View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7777_low_33 (Length: 276)

Name: NF7777_low_33
Description: NF7777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7777_low_33
NF7777_low_33
[»] chr5 (34 HSPs)
chr5 (42-186)||(19563405-19563547)
chr5 (181-271)||(19563661-19563751)
chr5 (116-186)||(11880924-11880994)
chr5 (116-185)||(41210452-41210520)
chr5 (116-183)||(91279-91346)
chr5 (116-183)||(9636098-9636165)
chr5 (116-179)||(12891040-12891103)
chr5 (116-183)||(19437321-19437388)
chr5 (123-184)||(125163-125224)
chr5 (123-184)||(19376071-19376132)
chr5 (123-184)||(34381083-34381144)
chr5 (116-184)||(3960108-3960176)
chr5 (228-276)||(23647774-23647822)
chr5 (228-276)||(23810751-23810799)
chr5 (116-184)||(23991295-23991363)
chr5 (116-176)||(25585403-25585463)
chr5 (128-184)||(39595350-39595406)
chr5 (116-183)||(13734300-13734367)
chr5 (116-179)||(27340933-27340996)
chr5 (116-183)||(40566157-40566224)
chr5 (142-184)||(471904-471946)
chr5 (125-183)||(6865727-6865785)
chr5 (122-184)||(8959230-8959292)
chr5 (134-184)||(16553586-16553636)
chr5 (116-185)||(29803289-29803356)
chr5 (134-184)||(41192669-41192719)
chr5 (128-181)||(5005189-5005242)
chr5 (123-184)||(5130317-5130378)
chr5 (123-184)||(11666250-11666311)
chr5 (123-184)||(28811499-28811560)
chr5 (116-176)||(12718327-12718387)
chr5 (116-176)||(12779553-12779613)
chr5 (116-184)||(35098671-35098739)
chr5 (116-184)||(41460180-41460248)
[»] chr6 (12 HSPs)
chr6 (116-186)||(32729953-32730023)
chr6 (116-184)||(16743205-16743273)
chr6 (134-184)||(3339438-3339488)
chr6 (116-184)||(21857508-21857576)
chr6 (116-179)||(2165244-2165307)
chr6 (116-179)||(2176877-2176940)
chr6 (134-185)||(11742922-11742973)
chr6 (142-184)||(2582752-2582794)
chr6 (125-183)||(16533200-16533258)
chr6 (123-184)||(32457191-32457252)
chr6 (116-185)||(34490411-34490480)
chr6 (116-184)||(14094975-14095043)
[»] chr3 (44 HSPs)
chr3 (123-184)||(37303454-37303515)
chr3 (116-183)||(1901866-1901933)
chr3 (116-183)||(1911312-1911379)
chr3 (116-183)||(13724350-13724417)
chr3 (116-186)||(1295396-1295466)
chr3 (116-186)||(37710468-37710538)
chr3 (123-184)||(8066426-8066487)
chr3 (116-180)||(36869780-36869844)
chr3 (117-183)||(462341-462407)
chr3 (123-184)||(33007431-33007492)
chr3 (117-186)||(41717328-41717397)
chr3 (123-184)||(46473199-46473260)
chr3 (116-188)||(20549321-20549392)
chr3 (116-184)||(34208331-34208399)
chr3 (123-183)||(35554055-35554115)
chr3 (228-272)||(36364992-36365036)
chr3 (134-181)||(16295546-16295593)
chr3 (116-183)||(25959482-25959549)
chr3 (116-179)||(35368675-35368738)
chr3 (143-186)||(50294061-50294104)
chr3 (116-179)||(50745613-50745676)
chr3 (116-186)||(7151-7221)
chr3 (116-178)||(14838990-14839052)
chr3 (134-184)||(25142710-25142760)
chr3 (125-183)||(32656048-32656106)
chr3 (129-183)||(32795913-32795967)
chr3 (134-184)||(34021402-34021452)
chr3 (134-184)||(35272109-35272159)
chr3 (134-184)||(37215170-37215220)
chr3 (120-182)||(42864975-42865037)
chr3 (116-178)||(44689867-44689929)
chr3 (116-169)||(1834570-1834623)
chr3 (123-184)||(6126525-6126586)
chr3 (116-181)||(21481828-21481893)
chr3 (116-181)||(25559768-25559833)
chr3 (123-184)||(28269877-28269938)
chr3 (142-183)||(28300586-28300627)
chr3 (135-184)||(39604185-39604234)
chr3 (115-184)||(42102300-42102369)
chr3 (123-184)||(53102841-53102902)
chr3 (116-183)||(18181507-18181572)
chr3 (116-184)||(32687899-32687967)
chr3 (116-184)||(36799462-36799530)
chr3 (116-184)||(49457629-49457697)
[»] chr1 (41 HSPs)
chr1 (116-184)||(40595993-40596061)
chr1 (116-183)||(25098728-25098795)
chr1 (116-183)||(27352694-27352761)
chr1 (116-186)||(4604593-4604663)
chr1 (116-186)||(50527994-50528064)
chr1 (116-185)||(16987511-16987580)
chr1 (116-184)||(47059829-47059897)
chr1 (116-186)||(36930693-36930761)
chr1 (116-186)||(25061797-25061867)
chr1 (125-183)||(51339640-51339698)
chr1 (116-181)||(2827652-2827717)
chr1 (116-181)||(17167913-17167978)
chr1 (123-184)||(39010885-39010946)
chr1 (116-185)||(48325286-48325355)
chr1 (116-184)||(15182522-15182590)
chr1 (116-184)||(32966331-32966399)
chr1 (116-184)||(49425801-49425869)
chr1 (116-176)||(50460659-50460719)
chr1 (119-185)||(19651477-19651541)
chr1 (117-184)||(20288278-20288345)
chr1 (116-183)||(24775039-24775106)
chr1 (117-184)||(35846258-35846325)
chr1 (116-186)||(6841855-6841925)
chr1 (134-184)||(7203783-7203833)
chr1 (144-186)||(10121853-10121895)
chr1 (134-184)||(25302584-25302634)
chr1 (116-185)||(25988924-25988991)
chr1 (134-184)||(25995542-25995592)
chr1 (119-181)||(43196031-43196093)
chr1 (116-181)||(43612024-43612087)
chr1 (125-183)||(48872452-48872510)
chr1 (116-178)||(48962050-48962112)
chr1 (116-185)||(21255723-21255792)
chr1 (123-180)||(28253086-28253143)
chr1 (116-181)||(37947162-37947227)
chr1 (123-180)||(40610300-40610357)
chr1 (116-181)||(46903534-46903599)
chr1 (122-178)||(578874-578930)
chr1 (116-184)||(17526484-17526552)
chr1 (122-178)||(23399934-23399990)
chr1 (123-183)||(31436891-31436951)
[»] chr7 (23 HSPs)
chr7 (116-183)||(18157125-18157192)
chr7 (116-181)||(11070292-11070357)
chr7 (116-185)||(40693466-40693535)
chr7 (129-184)||(19510296-19510351)
chr7 (116-185)||(4678127-4678196)
chr7 (116-184)||(12102648-12102716)
chr7 (116-180)||(46148230-46148294)
chr7 (116-184)||(47192991-47193059)
chr7 (116-183)||(27688701-27688768)
chr7 (129-183)||(5978656-5978710)
chr7 (117-183)||(10591088-10591154)
chr7 (134-184)||(12141966-12142016)
chr7 (142-184)||(29162218-29162260)
chr7 (116-178)||(41910130-41910192)
chr7 (134-183)||(25940607-25940656)
chr7 (119-184)||(26041377-26041442)
chr7 (123-184)||(30180578-30180639)
chr7 (123-184)||(30862707-30862768)
chr7 (123-184)||(37351929-37351990)
chr7 (123-184)||(41254847-41254908)
chr7 (116-169)||(48522220-48522273)
chr7 (116-184)||(37392107-37392175)
chr7 (116-184)||(45607088-45607156)
[»] scaffold0003 (1 HSPs)
scaffold0003 (116-186)||(337182-337252)
[»] chr4 (40 HSPs)
chr4 (128-186)||(8455979-8456037)
chr4 (116-185)||(34027960-34028029)
chr4 (116-186)||(28676091-28676159)
chr4 (116-183)||(33438109-33438176)
chr4 (123-184)||(9162137-9162198)
chr4 (116-181)||(36947034-36947099)
chr4 (123-184)||(42915158-42915219)
chr4 (134-179)||(44170563-44170608)
chr4 (116-181)||(45678327-45678392)
chr4 (116-181)||(46309065-46309130)
chr4 (145-185)||(41609610-41609650)
chr4 (116-179)||(4878031-4878094)
chr4 (129-184)||(4896439-4896494)
chr4 (119-186)||(29949610-29949677)
chr4 (129-184)||(33776752-33776807)
chr4 (129-184)||(35017230-35017285)
chr4 (116-183)||(36364725-36364792)
chr4 (116-183)||(39880970-39881037)
chr4 (116-174)||(4511878-4511936)
chr4 (116-185)||(18874862-18874929)
chr4 (142-184)||(31048978-31049020)
chr4 (134-184)||(34116479-34116529)
chr4 (116-181)||(1987655-1987720)
chr4 (123-180)||(22257139-22257196)
chr4 (122-183)||(24209727-24209788)
chr4 (116-181)||(29577378-29577443)
chr4 (123-180)||(38844433-38844490)
chr4 (123-184)||(38952760-38952821)
chr4 (123-184)||(41952899-41952960)
chr4 (116-169)||(46791945-46791998)
chr4 (123-184)||(46911969-46912030)
chr4 (123-184)||(47998665-47998726)
chr4 (123-184)||(54036468-54036529)
chr4 (116-184)||(1031819-1031887)
chr4 (134-186)||(3223071-3223123)
chr4 (116-184)||(31221477-31221545)
chr4 (119-186)||(39449239-39449304)
chr4 (124-184)||(39844197-39844257)
chr4 (128-184)||(42854017-42854073)
chr4 (123-183)||(46794441-46794501)
[»] chr2 (43 HSPs)
chr2 (116-186)||(8352899-8352969)
chr2 (116-186)||(30856871-30856941)
chr2 (129-184)||(3959973-3960028)
chr2 (116-179)||(45202076-45202139)
chr2 (123-180)||(7086067-7086124)
chr2 (116-185)||(8555230-8555298)
chr2 (123-184)||(13104550-13104611)
chr2 (116-181)||(19523343-19523408)
chr2 (123-184)||(32750069-32750130)
chr2 (116-184)||(5067580-5067648)
chr2 (116-183)||(5167682-5167747)
chr2 (116-184)||(37631306-37631374)
chr2 (116-184)||(43725269-43725337)
chr2 (116-183)||(18508142-18508209)
chr2 (129-180)||(23344932-23344983)
chr2 (129-184)||(42081114-42081169)
chr2 (116-183)||(43057603-43057670)
chr2 (116-178)||(11442736-11442798)
chr2 (134-184)||(29893692-29893742)
chr2 (117-179)||(35705861-35705923)
chr2 (116-178)||(38027560-38027622)
chr2 (142-184)||(40371211-40371253)
chr2 (123-184)||(1889218-1889279)
chr2 (119-184)||(6851598-6851663)
chr2 (116-185)||(10749617-10749686)
chr2 (123-180)||(14714057-14714114)
chr2 (116-181)||(25094416-25094481)
chr2 (123-184)||(26321636-26321697)
chr2 (134-183)||(30413672-30413721)
chr2 (119-180)||(38021423-38021484)
chr2 (134-183)||(42283190-42283239)
chr2 (117-186)||(43621885-43621954)
chr2 (116-184)||(3585690-3585758)
chr2 (116-184)||(4263803-4263871)
chr2 (116-184)||(5455392-5455460)
chr2 (116-184)||(11126528-11126596)
chr2 (116-184)||(11229260-11229328)
chr2 (120-164)||(15820001-15820045)
chr2 (135-183)||(19668127-19668175)
chr2 (128-184)||(25801750-25801806)
chr2 (116-184)||(42251859-42251927)
chr2 (128-184)||(43650486-43650542)
chr2 (153-185)||(44059661-44059693)
[»] chr8 (36 HSPs)
chr8 (116-184)||(9000953-9001021)
chr8 (116-183)||(6005008-6005075)
chr8 (116-183)||(20994998-20995065)
chr8 (116-183)||(42026436-42026503)
chr8 (116-186)||(6849198-6849268)
chr8 (116-178)||(18550043-18550105)
chr8 (123-184)||(426172-426233)
chr8 (128-181)||(34247850-34247903)
chr8 (116-184)||(295610-295678)
chr8 (116-184)||(12960002-12960070)
chr8 (116-184)||(24946066-24946134)
chr8 (117-185)||(30578319-30578387)
chr8 (116-184)||(36524691-36524759)
chr8 (116-183)||(9985618-9985685)
chr8 (116-179)||(22203159-22203222)
chr8 (116-179)||(22836083-22836146)
chr8 (116-183)||(44380554-44380621)
chr8 (116-178)||(12045598-12045660)
chr8 (134-184)||(13884398-13884448)
chr8 (134-184)||(22767212-22767262)
chr8 (134-184)||(23258114-23258164)
chr8 (116-178)||(25430710-25430772)
chr8 (116-178)||(27300410-27300472)
chr8 (116-186)||(31665927-31665997)
chr8 (116-178)||(34838215-34838277)
chr8 (129-183)||(40719584-40719638)
chr8 (134-184)||(41293660-41293710)
chr8 (134-183)||(1796565-1796614)
chr8 (123-184)||(28473484-28473545)
chr8 (123-180)||(28927752-28927809)
chr8 (142-183)||(32725722-32725763)
chr8 (142-183)||(36740402-36740443)
chr8 (144-184)||(895999-896039)
chr8 (153-185)||(3206401-3206433)
chr8 (151-183)||(5782887-5782919)
chr8 (129-185)||(44068748-44068804)
[»] scaffold0184 (1 HSPs)
scaffold0184 (116-186)||(16531-16601)
[»] scaffold0078 (1 HSPs)
scaffold0078 (116-186)||(56243-56313)
[»] scaffold0002 (2 HSPs)
scaffold0002 (123-184)||(6498-6559)
scaffold0002 (122-183)||(440788-440849)
[»] scaffold0508 (1 HSPs)
scaffold0508 (116-184)||(11475-11543)
[»] scaffold0286 (1 HSPs)
scaffold0286 (116-179)||(17102-17165)
[»] scaffold0154 (2 HSPs)
scaffold0154 (116-183)||(4379-4445)
scaffold0154 (123-184)||(9787-9848)
[»] scaffold0592 (1 HSPs)
scaffold0592 (116-181)||(974-1039)
[»] scaffold0514 (1 HSPs)
scaffold0514 (123-184)||(1435-1496)
[»] scaffold0501 (1 HSPs)
scaffold0501 (123-180)||(10459-10516)
[»] scaffold0054 (1 HSPs)
scaffold0054 (123-184)||(31539-31600)
[»] scaffold0016 (1 HSPs)
scaffold0016 (116-185)||(204385-204454)


Alignment Details
Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 19563405 - 19563547
Alignment:
Q  42 tttttataatcatattttgtgacaacttttgaacaactcaactctgtctgatactttgaacaactctctatcggattatgttcttactctcgctcttcca 141  Q
    ||||||||||| |||||||||||||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19563405 tttttataatc-tattttgtgacaacttttgaacaactctt-tctttctgatactttgaacaactctctatcggattatgttcttactctcgctcttcca 19563502  T
Q  142 ttttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19563503 ttttctctgtctattgtttttgatcaattaaaagagagaaaaaga 19563547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 19563661 - 19563751
Alignment:
Q  181 aaaagatatcatcactatttcaagaataaaataagcaaaaaagtaaatgtatgtttggttcagcttttacgagaattgattttcagtaaat 271  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  19563661 aaaagataccatcactatttcaagaataaaataagcaaaaaagtaaatgtatgtttggtacagcttttacgagaattgattttaagtaaat 19563751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 11880994 - 11880924
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| | ||||||||||||||    
T  11880994 attatcttcttactctctctcttcctttttctctttccattgtttttgaccaatgagaagagagaaaaaga 11880924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 41210520 - 41210452
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| ||||||||||| ||||||| |||||||| |||||||||||||| |||| | |||||||||||||    
T  41210520 attatattcttactctctctcttcc-ttttctctctctattgtttttgaccaataagaagagagaaaaag 41210452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 91279 - 91346
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| ||||||||||| ||||||| |||||||| |  ||||||||||| |||| |||||||||||||    
T  91279 attatattcttactctctctcttcctttttctctcttcattgtttttgaccaatgaaaagagagaaaa 91346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 9636165 - 9636098
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| ||||||| ||| ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  9636165 attatattcttaccctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 9636098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 12891103 - 12891040
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||| |||||| |||| ||||||| |||||||| || |||||||||||||||| |||||||||    
T  12891103 attatcttcttattctctctcttcctttttctctttccattgtttttgatcaatgaaaagagag 12891040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 19437321 - 19437388
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||| |||||| ||||| | |||||||| |||||||||||||| |||| |||||||||||||    
T  19437321 attatattctgactctctctcttactttttctctctctattgtttttgaccaatcaaaagagagaaaa 19437388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 125163 - 125224
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||| ||| |||||||||||||| |||| ||||||||||||||    
T  125163 tcttattctctctcttcctttttttctctctattgtttttgaccaatgaaaagagagaaaaa 125224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 19376132 - 19376071
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  19376132 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 19376071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 34381083 - 34381144
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  34381083 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 34381144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 3960176 - 3960108
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||| ||||| | |||||||| || |||||||||||||||| |||||||| |||||    
T  3960176 attatattcttattctctctctttctttttctctctccattgtttttgatcaatgaaaagagaaaaaaa 3960108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 23647822 - 23647774
Alignment:
Q  228 tgtatgtttggttcagcttttacgagaattgattttcagtaaattgatt 276  Q
    ||||||||||||||||||||||||| ||||||||||  || ||||||||    
T  23647822 tgtatgtttggttcagcttttacgataattgattttgtgtgaattgatt 23647774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 23810751 - 23810799
Alignment:
Q  228 tgtatgtttggttcagcttttacgagaattgattttcagtaaattgatt 276  Q
    ||||||||||||||||||||||||| ||||||||||  || ||||||||    
T  23810751 tgtatgtttggttcagcttttacgataattgattttgtgtgaattgatt 23810799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 23991295 - 23991363
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| || |||||||| ||||||| |||||| | || ||||||||||| |||| ||||||||||||||    
T  23991295 attatatttttactctctctcttcctttttctttctcaattgtttttgaccaatgaaaagagagaaaaa 23991363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 25585463 - 25585403
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaaga 176  Q
    |||||||||||| |||  ||||||| |||||||| | ||||||||||||||||| ||||||    
T  25585463 attatgttcttattctttctcttcctttttctctctatattgtttttgatcaataaaaaga 25585403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 39595350 - 39595406
Alignment:
Q  128 ctctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  39595350 ctctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 39595406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 13734367 - 13734300
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| ||||||||||| || |||  |||||||| || ||||||||||| |||| |||||||||||||    
T  13734367 attatattcttactctctcttttcttttttctctctccattgtttttgaccaatgaaaagagagaaaa 13734300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 27340933 - 27340996
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||| |||||| |||| ||||||| |||||||| ||||||||||| || |||| |||||||||    
T  27340933 attatattcttattctctctcttcctttttctctctctattgttttggaccaataaaaagagag 27340996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 40566224 - 40566157
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||| |||| ||||||  |||||||| || ||||||||||| |||| |||||||||||||    
T  40566224 attatattcttattctctctcttcatttttctctctccattgtttttgaccaatgaaaagagagaaaa 40566157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 471904 - 471946
Alignment:
Q  142 ttttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| || |||||||||||||||| ||||||||||||||    
T  471904 ttttctctctccattgtttttgatcaatgaaaagagagaaaaa 471946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 6865785 - 6865727
Alignment:
Q  125 ttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||||||| ||||| | |||||||| || ||||||||||| |||| |||||||||||||    
T  6865785 ttactctctctctttctttttctctctccattgtttttgaccaatgaaaagagagaaaa 6865727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 8959230 - 8959292
Alignment:
Q  122 ttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||| |||| ||||| | |||||||| || ||||||||||| |||| ||||||||||||||    
T  8959230 ttcttattctctctctttctttttctctctccattgtttttgaccaataaaaagagagaaaaa 8959292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 16553586 - 16553636
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| || |||||||||||||||| |||||||| |||||    
T  16553586 ctcttcctttttctctctccattgtttttgatcaatcaaaagagataaaaa 16553636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 29803289 - 29803356
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| |||||||||||  |||||  |||||||| |||||||||||||| |||| | |||||||||||||    
T  29803289 attatattcttactctc--tcttcttttttctctctctattgtttttgaccaataataagagagaaaaag 29803356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 41192669 - 41192719
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  41192669 ctcttcctttttctctctccattgtttttgaccaatcaaaagagagaaaaa 41192719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 5005189 - 5005242
Alignment:
Q  128 ctctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    ||||| ||||||| |||||||| |||||||||||||| |||| | |||||||||    
T  5005189 ctctctctcttcctttttctctctctattgtttttgaccaatgataagagagaa 5005242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 5130378 - 5130317
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||| | |||| ||||||||||||||    
T  5130378 tcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaa 5130317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 11666250 - 11666311
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||| | |||||||| || ||||||||||| |||| ||||||||||||||    
T  11666250 tcttattctctctctttctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 11666311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 28811499 - 28811560
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||  |||||||| || ||||||||||| |||| ||||||||||||||    
T  28811499 tcttattctctctcttcttttttctctctccattgtttttgaccaatgaaaagagagaaaaa 28811560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 12718387 - 12718327
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaaga 176  Q
    |||||||| ||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||    
T  12718387 attatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaaga 12718327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 12779613 - 12779553
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaaga 176  Q
    |||||||| ||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||    
T  12779613 attatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaaga 12779553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 35098739 - 35098671
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| ||||||||||  ||||||  |||||||| || ||| ||||||||||||||||| | |||||||    
T  35098739 attatattcttactctttctcttcatttttctctctccattatttttgatcaattaaaaaaaagaaaaa 35098671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 41460180 - 41460248
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||| ||||||  |||||||| || ||||||||| | |||| ||||||||||||||    
T  41460180 attatattcttattctctctcttcatttttctctctccattgtttttaaccaatgaaaagagagaaaaa 41460248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 32729953 - 32730023
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||||| ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||    
T  32729953 attatattcttactctctctcttcctttttctctctctattgtttttgatcaatgaaaagagagaaaaaga 32730023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 16743273 - 16743205
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| | ||||||||||||    
T  16743273 attatattcttactctctctcttcctttttctctctcaattgtttttgaccaatgagaagagagaaaaa 16743205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 3339488 - 3339438
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| |||||||||||||| |||| ||||||||||||||    
T  3339488 ctcttcctttttctctctctattgtttttgaccaataaaaagagagaaaaa 3339438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 21857576 - 21857508
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||||| | |||| ||||| | |||||||| ||||||  ||||||||||| ||||||||||||||    
T  21857576 attatgttctaattctctctctttctttttctctctctattaattttgatcaataaaaagagagaaaaa 21857508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 2165307 - 2165244
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||    
T  2165307 attatcttcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagag 2165244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 2176940 - 2176877
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||    
T  2176940 attatcttcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagag 2176877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 11742973 - 11742922
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||||| |||||||| |||||||||||||| |||| | |||||||||||||    
T  11742973 ctcttcctttttctctctctattgtttttgaccaatgagaagagagaaaaag 11742922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 2582752 - 2582794
Alignment:
Q  142 ttttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| || |||||||||||||||| ||||||||||||||    
T  2582752 ttttctctctccattgtttttgatcaatgaaaagagagaaaaa 2582794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 16533258 - 16533200
Alignment:
Q  125 ttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||||||| ||||||| |||||||| || ||||||||| | |||| |||||||||||||    
T  16533258 ttactctctctcttcctttttctctctccattgttttttaccaatgaaaagagagaaaa 16533200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 32457252 - 32457191
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| |||| |||||||||    
T  32457252 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaaaagagaaaaa 32457191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 34490411 - 34490480
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| ||||||||||  ||||| | |||||||| || ||| ||||||| |||| |||||||||||||||    
T  34490411 attatattcttactctttctcttactttttctctctccattatttttgaccaatgaaaagagagaaaaag 34490480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 14094975 - 14095043
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| | || |||| || |||||||| ||||||| ||||||||||| |||| |||||||||    
T  14094975 attatattcttattatctctctacctttttctctctctattgattttgatcaatcaaaatagagaaaaa 14095043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 37303454 - 37303515
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| ||||||||||||||||||| ||||||||||||||    
T  37303454 tcttattctccctcttcctttttctctctctattgtttttgatcaatgaaaagagagaaaaa 37303515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 1901933 - 1901866
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  1901933 attatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 1901866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 1911379 - 1911312
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  1911379 attatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 1911312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 13724417 - 13724350
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||| |||| |||||||||||||||| ||| || ||||||| ||||||||||||||||||    
T  13724417 attattttcttaatctctctcttccattttctctctctgttatttttgaccaattaaaagagagaaaa 13724350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 1295396 - 1295466
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||||| || |||| |||||||| |||||||||||||| |||| |||||| |||||||||    
T  1295396 attatattcttactctctctgttcctttttctctctctattgtttttgaccaatgaaaagatagaaaaaga 1295466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 37710468 - 37710538
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| |||||||| || ||||||| |||||||| |||||| ||||||| |||| ||||||||||||||||    
T  37710468 attatcttcttactatctctcttcctttttctctctctattatttttgaccaataaaaagagagaaaaaga 37710538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 8066426 - 8066487
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  8066426 tcttactctccctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 8066487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 36869844 - 36869780
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| ||||||||||    
T  36869844 attatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 36869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 462407 - 462341
Alignment:
Q  117 ttatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||| |||||| |||| ||||||| |||||||| || ||||||||| |||||| |||||||||||||    
T  462407 ttatattcttattctctctcttcctttttctctatccattgttttttatcaatgaaaagagagaaaa 462341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 33007431 - 33007492
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  33007431 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 33007492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 41717328 - 41717397
Alignment:
Q  117 ttatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    |||| ||||||||||| | | ||| |||||||| || ||||||||||| |||| ||||||||||||||||    
T  41717328 ttatattcttactctctcgcctcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaga 41717397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 46473199 - 46473260
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  46473199 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 46473260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 20549392 - 20549321
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaagata 188  Q
    ||||| |||||| |||| ||||| | |||||||| |||||||||||||| |||| |||||||| |||||||||    
T  20549392 attatcttcttattctctctctttctttttctctctctattgtttttgaccaataaaaagaga-aaaaagata 20549321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 34208331 - 34208399
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| ||| |||| ||||||  |||||||| |||||||||||| |||||| | ||||||||||||    
T  34208331 attatgtttttattctctctcttcatttttctctctctattgtttttaatcaatgagaagagagaaaaa 34208399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 35554115 - 35554055
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  35554115 tcttattctccctcttcctttttctctttccattgtttttgaccaatgaaaagagagaaaa 35554055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 36365036 - 36364992
Alignment:
Q  228 tgtatgtttggttcagcttttacgagaattgattttcagtaaatt 272  Q
    ||||||||||||||||||||||| | |||||||||| ||||||||    
T  36365036 tgtatgtttggttcagcttttacaataattgattttgagtaaatt 36364992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 16295546 - 16295593
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    ||||||| |||||||| |||||||||||||| |||| |||||||||||    
T  16295546 ctcttcctttttctctctctattgtttttgaccaataaaaagagagaa 16295593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 25959549 - 25959482
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| || ||||| || ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  25959549 attatatttttactatctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 25959482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 35368675 - 35368738
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||| | |||| |||||||||    
T  35368675 attatcttcttattctctctcttcctttttctctctctattgttttttaccaatgaaaagagag 35368738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 186
Target Start/End: Complemental strand, 50294104 - 50294061
Alignment:
Q  143 tttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||||| || |||||||||||||||| ||||||||||||||||    
T  50294104 tttctctttccattgtttttgatcaatgaaaagagagaaaaaga 50294061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 50745613 - 50745676
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||    
T  50745613 attatcttcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagag 50745676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 7221 - 7151
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||  ||| ||||||| |||||||| || ||||||||||| |||| |||| |||||||||||    
T  7221 attatattcttatcctctctcttcctttttctctctccattgtttttgaccaataaaaaaagagaaaaaga 7151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 14839052 - 14838990
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    ||||| |||||| |||| || |||| |||||||| |||||||||||||| |||| ||||||||    
T  14839052 attatcttcttattctctcttttcctttttctctctctattgtttttgaccaataaaaagaga 14838990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 25142710 - 25142760
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| || ||||||||||| |||||||||||||| ||||    
T  25142710 ctcttcctttttctctctccattgtttttgaccaattaaaagagaggaaaa 25142760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 32656048 - 32656106
Alignment:
Q  125 ttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||||||| ||||||| |||||||| || ||||||||||| |||| |||||| ||||||    
T  32656048 ttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagaaagaaaa 32656106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 32795913 - 32795967
Alignment:
Q  129 tctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||| ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  32795913 tctctctcttcctttttctctctccattgtttttgaccaataaaaagagagaaaa 32795967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 34021452 - 34021402
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| |||||||||||||| |||| | ||||||||||||    
T  34021452 ctcttcctttttctctctctattgtttttgaccaataagaagagagaaaaa 34021402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 35272109 - 35272159
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  35272109 ctcttcctttttctctctccattgtttttgaccaataaaaagagagaaaaa 35272159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 37215220 - 37215170
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  37215220 ctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 37215170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 42865037 - 42864975
Alignment:
Q  120 tgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaa 182  Q
    ||||||||  ||| ||||||| |||||||| |||||||||||||| |||| | ||||||||||    
T  42865037 tgttcttatcctctctcttcctttttctctttctattgtttttgaccaataagaagagagaaa 42864975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 44689867 - 44689929
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    ||||| |||||| |||| ||||||  |||||||| |||||||||||||| |||| ||||||||    
T  44689867 attatcttcttattctctctcttcttttttctctctctattgtttttgaccaataaaaagaga 44689929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 1834570 - 1834623
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaat 169  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||||| ||||    
T  1834570 attatattcttattctctctcttcctttttctctctctattgtttttgaccaat 1834623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 6126525 - 6126586
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||| | |||| ||||||||||||||    
T  6126525 tcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaa 6126586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 21481828 - 21481893
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    ||||| |||||| |||| ||||||| |||||| | |||||||||||||| |||| | |||||||||    
T  21481828 attatcttcttattctctctcttcctttttctgtctctattgtttttgaccaatgagaagagagaa 21481893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 25559768 - 25559833
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    |||||||| ||| ||||  |||||  |||||||| ||||||||||||||||||| | |||||||||    
T  25559768 attatgtttttattctctatcttcatttttctctctctattgtttttgatcaatgagaagagagaa 25559833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 28269877 - 28269938
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||| |||||||    
T  28269877 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagatagaaaaa 28269938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 28300627 - 28300586
Alignment:
Q  142 ttttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||||||| |||||||||||||| |||| |||||||||||||    
T  28300627 ttttctctctctattgtttttgaccaatgaaaagagagaaaa 28300586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 39604234 - 39604185
Alignment:
Q  135 tcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  39604234 tcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 39604185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 184
Target Start/End: Original strand, 42102300 - 42102369
Alignment:
Q  115 gattatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| |||| | |||||||    
T  42102300 gattatattcttattctctctcttcctttttctctctccattgtttttgaccaataaaaaaaaagaaaaa 42102369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 53102902 - 53102841
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||| ||| || |||||||||||||||| | ||||||||||||    
T  53102902 tcttattctctctcttcctttttttctctccattgtttttgatcaataagaagagagaaaaa 53102841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 18181507 - 18181572
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||||||||  |||||| |||||||| ||||||| ||| || |||| |||||||||||||    
T  18181507 attatattcttactctc--tcttcctttttctctctctattggtttagaccaatgaaaagagagaaaa 18181572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 32687967 - 32687899
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||| ||||||  |||||||| || ||||||||| | |||| ||||||||||||||    
T  32687967 attatcttcttattctctctcttcatttttctctctccattgtttttaaccaatgaaaagagagaaaaa 32687899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 36799462 - 36799530
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||  ||||| | |||||||| || ||||||||||| |||| ||||||||||||||    
T  36799462 attatattcttattctacctctttctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 36799530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 49457629 - 49457697
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| || |||||| | ||||||  |||||||| || ||||||||||| |||| ||||||||||||||    
T  49457629 attatatttttactccctctcttcatttttctctctccattgtttttgaccaatgaaaagagagaaaaa 49457697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 40596061 - 40595993
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  40596061 attatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 40595993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 25098795 - 25098728
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  25098795 attatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 25098728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 27352694 - 27352761
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  27352694 attatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 27352761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 4604593 - 4604663
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||| ||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||||    
T  4604593 attatattcttacgctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaga 4604663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 50528064 - 50527994
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| |||||||||||  |||||| |||||||| || ||||||||||| |||| ||||||||||||||||    
T  50528064 attatattcttactctctttcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaaga 50527994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 16987511 - 16987580
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| ||||||||||| ||||| | |||||||| || ||||||||||| |||| |||||||||||||||    
T  16987511 attatattcttactctctctctttctttttctctctccattgtttttgaccaatgaaaagagagaaaaag 16987580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 47059897 - 47059829
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  47059897 attatattcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 47059829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 36930761 - 36930693
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||||| ||||||| ||||||||  | ||||||||||| |||| ||||||||||||||||    
T  36930761 attatattcttactctctctcttcctttttctct--ccattgtttttgaccaataaaaagagagaaaaaga 36930693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 25061797 - 25061867
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||||  ||||||| |||||||| || ||||||||| | |||| ||||||||||||||||    
T  25061797 attatattcttactctttctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaaga 25061867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 51339698 - 51339640
Alignment:
Q  125 ttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||||||| ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  51339698 ttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 51339640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 2827717 - 2827652
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    |||||||| ||| |||| ||||||| |||||||| |||||||||||||| |||| | |||||||||    
T  2827717 attatgtttttattctctctcttcctttttctctctctattgtttttgaccaataagaagagagaa 2827652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 17167913 - 17167978
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||| | |||| |||||||||||    
T  17167913 attatcttcttattctctctcttcctttttctctctctattgttttttaccaatgaaaagagagaa 17167978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 39010885 - 39010946
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  39010885 tcttattctccctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 39010946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 48325286 - 48325355
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| || |||||||| ||||||| |||||||| || ||||||||||| |||| | |||||||||||||    
T  48325286 attatatttttactctctctcttcctttttctctctccattgtttttgaccaatgagaagagagaaaaag 48325355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 15182590 - 15182522
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||  ||| |||||||||||| |||||||| |||||||||||||| |||| | | ||||||||||    
T  15182590 attatgtatttattctcgctcttcctttttctctctctattgtttttgaccaatcataggagagaaaaa 15182522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 32966331 - 32966399
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||| ||||| | |||||||| || ||||||||||| |||| ||||||||||||||    
T  32966331 attatattcttaatctccctctttctttttctctctccattgtttttgaccaataaaaagagagaaaaa 32966399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 49425801 - 49425869
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||| | |||| ||||||||||||||    
T  49425801 attattttcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaa 49425869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 50460719 - 50460659
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaaga 176  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||||| |||| ||||||    
T  50460719 attatcttcttattctctctcttcctttttctctctctattgtttttgaccaataaaaaga 50460659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 19651477 - 19651541
Alignment:
Q  119 atgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||||||| |||| ||||||| ||||||||  | ||||||||||| |||| |||||||||||||||    
T  19651477 atgttcttattctctctcttcctttttctct--ccattgtttttgaccaataaaaagagagaaaaag 19651541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 20288345 - 20288278
Alignment:
Q  117 ttatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| ||| |||| ||||||| |||||||| || ||| |||||||||||| ||||| ||||||||    
T  20288345 ttatgtttttattctctctcttcctttttctctctccattatttttgatcaataaaaagtgagaaaaa 20288278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 24775039 - 24775106
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| ||||||||||| ||||||| |||||| | ||||||||||| || |||| | |||||||||||    
T  24775039 attatattcttactctctctcttcctttttctttatctattgttttggaccaatgagaagagagaaaa 24775106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 35846325 - 35846258
Alignment:
Q  117 ttatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| ||| |||| ||||||| |||||||| || ||||||||||| |||| ||||| ||||||||    
T  35846325 ttatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaa 35846258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 6841855 - 6841925
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    |||||||| ||| | || ||||||  |||||||| || ||||||||||| |||| ||||||||||||||||    
T  6841855 attatgtttttattatctctcttcttttttctctctccattgtttttgaccaataaaaagagagaaaaaga 6841925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 7203833 - 7203783
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| |||||||||||||| ||||  |||||||||||||    
T  7203833 ctcttcctttttctctctctattgtttttgaccaatagaaagagagaaaaa 7203783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 10121853 - 10121895
Alignment:
Q  144 ttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    |||||| ||||||||||||||||||| | ||||||||||||||    
T  10121853 ttctctttctattgtttttgatcaataagaagagagaaaaaga 10121895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 25302634 - 25302584
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| |||||||||||| | |||| ||||||||||||||    
T  25302634 ctcttcctttttctctctctattgtttttaaccaatgaaaagagagaaaaa 25302584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 25988991 - 25988924
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| ||||||||||| ||||||| |||||||  || ||||||||||| |||| |||| ||||||||||    
T  25988991 attatattcttactctctctcttcctttttctc--tccattgtttttgaccaataaaaaaagagaaaaag 25988924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 25995542 - 25995592
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  25995542 ctcttcctttttctctctccattgtttttgaccaataaaaagagagaaaaa 25995592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 43196093 - 43196031
Alignment:
Q  119 atgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    ||||| ||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||||    
T  43196093 atgttgttattctctctcttcctttttctctctccattgtttttgaccaatcaaaagagagaa 43196031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 43612087 - 43612024
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    ||||| |||||||||||  |||||| |||||||| || ||||||||||| |||| |||||||||||    
T  43612087 attatattcttactctc--tcttcctttttctctctccattgtttttgaccaatgaaaagagagaa 43612024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 48872452 - 48872510
Alignment:
Q  125 ttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||||||  |||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  48872452 ttactctctttcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 48872510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 48962050 - 48962112
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||||| |||| | ||||||    
T  48962050 attatcttcttattctctctcttcctttttctctctctattgtttttgaccaataagaagaga 48962112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 21255792 - 21255723
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| |||||||| || ||||| | |||||||| || ||||||||||| |||| | |||||||||||||    
T  21255792 attatattcttactttctctctttctttttctctctccattgtttttgaccaatgagaagagagaaaaag 21255723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 28253086 - 28253143
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||    
T  28253086 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 28253143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 37947227 - 37947162
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| | |||||||||    
T  37947227 attatcttcttattctctctcttcctttttctctctccattgtttttgaccaatgagaagagagaa 37947162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 40610300 - 40610357
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||    
T  40610300 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 40610357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 46903534 - 46903599
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    |||||||| ||| |||| |||| || |||||||| |||||||||||||| |||| | |||||||||    
T  46903534 attatgtttttattctctctctacctttttctctctctattgtttttgaccaatgagaagagagaa 46903599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 578874 - 578930
Alignment:
Q  122 ttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    |||||| |||| ||||||  |||||||| |||||||||||||| |||| ||||||||    
T  578874 ttcttattctctctcttcatttttctctctctattgtttttgaccaataaaaagaga 578930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 17526484 - 17526552
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||| ||||||  |||||||| || ||| ||||||| |||| ||||||||||||||    
T  17526484 attatattcttattctctctcttcatttttctctctccattatttttgaccaataaaaagagagaaaaa 17526552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 23399990 - 23399934
Alignment:
Q  122 ttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    |||||| |||| ||||||| |||||||| |||||||||||||| |||| | ||||||    
T  23399990 ttcttattctctctcttcctttttctctttctattgtttttgaccaataagaagaga 23399934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 31436891 - 31436951
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||| ||||    
T  31436891 tcttattctccctcttcctttttctctctccattgtttttgaccaatgaaaagagaaaaaa 31436951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 18157192 - 18157125
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  18157192 attatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 18157125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 11070292 - 11070357
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    |||||||||||| |||| |||| || |||||||| |||||||||||||| |||| |||||||||||    
T  11070292 attatgttcttattctctctctacctttttctctctctattgtttttgaccaatgaaaagagagaa 11070357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 40693535 - 40693466
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| || |||||||| ||||||| |||||||| |||||||||||||| |||| | |||||||||||||    
T  40693535 attatatttttactctctctcttcctttttctctctctattgtttttgaccaatgagaagagagaaaaag 40693466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 19510351 - 19510296
Alignment:
Q  129 tctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||| ||||||| |||||||| || |||||||||||||||| ||||||||||||||    
T  19510351 tctccctcttcctttttctctctccattgtttttgatcaatgaaaagagagaaaaa 19510296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 4678127 - 4678196
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| ||||||||||| ||| ||| |||||||| || ||||||||||| |||| |||| ||||||||||    
T  4678127 attatattcttactctctctcatcctttttctctctccattgtttttgaccaatgaaaatagagaaaaag 4678196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 12102716 - 12102648
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||| | |||| ||||||||||||||    
T  12102716 attatcttcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaa 12102648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 46148230 - 46148294
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||    
T  46148230 attatattcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 46148294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 47192991 - 47193059
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| ||| |||| ||||||| |||||||| || ||||||||||| |||| ||||| ||||||||    
T  47192991 attatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaa 47193059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 27688701 - 27688768
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||||| || ||||| | |||||||| || ||||||||||| |||| |||||||||||||    
T  27688701 attatattcttactatctctctttctttttctctctccattgtttttgaccaatgaaaagagagaaaa 27688768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 5978656 - 5978710
Alignment:
Q  129 tctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||| ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  5978656 tctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 5978710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 10591154 - 10591088
Alignment:
Q  117 ttatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||||| ||| | || ||||||| |||||||| ||||||||||||||||||| | || ||||||||    
T  10591154 ttatgtttttattatctctcttcctttttctctctctattgtttttgatcaataagaatagagaaaa 10591088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 12141966 - 12142016
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| |||||||||||||| |||| |||||| |||||||    
T  12141966 ctcttcctttttctctttctattgtttttgaccaatgaaaagaaagaaaaa 12142016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 29162260 - 29162218
Alignment:
Q  142 ttttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| || |||||||||||||||| ||||||||||||||    
T  29162260 ttttctctctccattgtttttgatcaataaaaagagagaaaaa 29162218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 41910192 - 41910130
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||||| |||| | ||||||    
T  41910192 attatcttcttattctctctcttcctttttctctctctattgtttttgaccaataagaagaga 41910130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 25940656 - 25940607
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  25940656 ctcttcctttttctctctcaattgtttttgaccaatgaaaagagagaaaa 25940607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 26041377 - 26041442
Alignment:
Q  119 atgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||||| |||| ||||||| |||| ||| || ||||||||||| |||| | ||||||||||||    
T  26041377 atgttcttattctctctcttcctttttttctctccattgtttttgaccaataagaagagagaaaaa 26041442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 30180578 - 30180639
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| | || ||||||||||||||    
T  30180578 tcttattctctctcttcctttttctctctccattgtttttgacccatgaaaagagagaaaaa 30180639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 30862707 - 30862768
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||| ||||||| |||| ||||||||||||||    
T  30862707 tcttattctctctcttcctttttctctctccattatttttgaccaataaaaagagagaaaaa 30862768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 37351990 - 37351929
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||  |||||||| || ||||||||||| |||| ||||||||||||||    
T  37351990 tcttattctctctcttcttttttctctctccattgtttttgaccaataaaaagagagaaaaa 37351929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 41254847 - 41254908
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| ||||| || |||||||||||| | |||| ||||||||||||||    
T  41254847 tcttattctctctcttcctttttccctctctattgtttttaaccaatgaaaagagagaaaaa 41254908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 48522220 - 48522273
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaat 169  Q
    |||||||| ||| |||| ||||||| |||||||| |||||||||||||| ||||    
T  48522220 attatgttattattctctctcttcctttttctctctctattgtttttgaccaat 48522273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 37392107 - 37392175
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| | || ||||||| |||||||| || ||||||||| | |||| ||||||||||||||    
T  37392107 attatattcttattttctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaa 37392175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 45607088 - 45607156
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| ||| || | ||||||| |||||||| || ||||||||||| |||| ||||| ||||||||    
T  45607088 attatgtttttattcactctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaa 45607156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 337182 - 337252
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| |||| |||||||||||    
T  337182 attatattcttactctctctcttcctttttctctctccattgtttttgaccaataaaaaaagagaaaaaga 337252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 8455979 - 8456037
Alignment:
Q  128 ctctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||| |||||||| |||||||||||||| |||| ||||||||||||||||    
T  8455979 ctctctctcttcctttttctctctctattgtttttgaccaataaaaagagagaaaaaga 8456037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 34027960 - 34028029
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| | |||||||||||||    
T  34027960 attatattcttactctctctcttcctttttctctctccattgtttttgaccaatgagaagagagaaaaag 34028029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 28676159 - 28676091
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||||| ||||||| ||||||||  | ||||||||||| |||| ||||||||||||||||    
T  28676159 attatattcttactctctctcttcctttttctct--ccattgtttttgaccaatgaaaagagagaaaaaga 28676091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 33438109 - 33438176
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| ||||||||||| |||||   |||||||| |||||||||||||| |||| |||||||||||||    
T  33438109 attatattcttactctctctctttatttttctctctctattgtttttgaccaataaaaagagagaaaa 33438176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 9162137 - 9162198
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  9162137 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 9162198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 36947099 - 36947034
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    |||||||| ||| |||| |||| |  |||||||| ||||||||||||||||||| |||||||||||    
T  36947099 attatgtttttattctctctctacatttttctctctctattgtttttgatcaataaaaagagagaa 36947034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 42915219 - 42915158
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| |||||||||||| | |||| ||||||||||||||    
T  42915219 tcttattctctctcttcctttttctctttctattgtttttaaccaatgaaaagagagaaaaa 42915158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 44170608 - 44170563
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||    
T  44170608 ctcttcctttttctctgtcaattgtttttgatcaatcaaaagagag 44170563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 45678327 - 45678392
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||||    
T  45678327 attatcttcttattctctctcttcctttttctctctccattgtttttgaccaataaaaagagagaa 45678392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 46309130 - 46309065
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    |||||||| ||| |||| ||||| | |||||||| |||||||||||||| |||| |||||||||||    
T  46309130 attatgtttttattctctctctttctttttctctctctattgtttttgaccaatgaaaagagagaa 46309065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 41609650 - 41609610
Alignment:
Q  145 tctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| |||||||||||||| ||||||||||||||||||||    
T  41609650 tctctctctattgtttttgaccaattaaaagagagaaaaag 41609610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 4878031 - 4878094
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||    
T  4878031 attatcttcttattctctctcttcctttttctctttccattgtttttgaccaatgaaaagagag 4878094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 4896494 - 4896439
Alignment:
Q  129 tctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  4896494 tctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 4896439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 29949677 - 29949610
Alignment:
Q  119 atgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    |||||||||  ||| ||||||| |||||||| |||||||||||| | |||| | ||||||||||||||    
T  29949677 atgttcttatcctctctcttcctttttctctatctattgttttttaccaataagaagagagaaaaaga 29949610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 33776807 - 33776752
Alignment:
Q  129 tctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||| ||||||| |||||||| |||||||||||||| |||||||| || |||||||    
T  33776807 tctctctcttcctttttctctttctattgtttttgaccaattaaatgaaagaaaaa 33776752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 35017230 - 35017285
Alignment:
Q  129 tctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||| ||||||| |||||||| || |||| ||||||||||| ||||||||||||||    
T  35017230 tctctctcttcctttttctctctccattgattttgatcaatgaaaagagagaaaaa 35017285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 36364792 - 36364725
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||| |||| ||||||| |||||||  |||||||||||||| |||| | |||||||||||    
T  36364792 attatcttcttattctctctcttcctttttctccctctattgtttttgaccaataagaagagagaaaa 36364725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 39881037 - 39880970
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||| |||| ||||||  |||||||| |||||| ||||||| |||| |||||||||||||    
T  39881037 attatcttcttattctctctcttcatttttctctctctattatttttgaccaatcaaaagagagaaaa 39880970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 4511878 - 4511936
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaa 174  Q
    ||||| |||||| |||| ||||||| || ||||| ||||||||||||||||||| ||||    
T  4511878 attatattcttattctctctcttcctttctctctttctattgtttttgatcaatgaaaa 4511936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 18874929 - 18874862
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| |||||||||||  |||||| |||||||| || ||||||||||| |||| | |||||||||||||    
T  18874929 attatattcttactctc--tcttcctttttctctctccattgtttttgaccaatgagaagagagaaaaag 18874862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 31048978 - 31049020
Alignment:
Q  142 ttttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| || |||||||||||||||| ||||||||||||||    
T  31048978 ttttctctctccattgtttttgatcaatcaaaagagagaaaaa 31049020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 34116529 - 34116479
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| || ||||||||||||| || ||||||||||||||    
T  34116529 ctcttcctttttctctctccattgtttttgatcgatgaaaagagagaaaaa 34116479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 1987720 - 1987655
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    |||||||| ||| |||| |||| || |||||||| || ||||||||||| |||| |||||||||||    
T  1987720 attatgtttttattctctctctacctttttctctctccattgtttttgaccaatgaaaagagagaa 1987655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 22257196 - 22257139
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    ||||| |||| ||||||| |||||||| |||||||||||| | |||| ||||||||||    
T  22257196 tcttattctctctcttcctttttctctctctattgtttttaaccaatgaaaagagaga 22257139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 24209788 - 24209727
Alignment:
Q  122 ttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||||||||| ||||| | |||||||| || ||||||||||| |||| ||| |||||||||    
T  24209788 ttcttactctctctctttctttttctctttccattgtttttgaccaatgaaatgagagaaaa 24209727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 29577443 - 29577378
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    ||||| |||||| |||| ||||||  |||||||| || ||||||||||| |||| |||||||||||    
T  29577443 attatcttcttattctctctcttcatttttctctctccattgtttttgaccaatgaaaagagagaa 29577378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 38844490 - 38844433
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    ||||| |||| ||||||  |||||||| |||||||||||||| |||| ||||||||||    
T  38844490 tcttattctccctcttcttttttctctctctattgtttttgaccaatgaaaagagaga 38844433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 38952760 - 38952821
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| |||| |||||||||    
T  38952760 tcttattctccctcttcctttttctctctccattgtttttgaccaatgaaaaaagagaaaaa 38952821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 41952899 - 41952960
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||| | |||||||| || ||||||||| |||||| ||||||||||||||    
T  41952899 tcttattctctctctttctttttctctctccattgtttttaatcaatgaaaagagagaaaaa 41952960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 46791998 - 46791945
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaat 169  Q
    ||||| |||||| | || ||||||| |||||||| |||||||||||||||||||    
T  46791998 attatcttcttattatctctcttcctttttctctctctattgtttttgatcaat 46791945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 46911969 - 46912030
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||||| ||||||  |||||| | || ||||||||||| |||| ||||||||||||||    
T  46911969 tcttactctccctcttcatttttctttctcaattgtttttgaccaatgaaaagagagaaaaa 46912030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 47998665 - 47998726
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||| |||||||    
T  47998665 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagaaagaaaaa 47998726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 54036529 - 54036468
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||| | |||| ||||||||||||||    
T  54036529 tcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaa 54036468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 1031819 - 1031887
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| ||| |||| ||||| | |||||||| || ||||||||||| |||| ||||| ||||||||    
T  1031819 attatgtttttattctctctctttctttttctctctccattgtttttgaccaatgaaaagtgagaaaaa 1031887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 3223071 - 3223123
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||||| |||||||| || ||||||||||| |||| | ||||||||||||||    
T  3223071 ctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaaga 3223123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 31221477 - 31221545
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||| |||||  ||| ||||||| |||||||| || ||||||||||| |||| | ||||||||||||    
T  31221477 attatggtcttatcctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaa 31221545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 39449239 - 39449304
Alignment:
Q  119 atgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||||||| |||| ||| |||||||| |||  | ||||||||||| |||| ||||||||||||||||    
T  39449239 atgttcttattctctctcatccattttttct--caattgtttttgaccaataaaaagagagaaaaaga 39449304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 39844257 - 39844197
Alignment:
Q  124 cttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||| |||| || |||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  39844257 cttattctctctattcctttttctctctccattgtttttgaccaataaaaagagagaaaaa 39844197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 42854017 - 42854073
Alignment:
Q  128 ctctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| ||||||| |||||||| |||||||||||||| | || | ||||||||||||    
T  42854017 ctctctctcttcctttttctctctctattgtttttgaccgatgagaagagagaaaaa 42854073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 46794501 - 46794441
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||| ||||    
T  46794501 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaaaaaa 46794441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 8352899 - 8352969
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||||| ||||||| |||||||| || | |||||||||||||| | ||||||||||||||    
T  8352899 attatattcttactctctctcttcctttttctctctccagtgtttttgatcaatgagaagagagaaaaaga 8352969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 30856871 - 30856941
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||| | ||||||| |||||||| || ||||||||||| |||| ||||||||||||||||    
T  30856871 attatattcttactcactctcttcctttttctctatccattgtttttgaccaatgaaaagagagaaaaaga 30856941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 3959973 - 3960028
Alignment:
Q  129 tctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||| ||||||| |||||||| || |||||||||||||||| ||||||||||||||    
T  3959973 tctctctcttcctttttctctctccattgtttttgatcaatgaaaagagagaaaaa 3960028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 45202139 - 45202076
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||| |||||| |||| ||||||| |||||||| || |||||||||||||||| |||||||||    
T  45202139 attatcttcttattctctctcttcctttttctctctccattgtttttgatcaatgaaaagagag 45202076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 7086124 - 7086067
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    ||||| |||| ||||||| |||||||| |||||||||||||| |||| ||||||||||    
T  7086124 tcttattctccctcttcctttttctctctctattgtttttgaccaatgaaaagagaga 7086067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 8555298 - 8555230
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| ||||||||||| ||||||  |||| ||| || |||||||||||||||| |||||||||||||||    
T  8555298 attatattcttactctctctcttctttttt-tctctccattgtttttgatcaatgaaaagagagaaaaag 8555230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 13104550 - 13104611
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  13104550 tcttattctcactcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 13104611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 181
Target Start/End: Complemental strand, 19523408 - 19523343
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||||    
T  19523408 attatcttcttattctctctcttcctttttctctctccattgtttttgaccaataaaaagagagaa 19523343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 32750069 - 32750130
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  32750069 tcttattctccctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 32750130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 5067648 - 5067580
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| ||| |||| ||||||| |||||||| || ||||||||||| |||| ||||| ||||||||    
T  5067648 attatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaa 5067580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 5167747 - 5167682
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||||||||  |||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  5167747 attatattcttactctc--tcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 5167682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 37631374 - 37631306
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| ||||||||||| ||||| | |||||||| || ||||||||||| |||| | ||||||||||||    
T  37631374 attatattcttactctctctctttctttttctctctccattgtttttgaccaatgagaagagagaaaaa 37631306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 43725269 - 43725337
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| ||| |||| ||||||| |||||||| || ||||||||||| |||| ||||| ||||||||    
T  43725269 attatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaa 43725337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 18508142 - 18508209
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||||| |||| ||||  |||||||    
T  18508142 attatcttcttattctctctcttcctttttctctctctattgtttttgaccaataaaaaaggagaaaa 18508209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 23344983 - 23344932
Alignment:
Q  129 tctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    |||| ||||||| |||||||| |||||||||||||| |||| ||||||||||    
T  23344983 tctctctcttcctttttctctctctattgtttttgaccaatgaaaagagaga 23344932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 42081114 - 42081169
Alignment:
Q  129 tctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||| ||||||| |||||||| |||||||||||||| |||| |||| |||||||||    
T  42081114 tctctctcttcctttttctctctctattgtttttgaccaatgaaaatagagaaaaa 42081169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 43057670 - 43057603
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||| |||| ||||||  |||||||| |||||| ||||||| |||| |||||||||||||    
T  43057670 attatcttcttattctctctcttcttttttctctctctattatttttgaccaatcaaaagagagaaaa 43057603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 11442736 - 11442798
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    ||||| |||||| |||| ||||||| |||||||| ||||||||||| || |||| ||||||||    
T  11442736 attatattcttattctccctcttcctttttctctctctattgttttggaccaatgaaaagaga 11442798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 29893692 - 29893742
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| || |||||||||||||||| | ||||||||||||    
T  29893692 ctcttcctttttctctctccattgtttttgatcaataagaagagagaaaaa 29893742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 35705923 - 35705861
Alignment:
Q  117 ttatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    |||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||    
T  35705923 ttatcttcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagag 35705861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 38027622 - 38027560
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||||| |||| | ||||||    
T  38027622 attatcttcttattctctctcttcctttttctctctctattgtttttgaccaataagaagaga 38027560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 40371211 - 40371253
Alignment:
Q  142 ttttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| |||||| ||||||| |||||||||||||||||||    
T  40371211 ttttctctctctattatttttgaccaattaaaagagagaaaaa 40371253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 1889218 - 1889279
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| ||||||||  | ||||||||||| |||| ||||||||||||||    
T  1889218 tcttattctctctcttcctttttctctcaccattgtttttgaccaatgaaaagagagaaaaa 1889279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 6851663 - 6851598
Alignment:
Q  119 atgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| ||| |||| ||||||  |||||||| || ||||||||||| |||| ||||||||||||||    
T  6851663 atgttgttattctctctcttcatttttctctctcaattgtttttgaccaatcaaaagagagaaaaa 6851598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 10749686 - 10749617
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    |||||||| ||| |||| ||||||| |||||||| || ||||||||||| ||||  |||||||| |||||    
T  10749686 attatgtttttattctctctcttcctttttctctttccattgtttttgaccaatagaaagagaggaaaag 10749617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 14714057 - 14714114
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    ||||| |||| ||||||  |||||||| || |||||||||||||||| ||||||||||    
T  14714057 tcttattctctctcttcatttttctctctcaattgtttttgatcaatgaaaagagaga 14714114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 25094416 - 25094481
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    |||||||| ||| |||| |||| || |||| ||| |||||||||||||| |||||| |||||||||    
T  25094416 attatgtttttattctctctctacctttttatctctctattgtttttgaccaattagaagagagaa 25094481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 26321697 - 26321636
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||| | |||| ||||||||||||||    
T  26321697 tcttattctctctcttcctttttctctctcaattgtttttaaccaatgaaaagagagaaaaa 26321636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 30413721 - 30413672
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  30413721 ctcttcctttttctctctccattgtttttgaccaatcaaaagagagaaaa 30413672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 38021423 - 38021484
Alignment:
Q  119 atgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    ||||| ||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||    
T  38021423 atgttattattctctctcttcctttttctctctccattgtttttgaccaatcaaaagagaga 38021484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 42283239 - 42283190
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||||| || ||||| ||||||||||||||||||| |||||||| ||||    
T  42283239 ctcttcctttatctctttctattgtttttgatcaatgaaaagagaaaaaa 42283190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 43621954 - 43621885
Alignment:
Q  117 ttatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    |||| |||||||| ||  |||||  |||||||| || |||||||||||||||| | ||||||||||||||    
T  43621954 ttatcttcttactttctttcttcatttttctctctccattgtttttgatcaataagaagagagaaaaaga 43621885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 3585690 - 3585758
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| || ||| |||| |||| || |||||||| ||||||| ||||||||||| |||| |||||||||    
T  3585690 attatatttttattctctctctacctttttctctttctattgattttgatcaatcaaaatagagaaaaa 3585758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 4263871 - 4263803
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||||| || ||||||| |||||||| || ||||||||||| |||| | || |||||||||    
T  4263871 attatattcttactttctctcttcctttttctctctccattgtttttgaccaatgagaaaagagaaaaa 4263803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 5455460 - 5455392
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||| ||||||| |||||| | || ||||||||| | |||| ||||||||||||||    
T  5455460 attatcttcttattctctctcttcctttttctttctccattgtttttaaccaatgaaaagagagaaaaa 5455392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 11126528 - 11126596
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||| ||||||| ||||| || || |||||||||||||||| | |||| |||||||    
T  11126528 attatcttcttattctctctcttcctttttccctctccattgtttttgatcaataagaagaaagaaaaa 11126596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 11229328 - 11229260
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| ||| || | ||||||| |||||||| || ||||||||||| |||| ||||| ||||||||    
T  11229328 attatgtttttattccctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaa 11229260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 15820045 - 15820001
Alignment:
Q  120 tgttcttactctcgctcttccattttctctgtctattgtttttga 164  Q
    ||||||||||||| ||||| | |||||||| ||||||||||||||    
T  15820045 tgttcttactctctctctttctttttctctttctattgtttttga 15820001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 19668175 - 19668127
Alignment:
Q  135 tcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  19668175 tcttcctttttctctatccattgtttttgaccaatgaaaagagagaaaa 19668127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 25801806 - 25801750
Alignment:
Q  128 ctctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| ||||||  |||||||| || ||||||||||| |||| ||||||||||||||    
T  25801806 ctctctctcttcatttttctctctccattgtttttgaccaatgaaaagagagaaaaa 25801750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 42251927 - 42251859
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| || ||| |||| ||||||| |||||||| || |||| |||||| |||| ||||||||||||||    
T  42251927 attatatttttattctctctcttcctttttctctttccattgattttgaccaatgaaaagagagaaaaa 42251859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 43650542 - 43650486
Alignment:
Q  128 ctctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| ||||||| |||||||| || |||| |||||| |||| ||||||||||||||    
T  43650542 ctctctctcttcctttttctctttccattgattttgaccaataaaaagagagaaaaa 43650486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 44059693 - 44059661
Alignment:
Q  153 tattgtttttgatcaattaaaagagagaaaaag 185  Q
    |||||||||||| ||||||||||||||||||||    
T  44059693 tattgtttttgaccaattaaaagagagaaaaag 44059661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 9001021 - 9000953
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| ||||||||| ||||    
T  9001021 attatattcttactctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagtaaaa 9000953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 6005008 - 6005075
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| ||||||||||| ||||||| |||| ||| || ||||||||||| |||| |||||||||||||    
T  6005008 attatattcttactctctctcttcctttttttctctccattgtttttgaccaatgaaaagagagaaaa 6005075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 20995065 - 20994998
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||||| |||| | |||||||||||    
T  20995065 attatcttcttattctctctcttcctttttctctctctattgtttttgaccaataagaagagagaaaa 20994998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 42026436 - 42026503
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||| |||| ||||||| |||||||| | |||||||||||| |||| |||||||||||||    
T  42026436 attatattcttattctctctcttcctttttctctttttattgtttttgaccaataaaaagagagaaaa 42026503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 6849268 - 6849198
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||||| ||||||| |||||||| ||  |||||||||| |||| |||| |||||||||||    
T  6849268 attatattcttactctctctcttcctttttctctatccgttgtttttgaccaataaaaaaagagaaaaaga 6849198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 18550043 - 18550105
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    ||||| |||||| |||| ||||||| |||||||| ||||||||||||||||||| | ||||||    
T  18550043 attatcttcttattctctctcttcctttttctctctctattgtttttgatcaataagaagaga 18550105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 426172 - 426233
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  426172 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 426233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 34247850 - 34247903
Alignment:
Q  128 ctctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    ||||| ||||||| |||||||| |||||||||||||| |||| |||||||||||    
T  34247850 ctctctctcttcctttttctctttctattgtttttgaccaatgaaaagagagaa 34247903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 295610 - 295678
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| | || ||||||| |||||||| |||||||||||||| |||| |||| |||||||||    
T  295610 attattttcttattatctctcttcctttttctctctctattgtttttgaccaatgaaaatagagaaaaa 295678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 12960002 - 12960070
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||||| |||| |||| || |||||||| ||||||| ||||||||||| |||| |||||||||    
T  12960002 attatattcttattctctctctacctttttctctttctattgattttgatcaatcaaaatagagaaaaa 12960070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 24946066 - 24946134
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| ||| |||| ||||||| |||||||| || ||||||||||| |||| ||||| ||||||||    
T  24946066 attatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaa 24946134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 30578319 - 30578387
Alignment:
Q  117 ttatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    |||| ||||||||||| ||||||  |||||||| || ||||||||||| |||| | |||||||||||||    
T  30578319 ttatattcttactctctctcttcttttttctctctccattgtttttgaccaatgataagagagaaaaag 30578387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 36524759 - 36524691
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| ||||||||||  ||||||| |||||||| || |||| ||||||||||| | ||||||||||||    
T  36524759 attatattcttactctttctcttcctttttctctctcaattgcttttgatcaatgagaagagagaaaaa 36524691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 9985685 - 9985618
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||||| |||| | || ||||||||    
T  9985685 attatcttcttattctctctcttcctttttctctctctattgtttttgaccaataagaaaagagaaaa 9985618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 22203222 - 22203159
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||    
T  22203222 attatcttcttattctctctcttcctttttctctttccattgtttttgaccaatcaaaagagag 22203159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 22836146 - 22836083
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||    
T  22836146 attatcttcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagag 22836083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 44380621 - 44380554
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||| |||||| ||||| | |||||||| |||||||||||||| |||| |||| ||||||||    
T  44380621 attatattctgactctctctcttactttttctctctctattgtttttgaccaatcaaaaaagagaaaa 44380554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 12045660 - 12045598
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    ||||| ||||||||||| ||||||| |||||||| || ||||||||||| |||| | ||||||    
T  12045660 attatattcttactctctctcttcctttttctctctccattgtttttgaccaatgagaagaga 12045598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 13884398 - 13884448
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| || |||||||||||||||| | ||||||||||||    
T  13884398 ctcttcctttttctctctccattgtttttgatcaataagaagagagaaaaa 13884448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 22767212 - 22767262
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  22767212 ctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaaa 22767262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 23258114 - 23258164
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||||| |||||||| || ||||||||||| |||| ||||||||||||||    
T  23258114 ctcttcctttttctctttccattgtttttgaccaatgaaaagagagaaaaa 23258164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 25430710 - 25430772
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||||| |||| | ||||||    
T  25430710 attatcttcttattctctctcttcctttttctctctctattgtttttgaccaataagaagaga 25430772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 27300410 - 27300472
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||||| |||| | ||||||    
T  27300410 attatcttcttattctctctcttcctttttctctctctattgtttttgaccaataagaagaga 27300472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 31665997 - 31665927
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||| ||||| ||||||| |||||||| ||  || ||||||| |||| ||||||||||||||||    
T  31665997 attatattcttgctctctctcttcctttttctctctcctttatttttgaccaatgaaaagagagaaaaaga 31665927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 34838277 - 34838215
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagaga 178  Q
    ||||| |||||| |||| ||||||| |||||||| |||||||||||||| |||| | ||||||    
T  34838277 attatcttcttattctctctcttcctttttctctctctattgtttttgaccaataagaagaga 34838215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 40719638 - 40719584
Alignment:
Q  129 tctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||| ||||||| |||||||| |||||| ||||||| |||| |||||||||||||    
T  40719638 tctctctcttcctttttctctctctattatttttgaccaatcaaaagagagaaaa 40719584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 41293710 - 41293660
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||||||||||| || ||||||||||| |||| | ||||||||||||    
T  41293710 ctcttccattttctctctccattgtttttgaccaataagaagagagaaaaa 41293660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 1796565 - 1796614
Alignment:
Q  134 ctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||||| |||||||| || ||||||||||| |||| |||||||||||||    
T  1796565 ctcttcctttttctctctccattgtttttgaccaatgaaaagagagaaaa 1796614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 28473545 - 28473484
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||| | |||| ||||||||||||||    
T  28473545 tcttattctctctcttcctttttctctctccattgttttttaccaatgaaaagagagaaaaa 28473484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 28927752 - 28927809
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||    
T  28927752 tcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 28927809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 32725763 - 32725722
Alignment:
Q  142 ttttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||||||| |||||||||||||| |||| |||||||||||||    
T  32725763 ttttctctctctattgtttttgaccaatgaaaagagagaaaa 32725722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 36740402 - 36740443
Alignment:
Q  142 ttttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    |||||||| || |||||||||||||||| |||||||||||||    
T  36740402 ttttctctctccattgtttttgatcaatgaaaagagagaaaa 36740443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 895999 - 896039
Alignment:
Q  144 ttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||| |||||||||||||| |||| ||||||||||||||    
T  895999 ttctctctctattgtttttgaccaatgaaaagagagaaaaa 896039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 185
Target Start/End: Complemental strand, 3206433 - 3206401
Alignment:
Q  153 tattgtttttgatcaattaaaagagagaaaaag 185  Q
    |||||||||||| ||||||||||||||||||||    
T  3206433 tattgtttttgaccaattaaaagagagaaaaag 3206401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 5782887 - 5782919
Alignment:
Q  151 tctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||||||||||||||||| |||||||||||||    
T  5782887 tctattgtttttgatcaatgaaaagagagaaaa 5782919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 44068748 - 44068804
Alignment:
Q  129 tctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    |||| ||||||  |||||||| |||||||||||||| ||||  ||||||||||||||    
T  44068748 tctctctcttcttttttctctttctattgtttttgaccaatagaaagagagaaaaag 44068804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 16601 - 16531
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||||| |||||||  ||||||| || ||||||||||| |||| ||| ||||||||||||    
T  16601 attatattcttactctctctcttcctatttctctctccattgtttttgaccaatgaaacgagagaaaaaga 16531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 56243 - 56313
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaaga 186  Q
    ||||| ||||||||||| |||||||  ||||||| || ||||||||||| |||| ||| ||||||||||||    
T  56243 attatattcttactctctctcttcctatttctctctccattgtttttgaccaatgaaacgagagaaaaaga 56313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 6498 - 6559
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||  |||||||| || |||||||||||||||| ||||||||||||||    
T  6498 tcttattctctctcttcatttttctctctcaattgtttttgatcaatgaaaagagagaaaaa 6559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 440788 - 440849
Alignment:
Q  122 ttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||||||||| ||||||  |||||||| || ||||||||| | |||| |||||||||||||    
T  440788 ttcttactctctctcttcttttttctctctccattgttttttaccaatgaaaagagagaaaa 440849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 11543 - 11475
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    |||||||| ||| |||| ||||||| |||||||| || ||||||||||| |||| ||||| ||||||||    
T  11543 attatgtttttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagtgagaaaaa 11475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 17102 - 17165
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagag 179  Q
    ||||| |||||| |||| ||||||| |||||||| || ||||||||||| |||| |||||||||    
T  17102 attatcttcttattctctctcttcctttttctctctccattgtttttgaccaatgaaaagagag 17165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 4379 - 4445
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaa 183  Q
    ||||| |||||| |||| ||||||| |||||||| ||||||| |||||| |||| |||||||||||||    
T  4379 attatattcttattctctctcttcctttttctctctctattg-ttttgaccaatgaaaagagagaaaa 4445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 9848 - 9787
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||  |||||||| |||||||||||||| |||| |||||||| |||||    
T  9848 tcttattctccctcttcttttttctctctctattgtttttgaccaatgaaaagagaaaaaaa 9787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 974 - 1039
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaa 181  Q
    |||||||| ||| | || ||||||| |||||||| ||| |||||||||| |||| |||||||||||    
T  974 attatgtttttattttctctcttcctttttctctctctgttgtttttgaccaatgaaaagagagaa 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 1496 - 1435
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| | ||||||||||||    
T  1496 tcttattctctctcttcctttttctctctccattgtttttgaccaataagaagagagaaaaa 1435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 10516 - 10459
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagaga 180  Q
    ||||| |||| ||||||| |||||||| || ||||||||||| |||| ||||||||||    
T  10516 tcttattctccctcttcctttttctctctccattgtttttgaccaatgaaaagagaga 10459  T

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Target: scaffold0054 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 31600 - 31539
Alignment:
Q  123 tcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaa 184  Q
    ||||| |||| ||||||| |||||||| || ||||||||| | |||| ||||||||||||||    
T  31600 tcttattctctctcttcctttttctctctccattgtttttaaccaatgaaaagagagaaaaa 31539  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 185
Target Start/End: Complemental strand, 204454 - 204385
Alignment:
Q  116 attatgttcttactctcgctcttccattttctctgtctattgtttttgatcaattaaaagagagaaaaag 185  Q
    ||||| ||| || |||| ||||||| |||||||  |||||||||||||| |||| | |||||||||||||    
T  204454 attatcttcctattctctctcttcctttttctccctctattgtttttgaccaataagaagagagaaaaag 204385  T

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