View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7777_low_54 (Length: 214)

Name: NF7777_low_54
Description: NF7777
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7777_low_54
NF7777_low_54
[»] chr2 (29 HSPs)
chr2 (129-191)||(4838175-4838237)
chr2 (1-33)||(3446724-3446756)
chr2 (1-33)||(17078451-17078483)
chr2 (1-33)||(44822417-44822449)
chr2 (1-32)||(11050801-11050832)
chr2 (1-35)||(1260177-1260211)
chr2 (1-35)||(5474898-5474932)
chr2 (1-31)||(8250345-8250375)
chr2 (1-31)||(18694781-18694811)
chr2 (1-31)||(19281604-19281634)
chr2 (1-31)||(22653688-22653718)
chr2 (1-31)||(25857339-25857369)
chr2 (1-31)||(33228977-33229007)
chr2 (1-31)||(44948592-44948622)
chr2 (2-31)||(2289606-2289635)
chr2 (1-30)||(4183173-4183202)
chr2 (1-34)||(4562796-4562829)
chr2 (1-30)||(19684070-19684099)
chr2 (1-30)||(27297172-27297201)
chr2 (1-30)||(38400307-38400336)
chr2 (1-34)||(39408734-39408767)
chr2 (1-30)||(43895910-43895939)
chr2 (1-33)||(2806545-2806577)
chr2 (1-29)||(10463242-10463270)
chr2 (1-33)||(17034729-17034761)
chr2 (1-29)||(19958097-19958125)
chr2 (1-29)||(20919608-20919636)
chr2 (1-29)||(23405194-23405222)
chr2 (1-37)||(33041907-33041943)
[»] chr7 (25 HSPs)
chr7 (1-36)||(36469749-36469784)
chr7 (2-35)||(24061374-24061407)
chr7 (1-34)||(32074439-32074472)
chr7 (1-33)||(29617399-29617431)
chr7 (1-33)||(35815832-35815864)
chr7 (1-32)||(2681091-2681122)
chr7 (1-32)||(10244933-10244964)
chr7 (1-32)||(47641040-47641071)
chr7 (1-31)||(5990189-5990219)
chr7 (1-31)||(9877311-9877341)
chr7 (1-31)||(15238885-15238915)
chr7 (1-31)||(19753012-19753042)
chr7 (1-31)||(35950124-35950154)
chr7 (1-31)||(36389710-36389740)
chr7 (1-31)||(44616598-44616628)
chr7 (1-30)||(2228972-2229001)
chr7 (1-30)||(12640633-12640662)
chr7 (1-30)||(23102602-23102631)
chr7 (1-30)||(25833552-25833581)
chr7 (3-32)||(30940766-30940795)
chr7 (1-30)||(37300143-37300172)
chr7 (1-30)||(42443686-42443715)
chr7 (1-30)||(47999777-47999806)
chr7 (1-29)||(5833037-5833065)
chr7 (1-29)||(26816702-26816730)
[»] chr5 (31 HSPs)
chr5 (1-35)||(41477402-41477436)
chr5 (1-34)||(13621990-13622023)
chr5 (1-34)||(13956895-13956928)
chr5 (1-33)||(11897242-11897274)
chr5 (1-32)||(16603393-16603424)
chr5 (1-32)||(25729484-25729515)
chr5 (1-32)||(42320312-42320343)
chr5 (1-32)||(42916384-42916415)
chr5 (1-31)||(1743123-1743153)
chr5 (1-31)||(2848209-2848239)
chr5 (1-31)||(4417729-4417759)
chr5 (3-33)||(9125657-9125687)
chr5 (1-31)||(12891553-12891583)
chr5 (1-31)||(17545216-17545246)
chr5 (1-31)||(25648129-25648159)
chr5 (1-31)||(27765253-27765283)
chr5 (1-35)||(27852713-27852747)
chr5 (1-35)||(35512000-35512034)
chr5 (1-35)||(39886256-39886290)
chr5 (1-30)||(6518820-6518849)
chr5 (1-30)||(9835030-9835059)
chr5 (1-30)||(12463753-12463782)
chr5 (1-30)||(21749421-21749450)
chr5 (1-30)||(21918049-21918078)
chr5 (1-30)||(29713420-29713449)
chr5 (1-30)||(32505685-32505714)
chr5 (1-30)||(32706319-32706348)
chr5 (1-30)||(41179847-41179876)
chr5 (1-29)||(3198325-3198353)
chr5 (1-29)||(4067980-4068008)
chr5 (3-31)||(16971618-16971646)
[»] scaffold0707 (1 HSPs)
scaffold0707 (1-34)||(64-97)
[»] chr8 (37 HSPs)
chr8 (1-34)||(29514619-29514652)
chr8 (1-33)||(30972861-30972893)
chr8 (1-33)||(33604216-33604248)
chr8 (1-33)||(39362259-39362291)
chr8 (1-33)||(41689876-41689908)
chr8 (1-32)||(12269-12300)
chr8 (1-32)||(2168491-2168522)
chr8 (1-31)||(94555-94585)
chr8 (1-31)||(257535-257565)
chr8 (1-31)||(658355-658385)
chr8 (1-31)||(844091-844121)
chr8 (1-31)||(1937306-1937336)
chr8 (1-31)||(8265264-8265294)
chr8 (1-31)||(17027924-17027954)
chr8 (1-31)||(17558360-17558390)
chr8 (1-31)||(17698518-17698548)
chr8 (1-31)||(38745323-38745353)
chr8 (1-31)||(43656032-43656062)
chr8 (1-30)||(6280477-6280506)
chr8 (1-30)||(9187267-9187296)
chr8 (1-30)||(10736918-10736947)
chr8 (1-30)||(11875883-11875912)
chr8 (1-30)||(11890890-11890919)
chr8 (1-30)||(14876646-14876675)
chr8 (1-30)||(16449122-16449151)
chr8 (1-30)||(26022244-26022273)
chr8 (1-30)||(28909462-28909491)
chr8 (1-30)||(29716857-29716886)
chr8 (1-30)||(32719651-32719680)
chr8 (1-30)||(34413059-34413088)
chr8 (1-30)||(35939484-35939513)
chr8 (1-30)||(44340389-44340418)
chr8 (1-29)||(481009-481037)
chr8 (3-31)||(2079718-2079746)
chr8 (1-29)||(13059221-13059249)
chr8 (3-31)||(21548551-21548579)
chr8 (1-29)||(23178935-23178963)
[»] chr6 (22 HSPs)
chr6 (1-34)||(1968989-1969022)
chr6 (1-34)||(33573810-33573843)
chr6 (1-33)||(7865399-7865431)
chr6 (1-33)||(9246426-9246458)
chr6 (1-32)||(7177290-7177321)
chr6 (1-31)||(7545325-7545355)
chr6 (1-31)||(9435622-9435652)
chr6 (1-31)||(10934595-10934625)
chr6 (1-31)||(15091444-15091474)
chr6 (1-31)||(22574866-22574896)
chr6 (1-31)||(30885614-30885644)
chr6 (1-30)||(607184-607213)
chr6 (1-30)||(3794217-3794246)
chr6 (1-30)||(4408355-4408384)
chr6 (1-34)||(6210047-6210080)
chr6 (1-30)||(7207841-7207870)
chr6 (1-30)||(8857087-8857116)
chr6 (1-30)||(9372245-9372274)
chr6 (4-37)||(10517189-10517222)
chr6 (1-30)||(17441883-17441912)
chr6 (1-30)||(19953872-19953901)
chr6 (1-37)||(30704950-30704986)
[»] chr4 (42 HSPs)
chr4 (1-34)||(26919512-26919545)
chr4 (1-33)||(39023169-39023201)
chr4 (1-33)||(46775074-46775106)
chr4 (1-32)||(26868344-26868375)
chr4 (1-32)||(48569220-48569251)
chr4 (3-33)||(7686308-7686338)
chr4 (1-31)||(18360489-18360519)
chr4 (1-35)||(24680130-24680164)
chr4 (2-32)||(29329868-29329898)
chr4 (1-31)||(35219544-35219574)
chr4 (1-31)||(36602410-36602440)
chr4 (1-31)||(43596891-43596921)
chr4 (1-31)||(45126128-45126158)
chr4 (1-31)||(45849043-45849073)
chr4 (1-31)||(48949649-48949679)
chr4 (1-31)||(49901478-49901508)
chr4 (2-32)||(52483221-52483251)
chr4 (1-30)||(3764052-3764081)
chr4 (1-30)||(3847678-3847707)
chr4 (1-30)||(6371111-6371140)
chr4 (1-30)||(8433667-8433696)
chr4 (1-30)||(8965091-8965120)
chr4 (1-30)||(23705197-23705226)
chr4 (1-30)||(35465432-35465461)
chr4 (1-30)||(37935858-37935887)
chr4 (1-30)||(40051619-40051648)
chr4 (1-30)||(43147428-43147457)
chr4 (1-30)||(43207666-43207695)
chr4 (1-30)||(44602482-44602511)
chr4 (1-30)||(46105532-46105561)
chr4 (1-30)||(47934116-47934145)
chr4 (1-34)||(48744201-48744234)
chr4 (1-30)||(48798276-48798305)
chr4 (1-30)||(55251395-55251424)
chr4 (1-29)||(3161019-3161047)
chr4 (1-33)||(4590240-4590272)
chr4 (1-33)||(22788718-22788750)
chr4 (1-33)||(24997478-24997510)
chr4 (1-29)||(33933783-33933811)
chr4 (1-33)||(42218744-42218776)
chr4 (1-29)||(55055914-55055942)
chr4 (3-31)||(55853154-55853182)
[»] chr3 (37 HSPs)
chr3 (1-34)||(30555271-30555304)
chr3 (1-34)||(40933875-40933908)
chr3 (1-32)||(2522921-2522952)
chr3 (1-32)||(37800655-37800686)
chr3 (1-32)||(45701339-45701370)
chr3 (1-32)||(50496858-50496889)
chr3 (1-32)||(53347334-53347365)
chr3 (1-31)||(882385-882415)
chr3 (1-31)||(19550502-19550532)
chr3 (1-31)||(32256598-32256628)
chr3 (1-31)||(40192152-40192182)
chr3 (1-31)||(44652026-44652056)
chr3 (1-31)||(48739788-48739818)
chr3 (1-35)||(51425832-51425866)
chr3 (1-30)||(3748646-3748675)
chr3 (1-30)||(7269952-7269981)
chr3 (1-30)||(7920317-7920346)
chr3 (1-34)||(8964820-8964853)
chr3 (1-30)||(11820001-11820030)
chr3 (1-30)||(19999864-19999893)
chr3 (1-30)||(22501975-22502004)
chr3 (1-30)||(28550363-28550392)
chr3 (1-30)||(31327545-31327574)
chr3 (1-30)||(31327762-31327791)
chr3 (1-30)||(31529002-31529031)
chr3 (1-30)||(33225392-33225421)
chr3 (1-30)||(37488504-37488533)
chr3 (1-30)||(39300381-39300410)
chr3 (1-30)||(39966118-39966147)
chr3 (1-30)||(40548300-40548329)
chr3 (1-30)||(45551853-45551882)
chr3 (1-30)||(46795973-46796002)
chr3 (1-30)||(52410285-52410314)
chr3 (1-30)||(52945892-52945921)
chr3 (1-30)||(53163591-53163620)
chr3 (1-33)||(15975146-15975178)
chr3 (1-33)||(31316628-31316660)
[»] chr1 (36 HSPs)
chr1 (1-34)||(22563379-22563412)
chr1 (1-33)||(26584790-26584822)
chr1 (1-33)||(40519588-40519620)
chr1 (1-32)||(1151754-1151785)
chr1 (1-32)||(6893281-6893312)
chr1 (1-32)||(48638527-48638558)
chr1 (1-31)||(1570236-1570266)
chr1 (1-31)||(6438108-6438138)
chr1 (1-31)||(18216902-18216932)
chr1 (1-31)||(25999846-25999876)
chr1 (1-31)||(35605667-35605697)
chr1 (1-31)||(46965736-46965766)
chr1 (1-30)||(1836500-1836529)
chr1 (1-30)||(3269616-3269645)
chr1 (1-30)||(4482642-4482671)
chr1 (1-34)||(6130077-6130110)
chr1 (1-30)||(6702573-6702602)
chr1 (1-30)||(7166271-7166300)
chr1 (1-30)||(8865851-8865880)
chr1 (1-30)||(10664838-10664867)
chr1 (1-30)||(15819645-15819674)
chr1 (1-30)||(17671454-17671483)
chr1 (1-30)||(21265653-21265682)
chr1 (1-30)||(23933112-23933141)
chr1 (1-30)||(32594248-32594277)
chr1 (1-30)||(33207202-33207231)
chr1 (1-30)||(33254725-33254754)
chr1 (1-30)||(33274897-33274926)
chr1 (4-33)||(41677631-41677660)
chr1 (1-30)||(42054330-42054359)
chr1 (1-30)||(42490454-42490483)
chr1 (1-30)||(50899554-50899583)
chr1 (1-30)||(51050187-51050216)
chr1 (3-31)||(14760795-14760823)
chr1 (1-29)||(33200036-33200064)
chr1 (3-35)||(40211566-40211598)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-32)||(266741-266772)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-32)||(8869-8900)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-31)||(46522-46552)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-31)||(59779-59809)
[»] scaffold0608 (1 HSPs)
scaffold0608 (1-30)||(8963-8992)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-30)||(4058-4087)
[»] scaffold0275 (1 HSPs)
scaffold0275 (1-30)||(8818-8847)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-30)||(17617-17646)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-30)||(45881-45910)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-30)||(10870-10899)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-29)||(9309-9337)


Alignment Details
Target: chr2 (Bit Score: 63; Significance: 1e-27; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 4838237 - 4838175
Alignment:
Q  129 gaaagaaaataaattcctccattgaagtggtctatcttctttcaattttccttttctccttac 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4838237 gaaagaaaataaattcctccattgaagtggtctatcttctttcaattttccttttctccttac 4838175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3446756 - 3446724
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  3446756 ccctaccaactgagctaagctcacggggataaa 3446724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17078483 - 17078451
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  17078483 ccctaccaactgagctaagctcacggggataaa 17078451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44822449 - 44822417
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  44822449 ccctaccaactgagctaagctcacggggataaa 44822417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 11050801 - 11050832
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  11050801 ccctaccaactgagctaagctcacggggataa 11050832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 1260211 - 1260177
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaat 35  Q
    |||||||||||||||||||||||||||||| ||||    
T  1260211 ccctaccaactgagctaagctcacggggatgaaat 1260177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 5474932 - 5474898
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaat 35  Q
    |||| ||||||||||||||||||||||||||||||    
T  5474932 ccctgccaactgagctaagctcacggggataaaat 5474898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 8250345 - 8250375
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  8250345 ccctaccaactgagctaagctcacggggata 8250375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 18694811 - 18694781
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  18694811 ccctaccaactgagctaagctcacggggata 18694781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 19281634 - 19281604
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  19281634 ccctaccaactgagctaagctcacggggata 19281604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 22653688 - 22653718
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  22653688 ccctaccaactgagctaagctcacggggata 22653718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 25857339 - 25857369
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  25857339 ccctaccaactgagctaagctcacggggata 25857369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 33228977 - 33229007
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  33228977 ccctaccaactgagctaagctcacggggata 33229007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 44948622 - 44948592
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  44948622 ccctaccaactgagctaagctcacggggata 44948592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 2289635 - 2289606
Alignment:
Q  2 cctaccaactgagctaagctcacggggata 31  Q
    ||||||||||||||||||||||||||||||    
T  2289635 cctaccaactgagctaagctcacggggata 2289606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 4183202 - 4183173
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  4183202 ccctaccaactgagctaagctcacggggat 4183173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4562796 - 4562829
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    |||||||||||||||||| |||||||||||||||    
T  4562796 ccctaccaactgagctaaactcacggggataaaa 4562829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 19684099 - 19684070
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  19684099 ccctaccaactgagctaagctcacggggat 19684070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 27297201 - 27297172
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  27297201 ccctaccaactgagctaagctcacggggat 27297172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 38400336 - 38400307
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  38400336 ccctaccaactgagctaagctcacggggat 38400307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39408734 - 39408767
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    |||||||||||||| |||||||||||||||||||    
T  39408734 ccctaccaactgagttaagctcacggggataaaa 39408767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 43895939 - 43895910
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  43895939 ccctaccaactgagctaagctcacggggat 43895910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2806545 - 2806577
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    ||||||||||||||||||||||||||| |||||    
T  2806545 ccctaccaactgagctaagctcacgggaataaa 2806577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 10463242 - 10463270
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  10463242 ccctaccaactgagctaagctcacgggga 10463270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17034761 - 17034729
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    ||||||||| |||||||||||||||||||||||    
T  17034761 ccctaccaattgagctaagctcacggggataaa 17034729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 19958125 - 19958097
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  19958125 ccctaccaactgagctaagctcacgggga 19958097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 20919636 - 20919608
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  20919636 ccctaccaactgagctaagctcacgggga 20919608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 23405222 - 23405194
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  23405222 ccctaccaactgagctaagctcacgggga 23405194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 33041907 - 33041943
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaatga 37  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  33041907 ccctaccaactgagttaaactcacggggataaaatga 33041943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 36469749 - 36469784
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaatg 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  36469749 ccctaccaactgagctaagctcacggggataaaatg 36469784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 24061374 - 24061407
Alignment:
Q  2 cctaccaactgagctaagctcacggggataaaat 35  Q
    ||||||||||||||||||||||||||||||||||    
T  24061374 cctaccaactgagctaagctcacggggataaaat 24061407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 32074439 - 32074472
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  32074439 ccctaccaactgagctaagctcacggggataaaa 32074472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 29617431 - 29617399
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  29617431 ccctaccaactgagctaagctcacggggataaa 29617399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 35815864 - 35815832
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  35815864 ccctaccaactgagctaagctcacggggataaa 35815832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2681122 - 2681091
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  2681122 ccctaccaactgagctaagctcacggggataa 2681091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10244933 - 10244964
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  10244933 ccctaccaactgagctaagctcacggggataa 10244964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 47641071 - 47641040
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  47641071 ccctaccaactgagctaagctcacggggataa 47641040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 5990189 - 5990219
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  5990189 ccctaccaactgagctaagctcacggggata 5990219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 9877311 - 9877341
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  9877311 ccctaccaactgagctaagctcacggggata 9877341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 15238915 - 15238885
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  15238915 ccctaccaactgagctaagctcacggggata 15238885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 19753012 - 19753042
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  19753012 ccctaccaactgagctaagctcacggggata 19753042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 35950154 - 35950124
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  35950154 ccctaccaactgagctaagctcacggggata 35950124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 36389710 - 36389740
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  36389710 ccctaccaactgagctaagctcacggggata 36389740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 44616628 - 44616598
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  44616628 ccctaccaactgagctaagctcacggggata 44616598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 2229001 - 2228972
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  2229001 ccctaccaactgagctaagctcacggggat 2228972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 12640633 - 12640662
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  12640633 ccctaccaactgagctaagctcacggggat 12640662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23102602 - 23102631
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  23102602 ccctaccaactgagctaagctcacggggat 23102631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 25833581 - 25833552
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  25833581 ccctaccaactgagctaagctcacggggat 25833552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 30940795 - 30940766
Alignment:
Q  3 ctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||    
T  30940795 ctaccaactgagctaagctcacggggataa 30940766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 37300143 - 37300172
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  37300143 ccctaccaactgagctaagctcacggggat 37300172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 42443715 - 42443686
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  42443715 ccctaccaactgagctaagctcacggggat 42443686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 47999806 - 47999777
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  47999806 ccctaccaactgagctaagctcacggggat 47999777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 5833065 - 5833037
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  5833065 ccctaccaactgagctaagctcacgggga 5833037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 26816702 - 26816730
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  26816702 ccctaccaactgagctaagctcacgggga 26816730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000007; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 41477402 - 41477436
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaat 35  Q
    |||||||||||||||||||||||||||||||||||    
T  41477402 ccctaccaactgagctaagctcacggggataaaat 41477436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 13621990 - 13622023
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  13621990 ccctaccaactgagctaagctcacggggataaaa 13622023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 13956928 - 13956895
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  13956928 ccctaccaactgagctaagctcacggggataaaa 13956895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 11897274 - 11897242
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  11897274 ccctaccaactgagctaagctcacggggataaa 11897242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 16603424 - 16603393
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  16603424 ccctaccaactgagctaagctcacggggataa 16603393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 25729484 - 25729515
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  25729484 ccctaccaactgagctaagctcacggggataa 25729515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 42320343 - 42320312
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  42320343 ccctaccaactgagctaagctcacggggataa 42320312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 42916415 - 42916384
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  42916415 ccctaccaactgagctaagctcacggggataa 42916384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1743153 - 1743123
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  1743153 ccctaccaactgagctaagctcacggggata 1743123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 2848239 - 2848209
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  2848239 ccctaccaactgagctaagctcacggggata 2848209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 4417729 - 4417759
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  4417729 ccctaccaactgagctaagctcacggggata 4417759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 9125687 - 9125657
Alignment:
Q  3 ctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||    
T  9125687 ctaccaactgagctaagctcacggggataaa 9125657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 12891583 - 12891553
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  12891583 ccctaccaactgagctaagctcacggggata 12891553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 17545216 - 17545246
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  17545216 ccctaccaactgagctaagctcacggggata 17545246  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 25648129 - 25648159
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  25648129 ccctaccaactgagctaagctcacggggata 25648159  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 27765283 - 27765253
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  27765283 ccctaccaactgagctaagctcacggggata 27765253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 27852713 - 27852747
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaat 35  Q
    |||||||||||||||||| ||||||||||||||||    
T  27852713 ccctaccaactgagctaaactcacggggataaaat 27852747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 35512000 - 35512034
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaat 35  Q
    |||||||||||||| ||||||||||||||||||||    
T  35512000 ccctaccaactgagttaagctcacggggataaaat 35512034  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 39886256 - 39886290
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaat 35  Q
    ||||||||||||||||| |||||||||||||||||    
T  39886256 ccctaccaactgagctatgctcacggggataaaat 39886290  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 6518820 - 6518849
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  6518820 ccctaccaactgagctaagctcacggggat 6518849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 9835059 - 9835030
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  9835059 ccctaccaactgagctaagctcacggggat 9835030  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 12463782 - 12463753
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  12463782 ccctaccaactgagctaagctcacggggat 12463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 21749421 - 21749450
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  21749421 ccctaccaactgagctaagctcacggggat 21749450  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 21918078 - 21918049
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  21918078 ccctaccaactgagctaagctcacggggat 21918049  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 29713420 - 29713449
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  29713420 ccctaccaactgagctaagctcacggggat 29713449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 32505714 - 32505685
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  32505714 ccctaccaactgagctaagctcacggggat 32505685  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 32706348 - 32706319
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  32706348 ccctaccaactgagctaagctcacggggat 32706319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 41179847 - 41179876
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  41179847 ccctaccaactgagctaagctcacggggat 41179876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 3198353 - 3198325
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  3198353 ccctaccaactgagctaagctcacgggga 3198325  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 4068008 - 4067980
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  4068008 ccctaccaactgagctaagctcacgggga 4067980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 16971646 - 16971618
Alignment:
Q  3 ctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||    
T  16971646 ctaccaactgagctaagctcacggggata 16971618  T

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Target: scaffold0707 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 64 - 97
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  64 ccctaccaactgagctaagctcacggggataaaa 97  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 29514652 - 29514619
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  29514652 ccctaccaactgagctaagctcacggggataaaa 29514619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 30972861 - 30972893
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  30972861 ccctaccaactgagctaagctcacggggataaa 30972893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33604216 - 33604248
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  33604216 ccctaccaactgagctaagctcacggggataaa 33604248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39362291 - 39362259
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  39362291 ccctaccaactgagctaagctcacggggataaa 39362259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 41689908 - 41689876
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  41689908 ccctaccaactgagctaagctcacggggataaa 41689876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 12269 - 12300
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  12269 ccctaccaactgagctaagctcacggggataa 12300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2168491 - 2168522
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  2168491 ccctaccaactgagctaagctcacggggataa 2168522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 94555 - 94585
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  94555 ccctaccaactgagctaagctcacggggata 94585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 257565 - 257535
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  257565 ccctaccaactgagctaagctcacggggata 257535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 658355 - 658385
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  658355 ccctaccaactgagctaagctcacggggata 658385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 844091 - 844121
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  844091 ccctaccaactgagctaagctcacggggata 844121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 1937336 - 1937306
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  1937336 ccctaccaactgagctaagctcacggggata 1937306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 8265294 - 8265264
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  8265294 ccctaccaactgagctaagctcacggggata 8265264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 17027924 - 17027954
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  17027924 ccctaccaactgagctaagctcacggggata 17027954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 17558360 - 17558390
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  17558360 ccctaccaactgagctaagctcacggggata 17558390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 17698548 - 17698518
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  17698548 ccctaccaactgagctaagctcacggggata 17698518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 38745323 - 38745353
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  38745323 ccctaccaactgagctaagctcacggggata 38745353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 43656062 - 43656032
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  43656062 ccctaccaactgagctaagctcacggggata 43656032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 6280506 - 6280477
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  6280506 ccctaccaactgagctaagctcacggggat 6280477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 9187267 - 9187296
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  9187267 ccctaccaactgagctaagctcacggggat 9187296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 10736918 - 10736947
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  10736918 ccctaccaactgagctaagctcacggggat 10736947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 11875912 - 11875883
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  11875912 ccctaccaactgagctaagctcacggggat 11875883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 11890919 - 11890890
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  11890919 ccctaccaactgagctaagctcacggggat 11890890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 14876646 - 14876675
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  14876646 ccctaccaactgagctaagctcacggggat 14876675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 16449151 - 16449122
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  16449151 ccctaccaactgagctaagctcacggggat 16449122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 26022273 - 26022244
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  26022273 ccctaccaactgagctaagctcacggggat 26022244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 28909491 - 28909462
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  28909491 ccctaccaactgagctaagctcacggggat 28909462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 29716886 - 29716857
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  29716886 ccctaccaactgagctaagctcacggggat 29716857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 32719651 - 32719680
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  32719651 ccctaccaactgagctaagctcacggggat 32719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 34413088 - 34413059
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  34413088 ccctaccaactgagctaagctcacggggat 34413059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 35939513 - 35939484
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  35939513 ccctaccaactgagctaagctcacggggat 35939484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 44340389 - 44340418
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  44340389 ccctaccaactgagctaagctcacggggat 44340418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 481037 - 481009
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  481037 ccctaccaactgagctaagctcacgggga 481009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 2079718 - 2079746
Alignment:
Q  3 ctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||    
T  2079718 ctaccaactgagctaagctcacggggata 2079746  T

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Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 13059221 - 13059249
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  13059221 ccctaccaactgagctaagctcacgggga 13059249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 21548551 - 21548579
Alignment:
Q  3 ctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||    
T  21548551 ctaccaactgagctaagctcacggggata 21548579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 23178935 - 23178963
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  23178935 ccctaccaactgagctaagctcacgggga 23178963  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1969022 - 1968989
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  1969022 ccctaccaactgagctaagctcacggggataaaa 1968989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33573843 - 33573810
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  33573843 ccctaccaactgagctaagctcacggggataaaa 33573810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 7865399 - 7865431
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  7865399 ccctaccaactgagctaagctcacggggataaa 7865431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9246426 - 9246458
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  9246426 ccctaccaactgagctaagctcacggggataaa 9246458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 7177321 - 7177290
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  7177321 ccctaccaactgagctaagctcacggggataa 7177290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 7545355 - 7545325
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  7545355 ccctaccaactgagctaagctcacggggata 7545325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 9435652 - 9435622
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  9435652 ccctaccaactgagctaagctcacggggata 9435622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 10934625 - 10934595
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  10934625 ccctaccaactgagctaagctcacggggata 10934595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 15091474 - 15091444
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  15091474 ccctaccaactgagctaagctcacggggata 15091444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 22574896 - 22574866
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  22574896 ccctaccaactgagctaagctcacggggata 22574866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 30885614 - 30885644
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  30885614 ccctaccaactgagctaagctcacggggata 30885644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 607213 - 607184
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  607213 ccctaccaactgagctaagctcacggggat 607184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 3794217 - 3794246
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  3794217 ccctaccaactgagctaagctcacggggat 3794246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 4408384 - 4408355
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  4408384 ccctaccaactgagctaagctcacggggat 4408355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6210080 - 6210047
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  6210080 ccctaccaactgagctaagttcacggggataaaa 6210047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 7207870 - 7207841
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  7207870 ccctaccaactgagctaagctcacggggat 7207841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 8857116 - 8857087
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  8857116 ccctaccaactgagctaagctcacggggat 8857087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 9372245 - 9372274
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  9372245 ccctaccaactgagctaagctcacggggat 9372274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 10517222 - 10517189
Alignment:
Q  4 taccaactgagctaagctcacggggataaaatga 37  Q
    |||||||||||||||||||||||||||| |||||    
T  10517222 taccaactgagctaagctcacggggatataatga 10517189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 17441883 - 17441912
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  17441883 ccctaccaactgagctaagctcacggggat 17441912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 19953872 - 19953901
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  19953872 ccctaccaactgagctaagctcacggggat 19953901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30704986 - 30704950
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaatga 37  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  30704986 ccctaccaactgaactaagctcacggggattaaatga 30704950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26919512 - 26919545
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  26919512 ccctaccaactgagctaagctcacggggataaaa 26919545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 39023201 - 39023169
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  39023201 ccctaccaactgagctaagctcacggggataaa 39023169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 46775074 - 46775106
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  46775074 ccctaccaactgagctaagctcacggggataaa 46775106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26868375 - 26868344
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  26868375 ccctaccaactgagctaagctcacggggataa 26868344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 48569220 - 48569251
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  48569220 ccctaccaactgagctaagctcacggggataa 48569251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 7686308 - 7686338
Alignment:
Q  3 ctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||    
T  7686308 ctaccaactgagctaagctcacggggataaa 7686338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 18360519 - 18360489
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  18360519 ccctaccaactgagctaagctcacggggata 18360489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24680130 - 24680164
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaat 35  Q
    |||||||||||||||||||||||||||||| ||||    
T  24680130 ccctaccaactgagctaagctcacggggatcaaat 24680164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 29329868 - 29329898
Alignment:
Q  2 cctaccaactgagctaagctcacggggataa 32  Q
    |||||||||||||||||||||||||||||||    
T  29329868 cctaccaactgagctaagctcacggggataa 29329898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 35219544 - 35219574
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  35219544 ccctaccaactgagctaagctcacggggata 35219574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 36602410 - 36602440
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  36602410 ccctaccaactgagctaagctcacggggata 36602440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 43596921 - 43596891
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  43596921 ccctaccaactgagctaagctcacggggata 43596891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 45126158 - 45126128
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  45126158 ccctaccaactgagctaagctcacggggata 45126128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 45849073 - 45849043
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  45849073 ccctaccaactgagctaagctcacggggata 45849043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 48949679 - 48949649
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  48949679 ccctaccaactgagctaagctcacggggata 48949649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 49901508 - 49901478
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  49901508 ccctaccaactgagctaagctcacggggata 49901478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 52483221 - 52483251
Alignment:
Q  2 cctaccaactgagctaagctcacggggataa 32  Q
    |||||||||||||||||||||||||||||||    
T  52483221 cctaccaactgagctaagctcacggggataa 52483251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 3764052 - 3764081
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  3764052 ccctaccaactgagctaagctcacggggat 3764081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 3847707 - 3847678
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  3847707 ccctaccaactgagctaagctcacggggat 3847678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 6371140 - 6371111
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  6371140 ccctaccaactgagctaagctcacggggat 6371111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 8433667 - 8433696
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  8433667 ccctaccaactgagctaagctcacggggat 8433696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 8965120 - 8965091
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  8965120 ccctaccaactgagctaagctcacggggat 8965091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23705197 - 23705226
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  23705197 ccctaccaactgagctaagctcacggggat 23705226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 35465461 - 35465432
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  35465461 ccctaccaactgagctaagctcacggggat 35465432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 37935887 - 37935858
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  37935887 ccctaccaactgagctaagctcacggggat 37935858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 40051648 - 40051619
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  40051648 ccctaccaactgagctaagctcacggggat 40051619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 43147428 - 43147457
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  43147428 ccctaccaactgagctaagctcacggggat 43147457  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 43207695 - 43207666
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  43207695 ccctaccaactgagctaagctcacggggat 43207666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 44602511 - 44602482
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  44602511 ccctaccaactgagctaagctcacggggat 44602482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 46105561 - 46105532
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  46105561 ccctaccaactgagctaagctcacggggat 46105532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 47934116 - 47934145
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  47934116 ccctaccaactgagctaagctcacggggat 47934145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 48744234 - 48744201
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  48744234 ccctaccaactgagctaagctcatggggataaaa 48744201  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 48798305 - 48798276
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  48798305 ccctaccaactgagctaagctcacggggat 48798276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 55251395 - 55251424
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  55251395 ccctaccaactgagctaagctcacggggat 55251424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 3161047 - 3161019
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  3161047 ccctaccaactgagctaagctcacgggga 3161019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4590272 - 4590240
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||| ||||||||||||||    
T  4590272 ccctaccaactgagctaaactcacggggataaa 4590240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22788718 - 22788750
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    ||||||||||||||||||||||||||| |||||    
T  22788718 ccctaccaactgagctaagctcacgggaataaa 22788750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24997478 - 24997510
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    ||||||||||||||||||||||||||| |||||    
T  24997478 ccctaccaactgagctaagctcacgggaataaa 24997510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 33933783 - 33933811
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  33933783 ccctaccaactgagctaagctcacgggga 33933811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 42218776 - 42218744
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    ||||||||||||||||||| |||||||||||||    
T  42218776 ccctaccaactgagctaagttcacggggataaa 42218744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 55055942 - 55055914
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  55055942 ccctaccaactgagctaagctcacgggga 55055914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 55853154 - 55853182
Alignment:
Q  3 ctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||    
T  55853154 ctaccaactgagctaagctcacggggata 55853182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30555271 - 30555304
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  30555271 ccctaccaactgagctaagctcacggggataaaa 30555304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 40933875 - 40933908
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  40933875 ccctaccaactgagctaagctcacggggataaaa 40933908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2522952 - 2522921
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  2522952 ccctaccaactgagctaagctcacggggataa 2522921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37800655 - 37800686
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  37800655 ccctaccaactgagctaagctcacggggataa 37800686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 45701370 - 45701339
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  45701370 ccctaccaactgagctaagctcacggggataa 45701339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 50496858 - 50496889
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  50496858 ccctaccaactgagctaagctcacggggataa 50496889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 53347334 - 53347365
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  53347334 ccctaccaactgagctaagctcacggggataa 53347365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 882415 - 882385
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  882415 ccctaccaactgagctaagctcacggggata 882385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 19550532 - 19550502
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  19550532 ccctaccaactgagctaagctcacggggata 19550502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 32256598 - 32256628
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  32256598 ccctaccaactgagctaagctcacggggata 32256628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 40192182 - 40192152
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  40192182 ccctaccaactgagctaagctcacggggata 40192152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 44652026 - 44652056
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  44652026 ccctaccaactgagctaagctcacggggata 44652056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 48739788 - 48739818
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  48739788 ccctaccaactgagctaagctcacggggata 48739818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 51425866 - 51425832
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaat 35  Q
    |||||||||||||| ||||||||||||||||||||    
T  51425866 ccctaccaactgagttaagctcacggggataaaat 51425832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 3748646 - 3748675
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  3748646 ccctaccaactgagctaagctcacggggat 3748675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 7269981 - 7269952
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  7269981 ccctaccaactgagctaagctcacggggat 7269952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 7920346 - 7920317
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  7920346 ccctaccaactgagctaagctcacggggat 7920317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8964820 - 8964853
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    |||||||||||||||||| |||||||||||||||    
T  8964820 ccctaccaactgagctaaactcacggggataaaa 8964853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 11820030 - 11820001
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  11820030 ccctaccaactgagctaagctcacggggat 11820001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 19999893 - 19999864
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  19999893 ccctaccaactgagctaagctcacggggat 19999864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 22501975 - 22502004
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  22501975 ccctaccaactgagctaagctcacggggat 22502004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 28550363 - 28550392
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  28550363 ccctaccaactgagctaagctcacggggat 28550392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 31327545 - 31327574
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  31327545 ccctaccaactgagctaagctcacggggat 31327574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 31327762 - 31327791
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  31327762 ccctaccaactgagctaagctcacggggat 31327791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 31529002 - 31529031
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  31529002 ccctaccaactgagctaagctcacggggat 31529031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 33225392 - 33225421
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  33225392 ccctaccaactgagctaagctcacggggat 33225421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 37488504 - 37488533
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  37488504 ccctaccaactgagctaagctcacggggat 37488533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 39300410 - 39300381
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  39300410 ccctaccaactgagctaagctcacggggat 39300381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 39966118 - 39966147
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  39966118 ccctaccaactgagctaagctcacggggat 39966147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 40548329 - 40548300
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  40548329 ccctaccaactgagctaagctcacggggat 40548300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 45551853 - 45551882
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  45551853 ccctaccaactgagctaagctcacggggat 45551882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 46795973 - 46796002
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  46795973 ccctaccaactgagctaagctcacggggat 46796002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 52410285 - 52410314
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  52410285 ccctaccaactgagctaagctcacggggat 52410314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 52945921 - 52945892
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  52945921 ccctaccaactgagctaagctcacggggat 52945892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 53163620 - 53163591
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  53163620 ccctaccaactgagctaagctcacggggat 53163591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 15975178 - 15975146
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  15975178 ccctaccaactgagctaagctcacagggataaa 15975146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31316660 - 31316628
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    ||||| |||||||||||||||||||||||||||    
T  31316660 ccctatcaactgagctaagctcacggggataaa 31316628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22563412 - 22563379
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  22563412 ccctaccaactgagctaagctcacggggataaaa 22563379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 26584790 - 26584822
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  26584790 ccctaccaactgagctaagctcacggggataaa 26584822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40519588 - 40519620
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  40519588 ccctaccaactgagctaagctcacggggataaa 40519620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 1151785 - 1151754
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  1151785 ccctaccaactgagctaagctcacggggataa 1151754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 6893281 - 6893312
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  6893281 ccctaccaactgagctaagctcacggggataa 6893312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 48638558 - 48638527
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  48638558 ccctaccaactgagctaagctcacggggataa 48638527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 1570236 - 1570266
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  1570236 ccctaccaactgagctaagctcacggggata 1570266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 6438108 - 6438138
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  6438108 ccctaccaactgagctaagctcacggggata 6438138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 18216932 - 18216902
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  18216932 ccctaccaactgagctaagctcacggggata 18216902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 25999876 - 25999846
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  25999876 ccctaccaactgagctaagctcacggggata 25999846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 35605667 - 35605697
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  35605667 ccctaccaactgagctaagctcacggggata 35605697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 46965766 - 46965736
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  46965766 ccctaccaactgagctaagctcacggggata 46965736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 1836529 - 1836500
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  1836529 ccctaccaactgagctaagctcacggggat 1836500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 3269645 - 3269616
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  3269645 ccctaccaactgagctaagctcacggggat 3269616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 4482642 - 4482671
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  4482642 ccctaccaactgagctaagctcacggggat 4482671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6130077 - 6130110
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataaaa 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  6130077 ccctaccaactgagctacgctcacggggataaaa 6130110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 6702602 - 6702573
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  6702602 ccctaccaactgagctaagctcacggggat 6702573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 7166271 - 7166300
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  7166271 ccctaccaactgagctaagctcacggggat 7166300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 8865880 - 8865851
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  8865880 ccctaccaactgagctaagctcacggggat 8865851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 10664838 - 10664867
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  10664838 ccctaccaactgagctaagctcacggggat 10664867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 15819645 - 15819674
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  15819645 ccctaccaactgagctaagctcacggggat 15819674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 17671454 - 17671483
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  17671454 ccctaccaactgagctaagctcacggggat 17671483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 21265682 - 21265653
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  21265682 ccctaccaactgagctaagctcacggggat 21265653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 23933112 - 23933141
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  23933112 ccctaccaactgagctaagctcacggggat 23933141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 32594277 - 32594248
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  32594277 ccctaccaactgagctaagctcacggggat 32594248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 33207231 - 33207202
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  33207231 ccctaccaactgagctaagctcacggggat 33207202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 33254754 - 33254725
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  33254754 ccctaccaactgagctaagctcacggggat 33254725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 33274926 - 33274897
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  33274926 ccctaccaactgagctaagctcacggggat 33274897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 33
Target Start/End: Original strand, 41677631 - 41677660
Alignment:
Q  4 taccaactgagctaagctcacggggataaa 33  Q
    ||||||||||||||||||||||||||||||    
T  41677631 taccaactgagctaagctcacggggataaa 41677660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 42054359 - 42054330
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  42054359 ccctaccaactgagctaagctcacggggat 42054330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 42490454 - 42490483
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  42490454 ccctaccaactgagctaagctcacggggat 42490483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 50899554 - 50899583
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  50899554 ccctaccaactgagctaagctcacggggat 50899583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 51050216 - 51050187
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  51050216 ccctaccaactgagctaagctcacggggat 51050187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Original strand, 14760795 - 14760823
Alignment:
Q  3 ctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||    
T  14760795 ctaccaactgagctaagctcacggggata 14760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 33200064 - 33200036
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  33200064 ccctaccaactgagctaagctcacgggga 33200036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 40211566 - 40211598
Alignment:
Q  3 ctaccaactgagctaagctcacggggataaaat 35  Q
    |||||||||||| ||||||||||||||||||||    
T  40211566 ctaccaactgagttaagctcacggggataaaat 40211598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 266741 - 266772
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  266741 ccctaccaactgagctaagctcacggggataa 266772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8869 - 8900
Alignment:
Q  1 ccctaccaactgagctaagctcacggggataa 32  Q
    ||||||||||||||||||||||||||||||||    
T  8869 ccctaccaactgagctaagctcacggggataa 8900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 46552 - 46522
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  46552 ccctaccaactgagctaagctcacggggata 46522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 59809 - 59779
Alignment:
Q  1 ccctaccaactgagctaagctcacggggata 31  Q
    |||||||||||||||||||||||||||||||    
T  59809 ccctaccaactgagctaagctcacggggata 59779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 8992 - 8963
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  8992 ccctaccaactgagctaagctcacggggat 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 4058 - 4087
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  4058 ccctaccaactgagctaagctcacggggat 4087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 8847 - 8818
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  8847 ccctaccaactgagctaagctcacggggat 8818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 17646 - 17617
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  17646 ccctaccaactgagctaagctcacggggat 17617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 45910 - 45881
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  45910 ccctaccaactgagctaagctcacggggat 45881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 10870 - 10899
Alignment:
Q  1 ccctaccaactgagctaagctcacggggat 30  Q
    ||||||||||||||||||||||||||||||    
T  10870 ccctaccaactgagctaagctcacggggat 10899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 9337 - 9309
Alignment:
Q  1 ccctaccaactgagctaagctcacgggga 29  Q
    |||||||||||||||||||||||||||||    
T  9337 ccctaccaactgagctaagctcacgggga 9309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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