View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7777_low_35 (Length: 269)
Name: NF7777_low_35
Description: NF7777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7777_low_35 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 16 - 261
Target Start/End: Original strand, 40080183 - 40080424
Alignment:
| Q |
16 |
aatatctacccaatccatgcaatcagagatgctaaaattcctcctataatttctggaattacatcgatgattgatatcctaaaataactagccaatattt |
115 |
Q |
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| T |
40080183 |
aatatctacccaatccatgcaatcagagatgctaaaattcctcctataatttctggaattacatcgatgattgatatcctaaaataactagccaatattt |
40080282 |
T |
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| Q |
116 |
acagttaacgagagaatcatgtacagttaagaaattaaatatcaatcccaaaaattgagcactgattacgcttattaatatcttatataaccatatgcat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
40080283 |
acagttaacgagagaatcatgtacagttaagaaattaaatatcaatcccaaaaattgagcactgattacgcttattaatatcttatataaccat----at |
40080378 |
T |
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| Q |
216 |
gctgttcatatactgaatatactgatactgctcataccttcatctc |
261 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
40080379 |
gctgttcatatactgaatatactgatactgctcataccttcctctc |
40080424 |
T |
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