View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7779_high_27 (Length: 249)
Name: NF7779_high_27
Description: NF7779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7779_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 28270559 - 28270327
Alignment:
| Q |
1 |
cgggtgggtcactactcaagttagtcatatgccaattaaaagaaagatagaaatcactacttgttatcccattttcgttactaaaaaatcttcaaatttt |
100 |
Q |
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| T |
28270559 |
cgggtgggtcactactcaagttagtcatatgccaattaaaagaaagatagaaatcactacttgttatcccattttcgttactaaaaaatcttcgaatttt |
28270460 |
T |
|
| Q |
101 |
tagaaaagcaatttcaaacgacgtaaattgttcgtaagtgtacttttaaacaaatagtggtgcacatctaaacaaaacagaatgcacttttagacaattt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
28270459 |
tagaaaagcaatttcaaacgacgtaaattgttcgtaagtgtacttttaaacaaatagtggtgcacatctaaacaaaacagaatgcactttcagacaattt |
28270360 |
T |
|
| Q |
201 |
tttgttcagcattccacaaaaaggagaactaat |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
28270359 |
tttgttcagcattccacaaaaaggagaactaat |
28270327 |
T |
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