View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7778_low_6 (Length: 295)

Name: NF7778_low_6
Description: NF7778
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7778_low_6
NF7778_low_6
[»] chr2 (34 HSPs)
chr2 (167-270)||(13438341-13438444)
chr2 (161-270)||(10249381-10249490)
chr2 (169-269)||(32505648-32505748)
chr2 (164-270)||(9058475-9058581)
chr2 (172-270)||(28863458-28863556)
chr2 (169-270)||(33436099-33436200)
chr2 (169-270)||(7465734-7465835)
chr2 (169-270)||(17473020-17473121)
chr2 (168-270)||(40701477-40701579)
chr2 (169-270)||(5574487-5574588)
chr2 (169-270)||(30915463-30915564)
chr2 (166-270)||(28381654-28381758)
chr2 (167-270)||(19930819-19930922)
chr2 (167-270)||(27864702-27864805)
chr2 (168-269)||(4060684-4060785)
chr2 (167-270)||(40613901-40614004)
chr2 (169-270)||(20700815-20700916)
chr2 (169-270)||(36168836-36168937)
chr2 (169-270)||(38273141-38273242)
chr2 (169-252)||(38882831-38882913)
chr2 (169-263)||(2533124-2533217)
chr2 (169-270)||(38732354-38732455)
chr2 (169-270)||(42257193-42257294)
chr2 (169-270)||(26891503-26891604)
chr2 (167-259)||(43490119-43490211)
chr2 (168-270)||(17820003-17820105)
chr2 (160-270)||(45097734-45097844)
chr2 (169-238)||(17823784-17823853)
chr2 (170-270)||(41575138-41575239)
chr2 (175-270)||(3439985-3440080)
chr2 (169-270)||(33436211-33436312)
chr2 (213-269)||(3737987-3738043)
chr2 (187-270)||(2997486-2997569)
chr2 (169-234)||(15428775-15428840)
[»] chr4 (29 HSPs)
chr4 (1-168)||(50502452-50502622)
chr4 (169-270)||(480446-480547)
chr4 (169-270)||(42044366-42044467)
chr4 (168-270)||(11511461-11511563)
chr4 (169-270)||(48183048-48183149)
chr4 (169-270)||(50052427-50052528)
chr4 (168-263)||(54473539-54473634)
chr4 (168-270)||(6034043-6034145)
chr4 (169-270)||(41236347-41236448)
chr4 (167-270)||(3481652-3481755)
chr4 (169-270)||(29234244-29234345)
chr4 (169-270)||(29239886-29239987)
chr4 (168-270)||(31910191-31910293)
chr4 (169-270)||(23608235-23608336)
chr4 (169-270)||(24995106-24995207)
chr4 (174-270)||(53352565-53352660)
chr4 (168-262)||(50526178-50526272)
chr4 (177-272)||(28480265-28480360)
chr4 (177-272)||(28481140-28481235)
chr4 (177-272)||(28482015-28482110)
chr4 (205-288)||(41823918-41824000)
chr4 (164-270)||(29977880-29977986)
chr4 (169-270)||(19670715-19670816)
chr4 (169-270)||(48647725-48647826)
chr4 (169-270)||(47986208-47986309)
chr4 (167-270)||(40574777-40574880)
chr4 (160-270)||(50813891-50814000)
chr4 (187-270)||(17983742-17983825)
chr4 (169-255)||(8343177-8343263)
[»] chr8 (31 HSPs)
chr8 (169-270)||(12831047-12831148)
chr8 (167-270)||(15197331-15197434)
chr8 (162-263)||(504127-504228)
chr8 (169-270)||(14547922-14548023)
chr8 (166-270)||(23122596-23122700)
chr8 (166-270)||(34012295-34012399)
chr8 (168-270)||(40423942-40424044)
chr8 (169-270)||(10284630-10284731)
chr8 (169-270)||(44507086-44507187)
chr8 (169-269)||(37038479-37038579)
chr8 (169-270)||(1179939-1180040)
chr8 (170-270)||(5957831-5957931)
chr8 (168-270)||(15048181-15048282)
chr8 (159-270)||(43414580-43414691)
chr8 (188-270)||(8841431-8841513)
chr8 (169-258)||(17443825-17443914)
chr8 (174-270)||(10621086-10621182)
chr8 (169-270)||(4854862-4854963)
chr8 (169-270)||(42221515-42221616)
chr8 (170-270)||(9122196-9122286)
chr8 (169-270)||(16056400-16056501)
chr8 (169-270)||(16383377-16383478)
chr8 (169-270)||(24307792-24307893)
chr8 (169-252)||(14055609-14055692)
chr8 (169-270)||(15258928-15259029)
chr8 (169-270)||(34307216-34307317)
chr8 (166-237)||(20074966-20075037)
chr8 (169-232)||(24307629-24307692)
chr8 (165-238)||(30183906-30183979)
chr8 (169-234)||(30479509-30479574)
chr8 (169-210)||(32032725-32032766)
[»] chr5 (27 HSPs)
chr5 (165-270)||(40145403-40145508)
chr5 (172-270)||(18520883-18520981)
chr5 (169-270)||(13811652-13811753)
chr5 (169-270)||(2740274-2740375)
chr5 (169-270)||(36732941-36733042)
chr5 (166-270)||(33149637-33149741)
chr5 (167-269)||(14831812-14831914)
chr5 (167-263)||(42414308-42414404)
chr5 (169-263)||(15409616-15409710)
chr5 (168-270)||(35785198-35785300)
chr5 (169-270)||(35943891-35943992)
chr5 (169-269)||(31008988-31009088)
chr5 (167-270)||(28177773-28177876)
chr5 (169-260)||(41470425-41470516)
chr5 (168-270)||(26720515-26720617)
chr5 (168-270)||(26990264-26990366)
chr5 (169-270)||(6679698-6679799)
chr5 (168-270)||(6260000-6260102)
chr5 (169-270)||(3921264-3921365)
chr5 (169-269)||(20073516-20073616)
chr5 (170-270)||(36875611-36875702)
chr5 (169-270)||(2252167-2252268)
chr5 (218-261)||(31132393-31132436)
chr5 (169-270)||(9603813-9603914)
chr5 (170-263)||(16327902-16327995)
chr5 (225-270)||(21370060-21370105)
chr5 (169-270)||(38296203-38296304)
[»] chr3 (32 HSPs)
chr3 (165-270)||(53982007-53982112)
chr3 (168-270)||(33644199-33644301)
chr3 (169-270)||(17470405-17470506)
chr3 (169-270)||(49607414-49607515)
chr3 (174-270)||(52629305-52629401)
chr3 (169-270)||(8076393-8076494)
chr3 (169-270)||(27714890-27714991)
chr3 (169-270)||(54868894-54868995)
chr3 (166-270)||(26141531-26141635)
chr3 (170-270)||(31456690-31456790)
chr3 (169-270)||(51419359-51419460)
chr3 (169-270)||(11095354-11095453)
chr3 (169-270)||(11907371-11907472)
chr3 (169-270)||(33118850-33118951)
chr3 (173-283)||(48587078-48587187)
chr3 (169-270)||(11347921-11348022)
chr3 (169-254)||(36707439-36707524)
chr3 (168-270)||(30801732-30801834)
chr3 (174-270)||(26754700-26754796)
chr3 (169-280)||(9562999-9563109)
chr3 (168-270)||(20764914-20765016)
chr3 (169-270)||(41189763-41189864)
chr3 (169-270)||(14623838-14623939)
chr3 (169-270)||(48375705-48375806)
chr3 (169-263)||(8956762-8956856)
chr3 (169-270)||(24699953-24700054)
chr3 (169-270)||(47531865-47531966)
chr3 (170-270)||(13898054-13898154)
chr3 (169-237)||(35965806-35965874)
chr3 (169-263)||(35536626-35536720)
chr3 (184-249)||(45320385-45320450)
chr3 (110-168)||(29202855-29202910)
[»] chr7 (35 HSPs)
chr7 (168-270)||(38267039-38267141)
chr7 (169-270)||(36361912-36362013)
chr7 (169-270)||(7389389-7389490)
chr7 (169-270)||(36362026-36362127)
chr7 (170-270)||(32951492-32951592)
chr7 (172-270)||(3783998-3784096)
chr7 (169-270)||(8080382-8080483)
chr7 (169-270)||(38837217-38837318)
chr7 (167-270)||(19329840-19329943)
chr7 (167-270)||(35137531-35137634)
chr7 (169-283)||(3434562-3434675)
chr7 (169-270)||(19436186-19436287)
chr7 (167-270)||(3694365-3694468)
chr7 (167-270)||(21234399-21234502)
chr7 (169-270)||(4999513-4999614)
chr7 (169-270)||(40957707-40957808)
chr7 (169-263)||(46374808-46374902)
chr7 (169-270)||(36208173-36208274)
chr7 (167-270)||(8238210-8238314)
chr7 (169-270)||(11044188-11044279)
chr7 (174-288)||(35522881-35522994)
chr7 (169-270)||(26296644-26296745)
chr7 (169-270)||(38044197-38044298)
chr7 (169-270)||(46033800-46033901)
chr7 (169-270)||(22343361-22343462)
chr7 (169-270)||(41915741-41915842)
chr7 (169-270)||(18207180-18207280)
chr7 (169-269)||(7727906-7728006)
chr7 (167-223)||(31735882-31735938)
chr7 (169-235)||(10343597-10343663)
chr7 (168-270)||(39255923-39256024)
chr7 (198-263)||(16374830-16374895)
chr7 (169-230)||(35468894-35468955)
chr7 (169-258)||(40846124-40846213)
chr7 (169-238)||(45223042-45223111)
[»] chr6 (20 HSPs)
chr6 (166-270)||(32869675-32869779)
chr6 (167-270)||(17598552-17598655)
chr6 (172-270)||(22880657-22880755)
chr6 (169-270)||(11427616-11427719)
chr6 (169-270)||(6209464-6209565)
chr6 (172-270)||(23128126-23128224)
chr6 (169-270)||(29857827-29857928)
chr6 (169-270)||(31976248-31976349)
chr6 (168-270)||(31109399-31109501)
chr6 (169-258)||(15832577-15832666)
chr6 (169-270)||(31110760-31110859)
chr6 (168-270)||(15508023-15508125)
chr6 (164-270)||(15990041-15990147)
chr6 (173-270)||(28536487-28536582)
chr6 (169-270)||(30341359-30341460)
chr6 (170-270)||(946377-946477)
chr6 (167-270)||(31953029-31953132)
chr6 (174-270)||(9379711-9379807)
chr6 (168-270)||(4231547-4231649)
chr6 (169-234)||(22422053-22422118)
[»] chr1 (31 HSPs)
chr1 (169-269)||(2581915-2582015)
chr1 (168-270)||(9474875-9474977)
chr1 (169-263)||(38632327-38632421)
chr1 (169-270)||(43132-43233)
chr1 (169-270)||(3000319-3000420)
chr1 (169-270)||(50630458-50630559)
chr1 (166-270)||(27564734-27564838)
chr1 (167-270)||(47452319-47452422)
chr1 (168-263)||(48716288-48716383)
chr1 (169-270)||(32813247-32813348)
chr1 (169-270)||(38595154-38595255)
chr1 (169-269)||(51898683-51898783)
chr1 (169-270)||(8346387-8346488)
chr1 (172-288)||(44548358-44548473)
chr1 (169-270)||(41758805-41758906)
chr1 (167-268)||(37649196-37649297)
chr1 (167-283)||(26440732-26440847)
chr1 (195-270)||(13414787-13414862)
chr1 (170-262)||(11152385-11152476)
chr1 (166-269)||(3302533-3302636)
chr1 (172-259)||(26274435-26274522)
chr1 (168-270)||(50590999-50591101)
chr1 (169-270)||(49811526-49811627)
chr1 (168-270)||(41608492-41608594)
chr1 (169-270)||(5958999-5959100)
chr1 (169-270)||(37926437-37926538)
chr1 (167-269)||(6260868-6260970)
chr1 (174-263)||(44453984-44454073)
chr1 (189-270)||(45044559-45044640)
chr1 (218-269)||(48489349-48489400)
chr1 (169-263)||(23597097-23597191)
[»] scaffold1268 (1 HSPs)
scaffold1268 (167-270)||(928-1031)
[»] scaffold1267 (1 HSPs)
scaffold1267 (167-270)||(928-1031)
[»] scaffold0321 (1 HSPs)
scaffold0321 (169-270)||(10108-10209)
[»] scaffold0237 (1 HSPs)
scaffold0237 (169-270)||(4029-4130)
[»] scaffold0110 (1 HSPs)
scaffold0110 (168-270)||(8862-8964)
[»] scaffold0316 (1 HSPs)
scaffold0316 (218-270)||(17103-17155)


Alignment Details
Target: chr2 (Bit Score: 88; Significance: 2e-42; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 13438341 - 13438444
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  13438341 atgagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13438440  T
Q  267 tctc 270  Q
    ||||    
T  13438441 tctc 13438444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 161 - 270
Target Start/End: Complemental strand, 10249490 - 10249381
Alignment:
Q  161 aataatatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagc 260  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| | ||| |||| |||||| ||||||||||||||||||||||||||||||||||||    
T  10249490 aataataagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagc 10249391  T
Q  261 acaatttctc 270  Q
    ||| ||||||    
T  10249390 acactttctc 10249381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 32505748 - 32505648
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  32505748 gagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32505649  T
Q  269 t 269  Q
    |    
T  32505648 t 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 9058475 - 9058581
Alignment:
Q  164 aatatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  9058475 aataagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 9058574  T
Q  264 atttctc 270  Q
     ||||||    
T  9058575 ctttctc 9058581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 28863458 - 28863556
Alignment:
Q  172 taatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctc 28863556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 33436200 - 33436099
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  33436200 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 33436101  T
Q  269 tc 270  Q
    ||    
T  33436100 tc 33436099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 7465835 - 7465734
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||||||||||||||||||||||| || ||||||| ||||| |||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  7465835 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 7465736  T
Q  269 tc 270  Q
    ||    
T  7465735 tc 7465734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 17473020 - 17473121
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||||||||||||||||||||||| || ||||||| ||||| |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  269 tc 270  Q
    ||    
T  17473120 tc 17473121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 40701477 - 40701579
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    |||||||||||||||||||||||||||||| ||||||| | ||| |||| |||||| |||||||||||||||| ||||||||||||||||| |||| |||    
T  40701477 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacacttt 40701576  T
Q  268 ctc 270  Q
    |||    
T  40701577 ctc 40701579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 5574588 - 5574487
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||||||||||||||||| |||||||| ||||||| ||||| |||| |||| | |||||||||||||||||||||||| |||||||||||||| ||||    
T  5574588 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 5574489  T
Q  269 tc 270  Q
    ||    
T  5574488 tc 5574487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 30915463 - 30915564
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| || | |||| | ||||||||||||||||||||||||||||| ||||||||| ||||    
T  30915463 gagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 30915562  T
Q  269 tc 270  Q
    ||    
T  30915563 tc 30915564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 28381758 - 28381654
Alignment:
Q  166 tatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaat 265  Q
    |||||||||||||||||||||||||||||||| ||||||| | ||  |||| |||||| ||||||||||||||||||| ||||| ||||||||||||| |    
T  28381758 tatgagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacact 28381659  T
Q  266 ttctc 270  Q
    |||||    
T  28381658 ttctc 28381654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 19930922 - 19930819
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||| |||  |||||| |||||||||||||||||| ||||||||||||||| |||| ||    
T  19930922 atgaataatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactt 19930823  T
Q  267 tctc 270  Q
    ||||    
T  19930822 tctc 19930819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 27864702 - 27864805
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||| |||  |||||| |||||||||||||| |||||||||||||||| ||||||| ||    
T  27864702 atgagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactt 27864801  T
Q  267 tctc 270  Q
    ||||    
T  27864802 tctc 27864805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 4060684 - 4060785
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    |||||||||||||||||||||||||||||||||||||| | ||| |||  |||||| |||||||||||||||| ||||||| |||||| ||||||| |||    
T  4060684 tgagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacacttt 4060783  T
Q  268 ct 269  Q
    ||    
T  4060784 ct 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 40614004 - 40613901
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||||| |||||||||||||| ||||||||| ||||||| ||||| |||| |||||| ||||||||||||| | ||| ||||||||||||||||||| ||    
T  40614004 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactt 40613905  T
Q  267 tctc 270  Q
    ||||    
T  40613904 tctc 40613901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 20700815 - 20700916
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||| ||||| ||| ||||||| ||||| || |  ||||| ||||||||||||||||||||||||||||||| ||||||| ||||    
T  20700815 gagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 20700914  T
Q  269 tc 270  Q
    ||    
T  20700915 tc 20700916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 36168836 - 36168937
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||| | |||||| |||| |||||||| | ||| ||||||||||||||||| | ||||    
T  36168836 gagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttc 36168935  T
Q  269 tc 270  Q
    ||    
T  36168936 tc 36168937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 38273242 - 38273141
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| ||||||||||||||  ||||| || ||||||| |||||||||| |||||| ||||||||||||||| ||| |||||||||||| |||||| ||||    
T  38273242 gagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttc 38273143  T
Q  269 tc 270  Q
    ||    
T  38273142 tc 38273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 38882913 - 38882831
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggacccc 252  Q
    ||||||||||||||||||||||||||||| ||||| | ||||| |||  |||||| ||||||||||||||||||||||||||||    
T  38882913 gagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccc 38882831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 2533124 - 2533217
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    |||| |||||||||||||| ||||| ||| ||||||||||||| |||| |||||| ||||||||||||||| ||| | |||||||||||||||||    
T  2533124 gagttatgatacatagacatccttaagtggcaatacatcctttgacac-cacacaaaaatctgacacgtagccacatagaccccgcacaagcaca 2533217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 38732354 - 38732455
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||| |||||||||||||| || |||| |||||| |||||||||| || ||||  ||||||||||||||| ||| ||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  269 tc 270  Q
    ||    
T  38732454 tc 38732455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 42257193 - 42257294
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||| | ||||||| ||||||||| ||| |||| |||| | ||||||||||||| | ||| ||||||||||||||||||| ||||    
T  42257193 gagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttc 42257292  T
Q  269 tc 270  Q
    ||    
T  42257293 tc 42257294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 26891604 - 26891503
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| ||||||||||| |||||||||||| ||||||| || |  |||| |||||| |||||||||| || |||||||||||| || ||||||||| ||||    
T  26891604 gagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattttc 26891505  T
Q  269 tc 270  Q
    ||    
T  26891504 tc 26891503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 259
Target Start/End: Original strand, 43490119 - 43490211
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaag 259  Q
    |||||| |||||||||| ||||||||||||||||||||| || || |||| |||||| |||||||||| || | ||  |||||||||||||||    
T  43490119 atgagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 43490211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 17820105 - 17820003
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| |||||||||||||| |  |||||| ||||||| || || |||| |||||| |||||||||| || || ||||||||||| ||||| |||| |||    
T  17820105 tgagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacatttt 17820006  T
Q  268 ctc 270  Q
    |||    
T  17820005 ctc 17820003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 270
Target Start/End: Complemental strand, 45097844 - 45097734
Alignment:
Q  160 taataatatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaag 259  Q
    |||||| | |||| |||||||||| ||| ||||||||| |||||||||| || |||| || ||| |||||||||| || | ||  |||||||||||||||    
T  45097844 taataaaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaag 45097745  T
Q  260 cacaatttctc 270  Q
     ||| ||||||    
T  45097744 tacactttctc 45097734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 17823784 - 17823853
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgta 238  Q
    ||||||||||||||| ||| ||||||||| |||||||| | | ||||| |||||| ||||||||||||||    
T  17823784 gagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgta 17823853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 270
Target Start/End: Original strand, 41575138 - 41575239
Alignment:
Q  170 agtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggacccc-gcacaagcacaatttc 268  Q
    |||||||||||||||||| |||||| ||  |||||| ||||| ||| ||||||| |||| ||||| || |||| |||||||||  |||||||||| ||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  269 tc 270  Q
    ||    
T  41575238 tc 41575239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 3439985 - 3440080
Alignment:
Q  175 tgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||| |||||||||||||||| |||||||  | |  |||| |||||| |||||| ||| ||  | |||||||||||||||||||||| ||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctc 3440080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 33436211 - 33436312
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||| |||||| || ||||||| | ||| |||| |||| | |||||||||||||   || ||||||   ||||||||||| ||||    
T  33436211 gagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacactttc 33436310  T
Q  269 tc 270  Q
    ||    
T  33436311 tc 33436312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 3737987 - 3738043
Alignment:
Q  213 acactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttct 269  Q
    |||| |||||| |||||||||| || |||| |||||||||||||||||||| |||||    
T  3737987 acacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttct 3738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 2997569 - 2997486
Alignment:
Q  187 acccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    ||||||||||| ||||||| || || |||| |||||| |||||||||| || | ||  ||||||||||||||| ||| ||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctc 2997486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 15428840 - 15428775
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgaca 234  Q
    |||| |||||||||| ||| ||||| ||| | ||||| || |||||||||||||| ||||||||||    
T  15428840 gagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgaca 15428775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 50502452 - 50502622
Alignment:
Q  1 ttcattgcctttgtgtaatagtcaggctgtacttatctttttcattgcgtgtgtgccttcagttannnnnnnn-catagaataaatatgcattccattan 99  Q
    |||||||||||||||||||||||  |||| || ||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||     
T  50502452 ttcattgcctttgtgtaatagtccagctgcacatatctttttcattgcgtgtgtgccttcagttatttttttttcatagaataaatatgcattccattat 50502551  T
Q  100 nnnnnn--cagtacgtcaacttttaataagttttttcattcaaatataacctcttctgttgttaataatat 168  Q
            ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50502552 ttatttttcagcacgtcaacttttaataagttttttcattcaaatataacctcttctgttgttaataatat 50502622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 480547 - 480446
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  480547 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 480448  T
Q  269 tc 270  Q
    ||    
T  480447 tc 480446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 42044467 - 42044366
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  42044467 gagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 42044368  T
Q  269 tc 270  Q
    ||    
T  42044367 tc 42044366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 11511563 - 11511461
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| |||| |||| | ||||||||||||||||||||||||||||||||||||||| |||    
T  11511563 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 11511464  T
Q  268 ctc 270  Q
    |||    
T  11511463 ctc 11511461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 48183149 - 48183048
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  48183149 gagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 48183050  T
Q  269 tc 270  Q
    ||    
T  48183049 tc 48183048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 50052528 - 50052427
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  50052528 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50052429  T
Q  269 tc 270  Q
    ||    
T  50052428 tc 50052427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 54473634 - 54473539
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    |||||||||||||||||||||||||||||||||||||| | ||| |||| |||||| |||||| ||||||||||||||||||||||||||||||||    
T  54473634 tgagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 54473539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 6034043 - 6034145
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||| |||||||||| ||||||||||||| |||||||||||||| |||    
T  6034043 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacacttt 6034142  T
Q  268 ctc 270  Q
    |||    
T  6034143 ctc 6034145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 41236347 - 41236448
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||| | ||| |||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  269 tc 270  Q
    ||    
T  41236447 tc 41236448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 3481652 - 3481755
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    ||||||||||||||||||||||| ||||||| |||||||  |||| |||| |||||| ||||||||||| |||||||||||||||| |||||||||| ||    
T  3481652 atgagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactt 3481751  T
Q  267 tctc 270  Q
    ||||    
T  3481752 tctc 3481755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 29234345 - 29234244
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||||||||||||||||||||||| || ||||||| ||||| | ||   |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  29234345 gagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 29234246  T
Q  269 tc 270  Q
    ||    
T  29234245 tc 29234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 29239886 - 29239987
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||| | ||| |||  |||||| |||||| ||||||||||||||||||||| |||||||||| ||||    
T  29239886 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttc 29239985  T
Q  269 tc 270  Q
    ||    
T  29239986 tc 29239987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 31910191 - 31910293
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| |||||||||||||| |||||||||||||||||  |||| |||| |||||| ||||||||||| ||| ||| ||||||||||||||||||| |||    
T  31910191 tgagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacacttt 31910290  T
Q  268 ctc 270  Q
    |||    
T  31910291 ctc 31910293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 23608235 - 23608336
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||| |||||||||||||| |||||||||| | ||| |||| |||||| |||||||||||||||||||||| || || |||||||||| ||||    
T  23608235 gagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttc 23608334  T
Q  269 tc 270  Q
    ||    
T  23608335 tc 23608336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 24995207 - 24995106
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||| || ||||||||||| || ||||||| ||||| |||| |||| | |||| |||||||||||||||||||||||||||||||||| ||||    
T  24995207 gagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttc 24995108  T
Q  269 tc 270  Q
    ||    
T  24995107 tc 24995106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 53352660 - 53352565
Alignment:
Q  174 atgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||||||||||||||||||||| |||||||| |||||||||  ||||| |||||||||||||||| | |||||||||||||||||| | ||||||    
T  53352660 atgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctc 53352565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 262
Target Start/End: Complemental strand, 50526272 - 50526178
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcac 262  Q
    |||||||||||||||||||| | ||||||| ||||||| ||||| |||| |||||| ||||||||||||| ||||||||||  ||||||||||||    
T  50526272 tgagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcac 50526178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 28480360 - 28480265
Alignment:
Q  177 atacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctcct 272  Q
    ||||||||||| |||||||||||||||||    |||||||||||||| |||||||||| ||||||| ||||||||| ||||| |||| ||||||||    
T  28480360 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctcct 28480265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 28481235 - 28481140
Alignment:
Q  177 atacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctcct 272  Q
    ||||||||||| |||||||||||||||||    |||||||||||||| |||||||||| ||||||| ||||||||| ||||| |||| ||||||||    
T  28481235 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctcct 28481140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 28482110 - 28482015
Alignment:
Q  177 atacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctcct 272  Q
    ||||||||||| |||||||||||||||||    |||||||||||||| |||||||||| ||||||| ||||||||| ||||| |||| ||||||||    
T  28482110 atacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctcct 28482015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 288
Target Start/End: Original strand, 41823918 - 41824000
Alignment:
Q  205 atcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctcctcttctctcttcatctc 288  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||| ||||    
T  41823918 atcctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttct-cttttctctcttcttctc 41824000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 29977880 - 29977986
Alignment:
Q  164 aatatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    |||| ||||||||||||||| | | || |||||| ||||||| || ||||||| |||||| ||||||||||||||||||  |||||||| ||||||||||    
T  29977880 aataagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcaca 29977979  T
Q  264 atttctc 270  Q
     ||||||    
T  29977980 ctttctc 29977986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 19670816 - 19670715
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||||||| ||||||| || || ||||||||||| |||||||||| || | ||  ||||||||||||||| ||| ||||    
T  19670816 gagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 19670717  T
Q  269 tc 270  Q
    ||    
T  19670716 tc 19670715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 48647826 - 48647725
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||| ||||| ||| |||||||| |||||||| |  ||||||| |||| | |||||| |||||| ||||||||||| ||||||||||||||||||    
T  48647826 gagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttc 48647727  T
Q  269 tc 270  Q
    ||    
T  48647726 tc 48647725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 47986208 - 47986309
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||||||| |||||||||| || |||  |||||| |||||||||| || | ||  ||||||||||||||| ||| ||||    
T  47986208 gagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 47986307  T
Q  269 tc 270  Q
    ||    
T  47986308 tc 47986309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 40574777 - 40574880
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||||| |||||||||||||| |||||||||  |||||| ||||| |||| |||||| ||||||||||||  |  || |||| |||| ||||||||| ||    
T  40574777 atgagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactt 40574876  T
Q  267 tctc 270  Q
    ||||    
T  40574877 tctc 40574880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 270
Target Start/End: Complemental strand, 50814000 - 50813891
Alignment:
Q  160 taataatatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaag 259  Q
    |||||||| |||| |||||||||| |||| ||||||||  |||||| || || |||| |||||| |||||||||| || ||||  || ||||||||||||    
T  50814000 taataata-gagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaag 50813902  T
Q  260 cacaatttctc 270  Q
     ||| ||||||    
T  50813901 tacactttctc 50813891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 17983825 - 17983742
Alignment:
Q  187 acccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    ||||||||||| ||||||| || || |||| |||||| |||||||||| || | ||  ||||||||||||||| ||| ||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctc 17983742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 255
Target Start/End: Complemental strand, 8343263 - 8343177
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgca 255  Q
    |||| |||||||||| ||| ||||||||| ||||||||||||| ||||  ||| | |||||||||| || | ||  |||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgca 8343177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 9e-39; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 12831047 - 12831148
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  269 tc 270  Q
    ||    
T  12831147 tc 12831148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 15197331 - 15197434
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  15197331 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 15197430  T
Q  267 tctc 270  Q
    ||||    
T  15197431 tctc 15197434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 162 - 263
Target Start/End: Complemental strand, 504228 - 504127
Alignment:
Q  162 ataatatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagca 261  Q
    |||| ||||||||||||||||||||||||||||||| ||||||| | ||| |||| |||||| |||||||||||||||||||||||||||||||||||||    
T  504228 ataaaatgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 504129  T
Q  262 ca 263  Q
    ||    
T  504128 ca 504127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 14547922 - 14548023
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||| |||||||||||||||||||||| ||||||| | ||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  14547922 gagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 14548021  T
Q  269 tc 270  Q
    ||    
T  14548022 tc 14548023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 23122700 - 23122596
Alignment:
Q  166 tatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaat 265  Q
    |||||||||||||||||||||||||||| ||| ||||||| | ||| |||| |||||| ||||||||||||||||||||||||||||||| ||||||| |    
T  23122700 tatgagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacact 23122601  T
Q  266 ttctc 270  Q
    |||||    
T  23122600 ttctc 23122596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 34012399 - 34012295
Alignment:
Q  166 tatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaat 265  Q
    ||||||||||||||||||||||||||||||||  |||||| ||||| |||| |||||| |||| ||||||||||||||||||| |||||||||||||| |    
T  34012399 tatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacact 34012300  T
Q  266 ttctc 270  Q
    |||||    
T  34012299 ttctc 34012295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 40424044 - 40423942
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||| |||  |||||| |||||||||||||||||| |||||||||||||||||||| |||    
T  40424044 tgagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 40423945  T
Q  268 ctc 270  Q
    |||    
T  40423944 ctc 40423942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 10284731 - 10284630
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||||||||| |||||||||||  |||| |||| |||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  10284731 gagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttc 10284632  T
Q  269 tc 270  Q
    ||    
T  10284631 tc 10284630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 44507187 - 44507086
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||||||||||||||||||||||||||  ||||||  ||||||||| |||||| ||||||||||||||||||||||||||||| ||||||| | ||||    
T  44507187 gagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttc 44507088  T
Q  269 tc 270  Q
    ||    
T  44507087 tc 44507086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 37038479 - 37038579
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||| | ||||||| ||||||| ||||| |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  37038479 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 37038578  T
Q  269 t 269  Q
    |    
T  37038579 t 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 1180040 - 1179939
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||||||||||||||||||||||||||  |||||| ||||| |||| |||||| |||||||||||||||||| |||||  ||||||||||||| ||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  269 tc 270  Q
    ||    
T  1179940 tc 1179939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 170 - 270
Target Start/End: Original strand, 5957831 - 5957931
Alignment:
Q  170 agtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttct 269  Q
    ||||||||||||||||||  |||||||| ||||||| ||||| |||| |||||| |||||||||||||||||||||||| ||||||||| |||| |||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttct 5957930  T
Q  270 c 270  Q
    |    
T  5957931 c 5957931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 15048282 - 15048181
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| |||||||||||||| ||||||||| ||||||| ||||| |||| |||||| ||||||||||||||| ||| ||||||||||||||||||| |||    
T  15048282 tgagttatgatacatagacatccttaggtggcaatacaccctttgacac-cacacaaaaatctgacacgtagccacatggaccccgcacaagcacacttt 15048184  T
Q  268 ctc 270  Q
    |||    
T  15048183 ctc 15048181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 43414691 - 43414580
Alignment:
Q  159 ttaataatatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaa 258  Q
    ||||||| |||||| |||||||||||||| |||||| || ||| ||| ||||| |||| |||||| |||||| |||||| ||||| |||| |||||||||    
T  43414691 ttaataaaatgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaa 43414592  T
Q  259 gcacaatttctc 270  Q
    ||||| ||||||    
T  43414591 gcacactttctc 43414580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 8841513 - 8841431
Alignment:
Q  188 cccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||||||| || |||| ||||| |||| |||||| |||||| |||||||||||||||||||||||||||||||| ||||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctc 8841431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 17443825 - 17443914
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaa 258  Q
    |||| |||||||||||||| |||||||||||||||||    |||||||||||||| |||||||||| ||||||| ||||||||| |||||    
T  17443825 gagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaa 17443914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 10621182 - 10621086
Alignment:
Q  174 atgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||||||||||| |||||||||  |||||| ||||| |||| |||||| ||||||||||||||| ||| | || |||||||||||||| ||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 4854963 - 4854862
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||||  ||| | |||||||| | || | ||| ||||||| ||||||||||| ||||    
T  4854963 gagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttc 4854864  T
Q  269 tc 270  Q
    ||    
T  4854863 tc 4854862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 42221515 - 42221616
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||| ||| |||||||||||||||||| | |  |||| |||||| |||||||||||||| |||  ||||||||  ||||||||| ||||    
T  42221515 gagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 42221614  T
Q  269 tc 270  Q
    ||    
T  42221615 tc 42221616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 270
Target Start/End: Original strand, 9122196 - 9122286
Alignment:
Q  170 agtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttct 269  Q
    |||||||||||||||||||||||||||| ||||||| ||          ||||| |||||||||| ||||||||||||| |||||||||||||| |||||    
T  9122196 agtaatgatacatagacacccttaggtggcaatacaccc----------acacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttct 9122285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 16056501 - 16056400
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||| ||||| |||||||||||||| || |||| |||||| |||||||||| || | ||  ||||||||||||||| ||| ||||    
T  16056501 gagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16056402  T
Q  269 tc 270  Q
    ||    
T  16056401 tc 16056400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 16383377 - 16383478
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||||||| ||||||| || || |||| |||||| |||||||||| || | ||  ||||||||||||||| ||| ||||    
T  16383377 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 16383476  T
Q  269 tc 270  Q
    ||    
T  16383477 tc 16383478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 24307893 - 24307792
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||||||| |||||||||| || |||| |||||| |||||||| | || | ||  ||||||||||||||| ||| ||||    
T  24307893 gagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttc 24307794  T
Q  269 tc 270  Q
    ||    
T  24307793 tc 24307792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 14055692 - 14055609
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggacccc 252  Q
    |||| ||||||||| ||||||||||||||||||||||  | || |||  |||||| |||||| ||| |||||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 15259029 - 15258928
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||| || ||||| || |||||||||| |  |||  |||| | |||||||||| || ||||||||||||| ||||||||||| ||||    
T  15259029 gagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttc 15258930  T
Q  269 tc 270  Q
    ||    
T  15258929 tc 15258928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 34307216 - 34307317
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||||||| ||||||| || || |||| |||||| |||||||||| || | ||  || |||||||||||| ||| ||||    
T  34307216 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttc 34307315  T
Q  269 tc 270  Q
    ||    
T  34307316 tc 34307317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 20075037 - 20074966
Alignment:
Q  166 tatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgt 237  Q
    |||||||||||||||||||||| ||||||||| |||||||  |||| |||| |||| | |||| ||||||||    
T  20075037 tatgagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgt 20074966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 24307629 - 24307692
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctga 232  Q
    |||| |||||||||| ||||||||||||| |||||||||| || |||| |||||| ||||||||    
T  24307629 gagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 30183979 - 30183906
Alignment:
Q  165 atatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgta 238  Q
    ||||||||||||||||||| ||| ||||| ||| |||||||| | |  ||||||| ||| |||||||| |||||    
T  30183979 atatgagtaatgatacatatacatccttacgtggcaatacattcctggacactcatacaaaaatctgatacgta 30183906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgaca 234  Q
    |||| |||||||||| ||||||||||||| ||||||| ||||| |||  |||| | ||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 32032725 - 32032766
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctt 210  Q
    |||| |||||||||| ||||||||||||| ||||||||||||    
T  32032725 gagttatgatacataaacacccttaggtggcaatacatcctt 32032766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 9e-39; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 40145403 - 40145508
Alignment:
Q  165 atatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaa 264  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||  |||||| |||||||||||||||||||||||||||||||||||||||     
T  40145403 atatgagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 40145502  T
Q  265 tttctc 270  Q
    ||||||    
T  40145503 tttctc 40145508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 18520981 - 18520883
Alignment:
Q  172 taatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  18520981 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctc 18520883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 13811652 - 13811753
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||| |||||||||||||||||||||| ||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  13811652 gagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13811751  T
Q  269 tc 270  Q
    ||    
T  13811752 tc 13811753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 2740274 - 2740375
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||| |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  2740274 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 2740373  T
Q  269 tc 270  Q
    ||    
T  2740374 tc 2740375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 36733042 - 36732941
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||  ||||||| ||||| |||| |||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  36733042 gagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttc 36732943  T
Q  269 tc 270  Q
    ||    
T  36732942 tc 36732941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 33149741 - 33149637
Alignment:
Q  166 tatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaat 265  Q
    ||||||||||||||||||||||||||||||||  |||||| ||||| |||| |||||| |||| ||||||||||||||||||| |||||||||||||| |    
T  33149741 tatgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacact 33149642  T
Q  266 ttctc 270  Q
    |||||    
T  33149641 ttctc 33149637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 14831812 - 14831914
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||| |||| |||| | |||||||||||||||||||||||| |||||||||||||| ||    
T  14831812 atgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 14831911  T
Q  267 tct 269  Q
    |||    
T  14831912 tct 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 263
Target Start/End: Complemental strand, 42414404 - 42414308
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    |||||||||||||||||||||||  |||||| ||||||| ||||| |||| |||||| |||||||||||||||||| ||||||||||||||||||||    
T  42414404 atgagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 42414308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 15409710 - 15409616
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    |||| |||||||||||||| |||||||||||||||||| |||| |||| |||||| ||||||||||||||| ||| |||||||||||||||||||    
T  15409710 gagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcaca 15409616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 35785198 - 35785300
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    |||||||||||||||||||||||||||||| ||||||| | ||| |||| |||||| |||||||||||||||| ||||||| ||||||||| |||| |||    
T  35785198 tgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacacttt 35785297  T
Q  268 ctc 270  Q
    |||    
T  35785298 ctc 35785300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 35943992 - 35943891
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||||||||||| ||||||| ||| |||||||||| ||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  269 tc 270  Q
    ||    
T  35943892 tc 35943891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 31008988 - 31009088
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||| |||||||||||||||||| |||  |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  31008988 gagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 31009087  T
Q  269 t 269  Q
    |    
T  31009088 t 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 28177773 - 28177876
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||||| |||||||||||||| ||||||||| ||||||| ||||| |||| |||||| ||||||||||||| ||||| |||||||||||||| |||| ||    
T  28177773 atgagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactt 28177872  T
Q  267 tctc 270  Q
    ||||    
T  28177873 tctc 28177876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 169 - 260
Target Start/End: Complemental strand, 41470516 - 41470425
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagc 260  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||||| | ||| | | ||||||||||||||||||||||||||||||||||||    
T  41470516 gagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 26720515 - 26720617
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| |||||||||||||| ||||||||| ||||||| ||||||||||  ||| | ||||||||||||| | ||| |||| |||||||||||||| |||    
T  26720515 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26720614  T
Q  268 ctc 270  Q
    |||    
T  26720615 ctc 26720617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 26990264 - 26990366
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| |||||||||||||| ||||||||| ||||||| ||||||||||  ||| | ||||||||||||| | ||| |||| |||||||||||||| |||    
T  26990264 tgagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacacttt 26990363  T
Q  268 ctc 270  Q
    |||    
T  26990364 ctc 26990366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 6679698 - 6679799
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||| | ||||||| ||||||| | ||| |||| |||||| ||||||||||||| ||||| |||||||||||||| |||| ||||    
T  6679698 gagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttc 6679797  T
Q  269 tc 270  Q
    ||    
T  6679798 tc 6679799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 6260102 - 6260000
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    |||||||||||||||| ||| || |||||||||||||| |||||||||| ||| || |||||| |||| | ||||| |||||| | || ||||||| |||    
T  6260102 tgagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacacttt 6260003  T
Q  268 ctc 270  Q
    |||    
T  6260002 ctc 6260000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 3921365 - 3921264
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||||||| ||||||| || || |||| |||||| |||||||||| || | ||  ||||||||||||||| ||| ||||    
T  3921365 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 3921266  T
Q  269 tc 270  Q
    ||    
T  3921265 tc 3921264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||| ||||||| | |||| |||||||||| ||||| ||||||||| | ||||||  |||||   ||||||||||| ||||||||||| ||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  269 t 269  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 36875702 - 36875611
Alignment:
Q  170 agtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttct 269  Q
    |||||||||||||||||||||||||||| ||||||| ||||| |||| |||||| |||         |||||||||||| |||||||||||||| |||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaa---------tagtcacgtggatcccgcacaagcacactttct 36875612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 2252268 - 2252167
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||| ||||||||| ||||||| || || |||| |||||| |||||||||| || | ||  ||||||||||||||| ||| ||||    
T  2252268 gagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 2252169  T
Q  269 tc 270  Q
    ||    
T  2252168 tc 2252167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 31132393 - 31132436
Alignment:
Q  218 cacacataaatctgacacgtagtcacgtggaccccgcacaagca 261  Q
    |||||| |||||||||| ||||||||||||||||||||||||||    
T  31132393 cacacaaaaatctgacaagtagtcacgtggaccccgcacaagca 31132436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 9603813 - 9603914
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||| ||| |||||||||| ||||||  | || ||||  ||||| ||||||||||| | ||||  ||||||||  |||| |||| ||||    
T  9603813 gagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactttc 9603912  T
Q  269 tc 270  Q
    ||    
T  9603913 tc 9603914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 16327902 - 16327995
Alignment:
Q  170 agtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    |||||||||| ||| | | ||||||||| |||||||||| || |||| |||| | |||||||||||||  ||| ||| ||| | ||||||||||    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcaca 16327995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 21370060 - 21370105
Alignment:
Q  225 aaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||||||| || |||||||||||||||||||| |||| ||||||    
T  21370060 aaatctgacatgtggtcacgtggaccccgcacaaacacattttctc 21370105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 38296203 - 38296304
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||   |||||||| ||||||| |  |||| || |||||| ||||| |||||||||  ||||||| ||  |||||||||| ||||    
T  38296203 gagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacactttc 38296302  T
Q  269 tc 270  Q
    ||    
T  38296303 tc 38296304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 9e-39; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 53982007 - 53982112
Alignment:
Q  165 atatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaa 264  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||     
T  53982007 atatgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 53982106  T
Q  265 tttctc 270  Q
    ||||||    
T  53982107 tttctc 53982112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 33644199 - 33644301
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  33644199 tgagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 33644298  T
Q  268 ctc 270  Q
    |||    
T  33644299 ctc 33644301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 17470405 - 17470506
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||| ||||||| ||||||| | |||||||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  17470405 gagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 17470504  T
Q  269 tc 270  Q
    ||    
T  17470505 tc 17470506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 49607414 - 49607515
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||| |||||||||||||||||||||||| ||| |||||||||| ||||    
T  49607414 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttc 49607513  T
Q  269 tc 270  Q
    ||    
T  49607514 tc 49607515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 52629305 - 52629401
Alignment:
Q  174 atgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||||||||||||||||||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||| ||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctc 52629401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 8076393 - 8076494
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||| ||||||||||||| || |||| ||||| |||| |||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  269 tc 270  Q
    ||    
T  8076493 tc 8076494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 27714991 - 27714890
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||| |||||||  |||||| ||||| |||| |||||| |||||||||||||||||| |||||||||||||||||||| ||||    
T  27714991 gagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 27714892  T
Q  269 tc 270  Q
    ||    
T  27714891 tc 27714890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 54868995 - 54868894
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||| | ||| |||| |||||| |||||||||||||||| ||||||||||||||||| |||| ||||    
T  54868995 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 54868896  T
Q  269 tc 270  Q
    ||    
T  54868895 tc 54868894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 26141635 - 26141531
Alignment:
Q  166 tatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaat 265  Q
    ||||||| |||||||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||| ||||| |||||||| |||||||||| |    
T  26141635 tatgagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacact 26141536  T
Q  266 ttctc 270  Q
    |||||    
T  26141535 ttctc 26141531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 170 - 270
Target Start/End: Original strand, 31456690 - 31456790
Alignment:
Q  170 agtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttct 269  Q
    ||||||||||||||||||||| |||| | ||||||| ||||| |||| |||||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttct 31456789  T
Q  270 c 270  Q
    |    
T  31456790 c 31456790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 51419460 - 51419359
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||||| |||||| ||||||||||||| | ||| | ||||||||||||||||| ||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  269 tc 270  Q
    ||    
T  51419360 tc 51419359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 11095453 - 11095354
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||| |||||||||||||||||||||  |||||||| || |||| ||||    
T  11095453 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactttc 11095356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 11907371 - 11907472
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| ||||||||||||||||||||||||||||||||  | | |||||||||||| |||||||||| || ||||  ||||||||||||||||||| ||||    
T  11907371 gagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttc 11907470  T
Q  269 tc 270  Q
    ||    
T  11907471 tc 11907472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 33118951 - 33118850
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||| |||||| |||| ||||||||||||||||||| ||| || || |||| ||||    
T  33118951 gagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttc 33118852  T
Q  269 tc 270  Q
    ||    
T  33118851 tc 33118850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 283
Target Start/End: Complemental strand, 48587187 - 48587078
Alignment:
Q  173 aatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctcct 272  Q
    ||||||||||||| ||||||||||| ||||||| ||||| ||||  ||| | |||||||||||||||||||||||| |||||||||| ||| ||||| ||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttct-ct 48587089  T
Q  273 cttctctcttc 283  Q
     ||||||||||    
T  48587088 tttctctcttc 48587078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 11348022 - 11347921
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||| ||||||||||||||||||||||| |||  |||||| ||||||||||||| | ||| ||||||| ||| ||||||| ||||    
T  11348022 gagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttc 11347923  T
Q  269 tc 270  Q
    ||    
T  11347922 tc 11347921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 36707524 - 36707439
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgc 254  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||  |||||| |||||||||||||||| ||||||| |||||    
T  36707524 gagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 30801834 - 30801732
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    |||| |||||||||||||||||||||||||| |||||| ||||| | || |||||| |||| ||||| |||||||  |||||||| |||||||||| |||    
T  30801834 tgagcaatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacatttt 30801735  T
Q  268 ctc 270  Q
    |||    
T  30801734 ctc 30801732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 174 - 270
Target Start/End: Original strand, 26754700 - 26754796
Alignment:
Q  174 atgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    ||||| |||||||||||||||||| ||||||| ||||  |||  |||||| |||||||||| || ||||| ||||||||||||||||||| ||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctc 26754796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 280
Target Start/End: Original strand, 9562999 - 9563109
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||| ||||| |||| |||||||||| ||||| |||  || | | |||||||||||||||||||||||| || |||||| |||| ||||    
T  9562999 gagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttc 9563098  T
Q  269 tcctcttctctc 280  Q
    | ||||||||||    
T  9563099 t-ctcttctctc 9563109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 20765016 - 20764914
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| |||| ||||||||| |||||||||  ||||||  ||||||||| |||||| ||||||||||||| | ||| ||||||||| ||||||||| |||    
T  20765016 tgagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacacttt 20764917  T
Q  268 ctc 270  Q
    |||    
T  20764916 ctc 20764914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 41189864 - 41189763
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||| ||||||||| ||||||||| ||| |||| |||| | |||| |||||||| | ||| ||||||||||||||||||| ||||    
T  41189864 gagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttc 41189765  T
Q  269 tc 270  Q
    ||    
T  41189764 tc 41189763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 14623939 - 14623838
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||| ||||||||| ||||||| || || |||| |||| | |||||||||| ||  ||| ||||||| | |||||||||| ||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  269 tc 270  Q
    ||    
T  14623839 tc 14623838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 48375806 - 48375705
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| ||||| |||||||||||||||||||||||||| || | || |  || ||| |||||||||  || ||||| ||||||||||||||||||| ||||    
T  48375806 gagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttc 48375707  T
Q  269 tc 270  Q
    ||    
T  48375706 tc 48375705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 8956762 - 8956856
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||| |||| |||| | |||| ||||||||  ||| |||||||   ||||||||||    
T  8956762 gagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcaca 8956856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 24700054 - 24699953
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||| |||||| || ||||||| | ||| |||| |||| | ||||||| ||||| | ||||||||||| | |||| |||| ||||    
T  24700054 gagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttc 24699955  T
Q  269 tc 270  Q
    ||    
T  24699954 tc 24699953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 47531865 - 47531966
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||| |||||| || ||||||| | |||||||  ||||||  |||||||||||| | ||  || |||||||||||||||| ||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  269 tc 270  Q
    ||    
T  47531965 tc 47531966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 13898154 - 13898054
Alignment:
Q  170 agtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttct 269  Q
    |||||||||| ||| ||| ||||||||| ||||||| || || |||| |||| | |||||||||||||  ||| ||||||| | |||||||||| |||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  270 c 270  Q
    |    
T  13898054 c 13898054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 35965874 - 35965806
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgt 237  Q
    ||||||||||||||| ||| ||||| |||| |||||||||||| |||| |||| | |||||||||||||    
T  35965874 gagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 35536626 - 35536720
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    ||||||||||||||||||| ||||| ||| ||||||| | ||| |||| |||| | |||| |||||||| |||| |||||||   ||||||||||    
T  35536626 gagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcaca 35536720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 45320385 - 45320450
Alignment:
Q  184 gacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggac 249  Q
    |||| ||||| |||||||||||  | |||||||||||||| |||||||| ||||||| | ||||||    
T  45320385 gacaaccttaagtgacaatacactcattaacactcacacaaaaatctgatacgtagttatgtggac 45320450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 29202910 - 29202855
Alignment:
Q  110 acgtcaacttttaataagttttttcattcaaatataacctcttctgttgttaataatat 168  Q
    |||||||||||||||||  ||||||||||| |||||    |||||||||||||||||||    
T  29202910 acgtcaacttttaataaaatttttcattcagatata---ccttctgttgttaataatat 29202855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 6e-37; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 38267039 - 38267141
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    |||||||||||||||||||||||||| ||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  38267039 tgagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 38267138  T
Q  268 ctc 270  Q
    |||    
T  38267139 ctc 38267141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 36362013 - 36361912
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  36362013 gagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36361914  T
Q  269 tc 270  Q
    ||    
T  36361913 tc 36361912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 7389389 - 7389490
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| |||||||  |||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  7389389 gagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 7389488  T
Q  269 tc 270  Q
    ||    
T  7389489 tc 7389490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 36362026 - 36362127
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||||||||||||||||||||||||||  |||||||||||| |||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  36362026 gagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttc 36362125  T
Q  269 tc 270  Q
    ||    
T  36362126 tc 36362127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 32951592 - 32951492
Alignment:
Q  170 agtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttct 269  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||||||||| |||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  270 c 270  Q
    |    
T  32951492 c 32951492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 172 - 270
Target Start/End: Original strand, 3783998 - 3784096
Alignment:
Q  172 taatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||||||||||||||||||||||| ||||||||| ||| |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctc 3784096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 8080483 - 8080382
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| ||||  ||| | ||||||||||||||||||||||||||||||||||||||| ||||    
T  8080483 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 8080384  T
Q  269 tc 270  Q
    ||    
T  8080383 tc 8080382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 38837217 - 38837318
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||| ||||  ||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  38837217 gagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38837316  T
Q  269 tc 270  Q
    ||    
T  38837317 tc 38837318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 19329840 - 19329943
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    ||||||||||||||||||||| ||||||||| ||||||| | ||| |||| |||||| |||||||||||||| |||||||||||||||||||||||| ||    
T  19329840 atgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactt 19329939  T
Q  267 tctc 270  Q
    ||||    
T  19329940 tctc 19329943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 35137531 - 35137634
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    ||||||||||||| ||||||||||||||||| ||||||| ||||| |||| |||||| |||||| ||||||||||||||||||||||||||| |||| ||    
T  35137531 atgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactt 35137630  T
Q  267 tctc 270  Q
    ||||    
T  35137631 tctc 35137634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 169 - 283
Target Start/End: Original strand, 3434562 - 3434675
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||| |||| |||||| ||| |||||||||||||||||||| |||||||||||||| ||||    
T  3434562 gagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttc 3434661  T
Q  269 tcctcttctctcttc 283  Q
    | || ||||||||||    
T  3434662 t-cttttctctcttc 3434675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 19436287 - 19436186
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||| ||||||||||||||||| | ||| |||| |||||| |||||||||||||||||||||||| |||||| ||||||| ||||    
T  19436287 gagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttc 19436188  T
Q  269 tc 270  Q
    ||    
T  19436187 tc 19436186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 3694365 - 3694468
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||| |||||||| ||| ||||||||||||||||||||| | |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||| ||    
T  3694365 atgaataatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactt 3694464  T
Q  267 tctc 270  Q
    ||||    
T  3694465 tctc 3694468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 21234399 - 21234502
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||| |||||||||| ||| || |||||||||||||||| ||    
T  21234399 atgagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattt 21234498  T
Q  267 tctc 270  Q
    ||||    
T  21234499 tctc 21234502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 4999614 - 4999513
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||||||||||||||||||||||| || ||||||| | ||| |||| |||||| |||||||| ||||||||||||||||||||||||| |||| ||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  269 tc 270  Q
    ||    
T  4999514 tc 4999513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 40957707 - 40957808
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||||||||||||||||| |||||||| |||||||  |||| | || |||||| |||||||||||||||||||||||| |||| ||||||||| ||||    
T  40957707 gagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttc 40957806  T
Q  269 tc 270  Q
    ||    
T  40957807 tc 40957808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    |||| |||||||||||||| ||||||||| ||| ||| |||||||||| |||||| ||||||||||||| | ||| |||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 36208173 - 36208274
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| ||||||||||||||||||||||||  ||||||| | || |||| |||||| ||| |||||| || ||||||||||||| ||||||||||| ||||    
T  36208173 gagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttc 36208272  T
Q  269 tc 270  Q
    ||    
T  36208273 tc 36208274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 8238210 - 8238314
Alignment:
Q  167 atgagtaatgatacatagacaccct-taggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaat 265  Q
    |||||| |||||||||| ||||||| |||||| ||||||| ||||| |||| |||||| |||||||||| |||||||  ||||||||||||||| ||| |    
T  8238210 atgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacact 8238309  T
Q  266 ttctc 270  Q
    |||||    
T  8238310 ttctc 8238314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 11044188 - 11044279
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||| |          ||||||||||||||||||||||||||||||| ||| ||||    
T  11044188 gagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacactttc 11044277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 288
Target Start/End: Original strand, 35522881 - 35522994
Alignment:
Q  174 atgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctcctc 273  Q
    |||||||||||||| ||||| ||| ||||||| | |||||||| |||||| ||||||||||||| | ||  |||| |||||||||||||| ||||| ||     
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct-ctt 35522979  T
Q  274 ttctctcttcatctc 288  Q
    |||||||||| ||||    
T  35522980 ttctctcttcttctc 35522994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 26296644 - 26296745
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||| ||||||||||||||| | |||||||||  |||| | |||||||| |||| | ||  |||||||||||||||| || ||||    
T  26296644 gagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattttc 26296743  T
Q  269 tc 270  Q
    ||    
T  26296744 tc 26296745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 38044197 - 38044298
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||||||| ||||||| || || |||  |||||| |||||||||| |||| ||  ||||||||||||||| ||| ||||    
T  38044197 gagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttc 38044296  T
Q  269 tc 270  Q
    ||    
T  38044297 tc 38044298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 46033901 - 46033800
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||| |  |||||||| ||||||| |||||||||| |||| | ||||||||||||| ||||| || || ||||||||||| | ||||    
T  46033901 gagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttc 46033802  T
Q  269 tc 270  Q
    ||    
T  46033801 tc 46033800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 22343361 - 22343462
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||||||| ||||||| || || |||| |||||| |||||||||| ||   ||  ||||||||||||||| ||| ||||    
T  22343361 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttc 22343460  T
Q  269 tc 270  Q
    ||    
T  22343461 tc 22343462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 41915741 - 41915842
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||||||| ||||||| || || ||||  ||||| |||||||||| || | ||  ||||||||||||||| ||| ||||    
T  41915741 gagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 41915840  T
Q  269 tc 270  Q
    ||    
T  41915841 tc 41915842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 18207180 - 18207280
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||| ||||||||| ||||||| |  || |||| || ||| |||||| |||||| | |||||| ||||| |||||||||| ||||    
T  18207180 gagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcacactttc 18207278  T
Q  269 tc 270  Q
    ||    
T  18207279 tc 18207280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 7727906 - 7728006
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| |||||||||||||  |||||| |  || ||| ||||| | |||||||||| || ||||  ||||||||||||||| ||| ||||    
T  7727906 gagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 7728005  T
Q  269 t 269  Q
    |    
T  7728006 t 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 31735882 - 31735938
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacaca 223  Q
    |||||| |||||||||||||| ||||||||| |||||||  ||||||||| ||||||    
T  31735882 atgagttatgatacatagacatccttaggtggcaatacactctttaacacccacaca 31735938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 10343663 - 10343597
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacac 235  Q
    |||||||||||||||||||||||||||||  ||||||    || |||| |||||| |||||||||||    
T  10343663 gagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 39256024 - 39255923
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| |||||||||||||| ||||||||| ||||||| |  || | || || ||| ||||||||||||| | ||||||||| || |||||| ||| |||    
T  39256024 tgagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaagaacacttt 39255926  T
Q  268 ctc 270  Q
    |||    
T  39255925 ctc 39255923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 16374895 - 16374830
Alignment:
Q  198 acaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    ||||||||||| || |||  |||||| ||||||||||||| |||||||||| | | ||||||||||    
T  16374895 acaatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcaca 16374830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 35468955 - 35468894
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatct 230  Q
    ||||||||||||||||||| |||||| || ||||||||| ||| |||| |||| | ||||||    
T  35468955 gagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatct 35468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 40846213 - 40846124
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaa 258  Q
    |||| |||||||||| ||| ||||||||| ||||||| || || |||  |||||| |||||| ||| ||||| |  ||||||||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaa 40846124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 238
Target Start/End: Original strand, 45223042 - 45223111
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgta 238  Q
    ||||||||||| ||| ||| ||||||||| |||||||| ||| ||||   ||||| ||||||||||||||    
T  45223042 gagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgta 45223111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 9e-36; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 32869675 - 32869779
Alignment:
Q  166 tatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaat 265  Q
    ||||||||| |||||||||||||||||||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| |    
T  32869675 tatgagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 32869774  T
Q  266 ttctc 270  Q
    |||||    
T  32869775 ttctc 32869779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 167 - 270
Target Start/End: Original strand, 17598552 - 17598655
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||| ||    
T  17598552 atgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactt 17598651  T
Q  267 tctc 270  Q
    ||||    
T  17598652 tctc 17598655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 22880755 - 22880657
Alignment:
Q  172 taatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||| |||||| || |||||||||||||||||||||||||||||||||||| ||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctc 22880657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 11427616 - 11427719
Alignment:
Q  169 gagtaatgatacatagacaccct--taggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||||||||||||||||||||||  |||||| ||||||||||||| |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||    
T  11427616 gagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 11427715  T
Q  267 tctc 270  Q
    ||||    
T  11427716 tctc 11427719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 6209565 - 6209464
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| |||||||   ||| ||||||||||| ||||||| |||||||||||||||||||||||| |||||| ||||    
T  6209565 gagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttc 6209466  T
Q  269 tc 270  Q
    ||    
T  6209465 tc 6209464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 270
Target Start/End: Complemental strand, 23128224 - 23128126
Alignment:
Q  172 taatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||||| ||||||||| ||| |||| |||||||||||| |||| |||||| |||||||||||||||||||||||| ||| |||||||||| ||||||    
T  23128224 taatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctc 23128126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 29857827 - 29857928
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||| |||| || ||||||| | |||||||| |||||| |||||||||||||||| ||||||| |||||| ||||||| ||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  269 tc 270  Q
    ||    
T  29857927 tc 29857928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 31976248 - 31976349
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||| ||||||||| ||||| | |||||||||| |||||| ||||||||||||| ||||| || |||||||||||||||| ||||    
T  31976248 gagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttc 31976347  T
Q  269 tc 270  Q
    ||    
T  31976348 tc 31976349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 31109501 - 31109399
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    |||||||||||  ||||||||||||||||| ||||||| ||||| |||  |||||| ||||||||||||||||||||| ||||||||| ||| ||| |||    
T  31109501 tgagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacacttt 31109402  T
Q  268 ctc 270  Q
    |||    
T  31109401 ctc 31109399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 15832577 - 15832666
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaa 258  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||| |||| |||||| |||| ||||||||||||||||||| || ||||||    
T  15832577 gagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 31110859 - 31110760
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||| ||||||||| ||||||| ||||| |||||  |||| ||||||||||||||  ||| ||||||| ||||||||||| ||||    
T  31110859 gagttatgatacatagacatccttaggtggcaatacaccctttgacact--cacaaaaatctgacacgtaaccacatggaccctgcacaagcacactttc 31110762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 15508125 - 15508023
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| |||||||||| ||||||||||||| ||||||| || || |||| |||||| |||||||||| || | ||  ||||||||||||||| ||| |||    
T  15508125 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 15508026  T
Q  268 ctc 270  Q
    |||    
T  15508025 ctc 15508023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 15990147 - 15990041
Alignment:
Q  164 aatatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    |||| |||| |||||||||| ||||||||||||| ||||||| || || |||| |||||| |||||||||| || | ||  ||||||||||||||| |||    
T  15990147 aataagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtaca 15990048  T
Q  264 atttctc 270  Q
     ||||||    
T  15990047 ctttctc 15990041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 270
Target Start/End: Complemental strand, 28536582 - 28536487
Alignment:
Q  173 aatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    ||||||||||| ||| ||||||||| ||||||| || || |||| |||||| ||||||||||||  |||| ||||||||| |||||||||| ||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctc 28536487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 30341460 - 30341359
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||||||| ||||||| || || |||| |||||| |||||||||| || | ||  ||||||||||||||| ||| ||||    
T  30341460 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 30341361  T
Q  269 tc 270  Q
    ||    
T  30341360 tc 30341359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 270
Target Start/End: Original strand, 946377 - 946477
Alignment:
Q  170 agtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttct 269  Q
    ||||| |||||||||||| |||||||||| |||||| ||||| ||||  || || ||||||||||| |||||||||  | ||||| | |||||| |||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttct 946476  T
Q  270 c 270  Q
    |    
T  946477 c 946477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 31953132 - 31953029
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    ||||||||||||| ||||||| ||||||||| ||||||| || || |||| |||| | |||||||||| ||  ||| ||||||| | ||||| |||| ||    
T  31953132 atgagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactt 31953033  T
Q  267 tctc 270  Q
    ||||    
T  31953032 tctc 31953029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 9379807 - 9379711
Alignment:
Q  174 atgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||||||||||| |||||| ||||||||||||| || |||| || ||| |||| |||||||| | || ||||| | | ||||| |||| ||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctc 9379711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 4231547 - 4231649
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| ||||| |||| ||| | ||||||| ||||||| || ||  ||| |||||| ||||||||||||| | ||  ||||||||||||||| ||| |||    
T  4231547 tgagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacacttt 4231646  T
Q  268 ctc 270  Q
    |||    
T  4231647 ctc 4231649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 22422118 - 22422053
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgaca 234  Q
    ||||||||||||||||||| ||||||||| ||||| |||  || ||||||| ||| || |||||||    
T  22422118 gagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 9e-36; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 169 - 269
Target Start/End: Original strand, 2581915 - 2582015
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  2581915 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 2582014  T
Q  269 t 269  Q
    |    
T  2582015 t 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 9474977 - 9474875
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    |||||||||||||||||||||||||||||| ||||||| ||||| |||| |||||| |||||||||||||||||||||||||||||||||| |||| |||    
T  9474977 tgagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacacttt 9474878  T
Q  268 ctc 270  Q
    |||    
T  9474877 ctc 9474875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 38632421 - 38632327
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  38632421 gagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 43132 - 43233
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||||||||||||||||  |||||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||| ||||||||||||| ||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  269 tc 270  Q
    ||    
T  43232 tc 43233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 3000319 - 3000420
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  269 tc 270  Q
    ||    
T  3000419 tc 3000420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 50630458 - 50630559
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||| ||||||||||| |||||||||||||   || |||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  50630458 gagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 50630557  T
Q  269 tc 270  Q
    ||    
T  50630558 tc 50630559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 27564838 - 27564734
Alignment:
Q  166 tatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaat 265  Q
    |||||||||||||||||||||| ||||||||| ||||||| | ||| |||| |||||| |||||||||||||| |||||||||||||||||||||||| |    
T  27564838 tatgagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacact 27564739  T
Q  266 ttctc 270  Q
    |||||    
T  27564738 ttctc 27564734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 47452422 - 47452319
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||||||||||||||||||||||||||||||  |||||| ||||| |||| |||||| |||||| ||||||||||||||||| |||||||||||||| ||    
T  47452422 atgagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactt 47452323  T
Q  267 tctc 270  Q
    ||||    
T  47452322 tctc 47452319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 48716383 - 48716288
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    |||||||||||||||||||||||||||||| ||||||| | ||| |||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  48716383 tgagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 48716288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 32813247 - 32813348
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||| ||||||||| ||||||| |||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||||| ||||    
T  32813247 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttc 32813346  T
Q  269 tc 270  Q
    ||    
T  32813347 tc 32813348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 38595154 - 38595255
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||| ||||| ||||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  38595154 gagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 38595253  T
Q  269 tc 270  Q
    ||    
T  38595254 tc 38595255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 51898783 - 51898683
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||| | ||||||| ||||||| ||||| |||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||    
T  51898783 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 51898684  T
Q  269 t 269  Q
    |    
T  51898683 t 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 8346488 - 8346387
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||||||||||||||| |||| ||||||| ||||||| | ||| |||| |||||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  8346488 gagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttc 8346389  T
Q  269 tc 270  Q
    ||    
T  8346388 tc 8346387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 172 - 288
Target Start/End: Complemental strand, 44548473 - 44548358
Alignment:
Q  172 taatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctcc 271  Q
    |||||||||||||||| | ||||||| ||||||| | ||| | || |||||| ||||||||||||||||||||||||||||||||||||||| ||||| |    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct-c 44548375  T
Q  272 tcttctctcttcatctc 288  Q
    | |||||||||| ||||    
T  44548374 ttttctctcttcttctc 44548358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 41758805 - 41758906
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||| |||  || ||||||| ||||| |||  |||||| ||||||||||||||||||| |||||||||||||| |||| ||||    
T  41758805 gagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttc 41758904  T
Q  269 tc 270  Q
    ||    
T  41758905 tc 41758906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 268
Target Start/End: Original strand, 37649196 - 37649297
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    ||||||||||||||||||||| | ||||||| |||||||  |||| |||| |||||| ||||||||||||| |||||||| |  ||||||||||||| ||    
T  37649196 atgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactt 37649295  T
Q  267 tc 268  Q
    ||    
T  37649296 tc 37649297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 283
Target Start/End: Original strand, 26440732 - 26440847
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||||| | |||| ||||||| |||||| |||||||||| |||||||||| |||||| ||||||||||||| | ||| |||| |||||| ||||||| ||    
T  26440732 atgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactt 26440831  T
Q  267 tctcctcttctctcttc 283  Q
    ||| || ||||||||||    
T  26440832 tct-cttttctctcttc 26440847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 13414787 - 13414862
Alignment:
Q  195 gtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    ||||||||||| ||||| |||| |||||| |||||| ||||||||||||||||||||| |||||||||| ||||||    
T  13414787 gtgacaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctc 13414862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 262
Target Start/End: Complemental strand, 11152476 - 11152385
Alignment:
Q  170 agtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcac 262  Q
    |||||||| ||||||||||| ||||||| ||||||| ||||  |||  |||||| |||||||||||||||||| || ||||||||||||||||    
T  11152476 agtaatgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcac 11152385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 269
Target Start/End: Complemental strand, 3302636 - 3302533
Alignment:
Q  166 tatgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaat 265  Q
    |||||||||||||||||| ||| ||||||||||||||| || | |  |||| |||||| |||||||||||||| |||  ||||||||  ||||||||| |    
T  3302636 tatgagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacact 3302537  T
Q  266 ttct 269  Q
    ||||    
T  3302536 ttct 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 259
Target Start/End: Original strand, 26274435 - 26274522
Alignment:
Q  172 taatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaag 259  Q
    |||||||||||||||||||||| ||| ||||||||| ||| |||  |||| | ||||||||||| |||||||||||| || |||||||    
T  26274435 taatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 50591101 - 50590999
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| |||||||||| ||||||||||||| ||||||| || || |||| |||||| |||||||||| || | ||  ||||||||||||||| ||| |||    
T  50591101 tgagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 50591002  T
Q  268 ctc 270  Q
    |||    
T  50591001 ctc 50590999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 49811627 - 49811526
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||| ||||||| ||||||||||||||||| | ||| |||  |||||| ||||||||||||||| ||  | ||| ||||||||||||| ||||    
T  49811627 gagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttc 49811528  T
Q  269 tc 270  Q
    ||    
T  49811527 tc 49811526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 41608594 - 41608492
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| |||||||||| ||| ||||||||| ||||||| || || ||||||||||| |||||||||| || | ||  ||||||||| ||||| ||| |||    
T  41608594 tgagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacacttt 41608495  T
Q  268 ctc 270  Q
    |||    
T  41608494 ctc 41608492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 5959100 - 5958999
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||| ||||||||| ||| ||||||| |  || |||| |||||| |||||||||| || ||||  ||||||||||||||| ||| ||||    
T  5959100 gagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 5959001  T
Q  269 tc 270  Q
    ||    
T  5959000 tc 5958999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 37926538 - 37926437
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||| | | ||||||| ||||||||| |||||||| |||| | ||||||||||||| | ||| |||| |||| ||||| ||| ||||    
T  37926538 gagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttc 37926439  T
Q  269 tc 270  Q
    ||    
T  37926438 tc 37926437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 269
Target Start/End: Original strand, 6260868 - 6260970
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    |||||| |||||| ||||| | |||||||||  |||||| || | ||||| |||| | |||||| ||| || ||||||||||||||||| ||||||| ||    
T  6260868 atgagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattt 6260967  T
Q  267 tct 269  Q
    |||    
T  6260968 tct 6260970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 44453984 - 44454073
Alignment:
Q  174 atgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    |||||||||||||||| ||| ||| |||||||||  || | || |||||| |||||||||| || || ||||||| ||| ||||||||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcaca 44454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 270
Target Start/End: Complemental strand, 45044640 - 45044559
Alignment:
Q  189 ccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    ||||||||| ||||||| | ||| |||| || ||| |||||||||| |||| ||| |||||||||||||| |||| ||||||    
T  45044640 ccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctc 45044559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 48489349 - 48489400
Alignment:
Q  218 cacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttct 269  Q
    |||||| |||||||||| || |||||||||| |||||||||||||| |||||    
T  48489349 cacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 263
Target Start/End: Complemental strand, 23597191 - 23597097
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcaca 263  Q
    ||||||||||||||||||| | ||||||| |||||||  |||| | || |||| | ||||||||||||| | ||||| ||||  |||||| ||||    
T  23597191 gagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacaca 23597097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 1031 - 928
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    ||||||||||||||||||||| | ||||||| ||||||| |||||||||  |||||| ||| |||||||||||||||||| | |||||||||||||| ||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactt 932  T
Q  267 tctc 270  Q
    ||||    
T  931 tctc 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 270
Target Start/End: Complemental strand, 1031 - 928
Alignment:
Q  167 atgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatt 266  Q
    ||||||||||||||||||||| | ||||||| ||||||| |||||||||  |||||| ||| |||||||||||||||||| | |||||||||||||| ||    
T  1031 atgagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactt 932  T
Q  267 tctc 270  Q
    ||||    
T  931 tctc 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 270
Target Start/End: Complemental strand, 10209 - 10108
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    |||| |||||||||||||||| ||||||| ||||||||||||| |||  |||| | |||||||||||||||||||||||||| || ||||||||| ||||    
T  10209 gagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttc 10110  T
Q  269 tc 270  Q
    ||    
T  10109 tc 10108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 4029 - 4130
Alignment:
Q  169 gagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttc 268  Q
    ||||||||||||||||||||| |||| || ||||||| | |||||||| |||||| |||||||||||||||| ||||||| |||||| ||||||| ||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  269 tc 270  Q
    ||    
T  4129 tc 4130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 8964 - 8862
Alignment:
Q  168 tgagtaatgatacatagacacccttaggtgacaatacatcctttaacactcacacataaatctgacacgtagtcacgtggaccccgcacaagcacaattt 267  Q
    ||||| |||||| ||||||| ||||| |||||||||||   ||| |||   ||||| |||| |||||| |||||||||||||||| |||||| ||| |||    
T  8964 tgagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacatttt 8865  T
Q  268 ctc 270  Q
    |||    
T  8864 ctc 8862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 17103 - 17155
Alignment:
Q  218 cacacataaatctgacacgtagtcacgtggaccccgcacaagcacaatttctc 270  Q
    |||||| |||||||||| || ||||| ||||||||||||||||||| ||||||    
T  17103 cacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctc 17155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University