View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7773_low_5 (Length: 390)
Name: NF7773_low_5
Description: NF7773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7773_low_5 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 353; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 1 - 390
Target Start/End: Complemental strand, 35104932 - 35104544
Alignment:
| Q |
1 |
taacaatgcaccgcattgtttggtgatggtgactacaacataatatatataatggaccccggccattcatgtacaaaaagacaattacttgtcacaatca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35104932 |
taacaatgcaccgcattgtttggtgatggtgactacaacatagtatatataatggaccccggccattcatgtacaaaaagacaattacttgtcacaatca |
35104833 |
T |
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| Q |
101 |
aagtcttaagtgatgataggaacataattttgttattcaatctaaannnnnnngttgatataacgtaggatcatgtcaagtcttaaattcaattttttct |
200 |
Q |
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| T |
35104832 |
aagtcttaagtgatgataggaacataattttgttattcaatctaaatttttttgttgatataacgtaggatcatgtcaagtcttaaattcaattttttct |
35104733 |
T |
|
| Q |
201 |
aacctcaattttaataaactaatttggtttcttaaaataatgtaacatctactttcaactttagagctgcaagaccacctctagttaggctatatattct |
300 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
35104732 |
aacctcaattttaatagactaatttggtttcttaaaataatgtaacatctactttcaactttagagctgcaagaccacctctagttaggct-tatattct |
35104634 |
T |
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| Q |
301 |
cataacaccacaaccagtacctcttacgtgcacttaaagtcttctttcaacggtggccatactataaacaaagaccacctacaccttcat |
390 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35104633 |
cataacaccacaaccagtacctcttacgtgcacttaaagtcttctttcaacggtggccatactataaacaaagaccacctacaccttcat |
35104544 |
T |
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