffold0004 (3 HSPs)
scaffold0004 (17-121)||(350991-351097)
scaffold0004 (17-121)||(345670-345776)
scaffold0004 (175-221)||(350882-350928)
[»] chr4 (9 HSPs)
chr4 (17-121)||(6156605-6156711)
chr4 (13-121)||(53982145-53982254)
chr4 (17-121)||(6162302-6162408)
chr4 (17-121)||(20192591-20192697)
chr4 (17-121)||(20197955-20198061)
chr4 (175-242)||(6156774-6156844)
chr4 (175-242)||(20197802-20197872)
chr4 (58-97)||(12733943-12733982)
chr4 (180-230)||(12733810-12733860)
[»] chr6 (6 HSPs)
chr6 (17-121)||(14855991-14856097)
chr6 (13-121)||(26680621-26680730)
chr6 (17-121)||(14847133-14847239)
chr6 (175-242)||(26680784-26680851)
chr6 (177-242)||(6925000-6925068)
chr6 (175-242)||(14847302-14847372)
[»] scaffold0169 (3 HSPs)
scaffold0169 (13-121)||(11008-11118)
scaffold0169 (13-118)||(8746-8853)
scaffold0169 (175-242)||(11172-11239)
[»] scaffold0211 (1 HSPs)
scaffold0211 (17-121)||(26958-27064)
[»] scaffold0121 (2 HSPs)
scaffold0121 (39-121)||(11425-11509)
scaffold0121 (175-242)||(11295-11362)
[»] scaffold0124 (1 HSPs)
scaffold0124 (39-121)||(39540-39624)
[»] scaffold1317 (1 HSPs)
scaffold1317 (175-238)||(1912-1975)


Alignment Details
Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 12756267 - 12756161
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  12756267 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 12756168  T
Q  115 tataatc 121  Q
    |||||||    
T  12756167 tataatc 12756161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 24052139 - 24052033
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  24052139 tgttagtttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 24052040  T
Q  115 tataatc 121  Q
    |||||||    
T  24052039 tataatc 24052033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 41043533 - 41043621
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatca 105  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41043533 tgttagcttattgggctttattgtgcttactccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatca 41043621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 41043693 - 41043760
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41043693 aatagtttcataacacgttatcagcacgagcttaccaactgaggtatgcaattcttcttaatctattt 41043760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 105
Target Start/End: Original strand, 41048908 - 41048994
Alignment:
Q  19 ttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatca 105  Q
    |||||||||| || |||||| || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  41048908 ttagcttattgggtcttattatgtttgctccccaagtcattgtatttatttataaatagagctcatatgtaacctaattatacatca 41048994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 91
Target Start/End: Complemental strand, 24042924 - 24042894
Alignment:
Q  61 tatttctctataaatagagctcatatgtaac 91  Q
    |||||||||||||||||||||||||||||||    
T  24042924 tatttctctataaatagagctcatatgtaac 24042894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 28367086 - 28366980
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  28367086 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 28366987  T
Q  115 tataatc 121  Q
    |||||||    
T  28366986 tataatc 28366980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 28375826 - 28375720
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  28375826 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 28375727  T
Q  115 tataatc 121  Q
    |||||||    
T  28375726 tataatc 28375720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 1536664 - 1536554
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagaga 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||  |||||||    
T  1536664 atactgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattagagataccaagaga 1536565  T
Q  111 ataatataatc 121  Q
    |||||||||||    
T  1536564 ataatataatc 1536554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 30963277 - 30963173
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||  |||||||||||    
T  30963277 tgttagcttattggaccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcata--taacttaattatacatcacaagagaataa 30963180  T
Q  115 tataatc 121  Q
    |||||||    
T  30963179 tataatc 30963173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 30927486 - 30927382
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||  ||| |||||||    
T  30927486 tgttagcttattggaccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcata--taacttaattatacatcacaaaagaataa 30927389  T
Q  115 tataatc 121  Q
    |||||||    
T  30927388 tataatc 30927382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 34648031 - 34647933
Alignment:
Q  25 tattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataatataatc 121  Q
    ||||||||  ||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||| |||||  ||||||||||||| ||||    
T  34648031 tattaggctatattgtgcttgctccccaaatcattgtatttctgtataaattgagctcatatgtaacctaattgtacatcacaagagaataatagaatc 34647933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 1536508 - 1536440
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactg-aggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||    
T  1536508 aatagtttcataacacgttatcagtacgagcttaccaactgaaggtatgcaattcttcttaatctattt 1536440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 28375643 - 28375573
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  28375643 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 28375573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 14664064 - 14663997
Alignment:
Q  51 caagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataatataatc 121  Q
    |||||||||||||||||||||||||||||||||     |||||||||| | ||  ||||||||||||||||||    
T  14664064 caagtcattgtatttctctataaatagagctca-----aacctaattagagataccaagagaataatataatc 14663997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 30963090 - 30963020
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||| ||||||||||||| |||||||   || ||||  ||||||||| ||||||| |||||||||||    
T  30963090 aatagttttataacacgttatcagcacgagactctaaccatttgaggtatgtaattctttttaatctattt 30963020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 40800743 - 40800637
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  40800743 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacataacaagagaataa 40800644  T
Q  115 tataatc 121  Q
    |||||||    
T  40800643 tataatc 40800637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 3112240 - 3112125
Alignment:
Q  8 agattatactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--ca 105  Q
    |||| ||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||    
T  3112240 agatcatattgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcaca 3112141  T
Q  106 agagaataatataatc 121  Q
    ||||||||||||||||    
T  3112140 agagaataatataatc 3112125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 2174323 - 2174217
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  2174323 tgttagcttattgggccatattgtgtttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 2174224  T
Q  115 tataatc 121  Q
    |||||||    
T  2174223 tataatc 2174217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 3110614 - 3110508
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||    
T  3110614 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataa 3110515  T
Q  115 tataatc 121  Q
    |||||||    
T  3110514 tataatc 3110508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 13990886 - 13990992
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  13990886 tgttagcttattgggccatattgtgtttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 13990985  T
Q  115 tataatc 121  Q
    |||||||    
T  13990986 tataatc 13990992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 23338883 - 23338989
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  23338883 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatagatcacaagagaataa 23338982  T
Q  115 tataatc 121  Q
    |||||||    
T  23338983 tataatc 23338989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 23344430 - 23344536
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  23344430 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatagatcacaagagaataa 23344529  T
Q  115 tataatc 121  Q
    |||||||    
T  23344530 tataatc 23344536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 2168756 - 2168650
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  2168756 tgttagcttattgggccatattgtgtttgctccccaagtcattgtatttctctataaatagagctcatatgtagcctaattatacatcacaagagaataa 2168657  T
Q  115 tataatc 121  Q
    |||||||    
T  2168656 tataatc 2168650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 9730418 - 9730312
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||    
T  9730418 tgttagcttattgggccatattgtgcttgctccccaaatcattgtatttctctataaatagagctcatatgtaatctaattatacatgacaagagaataa 9730319  T
Q  115 tataatc 121  Q
    |||||||    
T  9730318 tataatc 9730312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 13980765 - 13980655
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagaga 110  Q
    ||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||  |||||||    
T  13980765 atactattagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaatctaattgtacataccaagaga 13980666  T
Q  111 ataatataatc 121  Q
    |||||||||||    
T  13980665 ataatataatc 13980655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 13985314 - 13985420
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||    
T  13985314 tgttagcttattgggccatattgtgtttgctccccaagtcattgtatttctctataaatagagatcatatgtaacctaattatacatcacaagagaataa 13985413  T
Q  115 tataatc 121  Q
    |||||||    
T  13985414 tataatc 13985420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 40802667 - 40802561
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||    
T  40802667 tgttagcttattgggcgatattgtgcttgcttcccaagtcattgtatttctctataaatagagctcatatgtaacttaattatacatcacaagagaataa 40802568  T
Q  115 tataatc 121  Q
    |||||||    
T  40802567 tataatc 40802561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 48216437 - 48216335
Alignment:
Q  21 agcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataatata 118  Q
    |||||||| |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  48216437 agcttattgggccatattttggttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatatatcacaagagaataatata 48216338  T
Q  119 atc 121  Q
    |||    
T  48216337 atc 48216335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 13992097 - 13991988
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatac--atcaagaga 110  Q
    ||||| |||||||||| || | ||||||||||||||  ||||||||||| ||| | ||||||||||||||||||| |||||||||||||  |||||||||    
T  13992097 atactattagcttattgggtcatattgtgcttgctcttcaagtcattgtgtttatgtataaatagagctcatatgcaacctaattatacatatcaagaga 13991998  T
Q  111 ataatataat 120  Q
    ||||||||||    
T  13991997 ataatataat 13991988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 13991945 - 13991882
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattcttcttaatct 238  Q
    |||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  13991945 aatagtttcataacacgttatcagcacgaccttatcaactgaggtatgcaattcttcttaatct 13991882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 34578921 - 34578841
Alignment:
Q  18 gttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaatta 98  Q
    ||||||||||| |  | |||||| |||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34578921 gttagcttattggatcatattgtacttattccccaagtcattgtatttctctataaatagagcttatatgtaacctaatta 34578841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 9724728 - 9724670
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaata 76  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||    
T  9724728 tgttagcttttt-ggccatattgtgcttgctccccaagtcattgtatttctctataaata 9724670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 2174134 - 2174064
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  2174134 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 2174064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 9730249 - 9730179
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  9730249 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 9730179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 13985503 - 13985573
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  13985503 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 13985573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 23339066 - 23339136
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  23339066 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 23339136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 40802504 - 40802434
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  40802504 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 40802434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 48216258 - 48216188
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  48216258 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 48216188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 91
Target Start/End: Complemental strand, 19307787 - 19307751
Alignment:
Q  55 tcattgtatttctctataaatagagctcatatgtaac 91  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  19307787 tcattgtatttctctataaatagagatcacatgtaac 19307751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 630785 - 630891
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  630785 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 630884  T
Q  115 tataatc 121  Q
    |||||||    
T  630885 tataatc 630891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 636336 - 636442
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  636336 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 636435  T
Q  115 tataatc 121  Q
    |||||||    
T  636436 tataatc 636442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 7910068 - 7909962
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  7910068 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 7909969  T
Q  115 tataatc 121  Q
    |||||||    
T  7909968 tataatc 7909962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 7917523 - 7917417
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  7917523 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 7917424  T
Q  115 tataatc 121  Q
    |||||||    
T  7917423 tataatc 7917417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 22430402 - 22430508
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22430402 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 22430501  T
Q  115 tataatc 121  Q
    |||||||    
T  22430502 tataatc 22430508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 22435996 - 22436102
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22435996 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 22436095  T
Q  115 tataatc 121  Q
    |||||||    
T  22436096 tataatc 22436102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 43777045 - 43777151
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  43777045 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 43777144  T
Q  115 tataatc 121  Q
    |||||||    
T  43777145 tataatc 43777151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 22425032 - 22425138
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||    
T  22425032 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacccaattatacatcacaagagaataa 22425131  T
Q  115 tataatc 121  Q
    |||||||    
T  22425132 tataatc 22425138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 26694203 - 26694313
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagaga 110  Q
    |||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  26694203 atactgttagtttattgaaccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagaga 26694302  T
Q  111 ataatataatc 121  Q
    |||| ||||||    
T  26694303 ataacataatc 26694313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 34 - 121
Target Start/End: Original strand, 14893301 - 14893390
Alignment:
Q  34 ttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataatataatc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  14893301 ttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataatataatc 14893390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 43771509 - 43771623
Alignment:
Q  7 tagattatactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--c 104  Q
    ||||| ||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |    
T  43771509 tagatcatattgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcata--taacctaattatacatcac 43771606  T
Q  105 aagagaataatataatc 121  Q
    |||||||||||||||||    
T  43771607 aagagaataatataatc 43771623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 26702318 - 26702409
Alignment:
Q  32 ccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataatataatc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  26702318 ccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataacataatc 26702409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 14898837 - 14898943
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| | || |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  14898837 tgttagcttattggaccatattgtgcttgctccctaaatcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 14898936  T
Q  115 tataatc 121  Q
    |||||||    
T  14898937 tataatc 14898943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 1519188 - 1519306
Alignment:
Q  9 gattatactgttagcttattaggccttattgtgcttgctccccaagtcat----tgtatttctctataaatagagctcatatgtaacctaattatacat- 103  Q
    ||||||| |||||||||||| || | ||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||| | ||     
T  1519188 gattatattgttagcttattgggtcatattgtgcttgctccccaagtcattcattgtatttctctataaatagagctcatatgtaacctaattagagata 1519287  T
Q  104 -caagagaataatataatc 121  Q
     ||||||||||||||||||    
T  1519288 ccaagagaataatataatc 1519306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 1525692 - 1525783
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctc------tataaatagagctcatatgtaacctaatta 98  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||    
T  1525692 atactgttagcttattaggtcatattgtgcttgctccccaagtcattgtatttctctataaatataaatagagctcatatgtaacctaatta 1525783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 1519363 - 1519430
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1519363 aatagtttcgtaacacgttatcagcacgagcttaccaactgaggtatgcaattcttcttaatctattt 1519430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 26694355 - 26694422
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||    
T  26694355 aatagtttcataacacgttatcagcacaagtttaccaactgaggtatgcaattcttcttaatctattt 26694422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 630974 - 631044
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  630974 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 631044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 7917334 - 7917264
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  7917334 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 7917264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 14893473 - 14893543
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  14893473 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 14893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 22430591 - 22430661
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  22430591 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 22430661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 43771685 - 43771755
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  43771685 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 43771755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 22425201 - 22425271
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    ||||||||||||||| |||||| |||||||   || ||||||||||||||  ||||||| |||||||||||    
T  22425201 aatagtttcataacatgttatcagcacgagactctaaccaactgaggtatataattctttttaatctattt 22425271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 19052411 - 19052368
Alignment:
Q  55 tcattgtatttctctataaatagagctcata-tgtaacctaatt 97  Q
    ||||||||||||||||||||||||||||||| | ||||||||||    
T  19052411 tcattgtatttctctataaatagagctcatactataacctaatt 19052368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 27179075 - 27178969
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  27179075 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 27178976  T
Q  115 tataatc 121  Q
    |||||||    
T  27178975 tataatc 27178969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 27195076 - 27194970
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  27195076 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 27194977  T
Q  115 tataatc 121  Q
    |||||||    
T  27194976 tataatc 27194970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 15716678 - 15716784
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||    
T  15716678 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacgtaattatacatcacaagagaataa 15716777  T
Q  115 tataatc 121  Q
    |||||||    
T  15716778 tataatc 15716784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 26711582 - 26711476
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||    
T  26711582 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattagacatcacaagagaataa 26711483  T
Q  115 tataatc 121  Q
    |||||||    
T  26711482 tataatc 26711476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 33498522 - 33498418
Alignment:
Q  19 ttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataata 116  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||  |||||||||||||    
T  33498522 ttagcttattgggctatattgtgcttgctccccaagtcattgtatttctctataaatggagcttatatgtaacctaattatacatcacaagagaataata 33498423  T
Q  117 taatc 121  Q
    |||||    
T  33498422 taatc 33498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 15711097 - 15711203
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||| ||||| | || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||  |||||||||||    
T  15711097 tgttagtttattggaccatattgtgcttgctccccaagtcattgtatttctttataaatagagctcatatgtaacgtaattatacatcacaagagaataa 15711196  T
Q  115 tataatc 121  Q
    |||||||    
T  15711197 tataatc 15711203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 33493042 - 33492968
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaac 91  Q
    |||||||||||| |||  |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  33493042 tgttagcttattgggctatattgtgcttgctccctaagtcattgtatttctctataaatagagcttatatgtaac 33492968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 17721823 - 17721899
Alignment:
Q  47 tccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataatataatc 121  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||  ||||||||||||||||||    
T  17721823 tccccaagtcattatatttctctataaatagagctcgtatgtaacctaattgtacatcacaagagaataatataatc 17721899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 16498796 - 16498728
Alignment:
Q  50 ccaagtcattgtatttctctataaatagagctcatatgtaacctaatt--atacatcaagagaataata 116  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||  ||||  |||||||||||||    
T  16498796 ccaagtcattgtatctctctataaatagagctcatatgtaacctaattgcataccacaagagaataata 16498728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 3343988 - 3343895
Alignment:
Q  11 ttatactgttagcttattaggccttattgtgcttgctccc----caagtcattgtatttctctataaatagagctcatatgtaacctaattata 100  Q
    ||||||| |||||||||| || | ||||||||||||| ||    ||||||||||||||||| |||||||||| || ||||||||||||||||||    
T  3343988 ttatactattagcttattgggtcatattgtgcttgcttccttcccaagtcattgtatttctatataaatagaacttatatgtaacctaattata 3343895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 15711281 - 15711351
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  15711281 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 15711351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 26711419 - 26711373
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtat 221  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  26711419 aatagtttcataacacgttatcagcacgagcttaccaactaaggtat 26711373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 9088672 - 9088727
Alignment:
Q  47 tccccaagtcattgtatttctctataaatagagctcatatgtaacctaattataca 102  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||| |||||| ||||    
T  9088672 tccccaaatcattatatttctctataaatagagcttatatgtaatctaattgtaca 9088727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 33498355 - 33498309
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtat 221  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  33498355 aatagtttcataacacgctatcagcacgagcttaccaactaaggtat 33498309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 52871461 - 52871501
Alignment:
Q  202 gagcttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  52871461 gagcttaccaattgagatatgcaattcttcttaatctattt 52871501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 9088823 - 9088870
Alignment:
Q  177 tagtttcataacacgttatcggcacgagcttaccaactgaggtatgca 224  Q
    |||||| ||||||||||||| ||| ||| |||||||||||||||||||    
T  9088823 tagttttataacacgttatcagcaagagtttaccaactgaggtatgca 9088870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 16498856 - 16498808
Alignment:
Q  11 ttatactgttagcttattaggccttattgtgcttgctccccaagtcattg 60  Q
    ||||||| |||||||||| |||| ||||||||||||| ||||||||||||    
T  16498856 ttatactattagcttattgggccatattgtgcttgct-cccaagtcattg 16498808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 105
Target Start/End: Complemental strand, 42167730 - 42167638
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatca 105  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42167730 atactgttagtttattgggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatca 42167638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 16648477 - 16648583
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||    
T  16648477 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaaaaa 16648576  T
Q  115 tataatc 121  Q
    |||||||    
T  16648577 tataatc 16648583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 17622838 - 17622944
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||    
T  17622838 tgttagcttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaaaaa 17622937  T
Q  115 tataatc 121  Q
    |||||||    
T  17622938 tataatc 17622944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 557981 - 557871
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagaga 110  Q
    ||||| |||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||  |||||||    
T  557981 atactattagcttattgggccatattgtgcttgcttcccaagtcattgtatttctctataaatagagttcatatgtaacctaattgtacatcacaagaga 557882  T
Q  111 ataatataatc 121  Q
    |||||||||||    
T  557881 ataatataatc 557871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 576164 - 576054
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagaga 110  Q
    ||||| |||||||||| |||| ||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||  |||||||    
T  576164 atactattagcttattgggccatattgtgattgcttcccaagtcattgtatttctctataaatagagttcatatgtaacctaattgtacatcacaagaga 576065  T
Q  111 ataatataatc 121  Q
    |||||||||||    
T  576064 ataatataatc 576054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 32148531 - 32148637
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||| ||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||| |||||    
T  32148531 tgttagtttattgggccatattgtgcttgctcccaaagtcattgtatttctctataaatagagcttatatgtaacctaattatacatcacaagaaaataa 32148630  T
Q  115 tataatc 121  Q
    |||||||    
T  32148631 tataatc 32148637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 42208947 - 42209030
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattata 100  Q
    |||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42208947 tgttagcttattggaccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattata 42209030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 44655649 - 44655759
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagaga 110  Q
    |||||||||||||||| || ||| ||||||||||| |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||  |||||||    
T  44655649 atactgttagcttattgggtcttgttgtgcttgctacccaagtctttgtatttctctataaattaagctcatatgtaacctaattatacatcacaagaga 44655748  T
Q  111 ataatataatc 121  Q
    |||||||||||    
T  44655749 ataatataatc 44655759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 25499152 - 25499233
Alignment:
Q  39 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataatata 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  25499152 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaatgatacatcacaagagaataatata 25499233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 25493915 - 25493996
Alignment:
Q  39 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataatata 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||  |||||||||||||||    
T  25493915 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacataatgatacatcacaagagaataatata 25493996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 42167566 - 42167499
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  42167566 aatagtttcataacacgttatcagcacaagcttaccaactgaggtatgcaattcttcttaatctattt 42167499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 44655813 - 44655880
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  44655813 aatagtttcataacacgttatcagcacgagcttaccaactgaggtatacaattcttcttaatctattt 44655880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 25494062 - 25494125
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattcttcttaatct 238  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  25494062 aatagtttcataacacgttatcagcacgaacttaccaactgaggtatgcaattcttcttaatct 25494125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 26456957 - 26456872
Alignment:
Q  11 ttatactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaat 96  Q
    ||||||| ||||||||||  ||  ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  26456957 ttatactattagcttattgtgctatattgcgcttgctctccaaatcattgtatttctctataaatagagctcatatgtaacttaat 26456872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 121
Target Start/End: Complemental strand, 38011794 - 38011688
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcaagagaat 112  Q
    ||||| |||| ||||| ||| ||||| | || | |||||||||||||||||| ||||||  ||||||||||||||||||||||||  | ||  |||||||    
T  38011794 atactcttagtttattgggctttattatactggatccccaagtcattgtattactctatctatagagctcatatgtaacctaattgaatat--agagaat 38011697  T
Q  113 aatataatc 121  Q
    |||||||||    
T  38011696 aatataatc 38011688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 32143368 - 32143438
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  32143368 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 32143438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 575971 - 575901
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || || |||||||||||| ||||||| |||||||||||    
T  575971 aatagtttcataacacgttatcagcacgagactctaacgaactgaggtatgtaattctttttaatctattt 575901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 9018660 - 9018595
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattc-ttcttaatctattt 242  Q
    |||||||||||||||||||||  ||||||||||| |||   ||||||||||||| ||||||||||||||    
T  9018660 aatagtttcataacacgttatgagcacgagcttatcaa---aggtatgcaattctttcttaatctattt 9018595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 11726553 - 11726511
Alignment:
Q  51 caagtcattgtatttctctataaatagagctcatatgtaacct 93  Q
    ||||| ||||||||||||||||||||||||||| |||||||||    
T  11726553 caagttattgtatttctctataaatagagctcacatgtaacct 11726511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 96
Target Start/End: Complemental strand, 11726442 - 11726398
Alignment:
Q  52 aagtcattgtatttctctataaatagagctcatatgtaacctaat 96  Q
    |||||||||| ||||| ||||||||||| ||| ||||||||||||    
T  11726442 aagtcattgtgtttctttataaatagaggtcacatgtaacctaat 11726398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 351097 - 350991
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatc--aagagaataa 114  Q
    |||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  351097 tgttagcttattggtccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcataagagaataa 350998  T
Q  115 tataatc 121  Q
    |||||||    
T  350997 tataatc 350991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 345776 - 345670
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatc--aagagaataa 114  Q
    |||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| |||||    
T  345776 tgttagcttattgggccatattgtgcttactccccaagtcattgtatttctctataaatagagctcacatgtaacctaattatacatcataagaaaataa 345677  T
Q  115 tataatc 121  Q
    |||||||    
T  345676 tataatc 345670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 350928 - 350882
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtat 221  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  350928 aatagtttcataacacgttatcagcacgagcttaccaactaaggtat 350882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 6156605 - 6156711
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  6156605 tgttagtttattgggccatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 6156704  T
Q  115 tataatc 121  Q
    |||||||    
T  6156705 tataatc 6156711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 53982145 - 53982254
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagaga 110  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  53982145 atactgttagcttattgggccttattgtgcttgctccc-aagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagaga 53982243  T
Q  111 ataatataatc 121  Q
    |||| ||||||    
T  53982244 ataacataatc 53982254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 6162302 - 6162408
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||| ||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  6162302 tgttagtttattgggtcatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 6162401  T
Q  115 tataatc 121  Q
    |||||||    
T  6162402 tataatc 6162408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 20192697 - 20192591
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  20192697 tgttagcttattgggccatattgtgcttgctcccaaagtcattgtatttctctataaatagagcttatatgtaacctaattatacatcacaagagaataa 20192598  T
Q  115 tataatc 121  Q
    |||||||    
T  20192597 tataatc 20192591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 20198061 - 20197955
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||| ||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||    
T  20198061 tgttagtttattgggccatattgtgcttgctcccaaagtcattgtatttctctataaatagagcttatatgtaacctaattatacatcacaagagaataa 20197962  T
Q  115 tataatc 121  Q
    |||||||    
T  20197961 tataatc 20197955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 6156774 - 6156844
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  6156774 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaatctattt 6156844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 20197872 - 20197802
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||| ||||||    
T  20197872 aatagtttcataacacgttatcagcacgagactctaaccaactgaggtatgtaattctttttaaactattt 20197802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 97
Target Start/End: Complemental strand, 12733982 - 12733943
Alignment:
Q  58 ttgtatttctctataaatagagctcatatgtaacctaatt 97  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  12733982 ttgtatttctctataaatagagctcacatgtaacctaatt 12733943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 12733860 - 12733810
Alignment:
Q  180 tttcataacacgttatcggcacgagcttaccaactgaggtatgcaattctt 230  Q
    |||||||||| |||||| ||||||| ||||||||| |||||||||||||||    
T  12733860 tttcataacaagttatcagcacgagtttaccaactcaggtatgcaattctt 12733810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 14855991 - 14856097
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    ||||||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  14855991 tgttagcatattgggccatattgtgcttgctccccacgtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagagaataa 14856090  T
Q  115 tataatc 121  Q
    |||||||    
T  14856091 tataatc 14856097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 26680621 - 26680730
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagaga 110  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  26680621 atactgttagtttattgggccttattgtgcttgctccc-aagtcattgtatttctctataaatagagctcatatgtaacctaattatacatcacaagaga 26680719  T
Q  111 ataatataatc 121  Q
    |||| ||||||    
T  26680720 ataacataatc 26680730  T

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Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 14847133 - 14847239
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||    
T  14847133 tgttagcttattgggccatattgtgattgctccccacgtcattgtatttctctataaatagaactcatatgtaacctaattatacatcacaagagaataa 14847232  T
Q  115 tataatc 121  Q
    |||||||    
T  14847233 tataatc 14847239  T

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Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 26680784 - 26680851
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  26680784 aatagtttcataacacgttattagcacgagcttaccaactgaggtatgcaattcttcttaatctattt 26680851  T

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Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 6925000 - 6925068
Alignment:
Q  177 tagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||| |||||||   || ||||||||||||||| ||||||| |||||||||||    
T  6925000 tagtttcataacacgttatcagcacgaggctctaaccaactgaggtatgtaattctttttaatctattt 6925068  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 14847302 - 14847372
Alignment:
Q  175 aatagtttcataacacgttatcggcacgag---cttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    ||||||||||||||||||| || |||||||   || |||||||||||| || ||||||| |||||||||||    
T  14847302 aatagtttcataacacgttgtcagcacgagactctaaccaactgaggtgtgtaattctttttaatctattt 14847372  T

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Target: scaffold0169 (Bit Score: 72; Significance: 7e-33; HSPs: 3)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 121
Target Start/End: Original strand, 11008 - 11118
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaatt--atacatcaagaga 110  Q
    ||||| |||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||| | |||||||    
T  11008 atactattagcttattgggtcatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatataacctaattggatataccaagaga 11107  T
Q  111 ataatataatc 121  Q
    |||||||||||    
T  11108 ataatataatc 11118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 8746 - 8853
Alignment:
Q  13 atactgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaatt--atacatcaagaga 110  Q
    ||||| |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||  ||||| |||||||    
T  8746 atactattagcttattgggtcatattgtgcttgctccccaagtcattgtatttctctataaatagagattatatgtaatctaattggatacaccaagaga 8845  T
Q  111 ataatata 118  Q
    ||||||||    
T  8846 ataatata 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 11172 - 11239
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  11172 aatagtttcataacacgttatcagcacgagcttaccaactgatgtatgcaattcttcttaatctattt 11239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 26958 - 27064
Alignment:
Q  17 tgttagcttattaggccttattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataa 114  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||   ||||||||||    
T  26958 tgttagcttattgggtcatattgtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacataataaaacataaaaagagaataa 27057  T
Q  115 tataatc 121  Q
    |||||||    
T  27058 tataatc 27064  T

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Target: scaffold0121 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 11509 - 11425
Alignment:
Q  39 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataatataatc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||   |||||||||||||||||    
T  11509 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaatggtacatactaagagaataatataatc 11425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 11362 - 11295
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattcttcttaatctattt 242  Q
    |||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  11362 aatagttttataacacgttatcagtacgagcttaccaactgaggtatgcaattcttcttaatctattt 11295  T

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Target: scaffold0124 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 39540 - 39624
Alignment:
Q  39 gtgcttgctccccaagtcattgtatttctctataaatagagctcatatgtaacctaattatacat--caagagaataatataatc 121  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||   |||||||||||||||||    
T  39540 gtgcttgctcctcaagtcattgtatttctctataaatagagctcatatgtaacctaatggtacatactaagagaataatataatc 39624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1317 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1317
Description:

Target: scaffold1317; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 175 - 238
Target Start/End: Complemental strand, 1975 - 1912
Alignment:
Q  175 aatagtttcataacacgttatcggcacgagcttaccaactgaggtatgcaattcttcttaatct 238  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  1975 aatagtttcataacacgttatcagcacgaacttaccaactgaggtatgcaattcttcttaatct 1912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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