View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7777_low_1 (Length: 1142)

Name: NF7777_low_1
Description: NF7777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7777_low_1
NF7777_low_1
[»] chr4 (23 HSPs)
chr4 (1-1133)||(5893527-5894661)
chr4 (612-1127)||(5559765-5560294)
chr4 (727-1124)||(3749711-3750108)
chr4 (808-1125)||(5885443-5885760)
chr4 (727-1133)||(5613841-5614247)
chr4 (725-1127)||(5570166-5570568)
chr4 (820-1127)||(5858820-5859127)
chr4 (732-998)||(5847269-5847541)
chr4 (807-1124)||(5852137-5852454)
chr4 (917-1117)||(5582568-5582768)
chr4 (837-1124)||(5553968-5554255)
chr4 (847-1127)||(5538431-5538711)
chr4 (464-536)||(5580072-5580144)
chr4 (444-485)||(5585907-5585948)
chr4 (821-898)||(5565548-5565625)
chr4 (1086-1133)||(5847557-5847604)
chr4 (725-772)||(5885357-5885404)
chr4 (931-995)||(251823-251887)
chr4 (838-898)||(6030834-6030894)
chr4 (1-58)||(1827851-1827908)
chr4 (737-770)||(5565676-5565709)
chr4 (737-770)||(5605994-5606027)
chr4 (1-58)||(15740992-15741049)
[»] chr8 (4 HSPs)
chr8 (737-1124)||(1486008-1486395)
chr8 (792-846)||(23268459-23268513)
chr8 (1-58)||(20825071-20825128)
chr8 (1-58)||(17700252-17700309)
[»] scaffold0454 (1 HSPs)
scaffold0454 (807-1124)||(1191-1511)
[»] chr2 (2 HSPs)
chr2 (64-116)||(21518438-21518490)
chr2 (3-58)||(14440516-14440571)
[»] scaffold1350 (1 HSPs)
scaffold1350 (1-58)||(316-373)
[»] chr5 (4 HSPs)
chr5 (1-58)||(8299493-8299550)
chr5 (1-58)||(10780973-10781030)
chr5 (1-58)||(23239155-23239212)
chr5 (1-58)||(28534987-28535044)
[»] chr6 (1 HSPs)
chr6 (1-53)||(17577028-17577080)
[»] scaffold0472 (1 HSPs)
scaffold0472 (1-58)||(4024-4081)
[»] chr7 (4 HSPs)
chr7 (1-50)||(4344630-4344679)
chr7 (1-58)||(11276559-11276616)
chr7 (1-58)||(17721407-17721464)
chr7 (1-58)||(29968746-29968803)
[»] chr3 (1 HSPs)
chr3 (1-58)||(962474-962531)
[»] chr1 (1 HSPs)
chr1 (1-58)||(35541806-35541863)


Alignment Details
Target: chr4 (Bit Score: 924; Significance: 0; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 924; E-Value: 0
Query Start/End: Original strand, 1 - 1133
Target Start/End: Original strand, 5893527 - 5894661
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttgcagggggtacgtcttgtgctaaaaatatcacattgttggtgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  5893527 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttgcagtggatacgtcttgtgctaaaaatatcacattgttggtgt 5893626  T
Q  101 taatatattctattttcgcatattnnnnnnnttannnnnnnnnnnnnnacgtatggttttgatgatgacatttgtttcttcctcttggtgccatatagtt 200  Q
    |||||||||||||||| |||||||       |||              ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5893627 taatatattctatttttgcatattaaaaaaattatttttttcttttttacgtatggttttgatgatgacatttgtttcttcctcttggtgccatatagtt 5893726  T
Q  201 ttgttgaatgcaattttgttggctttttcaagagaaagatgctattggccattgataatacta--aagggacttatcatcagccatgccggctttacact 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||     
T  5893727 ttgttgaatgcaattttgttggctttttcaagagaaagatgctattggccattgataatactacaaagggacttatcatcagccatgccggctttacacg 5893826  T
Q  299 ttctttacaataatcattaagtcaagagtctctttccttacaatatgatttatatttctgtctcttcagaaactaatccttaaaagtaannnnnnnacca 398  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||        |||    
T  5893827 ttctttaccataatcattaagtcaagagtctctttccttacaatatgatttatatttctgtctcttcagaaactaatccttaaaagaaatttttttgcca 5893926  T
Q  399 aaatattttttaagaaaagcttaggcaaacataactggaaacataaggtatattgctaagaaggttccctaaaattgaatgggaaaggtgagactgcctg 498  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5893927 aaatattttttaagaaaagcttagacaaacataactggaaacataaggtatattgctaagaaggttccctaaaattgaatgggaaaggtgagactacctg 5894026  T
Q  499 tcaaaaatgaatggaagagttggaagtcatggtgtgagcgaccacgctggtcttcttaaaagaaaagtctcttgtactgtagctatttgcctgtttgcaa 598  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||| |||||||  ||||||||||| |||||||||||||||||||||    
T  5894027 tcaaaaatgaatggaagagttggaagtcatggtgtgagtgaccacactgctcttcttcaaagaaacttctcttgtactctagctatttgcctgtttgcaa 5894126  T
Q  599 ctatatatataataccatttatcacatacatcatatacatcaaactaaaattgtgtcttgagagtaatcagagagagcaatgagaatttcattccttatc 698  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5894127 ctatatatataataccatttatcacatacatcatatacatcaaactaaaattgtgtcttgagagtaatcagagagagcaatgagaatttcattccttctc 5894226  T
Q  699 tgttactactgcatatatatcactcatgcctcagccatatgtcttgaggatcaacaatcattgttgctccaattcnnnnnnnntttcaaattccatcctg 798  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        | ||| ||| |||||||    
T  5894227 tgttactactgcatatatatcactcatgcctcagccatatgtcttgaggatcaacaatcattgttgctccaattcaaaaaaaatctcacatttcatcctg 5894326  T
Q  799 aaggttctaccaaactaatattgtggaataaaaccactgcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgacct 898  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5894327 aaggttctaccaaactaatattgtggaataaaaccactgcttgctgcaattggagtggtgtaacttgtgacaatgagggacatgttattggccttgacct 5894426  T
Q  899 tagtgacgaagatatccatggtggatttaacgattcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattct 998  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5894427 tagtgacgaagatatccatggtggatttaacgattcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattct 5894526  T
Q  999 ctaattccatcaggattcagcaaattggagaagttgacttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaactta 1098  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5894527 ctaattccatcaggattcagcaaattggagaagttgacttatctgaatttgtcaaaggctagctttgtggggcagattccaattgagatttcacaactta 5894626  T
Q  1099 caaggttggttactcttgatctctcttctgatgtc 1133  Q
    ||||||||||||||||||||||||||| |||||||    
T  5894627 caaggttggttactcttgatctctcttttgatgtc 5894661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 612 - 1127
Target Start/End: Complemental strand, 5560294 - 5559765
Alignment:
Q  612 accatttatcacatacatcatatacatcaaactaaaattgtgtcttgagagtaatca----ga--gagagcaatgagaatt---------tcattcctta 696  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||| |    ||  ||||||||||||||||         |||||||||     
T  5560294 accatttatcacatacatcatatatatcaaactaaaattgtgtcc-gagagtaattaattagaatgagagcaatgagaattatattagtttcattccttc 5560196  T
Q  697 tctgttactactgcatatatatcactcatgcctcagccatatgtcttgaggatcaacaatcattgttgctccaattcnnnnnnnntttcaaattccatcc 796  Q
    |||| ||||||| |||||||||||||||||||||  ||| |||||||||||||||||||||||||||||  |||||         | ||| |||| ||||    
T  5560195 tctgctactacttcatatatatcactcatgcctctaccaaatgtcttgaggatcaacaatcattgttgcatcaattaaaaaacaatctcacattcaatcc 5560096  T
Q  797 tgaaggttctaccaaactaatattgtggaataaaaccactgcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgac 896  Q
    ||||  ||| ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| || ||||||| |||||| ||||||||||||||||||    
T  5560095 tgaatattccaccaaactaatattgtggaatcaaagcactgcttgctgcaattggaggggtgttacatgtgacattgagggacatgttattggccttgac 5559996  T
Q  897 cttagtgacgaagatatccatggtggatttaacgattcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaatt 996  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | | | ||| ||| | |||||||| |||||| ||||| |||||||||    
T  5559995 cttagtgacgaagatatccatggtggatttaacgattcaagcagtcttttcagtttgcaacacctccagaaactgaatttggctgataactatttcaatt 5559896  T
Q  997 ctctaattccatcaggattcagcaaattggagaagttgacttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaact 1096  Q
    ||   |||||||||||||||| ||| |||||||||||||| ||||||||||||||| | ||||||||||||||| | |||||  | |||||||| || ||    
T  5559895 cttccattccatcaggattcaacaagttggagaagttgacatatctgaatttgtcatatgctagctttgtggggcaaattcctgtagagatttctcagct 5559796  T
Q  1097 tacaaggttggttactcttgatctctcttct 1127  Q
     | ||||||||||||||||||||||||||||    
T  5559795 caaaaggttggttactcttgatctctcttct 5559765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 166; E-Value: 3e-88
Query Start/End: Original strand, 727 - 1124
Target Start/End: Complemental strand, 3750108 - 3749711
Alignment:
Q  727 cctcagccatatgtcttgaggatcaacaatcattgttgctccaattcnnnnnnnntttcaaattccatcctgaaggttctaccaaactaatattgtggaa 826  Q
    |||| |||| |||||||||||||||||||||||||||||| |||||         | ||| |||| | | |||| |||| |||||||||  |||||||||    
T  3750108 cctctgccaaatgtcttgaggatcaacaatcattgttgcttcaattaaaaaacaatctcacattcaaccatgaaagttccaccaaactagaattgtggaa 3750009  T
Q  827 taaaaccactgcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgaccttagtgacgaagatatccatggtggattt 926  Q
    ||||| || |||||||||||||||||||||||| || ||  ||||||| || |||||||| |||||||| || ||||||||| | ||| |||||||||||    
T  3750008 taaaagcattgcttgctgcaattggagtggtgttacatgcaacaatgatggacatgttatcggccttgatctgagtgacgaaaagatcgatggtggattt 3749909  T
Q  927 aacgattcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattctctaattccatcaggattcagcaaattgg 1026  Q
    ||||||||||| |||||||||| ||| | ||||||| ||||| | |||||||| || ||| ||||||||||||  ||||||||| |||||| ||| ||||    
T  3749908 aacgattcaagtagtcttttcagtcttcaacatctccaaaaattaaacttggcatacaaccatttcaattctcacattccatcaagattcatcaagttgg 3749809  T
Q  1027 agaagttgacttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaacttacaaggttggttactcttgatctctct 1124  Q
    | |||||||| ||||||||||||||| | ||||||||||| ||| ||||||| ||||||||||| || |||||||||||||||| |||||||||||||    
T  3749808 ataagttgacatatctgaatttgtcacaagctagctttgtagggcagattccgattgagatttcgcagcttacaaggttggttattcttgatctctct 3749711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 808 - 1125
Target Start/End: Original strand, 5885443 - 5885760
Alignment:
Q  808 ccaaactaatattgtggaataaaaccactgcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgaccttagtgacga 907  Q
    |||||||||||||||||||| ||| ||| |||||||||| |||||||||||| |||||||||||||||||  ||||| ||||||||||||| ||||  ||    
T  5885443 ccaaactaatattgtggaatcaaaacacggcttgctgcagttggagtggtgttacttgtgacaatgagggatatgttgttggccttgacctgagtggaga 5885542  T
Q  908 agatatccatggtggatttaacgattcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattctctaattcca 1007  Q
    |  |||   |||||||||| |||| ||||| |||||||||| |||| | |||||||| ||||||||||||||| ||||  |||| ||||||   ||||||    
T  5885543 atctatttttggtggatttgacgaatcaagtagtcttttcagtctcttgcatctcaagaaactgaacttggctgataattatttaaattcttccattcca 5885642  T
Q  1008 tcaggattcagcaaattggagaagttgacttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaacttacaaggttgg 1107  Q
    ||||  |||| ||| |||||||||||||||||||||||||||||| | ||| | |||  |||||||||||||||||||||||| || |||||||||||||    
T  5885643 tcagctttcaacaagttggagaagttgacttatctgaatttgtcagatgctggatttcagggggagattccaattgagatttcccatcttacaaggttgg 5885742  T
Q  1108 ttactcttgatctctctt 1125  Q
    ||||||||||| ||||||    
T  5885743 ttactcttgatatctctt 5885760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 727 - 1133
Target Start/End: Complemental strand, 5614247 - 5613841
Alignment:
Q  727 cctcagccatatgtcttgaggatcaacaatcattgttgctccaattcnnnnnnnntttcaaattccatcctgaaggttctaccaaactaatattgtggaa 826  Q
    |||| |||| ||||||||||||||||| | | |||||||| ||||||        | ||  ||| |||||||||  ||| || |||||||||||||||||    
T  5614247 cctctgccaaatgtcttgaggatcaacgaactttgttgcttcaattcaaaaacaatctcgcatttcatcctgaaaattccacaaaactaatattgtggaa 5614148  T
Q  827 taaaaccactgcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgaccttagtgacgaagatatccatggtggattt 926  Q
    ||||| || ||| ||||||||||||||||| || ||||||||||| |||||  || |||||||||||||||| ||||| |||  |||   ||||||| ||    
T  5614147 taaaagcattgcatgctgcaattggagtggcgttacttgtgacaacgagggatatattattggccttgacctgagtgaagaatctatttctggtggaatt 5614048  T
Q  927 aacgattcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattctctaattccatcaggattcagcaaattgg 1026  Q
     | || ||||| |||||||||||||||||||||||||| ||||||||||||||| ||||  |||| ||||||   |||||||||| ||||| ||| ||||    
T  5614047 gaagaatcaagtagtcttttcaatctcctacatctcaagaaactgaacttggctaataattatttaaattcttccattccatcagcattcaacaagttgg 5613948  T
Q  1027 agaagttgacttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaacttacaaggttggttactcttgatctctcttc 1126  Q
     |||||| ||||||||  |||||||| |   |   ||||||||| |||||||||| |||||||| || || || ||||||||||||||||||||||||||    
T  5613947 tgaagttaacttatcttgatttgtcatataatgaatttgtggggcagattccaatagagatttcccagctcacgaggttggttactcttgatctctcttc 5613848  T
Q  1127 tgatgtc 1133  Q
    | |||||    
T  5613847 ttatgtc 5613841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 725 - 1127
Target Start/End: Original strand, 5570166 - 5570568
Alignment:
Q  725 tgcctcagccatatgtcttgaggatcaacaatcattgttgctccaattcnnnnnnnntttcaaattccatcctgaaggttctaccaaactaatattgtgg 824  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||| |         | ||| || | | ||||||  ||| |||||||||| ||| |||    
T  5570166 tgcctcagccaaatgtcttgaggatcaacaatcgttgttgctccaactaaaaaataatctcacatacaaccctgaaacttccaccaaactaaaattatgg 5570265  T
Q  825 aataaaaccactgcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgaccttagtgacgaagatatccatggtggat 924  Q
    ||||| | ||||||||||||| |||||| |||||||| ||||||||   | || || || |||||||||||| ||| ||  ||||| |||  || ||| |    
T  5570266 aataagagcactgcttgctgctattggaatggtgtaagttgtgacagcaaaggacacgtgattggccttgactttattgcagaagacatctctgatggtt 5570365  T
Q  925 ttaacgattcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattctctaattccatcaggattcagcaaatt 1024  Q
    || |  ||||||| |||||||| | |||||  |||||  ||||| ||||||||||| ||||||||||||||||| | |||||||||||||| | ||||||    
T  5570366 ttgataattcaagtagtctttttagtctccatcatcttcaaaaattgaacttggctgataacaatttcaattctgttattccatcaggatttaacaaatt 5570465  T
Q  1025 ggagaagttgacttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaacttacaaggttggttactcttgatctctct 1124  Q
    || || ||||| |||||||||||| ||| | |||| |||||||||| | ||| | || |||||||| || ||||||||||||||||||||||||||||||    
T  5570466 ggtgatgttgaattatctgaatttatcatatgctaactttgtggggcatatttctatagagatttctcagcttacaaggttggttactcttgatctctct 5570565  T
Q  1125 tct 1127  Q
    |||    
T  5570566 tct 5570568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 820 - 1127
Target Start/End: Complemental strand, 5859127 - 5858820
Alignment:
Q  820 tgtggaataaaaccactgcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgaccttagtgacgaagatatccatgg 919  Q
    |||||||| ||| || ||| |||||||| |||||||||||||||||||||| ||| || |||||||||||||||||| | ||||  ||| ||||| ||||    
T  5859127 tgtggaatcaaagcattgcatgctgcaactggagtggtgtaacttgtgacagtgaaggacatgttattggccttgacttgagtgcagaatatatctatgg 5859028  T
Q  920 tggatttaacgattcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattctctaattccatcaggattcagc 1019  Q
    ||||||| |  || |||||||||| ||   ||||| ||||||| ||||| |||||||||||| ||||||||||||||||   |||||||||| ||||| |    
T  5859027 tggatttgaaaatacaagcagtctatttggtctccaacatctccaaaaagtgaacttggcttttaacaatttcaattcttccattccatcagcattcaac 5858928  T
Q  1020 aaattggagaagttgacttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaacttacaaggttggttactcttgatc 1119  Q
    ||  ||||||||||||| ||||||||| |  || | ||||| |||   ||| |||||||||| || ||||| || |||| |||||||||||||||||||     
T  5858927 aagctggagaagttgacatatctgaatcttacagatgctagatttcacgggaagattccaatagaaatttcccagcttataaggttggttactcttgata 5858828  T
Q  1120 tctcttct 1127  Q
    ||||||||    
T  5858827 tctcttct 5858820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 732 - 998
Target Start/End: Original strand, 5847269 - 5847541
Alignment:
Q  732 gccatatgtcttgaggatcaacaatcattgttgctccaattcnnnnnnnntttcaaattccatcctgaaggttctaccaaactaatattgtggaataaaa 831  Q
    |||| |||||||||||||||||||||||| ||| |||||||         | ||| ||| ||||||||   ||| || ||||||||||||||||||||||    
T  5847269 gccaaatgtcttgaggatcaacaatcatttttgatccaatttaaaaacaatctcacatttcatcctgagaattccacgaaactaatattgtggaataaaa 5847368  T
Q  832 ccactgcttgctgcaa------ttggagtggtgtaacttgtgacaatgagggccatgttattggccttgaccttagtgacgaagatatccatggtggatt 925  Q
     || ||||||||||||      |||||||||||| || ||||||||||||||  ||||||||||||||||||| ||||| |||  |||    ||||||||    
T  5847369 gcattgcttgctgcaagtgcaattggagtggtgttacctgtgacaatgagggatatgttattggccttgacctgagtgaagaatctatttcaggtggatt 5847468  T
Q  926 taacgattcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattct 998  Q
    |||||| ||||| | ||||||||||||||||||||||||  |||||||||||||| ||||  |||| ||||||    
T  5847469 taacgaatcaagtattcttttcaatctcctacatctcaaggaactgaacttggctcataattatttaaattct 5847541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 807 - 1124
Target Start/End: Original strand, 5852137 - 5852454
Alignment:
Q  807 accaaactaatattgtggaataaaaccactgcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgaccttagtgacg 906  Q
    |||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||| || || || |||||||||||| | ||||| |    
T  5852137 accaaactaaaattctggaataaaatcattgcttgctgcgattggagtggtgtaacttgtgacagtgaaggacaagtgattggccttgacttgagtgaag 5852236  T
Q  907 aagatatccatggtggatttaacgattcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattctctaattcc 1006  Q
    ||||||||  || ||| ||| |  ||||||| |||||||||| ||||  ||||||| | |||||||| ||||||||||||   ||  |  || | |||||    
T  5852237 aagatatctctgatggttttgataattcaagtagtcttttcagtctcgaacatctccagaaactgaatttggcttataacttgtttgaaactgtcattcc 5852336  T
Q  1007 atcaggattcagcaaattggagaagttgacttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaacttacaaggttg 1106  Q
    ||| ||||||| ||| |||| || ||||| |||||||||||| ||| |  | ||||||  ||| ||||||||  | ||||||||| | |||||||  |||    
T  5852337 atcgggattcaacaagttggtgatgttgaattatctgaatttttcacactcaagctttaagggagagattcctgtagagatttcaaatcttacaaatttg 5852436  T
Q  1107 gttactcttgatctctct 1124  Q
     ||||||||||| |||||    
T  5852437 attactcttgatatctct 5852454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 917 - 1117
Target Start/End: Original strand, 5582568 - 5582768
Alignment:
Q  917 tggtggatttaacgattcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattctctaattccatcaggattc 1016  Q
    |||||||||| |  || ||||||||||||| | ||| | ||||||  ||||| |||||||||||  |||||||||||||||| | |||||||||||||||    
T  5582568 tggtggatttgataatgcaagcagtctttttagtcttcaacatcttcaaaaattgaacttggctgctaacaatttcaattctgtcattccatcaggattc 5582667  T
Q  1017 agcaaattggagaagttgacttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaacttacaaggttggttactcttg 1116  Q
    | ||| |||| || ||||| |||| ||||||||||| | |||| |||||||||| | ||||| || |||||||| || ||||||||||||||||||||||    
T  5582668 aacaagttggtgatgttgagttatttgaatttgtcatatgctaactttgtggggcaaattcctatagagatttctcagcttacaaggttggttactcttg 5582767  T
Q  1117 a 1117  Q
    |    
T  5582768 a 5582768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 837 - 1124
Target Start/End: Complemental strand, 5554255 - 5553968
Alignment:
Q  837 gcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgaccttagtgacgaagatatccatggtggatttaacgattcaa 936  Q
    ||||||||||||||||| |||||||||||||||| |   || || || |||||||| ||| | ||||| ||| ||||||||||||||||| |   |||||    
T  5554255 gcttgctgcaattggagcggtgtaacttgtgacagtagaggacaagtgattggcctcgacttaagtgaagaacatatccatggtggatttgatagttcaa 5554156  T
Q  937 gcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattctctaattccatcaggattcagcaaattggagaagttgac 1036  Q
    | |||||||||| ||||   |||||| | |||||||| ||||||||||||   ||| |  || | |||||||||||||||| |||||||| || |||||     
T  5554155 gtagtcttttcagtctcgatcatctccagaaactgaatttggcttataacttgttcgaaactttcattccatcaggattcaacaaattggtgatgttgaa 5554056  T
Q  1037 ttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaacttacaaggttggttactcttgatctctct 1124  Q
    |||||| ||||| ||| | || ||||||  ||| |||||||| || || |||||||| |||||||  ||| ||||||||||| |||||    
T  5554055 ttatcttaatttttcacacgcaagctttcagggtgagattcctatagatatttcacagcttacaaatttgattactcttgatatctct 5553968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 847 - 1127
Target Start/End: Original strand, 5538431 - 5538711
Alignment:
Q  847 attggagtggtgtaacttgtgacaatgagggccatgttattggccttgaccttagtgacgaagatatccatggtggatttaacgattcaagcagtctttt 946  Q
    |||||| ||||||| |||||||||||  |||   ||||||||| ||||| || ||||| |||   |||  |||||||||| |  || |||| ||||||||    
T  5538431 attggaatggtgtagcttgtgacaataggggatttgttattggtcttgatctgagtgaagaatcaatcactggtggatttgataatacaagtagtctttt 5538530  T
Q  947 caatctcctacatctcaaaaaactgaacttggcttataacaatttcaattctctaattccatcaggattcagcaaattggagaagttgacttatctgaat 1046  Q
     | ||| | | ||||  | ||| |||||||||||  ||||||||||| ||||   |||||| ||||||||| ||| |||| || ||||| ||||||||||    
T  5538531 tagtcttcaaaatcttcagaaattgaacttggctgctaacaatttcagttctgctattccaccaggattcaacaagttggtgatgttgagttatctgaat 5538630  T
Q  1047 ttgtcaaaggctagctttgtgggggagattccaattgagatttcacaacttacaaggttggttactcttgatctctcttct 1127  Q
    |||||| | |||| |||||||||| |||||||  | |||||||| || |||||||||||||| ||||| ||| ||||||||    
T  5538631 ttgtcatatgctaactttgtggggcagattcctttagagatttctcagcttacaaggttggtaactctagatatctcttct 5538711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 464 - 536
Target Start/End: Complemental strand, 5580144 - 5580072
Alignment:
Q  464 tccctaaaattgaatgggaaaggtgagactgcctgtcaaaaatgaatggaagagttggaagtcatggtgtgag 536  Q
    |||||||||||||||||||||||||| ||| || ||||||||||||||||||| ||||||||||| |||||||    
T  5580144 tccctaaaattgaatgggaaaggtgacactacccgtcaaaaatgaatggaagacttggaagtcatcgtgtgag 5580072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 444 - 485
Target Start/End: Complemental strand, 5585948 - 5585907
Alignment:
Q  444 aggtatattgctaagaaggttccctaaaattgaatgggaaag 485  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  5585948 aggtatattgctaagaaggttccctaaaattgaatgggaaag 5585907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 821 - 898
Target Start/End: Complemental strand, 5565625 - 5565548
Alignment:
Q  821 gtggaataaaaccactgcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgacct 898  Q
    ||||||| ||| || | ||||||||||||||||||||||||| ||||| || ||||| || ||||| |||||||||||    
T  5565625 gtggaatcaaagcattccttgctgcaattggagtggtgtaacctgtgataacgaggggcaagttataggccttgacct 5565548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1086 - 1133
Target Start/End: Original strand, 5847557 - 5847604
Alignment:
Q  1086 atttcacaacttacaaggttggttactcttgatctctcttctgatgtc 1133  Q
    ||||||||||| || ||||||||||||||||||||||||||| |||||    
T  5847557 atttcacaactcacgaggttggttactcttgatctctcttcttatgtc 5847604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 725 - 772
Target Start/End: Original strand, 5885357 - 5885404
Alignment:
Q  725 tgcctcagccatatgtcttgaggatcaacaatcattgttgctccaatt 772  Q
    |||||| |||| |||||||||||||||||||||| |||||||||||||    
T  5885357 tgcctctgccaaatgtcttgaggatcaacaatcactgttgctccaatt 5885404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 931 - 995
Target Start/End: Original strand, 251823 - 251887
Alignment:
Q  931 attcaagcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaat 995  Q
    ||||||| |||||||||  ||||| ||||||| |||||||||| ||||||  |||||||||||||    
T  251823 attcaagtagtcttttctgtctccaacatctccaaaaactgaatttggctgctaacaatttcaat 251887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 838 - 898
Target Start/End: Original strand, 6030834 - 6030894
Alignment:
Q  838 cttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgacct 898  Q
    |||||||||||||||| |||||||||| |||||||||  | |||||||| ||||| |||||    
T  6030834 cttgctgcaattggagcggtgtaacttttgacaatgaatgacatgttatgggcctagacct 6030894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1827851 - 1827908
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||  |||||||| |||| ||||||||| ||||    
T  1827851 tcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttg 1827908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 737 - 770
Target Start/End: Complemental strand, 5565709 - 5565676
Alignment:
Q  737 atgtcttgaggatcaacaatcattgttgctccaa 770  Q
    |||||||||||||||||||||||| |||||||||    
T  5565709 atgtcttgaggatcaacaatcattattgctccaa 5565676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 737 - 770
Target Start/End: Complemental strand, 5606027 - 5605994
Alignment:
Q  737 atgtcttgaggatcaacaatcattgttgctccaa 770  Q
    |||||||||||||||||||||||| |||||||||    
T  5606027 atgtcttgaggatcaacaatcattattgctccaa 5605994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15741049 - 15740992
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||  |||||||| |||| ||||||||| ||||    
T  15741049 tcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttg 15740992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 6e-80; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 737 - 1124
Target Start/End: Complemental strand, 1486395 - 1486008
Alignment:
Q  737 atgtcttgaggatcaacaatcattgttgctccaattcnnnnnnnntttcaaattccatcctgaaggttctaccaaactaatattgtggaataaaaccact 836  Q
    |||||||||||||||||| |||||||||||||| ||         | ||| |||  ||| ||||  ||| |||||||||| ||| |||||||||| ||||    
T  1486395 atgtcttgaggatcaacactcattgttgctccagttaaaaaacaatctcacatttgatcatgaattttccaccaaactaaaattatggaataaaaacact 1486296  T
Q  837 gcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgaccttagtgacgaagatatccatggtggatttaacgattcaa 936  Q
     |||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| |||   |||  ||||||||||||| ||||||    
T  1486295 acttgctgcaattggagtggtgttacttgtgacaatgagggacatgttattgaccttgaccttagtgaagaatcaatcactggtggatttaacaattcaa 1486196  T
Q  937 gcagtcttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattctctaattccatcaggattcagcaaattggagaagttgac 1036  Q
    | |||||||| | ||||| ||||||| | | ||| ||||| ||| | ||||  ||||||||||| || ||||||||||||| |||||||| || |||||     
T  1486195 gtagtctttttagtctccaacatctcgagagactcaacttagctgaaaacagattcaattctctcatcccatcaggattcaacaaattggtgatgttgaa 1486096  T
Q  1037 ttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaacttacaaggttggttactcttgatctctct 1124  Q
    |||| ||||||||||| | ||||||||||| ||||||||||| || |||||||||||||||||||  ||||||||||||||| |||||    
T  1486095 ttatttgaatttgtcacatgctagctttgtaggggagattcctatagagatttcacaacttacaaatttggttactcttgatttctct 1486008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 792 - 846
Target Start/End: Complemental strand, 23268513 - 23268459
Alignment:
Q  792 catcctgaaggttctaccaaactaatattgtggaataaaaccactgcttgctgca 846  Q
    |||||||||  ||| || |||||||||||||||||||||| ||||||||||||||    
T  23268513 catcctgaaaattccacaaaactaatattgtggaataaaagcactgcttgctgca 23268459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20825128 - 20825071
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||| |||||||| |||| ||||||||| ||||    
T  20825128 tcaaagctccgtcaggtataatctcttctattgaatctttgtttaataaatttttttg 20825071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17700309 - 17700252
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| |||||||  ||||||||||||| |||||||| |||| ||||||||| ||||    
T  17700309 tcaaagctccgtcagatataatctcttctattgaatctttgttaaataaatttttttg 17700252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 129; Significance: 3e-66; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 807 - 1124
Target Start/End: Complemental strand, 1511 - 1191
Alignment:
Q  807 accaaactaatattgtggaataaaacca-ctgcttgctgcaattggagtggtgtaacttgtgacaatgagggccatgttattggccttgaccttagtgac 905  Q
    |||||||||| ||| |||||||||| || || |||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||     
T  1511 accaaactaaaattatggaataaaaacaactacttgctgcaattggagtggtgttacttgtgacaatgagggacatgttattgaccttgaccttagtgaa 1412  T
Q  906 gaagatatccatggtggatttaacgattcaagcagtc-ttttcaatctcctacatctcaaaaaactgaacttggcttataacaatttcaattctctaatt 1004  Q
    |||   |||  ||||||||||||| ||||||| |||| |||| | ||||| ||||||| | | ||| ||||| ||| | ||||  ||||||||||| ||     
T  1411 gaatcaatcactggtggatttaacaattcaagtagtcttttttagtctccaacatctcgagagactcaacttagctgaaaacagattcaattctctcatc 1312  T
Q  1005 ccatcaggattcagcaaattggagaagttg-acttatctgaatttgtcaaaggctagctttgtgggggagattccaattgagatttcacaacttacaagg 1103  Q
    ||||||||||||| |||||||| || |||| | |||| ||||||||||| | ||||||||||| ||||||||||| || |||||||||||||||||||      
T  1311 ccatcaggattcaacaaattggtgatgttgaatttatttgaatttgtcacatgctagctttgtaggggagattcctatagagatttcacaacttacaaat 1212  T
Q  1104 ttggttactcttgatctctct 1124  Q
    ||||||||||||||| |||||    
T  1211 ttggttactcttgatttctct 1191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 21518438 - 21518490
Alignment:
Q  64 ggtacgtcttgtgctaaaaatatcacattgttggtgttaatatattctatttt 116  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||| |||||    
T  21518438 ggtacgtcttgtgctaaaaagatcacattgttgatgttaatatattcaatttt 21518490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 14440571 - 14440516
Alignment:
Q  3 aaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||| ||||||| |||||||||||||| |||||||| |||| ||||||||| ||||    
T  14440571 aaagctccgtcaggtataatctcttctattgaatctttgttaaataaatttttttg 14440516  T

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Target: scaffold1350 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 373 - 316
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| |||||||||||||||||||||  |||||||| |||| ||||||||| ||||    
T  373 tcaaagctccgtcaagtataatctcttcaattgaatctttgttaaataaatttttttg 316  T

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Target: chr5 (Bit Score: 34; Significance: 0.000000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8299493 - 8299550
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||| |||||||| |||| ||||||||| ||||    
T  8299493 tcaaagctccgtcaggtataatctcttctattgaatctttgtttaataaatttttttg 8299550  T

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Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10781030 - 10780973
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||| |||||||| |||| ||||||||| ||||    
T  10781030 tcaaagctccgtcaggtataatctcttctattgaatctttgttaaataaatttttttg 10780973  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23239212 - 23239155
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||  |||||||| |||| ||||||||| ||||    
T  23239212 tcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttg 23239155  T

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Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 28534987 - 28535044
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||  |||||||| |||| ||||||||| ||||    
T  28534987 tcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttg 28535044  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000007; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17577028 - 17577080
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaattt 53  Q
    |||||| ||||||| |||||||||||||| |||||||| |||| |||||||||    
T  17577028 tcaaagctccgtcaggtataatctcttctattgaatctttgtttaataaattt 17577080  T

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Target: scaffold0472 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4081 - 4024
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||  |||||||| |||| ||||||||| ||||    
T  4081 tcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttg 4024  T

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Target: chr7 (Bit Score: 30; Significance: 0.0000004; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4344679 - 4344630
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaa 50  Q
    |||||| ||| ||| |||||||||||||| ||||||||||||| ||||||    
T  4344679 tcaaagctccctcatgtataatctcttctattgaatctatgtttaataaa 4344630  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11276559 - 11276616
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||  |||||||| |||| ||||||||| ||||    
T  11276559 tcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttg 11276616  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17721464 - 17721407
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||  |||||||| |||| ||||||||| ||||    
T  17721464 tcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttg 17721407  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29968803 - 29968746
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||  |||||||| |||| ||||||||| ||||    
T  29968803 tcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttg 29968746  T

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Target: chr3 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 962474 - 962531
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||  |||||||| |||| ||||||||| ||||    
T  962474 tcaaagctccgtcaggtataatctcttccattgaatctttgttaaataaatttttttg 962531  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35541863 - 35541806
Alignment:
Q  1 tcaaagttccgtcaagtataatctcttctcttgaatctatgttgaataaatttgtttg 58  Q
    |||||| ||||||| |||||||||||||  |||||||| |||| ||||||||| ||||    
T  35541863 tcaaagctccgtcaggtataatctcttccattgaatctttgtttaataaatttttttg 35541806  T

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