View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7779_high_7 (Length: 509)

Name: NF7779_high_7
Description: NF7779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7779_high_7
NF7779_high_7
[»] chr5 (38 HSPs)
chr5 (318-500)||(36755839-36756021)
chr5 (112-317)||(18625377-18625580)
chr5 (111-317)||(35660565-35660769)
chr5 (111-319)||(37266646-37266852)
chr5 (120-317)||(32129573-32129768)
chr5 (111-318)||(13032034-13032238)
chr5 (113-314)||(11775709-11775909)
chr5 (118-317)||(39902337-39902534)
chr5 (111-300)||(4895708-4895895)
chr5 (112-319)||(14349720-14349924)
chr5 (120-319)||(40753116-40753313)
chr5 (22-112)||(36756013-36756103)
chr5 (121-245)||(4592726-4592849)
chr5 (120-301)||(8440943-8441122)
chr5 (120-317)||(34827118-34827311)
chr5 (120-223)||(1475686-1475789)
chr5 (401-500)||(36756226-36756325)
chr5 (26-87)||(36748700-36748761)
chr5 (401-500)||(36748891-36748999)
chr5 (118-244)||(3057338-3057464)
chr5 (147-239)||(28142807-28142901)
chr5 (146-312)||(32793324-32793487)
chr5 (118-245)||(3057180-3057307)
chr5 (118-237)||(10173870-10173985)
chr5 (22-83)||(36767170-36767231)
chr5 (446-500)||(36767357-36767411)
chr5 (146-315)||(43309068-43309225)
chr5 (189-241)||(3041338-3041390)
chr5 (204-317)||(29341003-29341113)
chr5 (146-232)||(14688524-14688610)
chr5 (118-171)||(4348120-4348173)
chr5 (121-241)||(36290537-36290647)
chr5 (119-181)||(23253716-23253778)
chr5 (189-234)||(2984427-2984472)
chr5 (321-374)||(36748608-36748661)
chr5 (321-374)||(36767050-36767103)
chr5 (118-175)||(38283711-38283768)
chr5 (204-241)||(40162737-40162774)
[»] chr8 (25 HSPs)
chr8 (113-319)||(28069636-28069840)
chr8 (120-317)||(30426625-30426820)
chr8 (120-317)||(36991280-36991475)
chr8 (120-317)||(40695204-40695398)
chr8 (113-318)||(10652572-10652776)
chr8 (120-294)||(41511186-41511358)
chr8 (120-245)||(24101940-24102065)
chr8 (124-314)||(44859128-44859314)
chr8 (121-317)||(10672470-10672662)
chr8 (125-244)||(28318929-28319048)
chr8 (112-317)||(45113186-45113390)
chr8 (120-222)||(12177613-12177715)
chr8 (120-222)||(12422041-12422143)
chr8 (121-236)||(8412179-8412294)
chr8 (118-239)||(27490038-27490159)
chr8 (256-318)||(5033310-5033372)
chr8 (113-181)||(5033023-5033091)
chr8 (147-237)||(36748525-36748611)
chr8 (130-318)||(37966399-37966583)
chr8 (193-238)||(26749581-26749626)
chr8 (193-241)||(1937185-1937233)
chr8 (121-241)||(34612498-34612609)
chr8 (146-180)||(21492733-21492767)
chr8 (204-241)||(17867690-17867727)
chr8 (115-175)||(21486584-21486644)
[»] chr2 (23 HSPs)
chr2 (111-314)||(13238596-13238797)
chr2 (113-317)||(28564808-28565011)
chr2 (120-317)||(35316749-35316944)
chr2 (146-319)||(23259441-23259612)
chr2 (114-222)||(39465693-39465801)
chr2 (113-210)||(41983401-41983497)
chr2 (118-201)||(2061299-2061382)
chr2 (254-317)||(45625035-45625098)
chr2 (118-210)||(374499-374591)
chr2 (134-222)||(45625111-45625199)
chr2 (254-317)||(11864925-11864988)
chr2 (124-178)||(42075456-42075510)
chr2 (120-217)||(10877626-10877724)
chr2 (118-221)||(12949392-12949494)
chr2 (112-236)||(8988782-8988895)
chr2 (152-238)||(30709065-30709152)
chr2 (112-241)||(374919-375038)
chr2 (121-241)||(29188588-29188698)
chr2 (183-245)||(21454520-21454582)
chr2 (204-241)||(13780506-13780543)
chr2 (121-237)||(23459880-23459986)
chr2 (204-241)||(40254180-40254217)
chr2 (259-311)||(40640731-40640783)
[»] chr1 (34 HSPs)
chr1 (114-321)||(50294015-50294220)
chr1 (113-319)||(48327108-48327312)
chr1 (113-317)||(50484303-50484505)
chr1 (113-317)||(12151684-12151886)
chr1 (120-245)||(12380936-12381061)
chr1 (120-245)||(12385003-12385128)
chr1 (113-313)||(40328193-40328390)
chr1 (121-317)||(23861908-23862106)
chr1 (120-222)||(45977946-45978048)
chr1 (124-218)||(7841763-7841857)
chr1 (139-245)||(24977183-24977289)
chr1 (254-318)||(12380832-12380896)
chr1 (254-318)||(12384899-12384963)
chr1 (121-317)||(18976260-18976452)
chr1 (118-239)||(46608409-46608525)
chr1 (118-219)||(2845187-2845289)
chr1 (118-234)||(5047418-5047533)
chr1 (211-317)||(7840635-7840739)
chr1 (118-192)||(1609617-1609691)
chr1 (146-239)||(32887812-32887905)
chr1 (257-317)||(45978064-45978124)
chr1 (152-303)||(39426166-39426315)
chr1 (111-180)||(680101-680170)
chr1 (121-234)||(23916013-23916124)
chr1 (146-244)||(44483718-44483815)
chr1 (193-241)||(52280069-52280117)
chr1 (147-234)||(7844939-7845026)
chr1 (124-202)||(40988643-40988721)
chr1 (204-241)||(6948862-6948899)
chr1 (118-228)||(19910469-19910583)
chr1 (143-243)||(24413310-24413400)
chr1 (111-180)||(30077725-30077794)
chr1 (154-211)||(45970804-45970861)
chr1 (146-210)||(42720819-42720882)
[»] chr7 (35 HSPs)
chr7 (111-317)||(9559010-9559213)
chr7 (116-319)||(4888387-4888588)
chr7 (124-317)||(21151080-21151271)
chr7 (120-318)||(16366442-16366638)
chr7 (120-318)||(18198180-18198376)
chr7 (122-316)||(45260384-45260576)
chr7 (125-317)||(7362497-7362686)
chr7 (120-314)||(47226035-47226224)
chr7 (120-318)||(12139252-12139447)
chr7 (120-319)||(44647889-44648085)
chr7 (120-245)||(25084754-25084879)
chr7 (112-319)||(33450422-33450628)
chr7 (121-318)||(47500237-47500433)
chr7 (118-245)||(29630970-29631097)
chr7 (121-293)||(34985925-34986095)
chr7 (118-239)||(32915881-32915999)
chr7 (171-244)||(39855840-39855913)
chr7 (143-227)||(40019628-40019712)
chr7 (148-228)||(30153225-30153305)
chr7 (254-314)||(47271107-47271166)
chr7 (152-245)||(46802357-46802448)
chr7 (193-238)||(47799933-47799978)
chr7 (112-239)||(19889066-19889183)
chr7 (193-237)||(30588532-30588576)
chr7 (121-239)||(32916104-32916212)
chr7 (125-238)||(47080360-47080470)
chr7 (189-235)||(11828945-11828991)
chr7 (204-242)||(19027713-19027751)
chr7 (204-242)||(20726885-20726923)
chr7 (204-241)||(4269187-4269224)
chr7 (139-180)||(6568419-6568460)
chr7 (204-241)||(14696788-14696825)
chr7 (204-241)||(30102501-30102538)
chr7 (120-180)||(6882149-6882209)
chr7 (120-180)||(25331767-25331827)
[»] chr6 (27 HSPs)
chr6 (120-318)||(4804372-4804568)
chr6 (113-316)||(1249105-1249304)
chr6 (113-314)||(27826455-27826654)
chr6 (120-317)||(7162008-7162203)
chr6 (120-319)||(21159323-21159516)
chr6 (136-318)||(17944102-17944282)
chr6 (146-317)||(12412587-12412756)
chr6 (120-245)||(29698087-29698212)
chr6 (171-317)||(13089705-13089849)
chr6 (120-222)||(32737798-32737900)
chr6 (121-314)||(227522-227714)
chr6 (146-234)||(30460770-30460858)
chr6 (254-317)||(32737913-32737976)
chr6 (152-319)||(2800565-2800730)
chr6 (147-192)||(17398773-17398818)
chr6 (146-222)||(1516238-1516314)
chr6 (146-222)||(1518327-1518403)
chr6 (193-241)||(24484876-24484924)
chr6 (260-317)||(1516163-1516219)
chr6 (260-317)||(1518252-1518308)
chr6 (189-234)||(2720366-2720411)
chr6 (204-309)||(7215816-7215919)
chr6 (260-317)||(1515498-1515554)
chr6 (204-241)||(7098226-7098263)
chr6 (146-239)||(17275921-17276014)
chr6 (255-303)||(28696626-28696673)
chr6 (189-241)||(32254061-32254113)
[»] chr4 (44 HSPs)
chr4 (113-317)||(19901874-19902076)
chr4 (113-317)||(24073534-24073735)
chr4 (120-318)||(56558203-56558399)
chr4 (121-316)||(34778346-34778539)
chr4 (120-318)||(5763117-5763313)
chr4 (120-317)||(33247086-33247279)
chr4 (113-317)||(23610559-23610761)
chr4 (132-317)||(3952126-3952309)
chr4 (120-317)||(18206996-18207191)
chr4 (121-317)||(5416422-5416617)
chr4 (118-318)||(38079675-38079873)
chr4 (120-239)||(12241440-12241559)
chr4 (124-317)||(33262508-33262699)
chr4 (120-317)||(39862441-39862636)
chr4 (120-222)||(12153095-12153197)
chr4 (163-303)||(30567868-30568006)
chr4 (175-317)||(12312431-12312572)
chr4 (120-245)||(47922101-47922226)
chr4 (120-208)||(52018707-52018795)
chr4 (112-312)||(47922327-47922526)
chr4 (121-245)||(31862246-31862370)
chr4 (120-214)||(17080697-17080791)
chr4 (254-317)||(12153210-12153273)
chr4 (124-202)||(12312572-12312650)
chr4 (257-317)||(33524321-33524381)
chr4 (118-245)||(25442200-25442328)
chr4 (257-317)||(52018822-52018882)
chr4 (121-241)||(56269106-56269217)
chr4 (155-310)||(1871237-1871388)
chr4 (111-241)||(5524372-5524492)
chr4 (147-319)||(23474062-23474231)
chr4 (146-221)||(33841854-33841929)
chr4 (121-241)||(37002281-37002391)
chr4 (193-241)||(48084555-48084603)
chr4 (155-213)||(43447638-43447697)
chr4 (118-238)||(3326438-3326559)
chr4 (204-241)||(25219003-25219040)
chr4 (204-241)||(32146510-32146547)
chr4 (204-241)||(46238974-46239011)
chr4 (204-241)||(53526096-53526133)
chr4 (204-241)||(55160401-55160438)
chr4 (199-235)||(36688224-36688260)
chr4 (193-237)||(42010114-42010158)
chr4 (205-241)||(56453850-56453886)
[»] scaffold0012 (1 HSPs)
scaffold0012 (120-318)||(207987-208183)
[»] chr3 (26 HSPs)
chr3 (120-317)||(43719903-43720098)
chr3 (113-317)||(19830387-19830591)
chr3 (111-317)||(2229898-2230102)
chr3 (136-317)||(27033591-27033770)
chr3 (120-317)||(34373755-34373950)
chr3 (120-315)||(40851697-40851891)
chr3 (125-299)||(34373559-34373731)
chr3 (125-314)||(46167322-46167509)
chr3 (121-317)||(48084744-48084939)
chr3 (118-245)||(550842-550969)
chr3 (212-317)||(24754673-24754776)
chr3 (212-317)||(24763670-24763773)
chr3 (124-245)||(12402893-12403015)
chr3 (123-301)||(566746-566925)
chr3 (121-245)||(40810382-40810505)
chr3 (118-218)||(52859433-52859534)
chr3 (112-241)||(31523698-31523817)
chr3 (121-241)||(42613015-42613125)
chr3 (118-217)||(2310233-2310330)
chr3 (265-317)||(24647905-24647957)
chr3 (118-180)||(3009171-3009233)
chr3 (118-173)||(566988-567043)
chr3 (146-193)||(32577482-32577528)
chr3 (119-181)||(20485808-20485870)
chr3 (118-180)||(49289042-49289104)
chr3 (112-237)||(49679304-49679419)
[»] scaffold0008 (1 HSPs)
scaffold0008 (115-317)||(9157-9354)
[»] scaffold0035 (1 HSPs)
scaffold0035 (120-319)||(16351-16548)
[»] scaffold0250 (1 HSPs)
scaffold0250 (120-317)||(7071-7270)
[»] scaffold0006 (2 HSPs)
scaffold0006 (124-222)||(73889-73987)
scaffold0006 (256-313)||(73817-73874)
[»] scaffold0456 (2 HSPs)
scaffold0456 (146-222)||(13646-13722)
scaffold0456 (255-317)||(13737-13799)
[»] scaffold0126 (1 HSPs)
scaffold0126 (118-245)||(22468-22595)
[»] scaffold0009 (1 HSPs)
scaffold0009 (147-245)||(6461-6559)
[»] scaffold0171 (1 HSPs)
scaffold0171 (111-238)||(17339-17456)
[»] scaffold0664 (1 HSPs)
scaffold0664 (204-241)||(4731-4768)
[»] scaffold0468 (1 HSPs)
scaffold0468 (146-218)||(5560-5632)


Alignment Details
Target: chr5 (Bit Score: 159; Significance: 2e-84; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 318 - 500
Target Start/End: Complemental strand, 36756021 - 36755839
Alignment:
Q  318 caccatcaccgctaccaccgatctcagtagagtatgatgtccacatatcatccatgcacaaaagatacagttgatgcacctgaaacccagtgattatctt 417  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  36756021 caccatcaccgctaccaccgatctcagtaaaatatgatgtccacatatcatcgatgcacaaaaggtacagttgatgcacctgaaacccagtgattatctt 36755922  T
Q  418 cttcgatcagtaatttgacattattctaggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 500  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36755921 cttcgatcagtaatttgacattactcttggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 36755839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 112 - 317
Target Start/End: Complemental strand, 18625580 - 18625377
Alignment:
Q  112 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 211  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  18625580 cgggtgaagatcctctccatttatgtgtttttcaatttctttcatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatg 18625481  T
Q  212 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 311  Q
    ||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18625480 gtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatct 18625383  T
Q  312 tcaccc 317  Q
    ||||||    
T  18625382 tcaccc 18625377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 111 - 317
Target Start/End: Complemental strand, 35660769 - 35660565
Alignment:
Q  111 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    |||||| ||||||||||| |||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  35660769 acgggttaagatcctctctatttatgtgtttctccgtttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgat 35660670  T
Q  211 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 310  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  35660669 ggtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 35660572  T
Q  311 ttcaccc 317  Q
    |||||||    
T  35660571 ttcaccc 35660565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 111 - 319
Target Start/End: Original strand, 37266646 - 37266852
Alignment:
Q  111 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    |||||| | ||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  37266646 acgggttaggatcctctccatttacgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaactaaaatataattaatgat 37266745  T
Q  211 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 310  Q
    ||||||||||||||||||||| |||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  37266746 ggtgggacccacttagtggtatgacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 37266843  T
Q  311 ttcacccca 319  Q
    |||||||||    
T  37266844 ttcacccca 37266852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 120 - 317
Target Start/End: Complemental strand, 32129768 - 32129573
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  32129768 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 32129669  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  32129668 cacttagtggtaggacccaccatcta--tttttggtgtctatctctctccaacttataaaactccatttattttgccaaatggagaggatcttcaccc 32129573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 111 - 318
Target Start/End: Original strand, 13032034 - 13032238
Alignment:
Q  111 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    |||||| | |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || |||||||||||||| |||||||    
T  13032034 acgggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatctt-aaaaaaataaaatataattaatgat 13032132  T
Q  211 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 310  Q
    ||||||||||| ||||||||||||| |||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  13032133 ggtgggacccatttagtggtaggactcaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 13032230  T
Q  311 ttcacccc 318  Q
    ||||||||    
T  13032231 ttcacccc 13032238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 113 - 314
Target Start/End: Original strand, 11775709 - 11775909
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatg 211  Q
    |||| |||||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||| |    
T  11775709 gggttaagatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaaagtaaaatataattaatgacg 11775808  T
Q  212 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 311  Q
    ||||||||||||||||||||||| ||||||||||        |||||||||||||||||||||| ||| ||||||||||||| ||||||||| |||||||    
T  11775809 gtgggacccacttagtggtaggatccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatct 11775906  T
Q  312 tca 314  Q
    |||    
T  11775907 tca 11775909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 118 - 317
Target Start/End: Original strand, 39902337 - 39902534
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||||||| |    
T  39902337 aagatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaa 39902436  T
Q  218 cccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
     ||| |||||||||||||||||||||||        |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||| ||||||||    
T  39902437 tccatttagtggtaggacccaccatcta--tttcttgtgtttatctctctccaacttgtaaaactccatttattttgtcaaatggagaggaacttcaccc 39902534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 111 - 300
Target Start/End: Complemental strand, 4895895 - 4895708
Alignment:
Q  111 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    |||||| | |||||||| ||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  4895895 acgggttaggatcctcttcatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgat 4895796  T
Q  211 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaat 300  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  4895795 ggtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 4895708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 112 - 319
Target Start/End: Original strand, 14349720 - 14349924
Alignment:
Q  112 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 211  Q
    ||||| |||||| ||||||||||||||||| || |||||||  ||||||| ||||||||||||||||| ||||||| ||| |||||||||| ||||||||    
T  14349720 cgggttaagatcttctccatttatgtgtttctccatttctttaatttggaaagataaagacacataaa-tcttgaaaaaagtaaaatataattaatgatg 14349818  T
Q  212 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 311  Q
    ||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||  ||| ||||||||||||| |||||| || |||||||    
T  14349819 gtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctgtctctctccaacttacaaaactccatttattttaccaaatagagaggatct 14349916  T
Q  312 tcacccca 319  Q
    ||||||||    
T  14349917 tcacccca 14349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 40753313 - 40753116
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    ||||||||||||||||||| || || |||||||  |||||||||||||||  |||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  40753313 gatcctctccatttatgtgcttctccatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 40753214  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 319  Q
    ||||||||||||||||||||||| ||        |||||||||| ||||||||||| ||| ||  |||||||||||||||| || |||||||||||||||    
T  40753213 cacttagtggtaggacccaccatata--ttttttgtgtctatctttctccaacttgcaaaactttatttattttgccaaatagagaggatcttcacccca 40753116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 36756103 - 36756013
Alignment:
Q  22 caggctggtttggagtgccgtttcaaatcccaattccttaactttttcatgattcttctccatacccagattaatggggcatcaccatcac 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36756103 caggctggtttggagtgccgtttcaaatcccaattccttaactttttcatgattcttctccatacccagattaatggggcatcaccatcac 36756013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 121 - 245
Target Start/End: Original strand, 4592726 - 4592849
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||  ||||||||||| ||||| ||| |||||||||| |||||||||||||||||    
T  4592726 atcctctccatttatgtgtttctccatttcttcaatttggagagataat-acacataaaatattgaaaaaagtaaaatataattaatgatggtgggaccc 4592824  T
Q  221 acttagtggtaggacccaccatcta 245  Q
    ||||||||||| |||||||||||||    
T  4592825 acttagtggtaagacccaccatcta 4592849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 120 - 301
Target Start/End: Complemental strand, 8441122 - 8440943
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||| ||||||||||||||||| ||  |||| || ||||||||||||||| ||||||| |||||| || ||| |||||||||| |||||||||||||||     
T  8441122 gatcatctccatttatgtgtttctccgtttcatcaatttggagagataaatacacatacaatcttaaaaaaagtaaaatataattaatgatggtgggaca 8441023  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatg 301  Q
    |||||||||||| | | |||||||||        ||||||||||  |||||||||| ||| |||||||||||||||||||||    
T  8441022 cacttagtggtatgtcgcaccatcta--tttttggtgtctatctacctccaacttgcaaaactccatttattttgccaaatg 8440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 120 - 317
Target Start/End: Original strand, 34827118 - 34827311
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggac 218  Q
    ||||||| |||||||| ||||| || |||||||  ||||| |||||||||||||||  |||| ||||| |||| |||||||||| ||| |||||||||||    
T  34827118 gatcctcaccatttatatgttt-tccatttcttaaatttgaagagataaagacaca--aaattttgaaaaaaagtaaaatataattaaagatggtgggac 34827214  T
Q  219 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    |||||||||||||||| ||||||||||         ||||||||||||||||||||| | | ||||||||||||||| ||||||| | |||||||||||    
T  34827215 ccacttagtggtaggatccaccatctattttttt--tgtctatctctctccaacttgcataactccatttattttgctaaatggagatgatcttcaccc 34827311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 120 - 223
Target Start/End: Complemental strand, 1475789 - 1475686
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||| ||||||||||||| |  |||||||| |||||||| |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  1475789 gatcctcttcatttatgtgttttttcatttcttcaatttggagtgataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 1475690  T
Q  220 cact 223  Q
    ||||    
T  1475689 cact 1475686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 401 - 500
Target Start/End: Complemental strand, 36756325 - 36756226
Alignment:
Q  401 aacccagtgattatcttcttcgatcagtaatttgacattattctaggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 500  Q
    ||||| ||||||||||| || ||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  36756325 aacccggtgattatcttatttgatcagtaatttgacattactcttgcaattttctacgcttaattcgttcaaagttttctttaatttatcccattcatct 36756226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 36748761 - 36748700
Alignment:
Q  26 ctggtttggagtgccgtttcaaatcccaattccttaactttttcatgattcttctccatacc 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36748761 ctggtttggagtgccgtttcaaatcccaattccttaactttttcatgatacttctccatacc 36748700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 401 - 500
Target Start/End: Complemental strand, 36748999 - 36748891
Alignment:
Q  401 aacccagtgattatcttcttcgatcagtaatttgacattattctaggaattttc---------tacgcttaattcgtccaaagttttctttaatttatcc 491  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||| ||||         |||| ||||||||||||||||||||||||||||||||    
T  36748999 aacccagtgattatcttctttgatctgtaatttgacattactcttggaactttctacgtttaatacgtttaattcgtccaaagttttctttaatttatcc 36748900  T
Q  492 cgttcatct 500  Q
    | |||||||    
T  36748899 cattcatct 36748891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 244
Target Start/End: Original strand, 3057338 - 3057464
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    |||||| ||||||||||||| | | ||| |||||||||||| |||||||||||||||| ||||  ||||| ||| || || |||| |||||||| ||| |    
T  3057338 aagatcatctccatttatgtttctctcactttcttccattttgagagataaagacacaaaaaagtttgaaaaaagtataaaataattaatgatgatggaa 3057437  T
Q  218 cccacttagtggtaggacccaccatct 244  Q
    | ||||| ||||||||| ||| |||||    
T  3057438 ctcactttgtggtaggatccatcatct 3057464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 239
Target Start/End: Complemental strand, 28142901 - 28142807
Alignment:
Q  147 tttcttccatttggagagataaagacacataaaa-tcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggacccac 239  Q
    ||||||||||||||| ||  |||||||||||||| ||||||| |||| |||||||||| ||||||||||||||| |||||| |||||||| ||||    
T  28142901 tttcttccatttggaaaggcaaagacacataaaaatcttgaaaaaaagtaaaatataattaatgatggtgggactcacttaatggtaggatccac 28142807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 146 - 312
Target Start/End: Original strand, 32793324 - 32793487
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 245  Q
    ||||||| |||||| ||||||||||||  ||||||||||||| ||| |||||||||| | ||||| |||||||| ||||||| ||| ||  || ||||||    
T  32793324 atttctttcatttgaagagataaagacgaataaaatcttgaaaaaagtaaaatataattgatgattgtgggacctacttagtagtaagaatcatcatcta 32793423  T
Q  246 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 312  Q
            |||| |||||||||| || ||||||| ||||||||||||||| |||| || ||||||||    
T  32793424 --ttttttgtgtatatctctctctaaattgtaaa-ctccatttattttgctaaatagataggatctt 32793487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 3057307 - 3057180
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    |||||| |||||| |||||| | | || |||||||| ||||| |||||||||||||| |||| | || || ||| |||||||||| |||||||  || ||    
T  3057307 aagatcttctccaattatgtctctctccatttcttctatttgaagagataaagacacttaaattttttaaaaaagtaaaatataattaatgattatgtga 3057208  T
Q  218 cccacttagtggtaggacccaccatcta 245  Q
    | |||||| |||||||| ||||||||||    
T  3057207 ctcacttaatggtaggatccaccatcta 3057180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 10173870 - 10173985
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    ||||||||||||||||||||  || || ||||| | |||||||||||||||||||||    ||| ||||| ||| ||||| |||| |||||||||| | |    
T  10173870 aagatcctctccatttatgtccttctccatttccttcatttggagagataaagacac----aattttgaaaaaagtaaaaaataattaatgatggtagaa 10173965  T
Q  218 cccacttagtggtaggaccc 237  Q
    |||| |||||| ||||||||    
T  10173966 cccatttagtgataggaccc 10173985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 36767231 - 36767170
Alignment:
Q  22 caggctggtttggagtgccgtttcaaatcccaattccttaactttttcatgattcttctcca 83  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||||||||||| ||| ||||    
T  36767231 caggctggtttggagtgccttttcaaatcccaactcctttactttttcatgatacttttcca 36767170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 446 - 500
Target Start/End: Complemental strand, 36767411 - 36767357
Alignment:
Q  446 ggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 500  Q
    |||| |||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  36767411 ggaactttccacgcttaattcgtccaaagatttctttaaattatcccgttcatct 36767357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 146 - 315
Target Start/End: Original strand, 43309068 - 43309225
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 245  Q
    |||||||| ||||| ||||||||||||||||||||||||||| |||||          |||||||||||| ||||| ||| ||||| || |||| |||||    
T  43309068 atttcttcaatttgaagagataaagacacataaaatcttgaaaaaaat----------taatgatggtggaacccatttaatggtaagatccactatcta 43309157  T
Q  246 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcac 315  Q
             ||||||||||||||||||||| ||| |||||||||||||  |||||  | |||||||||||    
T  43309158 tttttta--tgtctatctctctccaacttgcaaaactccatttattttatcaaataaagaggatcttcac 43309225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 3041390 - 3041338
Alignment:
Q  189 aaaataaaatataactaatgatggtgggacccacttagtggtaggacccacca 241  Q
    ||||||||| |||| ||||||||||||||||| ||||||| ||||||||||||    
T  3041390 aaaataaaaaataattaatgatggtgggacccgcttagtgataggacccacca 3041338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 29341003 - 29341113
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatgga 303  Q
    |||||||||||||||||||||| | ||||||||||| |||||        |||||||||||||||||| ||| | | ||||||||||| | |||||||||    
T  29341003 taatgatggtgggacccacttaatagtaggacccactatcta--ttttctgtgtctatctctctccaaattgcata-ctccatttattataccaaatgga 29341099  T
Q  304 caggatcttcaccc 317  Q
     |||||||| ||||    
T  29341100 gaggatctttaccc 29341113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 14688524 - 14688610
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtag 232  Q
    |||||||||||||||||||||||||||| | ||||  || || ||| | ||| ||| ||||||||||||| | ||||||| ||||||    
T  14688524 atttcttccatttggagagataaagacatacaaaaatttaaaaaaagtcaaaaatatctaatgatggtggaatccacttaatggtag 14688610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 4348173 - 4348120
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaaga 171  Q
    ||||||||||| |||||||| ||| ||||||| || ||||||||||||||||||    
T  4348173 aagatcctctctatttatgtctttctcaatttgttacatttggagagataaaga 4348120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 36290537 - 36290647
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||||||||||   ||| |  |||| |||||||| |||||||||||||||||||||          | ||||| |||| |||||||||||||| ||    
T  36290537 atcctctccatttataaattttttcatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggatcc 36290626  T
Q  221 acttagtggtaggacccacca 241  Q
    |||||||| ||||||||||||    
T  36290627 acttagtgataggacccacca 36290647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 181
Target Start/End: Original strand, 23253716 - 23253778
Alignment:
Q  119 agatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaat 181  Q
    ||||||| ||||||||  | ||| || |||||| ||||||||||||||| |||||||||||||    
T  23253716 agatcctatccatttaaatttttctccatttctaccatttggagagatagagacacataaaat 23253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 2984472 - 2984427
Alignment:
Q  189 aaaataaaatataactaatgatggtgggacccacttagtggtagga 234  Q
    ||||||||| |||| |||||||||||||||||| |||||| |||||    
T  2984472 aaaataaaaaataattaatgatggtgggacccatttagtgatagga 2984427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 36748661 - 36748608
Alignment:
Q  321 catcaccgctaccaccgatctcagtagagtatgatgtccacatatcatccatgc 374  Q
    ||||||| || |||| |||||||||| |  ||||||||||||||||||||||||    
T  36748661 catcacctctcccactgatctcagtaaaaaatgatgtccacatatcatccatgc 36748608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 36767103 - 36767050
Alignment:
Q  321 catcaccgctaccaccgatctcagtagagtatgatgtccacatatcatccatgc 374  Q
    ||||||| || |||| |||||||||| |  ||||||||||||||||||||||||    
T  36767103 catcaccactgccactgatctcagtaaaaaatgatgtccacatatcatccatgc 36767050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 38283711 - 38283768
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacaca 175  Q
    |||||||||||||||||  | |||||| |||||| |||||| |||||||| |||||||    
T  38283711 aagatcctctccatttaaatttttatctatttctaccatttagagagatatagacaca 38283768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 40162737 - 40162774
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  40162737 taatgatggtgggatccacttagtgataggacccacca 40162774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 2e-81; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 113 - 319
Target Start/End: Original strand, 28069636 - 28069840
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 212  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  28069636 gggtgaagatcctctccatttatgtgtttttcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatgg 28069735  T
Q  213 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 312  Q
    |||||||||||||||||||||||||||||||||        |||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  28069736 tgggacccacttagtggtaggacccaccatcta--ttttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatctt 28069833  T
Q  313 cacccca 319  Q
    |||||||    
T  28069834 cacccca 28069840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 120 - 317
Target Start/End: Complemental strand, 30426820 - 30426625
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  30426820 gatcctctccatttatgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 30426721  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||| ||| | ||||||||||||||||||||| ||| |||||||||    
T  30426720 cacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagagggtcttcaccc 30426625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 120 - 317
Target Start/End: Original strand, 36991280 - 36991475
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||| ||||||||||||| || |||||||| |||||||||||||||||||| |||||||||||| ||| | |||||||| ||||||||||||||||    
T  36991280 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacgtaaaatcttgaaaaaagtcaaatataattaatgatggtgggacc 36991379  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||||||| ||||||         ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  36991380 cacttagtggtaggacccatcatctatttctta--tgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 36991475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 120 - 317
Target Start/End: Complemental strand, 40695398 - 40695204
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    ||||||| | |||||||| |||||| |||||||| |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||     
T  40695398 gatcctccctatttatgtatttatccatttcttcaatttggagggataaagaaacataaaatcttgaaaaaagtaaaatataactaatgatggtggaact 40695299  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||||| ||||||||        |||||||||||||||||||||  ||| ||||||||||||||| ||||||| | |||||||||||    
T  40695298 cacttagtggtaggacctaccatcta--ttttttgtgtctatctctctccaacttccaaa-ctccatttattttgctaaatggagaagatcttcaccc 40695204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 113 - 318
Target Start/End: Complemental strand, 10652776 - 10652572
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa--taaaatataactaatgat 210  Q
    |||| |||||||||||||||||||||||| |  |||||||| ||||||||||||||| ||||||||||| ||||| ||||   ||||||||| |||||||    
T  10652776 gggttaagatcctctccatttatgtgtttcttcatttcttcaatttggagagataaa-acacataaaattttgaaaaaaagtaaaaatataattaatgat 10652678  T
Q  211 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 310  Q
    ||||||||||| ||||| ||| ||||||||||| |        || ||||||||||||||||||| ||| | ||||||||||| ||||||||| ||||||    
T  10652677 ggtgggacccaattagtagtatgacccaccatcaa--ttttttgtatctatctctctccaacttgcaaaacaccatttattttaccaaatggagaggatc 10652580  T
Q  311 ttcacccc 318  Q
    ||||||||    
T  10652579 ttcacccc 10652572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 120 - 294
Target Start/End: Original strand, 41511186 - 41511358
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||||||||| | |    
T  41511186 gatcctctccatttatgtgtttttccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaaac 41511285  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttg 294  Q
    ||||||||| |||||||||| |||||         | ||||||||| ||||||||| ||| ||||||||||||||    
T  41511286 cacttagtgataggacccactatctatttttta--tatctatctctttccaacttgcaaaactccatttattttg 41511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 24101940 - 24102065
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||| ||  |||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||| ||     
T  24101940 gatcctctccatttatgtgtttttctatttttttaatttggagagataaagacacgtaaaatcttgaaaaaaatgaaatataattaatgatggtggaact 24102039  T
Q  220 cacttagtggtaggacccaccatcta 245  Q
    ||||||||||||||| ||||||||||    
T  24102040 cacttagtggtaggatccaccatcta 24102065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 124 - 314
Target Start/End: Complemental strand, 44859314 - 44859128
Alignment:
Q  124 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 223  Q
    ||||||||||| |||||| ||  ||||||  |||||||||||||||||||| | |||| ||  | |||||||||||||| ||||||||||||||||||||    
T  44859314 ctctccatttacgtgtttttccttttctttaatttggagagataaagacacgtgaaattttttaaaaaataaaatataattaatgatggtgggacccact 44859215  T
Q  224 tagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 314  Q
    ||||||||| ||||||||||||          ||||||||||||| |||||| ||| |||||||||||||| ||||| || ||||||||||    
T  44859214 tagtggtagaacccaccatctattttta----gtctatctctctctaacttgcaaaactccatttattttgtcaaatagagaggatcttca 44859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 121 - 317
Target Start/End: Complemental strand, 10672662 - 10672470
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    ||||||| ||||||||||||| |  |||| ||| ||||||||||||||| | ||||||||| || || |   |||||||||| ||||||||||||||| |    
T  10672662 atcctcttcatttatgtgtttcttcatttattcaatttggagagataaaaatacataaaattttaaaaagggtaaaatataattaatgatggtgggactc 10672563  T
Q  221 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    |||||||||||||| ||||||||||        |||||||  ||||||||||||| ||| ||||||||||||||||||||||| || ||||||||||    
T  10672562 acttagtggtaggatccaccatcta--ttttttgtgtcta--tctctccaacttgcaaaactccatttattttgccaaatggagagaatcttcaccc 10672470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 125 - 244
Target Start/End: Complemental strand, 28319048 - 28318929
Alignment:
Q  125 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 224  Q
    |||||||||| |||||| || |||||||| ||||||||||| ||||||||||||||| || || ||| |||||||||| |||||||||| ||||||||||    
T  28319048 tctccatttacgtgtttctccatttcttcaatttggagagacaaagacacataaaattttaaaaaaagtaaaatataattaatgatggttggacccactt 28318949  T
Q  225 agtggtaggacccaccatct 244  Q
    ||||||||||||||| ||||    
T  28318948 agtggtaggacccactatct 28318929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 112 - 317
Target Start/End: Original strand, 45113186 - 45113390
Alignment:
Q  112 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 211  Q
    ||||| || ||||||||||||||| |  || |  |||| | ||||||||||||||| ||||||||||||| ||||| ||||||||| |||| ||||||||    
T  45113186 cgggtcaaaatcctctccatttatatccttcttcatttttaccatttggagagatatagacacataaaattttgaaaaaaataaaaaataattaatgatg 45113285  T
Q  212 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 311  Q
     |||||| ||||||||||| ||||||||||||||        |||||||| ||||||||| ||| ||| | | |||||||||  |||||||| |||||||    
T  45113286 atgggacacacttagtggttggacccaccatcta-ttcttttgtgtctatgtctctccaaattgcaaaacacaatttattttagcaaatggagaggatct 45113384  T
Q  312 tcaccc 317  Q
    | ||||    
T  45113385 taaccc 45113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 120 - 222
Target Start/End: Complemental strand, 12177715 - 12177613
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    ||||||||| |||||||||||| || |||||||| ||||  |||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||| |    
T  12177715 gatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatggtgggatc 12177616  T
Q  220 cac 222  Q
    |||    
T  12177615 cac 12177613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 120 - 222
Target Start/End: Complemental strand, 12422143 - 12422041
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    ||||||||| |||||||||||| || |||||||| ||||  |||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||| |    
T  12422143 gatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatggtgggatc 12422044  T
Q  220 cac 222  Q
    |||    
T  12422043 cac 12422041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 8412179 - 8412294
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    ||||||||||||||||| ||| |  |||| |||||||| |||||||||| ||||||||||| ||||| ||| |||||||||| ||| ||||||| || |     
T  8412179 atcctctccatttatgtttttcttcattttttccatttagagagataaatacacataaaatattgaaaaaagtaaaatataattaacgatggtgagatct 8412278  T
Q  221 acttagtggtaggacc 236  Q
    ||||||||||||||||    
T  8412279 acttagtggtaggacc 8412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 27490159 - 27490038
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    |||||| ||||||||||||| ||| ||||||||||||||||| ||||| ||| | ||||||||||||||| ||| |||||||||| |||||||  |  ||    
T  27490159 aagatcttctccatttatgtctttctcaatttcttccatttgaagagacaaaaatacataaaatcttgaaaaaagtaaaatataattaatgatatttaga 27490060  T
Q  218 cccacttagtggtaggacccac 239  Q
    | ||||||||| ||||| ||||    
T  27490059 ctcacttagtgataggatccac 27490038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 5033310 - 5033372
Alignment:
Q  256 gtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  5033310 gtctatctctctccaacttgcaaaactccatttattttgccaaatggaaaggatcttcacccc 5033372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 5033023 - 5033091
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaat 181  Q
    |||| |||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||    
T  5033023 gggttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 5033091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 36748611 - 36748525
Alignment:
Q  147 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggaccc 237  Q
    ||||||||||||||||||||||||||||| | || |||||  ||||||||  |||| |||||||||||||| ||||||| |||||||||||    
T  36748611 tttcttccatttggagagataaagacacagagaagcttga--aaaataaa--ataattaatgatggtgggatccacttaatggtaggaccc 36748525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 318
Target Start/End: Complemental strand, 37966583 - 37966399
Alignment:
Q  130 atttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtgg 229  Q
    |||||||| ||| || |||||||  ||||||||||||||||| ||||||||  || || ||| |||||||||| ||||| |  ||||  | | |||||||    
T  37966583 atttatgtctttctccatttcttttatttggagagataaagatacataaaaatttaaaaaaagtaaaatataattaatggtattgggttcaa-ttagtgg 37966485  T
Q  230 taggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    ||||||| || |||||        |||| ||||||||| ||| ||| |||| |||||||||||||||||||||| |||||||| |||||    
T  37966484 taggacctacaatctatttttt--gtgtttatctctcttcaaattgcaaat-tccatttattttgccaaatggagaggatcttaacccc 37966399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 26749626 - 26749581
Alignment:
Q  193 taaaatataactaatgatggtgggacccacttagtggtaggaccca 238  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  26749626 taaaaaataattaatgatggtgggacccacttagtgataggaccca 26749581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 1937233 - 1937185
Alignment:
Q  193 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 241  Q
    ||||| |||| ||||||||||||||||| ||||||| ||||||||||||    
T  1937233 taaaaaataattaatgatggtgggacccgcttagtgataggacccacca 1937185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 34612498 - 34612609
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||||||||||   ||| || |||| |||||||| ||||||||||||||||||||         ||   |||| |||| ||||||||||| |||||    
T  34612498 atcctctccatttataaatttttccatttgttccatttagagagataaagacacataaa---------aagtaaaaaaataattaatgatggtgagaccc 34612588  T
Q  221 acttagtggtaggacccacca 241  Q
    |||||||| ||||||||||||    
T  34612589 acttagtgataggacccacca 34612609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 21492733 - 21492767
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaa 180  Q
    |||||||||||||||||||||||||||||| ||||    
T  21492733 atttcttccatttggagagataaagacacacaaaa 21492767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 17867727 - 17867690
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  17867727 taatgatggtgggatccacttagtgataggacccacca 17867690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 21486584 - 21486644
Alignment:
Q  115 gtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacaca 175  Q
    ||||||||| ||| ||||||||| | | || |||||||||||||| |||||| ||||||||    
T  21486584 gtgaagatcatcttcatttatgtttctttccatttcttccatttgaagagatgaagacaca 21486644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 7e-75; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 111 - 314
Target Start/End: Original strand, 13238596 - 13238797
Alignment:
Q  111 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  13238596 acgggtgaagatcctctccatttatgcgtttctcaatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgat 13238695  T
Q  211 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 310  Q
    |||||||||||||| ||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  13238696 ggtgggacccacttggtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatc 13238793  T
Q  311 ttca 314  Q
    ||||    
T  13238794 ttca 13238797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 113 - 317
Target Start/End: Original strand, 28564808 - 28565011
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatc-ttgaacaaaataaaatataactaatgatg 211  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||| || || ||| |||||||||| ||||||||    
T  28564808 gggtgaagatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttttaaaaaagtaaaatataattaatgatg 28564907  T
Q  212 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 311  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||| ||||||  ||| ||||||||||||||||||||||| |||||||    
T  28564908 gtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctacaacttaaaaaactccatttattttgccaaatggagaggatct 28565005  T
Q  312 tcaccc 317  Q
    ||||||    
T  28565006 tcaccc 28565011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 120 - 317
Target Start/End: Original strand, 35316749 - 35316944
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    ||||||||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||    
T  35316749 gatcctctccatttacgtgtttctccatttcttcaatttggagagataaagacatataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 35316848  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||| ||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  35316849 cacttagtggtaggatccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 35316944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 146 - 319
Target Start/End: Complemental strand, 23259612 - 23259441
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 245  Q
    |||||||| |||| ||| |||||||||| |||||||||| || ||| |||||||||| |||||||||||||| ||||||||| ||||||||||||| |||    
T  23259612 atttcttcaattttgagggataaagacatataaaatcttaaaaaaagtaaaatataattaatgatggtgggatccacttagtagtaggacccaccagcta 23259513  T
Q  246 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 319  Q
            |||||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||    
T  23259512 --ttttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagaggatcttcacccca 23259441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 39465693 - 39465801
Alignment:
Q  114 ggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggt 213  Q
    ||||| |||||||||||||||||||||| || |||| ||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||    
T  39465693 ggtgatgatcctctccatttatgtgtttctccattttttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggt 39465792  T
Q  214 gggacccac 222  Q
    |||||||||    
T  39465793 gggacccac 39465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 41983497 - 41983401
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    |||| |||||||||||||||||||||||| || |||||||  |||||||||||||||||||||| |||||||||| ||| |||||||||| |||||||    
T  41983497 gggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacat-aaatcttgaaaaaagtaaaatataattaatgat 41983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 118 - 201
Target Start/End: Original strand, 2061299 - 2061382
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatata 201  Q
    ||||||||||||||||||  || | |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  2061299 aagatcctctccatttattagtatctcaatttcttccatttggagagataaagacgcataaaatcttgaaaaaagtaaaatata 2061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 45625098 - 45625035
Alignment:
Q  254 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  45625098 gtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcaccc 45625035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 118 - 210
Target Start/End: Complemental strand, 374591 - 374499
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    ||||| |||||||||||||||||| ||  |||||| ||||| |||||||||| ||||||||||||||||| ||| |||||||||| |||||||    
T  374591 aagattctctccatttatgtgtttctccctttctttcatttagagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgat 374499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 45625199 - 45625111
Alignment:
Q  134 atgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 222  Q
    |||||||| || |||||||| |||| ||||||||||||||| |||||||||||| || |||||||| || |||||||||||||||||||    
T  45625199 atgtgtttctccatttcttcaatttagagagataaagacacgtaaaatcttgaaaaatataaaataaaattaatgatggtgggacccac 45625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 11864925 - 11864988
Alignment:
Q  254 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||||    
T  11864925 gtgtctatctctctccaacttgtaaaactccatttattttgataaatggagaggatcttcaccc 11864988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 42075510 - 42075456
Alignment:
Q  124 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataa 178  Q
    ||||||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  42075510 ctctccatttattagtttatccatttcttccatttggagagataaagacacataa 42075456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 10877626 - 10877724
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatct--tgaacaaaataaaatataactaatgatggtggga 217  Q
    |||||||| ||||||||||||| || |||||||| ||||||||||||||| ||||||||||| |    || ||||| |||||||| ||||||||||||||    
T  10877626 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaa-acacataaaatttaaaaaaaaaaatgaaatataattaatgatggtggga 10877724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 221
Target Start/End: Original strand, 12949392 - 12949494
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    |||||| ||||||| ||||| ||| ||  ||||| | ||||||||||||||||| ||||||||||||||| ||| ||||| |||| |||||| || ||||    
T  12949392 aagatcttctccatctatgtctttctccgtttctcctatttggagagataaagatacataaaatcttgaaaaaagtaaaa-ataattaatgacggcggga 12949490  T
Q  218 ccca 221  Q
    ||||    
T  12949491 ccca 12949494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 8988782 - 8988895
Alignment:
Q  112 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 211  Q
    ||||| || |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||           |||||| |||| ||||||||    
T  8988782 cgggtcaatatcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa-----------ataaaaaataattaatgatg 8988870  T
Q  212 gtgggacccacttagtggtaggacc 236  Q
    ||||||||||||||||| |||||||    
T  8988871 gtgggacccacttagtgataggacc 8988895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 30709065 - 30709152
Alignment:
Q  152 tccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggaccca 238  Q
    |||||||||| ||||| |||| || ||||  ||||| |||| ||||| | || |||||||||||||| ||||||||||||||||||||    
T  30709065 tccatttggaaagatatagactcaaaaaaatttgaaaaaaagtaaaaaacaattaatgatggtgggatccacttagtggtaggaccca 30709152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 374919 - 375038
Alignment:
Q  112 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 211  Q
    ||||| || ||| |||||||||||   ||| || |||| |||||||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  374919 cgggtcaatatcttctccatttataaatttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 375008  T
Q  212 gtgggacccacttagtggtaggacccacca 241  Q
    ||||||||||||||||  ||||||||||||    
T  375009 gtgggacccacttagtaataggacccacca 375038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 29188588 - 29188698
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||||||||||||    
T  29188588 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgatggtgggaccc 29188677  T
Q  221 acttagtggtaggacccacca 241  Q
     ||||||| |||||| |||||    
T  29188678 gcttagtgataggacgcacca 29188698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 21454582 - 21454520
Alignment:
Q  183 ttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 245  Q
    ||||| ||| ||||| |||| |||||||||||| ||||||||| ||||| ||||||| |||||    
T  21454582 ttgaaaaaagtaaaaaataattaatgatggtggaacccacttaatggtatgacccacaatcta 21454520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 13780506 - 13780543
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  13780506 taatgatggtgggatccacttagtgataggacccacca 13780543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 23459986 - 23459880
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||||||||||   ||| || |||| |||||||  |||||||||||||||||||||          | ||||| |||| |||||||||||||||||    
T  23459986 atcctctccatttataaatttctccatttgttccattcagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggaccc 23459897  T
Q  221 acttagtggtaggaccc 237  Q
    | |||||| ||||||||    
T  23459896 atttagtgataggaccc 23459880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 40254217 - 40254180
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  40254217 taatgatggtgggatccacttagtgataggacccacca 40254180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 311
Target Start/End: Original strand, 40640731 - 40640783
Alignment:
Q  259 tatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 311  Q
    ||||||||||||| ||| ||| |||||||||||||  |||||||| |||||||    
T  40640731 tatctctctccaaattgcaaaactccatttattttaacaaatggagaggatct 40640783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 2e-72; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 114 - 321
Target Start/End: Complemental strand, 50294220 - 50294015
Alignment:
Q  114 ggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggt 213  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  50294220 ggtgaagaccctctccatttacgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggt 50294121  T
Q  214 gggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttc 313  Q
     ||| |||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  50294120 aggatccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatgaagaggatcttc 50294023  T
Q  314 accccacc 321  Q
    ||||||||    
T  50294022 accccacc 50294015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 113 - 319
Target Start/End: Complemental strand, 48327312 - 48327108
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatg 211  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| || |||||||||||||| ||||||||    
T  48327312 gggttaagatcctctccatttatgtgtttatcaatttcttccatttggagatataaaggtacataaaatcttgaaaaaaaataaaatataattaatgatg 48327213  T
Q  212 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 311  Q
    || ||||||||||||||||||||| |||||||||         ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||    
T  48327212 gt-ggacccacttagtggtaggactcaccatctattttttt--tgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatct 48327116  T
Q  312 tcacccca 319  Q
    ||||||||    
T  48327115 tcacccca 48327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 113 - 317
Target Start/End: Original strand, 50484303 - 50484505
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 212  Q
    |||| |||||||||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| ||    
T  50484303 gggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgacgg 50484402  T
Q  213 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 312  Q
    |||||||||||||||||| | ||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  50484403 tgggacccacttagtggttgtacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 50484500  T
Q  313 caccc 317  Q
    |||||    
T  50484501 caccc 50484505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 113 - 317
Target Start/End: Original strand, 12151684 - 12151886
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 212  Q
    |||| ||||||||| |||||||||||||| || |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  12151684 gggttaagatcctccccatttatgtgtttctccatttattcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 12151783  T
Q  213 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 312  Q
    ||||||||||||||||||||||||||| |||||        |||||| ||||||||||||| | ||| ||||||||||||||||||||||| | ||||||    
T  12151784 tgggacccacttagtggtaggacccacaatcta--ttttttgtgtctttctctctccaactggcaaaactccatttattttgccaaatggagaagatctt 12151881  T
Q  313 caccc 317  Q
    |||||    
T  12151882 caccc 12151886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 12381061 - 12380936
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||     
T  12381061 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggact 12380962  T
Q  220 cacttagtggtaggacccaccatcta 245  Q
    ||||||||||||| ||||||||||||    
T  12380961 cacttagtggtagaacccaccatcta 12380936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 12385128 - 12385003
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||     
T  12385128 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggact 12385029  T
Q  220 cacttagtggtaggacccaccatcta 245  Q
    ||||||||||||| ||||||||||||    
T  12385028 cacttagtggtagaacccaccatcta 12385003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 113 - 313
Target Start/End: Original strand, 40328193 - 40328390
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaa-gacacataaaatcttgaacaaaa-taaaatataactaatgat 210  Q
    |||| |||||||||| ||||||||||||| |  |||||||  ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  40328193 gggttaagatcctcttcatttatgtgtttcttcatttctttaatttggagagataaaagacacataaaatcttgaaaaaaagtaaaatataactaatgat 40328292  T
Q  211 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 310  Q
    ||||| |||||||||||||| ||||||||||||||        |||||||  ||||||||| ||| ||| ||||||||||||||||||||||| ||||||    
T  40328293 ggtggaacccacttagtggtgggacccaccatcta---tttttgtgtcta--tctctccaatttgcaaaactccatttattttgccaaatggagaggatc 40328387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 121 - 317
Target Start/End: Complemental strand, 23862106 - 23861908
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacc 219  Q
    ||||||| |||| |||||||| || |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |    
T  23862106 atcctcttcattcatgtgtttctctatttcttcaatttggaaagataaagacacataaaatcttgaaaaaaaataaaatataattaatgatggtgggatc 23862007  T
Q  220 cacttagtggtagga---cccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacc 316  Q
    |||||||||||||||    ||||||||||        |||||||||||||||||||||| ||| || |||||||||||| |||| || ||||| ||||||    
T  23862006 cacttagtggtaggattcaccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacttcatttattttgctaaatagagaggatattcacc 23861909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 120 - 222
Target Start/End: Original strand, 45977946 - 45978048
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| |||||||    
T  45977946 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaacgatgctgggacc 45978045  T
Q  220 cac 222  Q
    |||    
T  45978046 cac 45978048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 7841857 - 7841763
Alignment:
Q  124 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggac 218  Q
    |||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  7841857 ctctccatttatatgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 7841763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 139 - 245
Target Start/End: Original strand, 24977183 - 24977289
Alignment:
Q  139 tttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggaccc 237  Q
    |||||| ||||||| ||||| |||||||||| ||| ||||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||| ||    
T  24977183 tttatccatttcttacatttagagagataaataca-ataaaatcttgaaaaaaaataaaatataactaatgattgtggaacccacttagtggtaggatcc 24977281  T
Q  238 accatcta 245  Q
    ||||||||    
T  24977282 accatcta 24977289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 12380896 - 12380832
Alignment:
Q  254 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  12380896 gtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 12380832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 318
Target Start/End: Complemental strand, 12384963 - 12384899
Alignment:
Q  254 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  12384963 gtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 12384899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 121 - 317
Target Start/End: Complemental strand, 18976452 - 18976260
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||||||||||||  || |  |||||| ||||||||||||||| | ||||  ||||| ||||| ||||||||| |||| |||||||| |||||||     
T  18976452 atcctctccatttatgtccttcttcatttctaccatttggagagatataaacac--aaaattttgaaaaaaataaaa-ataattaatgatgatgggacct 18976356  T
Q  221 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||| |||| ||| ||||||||||        |||||||||||||||||| ||| ||| ||| |||||||||  |||||||| |||||||| ||||    
T  18976355 acttaatggttggatccaccatcta-ttcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaaccc 18976260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 46608525 - 46608409
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    ||||||||||||||||||||  |   | |||||||||||||||||| |||||||||||  || | ||||| ||| ||||| |||| |||||||||||||     
T  46608525 aagatcctctccatttatgtcct---ccatttcttccatttggagaaataaagacaca--aagttttgaaaaaagtaaaaaataattaatgatggtgggt 46608431  T
Q  218 cccacttagtggtaggacccac 239  Q
    ||||||||||||||||||||||    
T  46608430 cccacttagtggtaggacccac 46608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 118 - 219
Target Start/End: Original strand, 2845187 - 2845289
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttct-tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggg 216  Q
    |||||||||||||||||||| ||| || |||||| || ||||||||||||||| ||||| ||||| ||||| | | |||||||||| |||||||||||||    
T  2845187 aagatcctctccatttatgtttttctctatttctatcaatttggagagataaatacacacaaaattttgaaaatagtaaaatataattaatgatggtggg 2845286  T
Q  217 acc 219  Q
    |||    
T  2845287 acc 2845289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 5047533 - 5047418
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    ||||||||||||||||||   | | || ||||||||||||| ||||||||||| |||| ||||  ||||| |||||| || |||| ||||||||||||||    
T  5047533 aagatcctctccatttattactatctccatttcttccatttagagagataaaggcacaaaaaagtttgaa-aaaatataaaataattaatgatggtggga 5047435  T
Q  218 cccacttagtggtagga 234  Q
    ||||| |||||||||||    
T  5047434 cccacatagtggtagga 5047418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 317
Target Start/End: Complemental strand, 7840739 - 7840635
Alignment:
Q  211 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 310  Q
    |||||||||| |||| |||||||||||| ||||||        |||||||||||||||||||||  ||| ||||||||||| ||||||||| | ||||||    
T  7840739 ggtgggacccgcttaatggtaggacccatcatctatttctt--gtgtctatctctctccaacttacaaaactccatttattctgccaaatgaataggatc 7840642  T
Q  311 ttcaccc 317  Q
    |||||||    
T  7840641 ttcaccc 7840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 1609691 - 1609617
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa 192  Q
    |||||||||| ||||||||| |||  | ||||||| ||||| ||||| |||||||||||||||||||||| ||||    
T  1609691 aagatcctcttcatttatgtcttttcccatttctttcatttagagaggtaaagacacataaaatcttgaagaaaa 1609617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 32887905 - 32887812
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccac 239  Q
    ||||||| |||||||||||||| |||| || ||||  ||||| |||||  || |||| |||||||||||||||||| ||| |||||||| ||||    
T  32887905 atttctttcatttggagagatatagactcaaaaaagtttgaaaaaaattgaaaataattaatgatggtgggacccatttaatggtaggatccac 32887812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 45978064 - 45978124
Alignment:
Q  257 tctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||||||| ||| |||||||||||||  ||||| || |||||||||||||    
T  45978064 tctatctctctccaacttgcaaaactccatttattttatcaaatagagaggatcttcaccc 45978124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 303
Target Start/End: Original strand, 39426166 - 39426315
Alignment:
Q  152 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnn 251  Q
    |||||||||||||||| |||| || |   ||||  | ||| ||||| |||| ||||||| |||||||||| ||||||||||||||||| |||||          
T  39426166 tccatttggagagatatagactcaaattttcttagaaaaagtaaaaaataattaatgatagtgggacccaattagtggtaggacccactatcta--tttt 39426263  T
Q  252 nngtgtctatctctctccaacttgtaaatctccatttattttgccaaatgga 303  Q
      |||||||||||||||||| ||||  |  ||||||||||||  ||||||||    
T  39426264 atgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgga 39426315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 680170 - 680101
Alignment:
Q  111 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 180  Q
    |||||| | ||||||||||||||||   |||||||||||  || ||||||||||||||||||||| ||||    
T  680170 acgggttaggatcctctccatttataactttatcaatttactctatttggagagataaagacacacaaaa 680101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 234
Target Start/End: Original strand, 23916013 - 23916124
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    ||||||||||||| | | ||| || |||| || |||||||||| ||||| ||||| ||||| ||||| ||| |  || |||| |||||||||||||||||    
T  23916013 atcctctccatttgtatttttctccatttatttcatttggagatataaaaacaca-aaaat-ttgaaaaaagtttaaaataattaatgatggtgggaccc 23916110  T
Q  221 acttagtggtagga 234  Q
    || |||||||||||    
T  23916111 acgtagtggtagga 23916124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 44483718 - 44483815
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatct 244  Q
    ||||||| |||||| ||||||||||||||  | ||| ||| || ||||||||| |||| |||||||||||| | ||| ||| ||||||||||||| ||||    
T  44483718 atttcttgcatttgaagagataaagacac--acaattttgaaaaaaaataaaaaataattaatgatggtggaatccatttaatggtaggacccacaatct 44483815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 52280117 - 52280069
Alignment:
Q  193 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 241  Q
    ||||| |||| |||||||||||||| |||||||||| ||||||||||||    
T  52280117 taaaaaataattaatgatggtgggatccacttagtgataggacccacca 52280069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 7844939 - 7845026
Alignment:
Q  147 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtagga 234  Q
    ||||||||||||| ||||||||||| ||| | ||  ||||| ||| || ||  ||| |||| |||||||||| |||||||||||||||    
T  7844939 tttcttccatttgaagagataaagatacaaagaagtttgaaaaaagtataaactaattaataatggtgggacacacttagtggtagga 7845026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 40988643 - 40988721
Alignment:
Q  124 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataa 202  Q
    ||||||||||||   ||| || |||| ||| ||||||||||||||||||||| ||||| ||||| ||| ||||| ||||    
T  40988643 ctctccatttataactttctccattttttctatttggagagataaagacacacaaaattttgaaaaaagtaaaaaataa 40988721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 6948899 - 6948862
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  6948899 taatgatggtgggatccacttagtgataggacccacca 6948862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 228
Target Start/End: Original strand, 19910469 - 19910583
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttc-----ttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatg 211  Q
    |||| ||||| ||||||||| ||| || |||||     ||||||||||||||||||  ||||||||||| ||| || |||||||||||||| |||| |||    
T  19910469 aagaacctcttcatttatgtctttctctatttcttccattccatttggagagataa--acacataaaattttgaaaaaaaataaaatataattaataatg 19910566  T
Q  212 gtgggacccacttagtg 228  Q
    ||  ||||||| |||||    
T  19910567 gtatgacccacctagtg 19910583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 24413400 - 24413310
Alignment:
Q  143 tcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccat 242  Q
    |||||||||||||||| ||| ||||| |||||| ||||||||||| | |||          |||||||||||||||||| ||| || |||||||||||||    
T  24413400 tcaatttcttccattttgagggataaggacacaaaaaatcttgaaaataat----------taatgatggtgggacccatttaatgataggacccaccat 24413311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Complemental strand, 30077794 - 30077725
Alignment:
Q  111 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 180  Q
    |||||| || |||||||||||||||   ||| || |||| |||||||| |||| ||||||||||||||||    
T  30077794 acgggtcaatatcctctccatttataaatttctctatttgttccatttagagaaataaagacacataaaa 30077725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 45970804 - 45970861
Alignment:
Q  154 catttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 211  Q
    |||||| ||||||||||||||| ||||| ||||| ||| ||||| |||| ||||||||    
T  45970804 catttgaagagataaagacacacaaaattttgaaaaaagtaaaaaataattaatgatg 45970861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 42720882 - 42720819
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    ||||||| ||||| |||||||||||||||||||| | ||||| |||||| || |||| |||||||    
T  42720882 atttctttcatttagagagataaagacacataaagttttgaa-aaaatacaaaataaataatgat 42720819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 6e-72; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 111 - 317
Target Start/End: Complemental strand, 9559213 - 9559010
Alignment:
Q  111 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    ||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  9559213 acgggtgaagatc-tctccatttatatgtttctcgatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgat 9559115  T
Q  211 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 310  Q
    |||||||||||||||||||||||||||||||||||        || ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  9559114 ggtgggacccacttagtggtaggacccaccatcta--ttttttgtatctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatc 9559017  T
Q  311 ttcaccc 317  Q
    |||||||    
T  9559016 ttcaccc 9559010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 116 - 319
Target Start/End: Original strand, 4888387 - 4888588
Alignment:
Q  116 tgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgg 215  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||    
T  4888387 tgaagatcctcttcatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttaaaaaacataaaatataattaatgatggtgg 4888486  T
Q  216 gacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcac 315  Q
    |||| ||||||||||||||||||| |||||        |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  4888487 gacctacttagtggtaggacccactatcta--ttttttgtgtctatctctctccaacttgcaaatctccatttattttgtcaaatggagaggatcttcac 4888584  T
Q  316 ccca 319  Q
    ||||    
T  4888585 ccca 4888588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 124 - 317
Target Start/End: Original strand, 21151080 - 21151271
Alignment:
Q  124 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 223  Q
    |||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  21151080 ctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccact 21151179  T
Q  224 tagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||| || |||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  21151180 tagtggtaggatcctccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 21151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 120 - 318
Target Start/End: Original strand, 16366442 - 16366638
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||| ||||||||||||||||| || |||||||| ||||||||||||||| |||| |||||||||||| ||| |||||||||| |||||||||||||||     
T  16366442 gatcatctccatttatgtgtttctccatttcttcaatttggagagataaaaacacgtaaaatcttgaaaaaagtaaaatataattaatgatggtgggaca 16366541  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    ||||||||||||||| ||||||||||         ||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||    
T  16366542 cacttagtggtaggatccaccatctatttctta--tgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 16366638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 120 - 318
Target Start/End: Original strand, 18198180 - 18198376
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||||||| ||||| |||||||||  |||||||||||||||| |||||||||||||| |||||||||||||||     
T  18198180 gatcctctccatttatgtgtttctccatttcttcaatttgtagagataaaatcacataaaatcttgaaaaaaataaaatataattaatgatggtgggact 18198279  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    |||||||||| || ||||||||||||        |||||||| | ||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  18198280 cacttagtggcagaacccaccatcta--ttttttgtgtctatttatctccaatttgcaaaactccatttattttgccaaatggagaggatcttcacccc 18198376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 122 - 316
Target Start/End: Complemental strand, 45260576 - 45260384
Alignment:
Q  122 tcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccca 221  Q
    ||||||| |||||||||||| || |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||| ||||| |||    
T  45260576 tcctctctatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggatcca 45260477  T
Q  222 cttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacc 316  Q
    ||||||||||||| |||| |||||        |||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||    
T  45260476 cttagtggtaggatccacaatcta--ttttttgtgtctatctctctccaacttgcaaaactcaatttattttgccaaatggagaggatcttcacc 45260384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 125 - 317
Target Start/End: Original strand, 7362497 - 7362686
Alignment:
Q  125 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 224  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||| ||    
T  7362497 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaacccattt 7362596  T
Q  225 agtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||| |||||||||||||        |||||||||||||||||| ||| ||| |||||||||||||| |||||||| | |||||||||||    
T  7362597 agtggtacgacccaccatcta--ttttttgtgtctatctctctccaatttgcaaaactccatttattttgtcaaatggaga-gatcttcaccc 7362686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 120 - 314
Target Start/End: Complemental strand, 47226224 - 47226035
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||| | ||| |||||||||| ||||||||||||||||    
T  47226224 gatcctctccatttatgtgtttctctatttcttcaatttggagagataaa-acacataaaatcttggaaaaagtaaaatataattaatgatggtgggacc 47226126  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 314  Q
    || |||||||| ||||||||||| |         |||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  47226125 catttagtggtgggacccaccatat----tttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 47226035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 120 - 318
Target Start/End: Original strand, 12139252 - 12139447
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga-c 218  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||  |||||||||||||| || ||| |||||||||| |||||||||||||| |    
T  12139252 gatcctctccatttatgtgtttctccatttcttcaatttggagagataa--acacataaaatcttaaaaaaagtaaaatataattaatgatggtgggacc 12139349  T
Q  219 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    ||||||| |||||||||||||||||||        |||||||||||||||||||||| ||| || |||||||||||||||||| | || |||||||||||    
T  12139350 ccacttaatggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacttcatttattttgccaaatgaagagaatcttcacccc 12139447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 120 - 319
Target Start/End: Original strand, 44647889 - 44648085
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgg--ga 217  Q
    |||||||||||||||||||||| || |||||||| |||||   ||||||||||||||||||||||||| ||  |||||||||| ||||||||| ||  ||    
T  44647889 gatcctctccatttatgtgtttctccatttcttcaatttg---agataaagacacataaaatcttgaaaaatgtaaaatataattaatgatggagggaga 44647985  T
Q  218 cccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||| ||| ||||||||||        |||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  44647986 cccacttagtggtcggatccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 44648083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 25084879 - 25084754
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||| ||  ||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  25084879 gatcctctccatttatgtgtttctccatttttttaatttgaagagataaagacacataaaattttgaaaaaaataaaatataattaatgatggtgggacc 25084780  T
Q  220 cacttagtggtaggacccaccatcta 245  Q
    ||||||||||||||||||||||||||    
T  25084779 cacttagtggtaggacccaccatcta 25084754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 112 - 319
Target Start/End: Original strand, 33450422 - 33450628
Alignment:
Q  112 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 211  Q
    ||||| || ||||||| |||||||||  || || |||||| ||||||||||||||| | ||||| ||||| ||||| ||||||||| |||| ||||||||    
T  33450422 cgggtcaaaatcctcttcatttatgtccttctccatttctaccatttggagagatataaacacacaaaattttgaaaaaaataaaaaataattaatgatg 33450521  T
Q  212 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 311  Q
     |||||||||||||||||| ||||||||||||||        |||||||||||||||||| ||| ||| ||| |||||||||  |||||||| |||||||    
T  33450522 atgggacccacttagtggttggacccaccatcta-ttcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatct 33450620  T
Q  312 tcacccca 319  Q
    | ||||||    
T  33450621 taacccca 33450628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 121 - 318
Target Start/End: Complemental strand, 47500433 - 47500237
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||||||||||||  || || |||||| |||||| |||||||| ||||||| ||||| ||||| ||||||||| |||| |||||||| ||||||||    
T  47500433 atcctctccatttatgtccttctccatttctaccatttagagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 47500334  T
Q  221 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    |||||||||| ||||||||||||||        |||||||||||||||||| ||  ||| ||| |||||||||   ||||||| |||||||| |||||    
T  47500333 acttagtggttggacccaccatcta-ttcttttgtgtctatctctctccaaattacaaaactcaatttattttagtaaatggagaggatcttaacccc 47500237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 245
Target Start/End: Original strand, 29630970 - 29631097
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    ||||||||||||||| |||| ||| || ||||||| |||||||||| ||||||||||||||||| ||||| ||| ||||  |||| ||||||| ||||||    
T  29630970 aagatcctctccattcatgtctttctccatttctttcatttggagatataaagacacataaaattttgaaaaaagtaaagaataattaatgatagtggga 29631069  T
Q  218 cccacttagtggtaggacccaccatcta 245  Q
    || || ||||||| |||||||| |||||    
T  29631070 cctacatagtggttggacccactatcta 29631097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 121 - 293
Target Start/End: Complemental strand, 34986095 - 34985925
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacc 219  Q
    ||||||||||||||||| ||| || |||||| ||||||||||||||| ||  ||||||||| ||| || ||||||||| |||| |||||||| ||||||     
T  34986095 atcctctccatttatgtctttctccatttctaccatttggagagatatag--acataaaattttgaaaaaaaataaaaaataattaatgatgatgggact 34985998  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttatttt 293  Q
    || ||||||||  |||||||||||||        |||||||||||||||||| ||| ||| ||| |||||||||    
T  34985997 catttagtggtttgacccaccatcta-ttcttttgtgtctatctctctccaaattgcaaaactcaatttatttt 34985925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 32915881 - 32915999
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    ||||||||| ||||||||||  || || |||||||||||||||||||||||||||||| ||||  ||    |||| ||||||||| | ||||||||||||    
T  32915881 aagatcctccccatttatgttcttctccatttcttccatttggagagataaagacacaaaaaagttt---taaaaaaaaatataattcatgatggtggga 32915977  T
Q  218 cccacttagtggtaggacccac 239  Q
    | |||||| |||||||||||||    
T  32915978 ctcacttaatggtaggacccac 32915999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 171 - 244
Target Start/End: Complemental strand, 39855913 - 39855840
Alignment:
Q  171 acacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatct 244  Q
    |||| |||||||||||| ||| |||||| ||| |||||||| |||||||||||||||||||||||| |||||||    
T  39855913 acacttaaaatcttgaaaaaagtaaaatttaattaatgatgatgggacccacttagtggtaggaccgaccatct 39855840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 40019628 - 40019712
Alignment:
Q  143 tcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagt 227  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| ||| || ||  ||| ||||||||||||||| || |||||    
T  40019628 tcaatttcctccatttggagagataaaaacacaaaaaatcttgaaaaaagtataaagtaattaatgatggtgggactcatttagt 40019712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 30153305 - 30153225
Alignment:
Q  148 ttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtg 228  Q
    |||||||||||||||||||||||||| | ||||  ||||| |||||| || |||| |||||||||| | || |||||||||    
T  30153305 ttcttccatttggagagataaagacaaaaaaaaaattgaaaaaaatataaaataattaatgatggtagtactcacttagtg 30153225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 314
Target Start/End: Complemental strand, 47271166 - 47271107
Alignment:
Q  254 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 314  Q
    |||||||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||||||    
T  47271166 gtgtctatctctctccaaattgcaaa-ctccatttattttgctaaatggagaggatcttca 47271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 46802448 - 46802357
Alignment:
Q  152 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 245  Q
    |||||||||||||||||| |||||  |||  ||||| |||  | || |||| ||| | ||||||||||||||||||||||||||||||| ||||    
T  46802448 tccatttggagagataaaaacaca--aaagtttgaagaaagcataaaataattaacggtggtgggacccacttagtggtaggacccaccgtcta 46802357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 47799978 - 47799933
Alignment:
Q  193 taaaatataactaatgatggtgggacccacttagtggtaggaccca 238  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  47799978 taaaaaataattaatgatggtgggacccacttagtgataggaccca 47799933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 19889183 - 19889066
Alignment:
Q  112 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 211  Q
    ||||| || ||||||||||| |||   ||| || |||| |||||||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  19889183 cgggtaaatatcctctccatctataaatttctccatttattccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 19889094  T
Q  212 gtgggacccacttagtggtaggacccac 239  Q
    |||| |||||||||||| ||||||||||    
T  19889093 gtggaacccacttagtgataggacccac 19889066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 30588532 - 30588576
Alignment:
Q  193 taaaatataactaatgatggtgggacccacttagtggtaggaccc 237  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||    
T  30588532 taaaaaataattaatgatggtgggacccacttagtgataggaccc 30588576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 32916104 - 32916212
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||||||||||   ||| || ||||||||||||| |||||||||| ||||| ||||          ||||||| |||| |||||||||||| | ||    
T  32916104 atcctctccatttataactttctccatttcttccattttgagagataaatacacacaaaa----------aataaaaaataattaatgatggtggaatcc 32916193  T
Q  221 acttagtggtaggacccac 239  Q
    ||||||||||| |||||||    
T  32916194 acttagtggtatgacccac 32916212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 47080360 - 47080470
Alignment:
Q  125 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 224  Q
    |||||||||||   ||| || |||| ||| |||| |||||||| ||||||||||||  |  || ||||||||| ||   ||||||||||||||||| |||    
T  47080360 tctccatttataaatttctccatttgttctatttagagagatagagacacataaaaagtaaaaaaaaataaaaaat---taatgatggtgggacccgctt 47080456  T
Q  225 agtggtaggaccca 238  Q
    |||| |||||||||    
T  47080457 agtgataggaccca 47080470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 11828991 - 11828945
Alignment:
Q  189 aaaataaaatataactaatgatggtgggacccacttagtggtaggac 235  Q
    ||||||||| |||| |||||||||||| ||||||||| |||||||||    
T  11828991 aaaataaaaaataattaatgatggtggaacccacttaatggtaggac 11828945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 19027751 - 19027713
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccaccat 242  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  19027751 taatgatggtgggatccacttagtgataggacccaccat 19027713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 242
Target Start/End: Original strand, 20726885 - 20726923
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccaccat 242  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  20726885 taatgatggtgggatccacttagtgataggacccaccat 20726923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 4269187 - 4269224
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  4269187 taatgatggtgggatccacttagtgataggacccacca 4269224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 180
Target Start/End: Complemental strand, 6568460 - 6568419
Alignment:
Q  139 tttatcaatttcttccatttggagagataaagacacataaaa 180  Q
    |||||| |||||| ||||||||||||||||||||||| ||||    
T  6568460 tttatccatttctaccatttggagagataaagacacacaaaa 6568419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 14696825 - 14696788
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  14696825 taatgatggtgggatccacttagtgataggacccacca 14696788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 30102501 - 30102538
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  30102501 taatgatggtgggatccacttagtgataggacccacca 30102538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 6882209 - 6882149
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 180  Q
    ||||||||| ||||||   ||| || |||| ||||||||| ||||||||||||||||||||    
T  6882209 gatcctctcaatttataactttctccatttgttccatttgaagagataaagacacataaaa 6882149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 25331767 - 25331827
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 180  Q
    ||||||||||||||||   ||||||||||| ||||||||| ||||| ||| ||||| ||||    
T  25331767 gatcctctccatttataactttatcaatttattccatttgaagagacaaatacacacaaaa 25331827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 4e-67; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 120 - 318
Target Start/End: Original strand, 4804372 - 4804568
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  4804372 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 4804471  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  4804472 cacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacccc 4804568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 113 - 316
Target Start/End: Complemental strand, 1249304 - 1249105
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 212  Q
    |||| |||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  1249304 gggttaagatcctctccatttatgtgtttctccatttcttcaatttggaaagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 1249205  T
Q  213 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 312  Q
    |||||||||||||||||||||||||||||||||         ||||| ||||||||||||||  ||| ||||||||||||||||||||||| ||||||||    
T  1249204 tgggacccacttagtggtaggacccaccatctattttt----tgtctgtctctctccaacttacaaaactccatttattttgccaaatggagaggatctt 1249109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 113 - 314
Target Start/End: Original strand, 27826455 - 27826654
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 212  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||  | |||||||||||||| |||||||||    
T  27826455 gggtgaagatcctctccatttatgtgtttctcaatttcttccattttgagagataaagacacataaaaaattttaaaaaataaaatataattaatgatgg 27826554  T
Q  213 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 312  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||| | |||| |||||| || ||||||| ||||||||| ||||||||    
T  27826555 tgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctcaaccttgcaaatcttcagttattttaccaaatggagaggatctt 27826652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 120 - 317
Target Start/End: Original strand, 7162008 - 7162203
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    ||||||||| ||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  7162008 gatcctctctatttacgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 7162107  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    |||||||| |||||||||||||||||        |||||||||||||||||||||| ||| |||||||||||||  |||||||| | |||||||||||    
T  7162108 cacttagtagtaggacccaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 7162203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 21159516 - 21159323
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||| |||||||||    | |||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  21159516 gatcctctccgtttatgtgt----ccatttcttcaatttggagatataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 21159421  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 319  Q
    ||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| || ||||||||||  |||||||| |||||||||||||||    
T  21159420 cacttagtggtaggacccaccatcta--ttttttgtgtctatttctctccaacttgcaaaacttcatttattttaacaaatggagaggatcttcacccca 21159323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 136 - 318
Target Start/End: Original strand, 17944102 - 17944282
Alignment:
Q  136 gtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggac 235  Q
    |||||| || |||||||| ||||||||||||||| ||||||||||||||| | ||| |||||||||| |||||||||||||||||| |||||||||||||    
T  17944102 gtgtttctccatttcttcaatttggagagataaaaacacataaaatcttggaaaaagtaaaatataattaatgatggtgggacccatttagtggtaggac 17944201  T
Q  236 ccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    | ||||||||        |||||||||||||||||||||  ||| ||||||||||||||||||||| | ||||||||||||||    
T  17944202 ctaccatcta--ttttttgtgtctatctctctccaacttacaaaactccatttattttgccaaatgaagaggatcttcacccc 17944282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 146 - 317
Target Start/End: Original strand, 12412587 - 12412756
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 245  Q
    |||||||| ||||||||||||||| | ||||||||| ||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  12412587 atttcttcaatttggagagataaaaatacataaaattttgaaaaaagtaaaatataattaatgatggtggaacccacttagtggtaggacccaccatcta 12412686  T
Q  246 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
            |||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||| ||||    
T  12412687 --tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaagatctttaccc 12412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 29698087 - 29698212
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  29698087 gatcctctccatttatgtgtttctccatttcttcaatttggagaaataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 29698186  T
Q  220 cacttagtggtaggacccaccatcta 245  Q
    |||||| |||||||| ||||||||||    
T  29698187 cacttaatggtaggatccaccatcta 29698212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 171 - 317
Target Start/End: Complemental strand, 13089849 - 13089705
Alignment:
Q  171 acacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctcca 270  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||        |||||||||||||||||    
T  13089849 acacataaaattttgaaaaaaataaaatataattaatgatggtggggcccacttagtggtaggacccaccatcta--tattttgtgtctatctctctcca 13089752  T
Q  271 acttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||| ||| | ||||||||||||||||||||| |||||||||||||    
T  13089751 acttgcaaaacaccatttattttgccaaatggagaggatcttcaccc 13089705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 120 - 222
Target Start/End: Original strand, 32737798 - 32737900
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||| |||    
T  32737798 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtggaacc 32737897  T
Q  220 cac 222  Q
    |||    
T  32737898 cac 32737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 121 - 314
Target Start/End: Complemental strand, 227714 - 227522
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    ||||||| |||||||||| || || |||||| | ||||||||||||| ||||||| ||| | ||||| ||  ||||| ||||  ||||||| ||||| ||    
T  227714 atcctcttcatttatgtgcttctccatttctacaatttggagagatatagacacacaaagttttgaaaaaggtaaaaaataatcaatgatgatgggatcc 227615  T
Q  221 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 314  Q
    |||||||||||||||||||||||||        ||||||||||||||||||  || ||| |||||||||||||  |||||||| ||||||||||    
T  227614 acttagtggtaggacccaccatcta-ttcttttgtgtctatctctctccaaaatgcaaaactccatttattttagcaaatggagaggatcttca 227522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 146 - 234
Target Start/End: Original strand, 30460770 - 30460858
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtagga 234  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||| | || ||||| || ||| ||||||||    
T  30460770 atttcttctatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaataacggcgggactcatttaatggtagga 30460858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 32737913 - 32737976
Alignment:
Q  254 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||||||| || ||| ||| ||||||||||||||||||| |||||||||||||    
T  32737913 gtgtctatctctctccaacctgcaaaactctatttattttgccaaatggagaggatcttcaccc 32737976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 152 - 319
Target Start/End: Complemental strand, 2800730 - 2800565
Alignment:
Q  152 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnn 251  Q
    |||||||||||||||| | || || ||||  ||||| ||| ||||| ||||  ||||||||||||||||||||| ||||| || |||| |||||          
T  2800730 tccatttggagagatataaactcaaaaaaaattgaaaaaagtaaaaaataatcaatgatggtgggacccacttaatggtatgatccactatcta--tttt 2800633  T
Q  252 nngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 319  Q
      |||||||||||||||||| ||||  || |||||| |||||  |||||||| |||||| | ||||||    
T  2800632 atgtgtctatctctctccaaattgtgtatttccattaattttatcaaatggagaggatcctaacccca 2800565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 17398818 - 17398773
Alignment:
Q  147 tttcttccatttggagagataaagacacataaaatcttgaacaaaa 192  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||    
T  17398818 tttcctccatttggagagataaagacacataaaatcttgaaaaaaa 17398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 1516314 - 1516238
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 222  Q
    ||||||| |||||| | ||||||| ||||||||||| || || ||| |||||||||| |||||||||||||| ||||    
T  1516314 atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1516238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 1518403 - 1518327
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 222  Q
    ||||||| |||||| | ||||||| ||||||||||| || || ||| |||||||||| |||||||||||||| ||||    
T  1518403 atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1518327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 24484876 - 24484924
Alignment:
Q  193 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 241  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  24484876 taaaaaataattaatgatggtgggacccacttagtgataggacccacca 24484924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 317
Target Start/End: Complemental strand, 1516219 - 1516163
Alignment:
Q  260 atctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||| |||||||| ||||    
T  1516219 atctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaaccc 1516163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 317
Target Start/End: Complemental strand, 1518308 - 1518252
Alignment:
Q  260 atctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||| |||||||| ||||    
T  1518308 atctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaaccc 1518252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 2720366 - 2720411
Alignment:
Q  189 aaaataaaatataactaatgatggtgggacccacttagtggtagga 234  Q
    |||||| || |||| |||||||||||||||||||||||||||||||    
T  2720366 aaaatataaaataattaatgatggtgggacccacttagtggtagga 2720411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 7215919 - 7215816
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatgga 303  Q
    ||||||| |||||||||| ||||||||||||||||| |||||        |||||||||||||||||| ||||  |  ||||||||||||  ||||||||    
T  7215919 taatgatagtgggacccaattagtggtaggacccactatcta--ttttatgtgtctatctctctccaaattgtgcacttccatttattttatcaaatgga 7215822  T
Q  304 caggat 309  Q
     |||||    
T  7215821 gaggat 7215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 317
Target Start/End: Complemental strand, 1515554 - 1515498
Alignment:
Q  260 atctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    |||||||||||| ||| ||| |||||||||||||||||||| || |||||||| ||||    
T  1515554 atctctctccaaattgcaaa-ctccatttattttgccaaattgataggatcttaaccc 1515498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 7098263 - 7098226
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  7098263 taatgatggtgggatccacttagtgataggacccacca 7098226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 17275921 - 17276014
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccac 239  Q
    |||| ||| |||||||||||||||||  ||||||||||| || ||||||||| |||| |||  || ||||| | ||  ||||||| ||||||||    
T  17275921 atttattctatttggagagataaagatgcataaaatcttaaaaaaaataaaaaataattaactatagtggggctcatatagtggtgggacccac 17276014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 28696673 - 28696626
Alignment:
Q  255 tgtctatctctctccaacttgtaaatctccatttattttgccaaatgga 303  Q
    ||||||||||||||||| ||| ||| ||| |||||||||||||||||||    
T  28696673 tgtctatctctctccaaattgcaaa-ctcaatttattttgccaaatgga 28696626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 32254113 - 32254061
Alignment:
Q  189 aaaataaaatataactaatgatggtgggacccacttagtggtaggacccacca 241  Q
    ||||||||| |||| ||||||| ||||||| |||||| || ||||||||||||    
T  32254113 aaaataaaaaataattaatgatagtgggactcacttaatgataggacccacca 32254061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 6e-66; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 113 - 317
Target Start/End: Complemental strand, 19902076 - 19901874
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 212  Q
    |||| |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||    
T  19902076 gggttaagatcctctccatttatgtgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 19901977  T
Q  213 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 312  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||||    
T  19901976 tgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 19901879  T
Q  313 caccc 317  Q
    |||||    
T  19901878 caccc 19901874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 113 - 317
Target Start/End: Original strand, 24073534 - 24073735
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 212  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| |||| || |||||| |||||||||    
T  24073534 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagatgaaggcacataaaatcttgaa-aaaaaaatatataattaatgatgg 24073632  T
Q  213 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 312  Q
     ||||||||||||||||||||||||||||||||        |||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||    
T  24073633 cgggacccacttagtggtaggacccaccatcta--tttgttgtgtctatctctctccaacttacaaatctccatttattttgccaaatggggaggatctt 24073730  T
Q  313 caccc 317  Q
    |||||    
T  24073731 caccc 24073735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 120 - 318
Target Start/End: Original strand, 56558203 - 56558399
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  56558203 gatcctctccatttatatgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 56558302  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    ||||||||| ||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  56558303 cacttagtgataggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 56558399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 121 - 316
Target Start/End: Original strand, 34778346 - 34778539
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    ||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  34778346 atcctctccatttatgtgtttctccatttcttcaatgtggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 34778445  T
Q  221 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacc 316  Q
    |||||||||||||| ||||||||||        |||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  34778446 acttagtggtaggatccaccatcta--ttttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 34778539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 120 - 318
Target Start/End: Complemental strand, 5763313 - 5763117
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||| ||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  5763313 gatcatctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 5763214  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    ||||||||||||||||||||||||||        || ||||||||||||||||||||||| |||||| ||||||||||||| || ||||||||||||||    
T  5763213 cacttagtggtaggacccaccatcta--ttttttgtttctatctctctccaacttgtaaaactccatatattttgccaaattgagaggatcttcacccc 5763117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 120 - 317
Target Start/End: Complemental strand, 33247279 - 33247086
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||  ||| |||||||||||||| |||||||||||| |||    
T  33247279 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc--gaaaaaaataaaatataattaatgatggtggaacc 33247182  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    || |||||||||| ||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  33247181 catttagtggtagaacccaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 33247086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 113 - 317
Target Start/End: Original strand, 23610559 - 23610761
Alignment:
Q  113 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 212  Q
    |||| |||||||||||||||||| ||||| || |||||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||  |||||||||    
T  23610559 gggttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagatacataaaatcttgaaaaaagtaaaatatatttaatgatgg 23610658  T
Q  213 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 312  Q
    ||||||||||||||||||| |||||||||||||        |||||||||||||||||||||| ||| |||||||||||||  |||||||| ||||||||    
T  23610659 tgggacccacttagtggtatgacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagaggatctt 23610756  T
Q  313 caccc 317  Q
    |||||    
T  23610757 caccc 23610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 132 - 317
Target Start/End: Complemental strand, 3952309 - 3952126
Alignment:
Q  132 ttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggta 231  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||||    
T  3952309 ttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccacttagtggta 3952210  T
Q  232 ggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||         |||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||    
T  3952209 ggacccaccatctattttttt--tgtctatctctctccaacttgccaaactccatttattttgccaaatggagaggatcttcaccc 3952126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 120 - 317
Target Start/End: Complemental strand, 18207191 - 18206996
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| ||  |||||||||| |||||||| |||||||    
T  18207191 gatcctctccatttatgtgtttctcaatttcttcaatttggaaagataaagacacataaaatcttgaaaaaggtaaaatataattaatgatgatgggacc 18207092  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||||||||||||||         |||||||||||||| |||||| ||| || ||||||||||| |||||||| |||||||||||||    
T  18207091 cacttagtggtaggacccaccatctattttttt--tgtctatctctctctaacttgcaaaactacatttattttgtcaaatggagaggatcttcaccc 18206996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 121 - 317
Target Start/End: Complemental strand, 5416617 - 5416422
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa--taaaatataactaatgatggtgggac 218  Q
    |||||||| |||||||||||| || |||||||| ||||||| |||||||||||||||||||||| || ||||  |||||||||| |||||||||||||||    
T  5416617 atcctctcaatttatgtgtttctccatttcttcaatttggacagataaagacacataaaatctttaaaaaaaagtaaaatataattaatgatggtgggac 5416518  T
Q  219 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||||||||| |||||        |||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  5416517 ccacttagtggtaggacccacaatcta---tttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 5416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 118 - 318
Target Start/End: Complemental strand, 38079873 - 38079675
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    ||||||||||||||||||| |||| || |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| |    
T  38079873 aagatcctctccatttatgcgtttctccattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaa 38079774  T
Q  218 cccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
     ||||||||| |||||||||||||||||        ||||||||||||||| |||| | ||| ||||||||||||||  ||||||| |||||||||||||    
T  38079773 tccacttagtagtaggacccaccatcta--tttcttgtgtctatctctctcaaactagcaaaactccatttattttgttaaatggagaggatcttcaccc 38079676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 12241559 - 12241440
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  12241559 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 12241460  T
Q  220 cacttagtggtaggacccac 239  Q
    ||||||||||||||||||||    
T  12241459 cacttagtggtaggacccac 12241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 124 - 317
Target Start/End: Complemental strand, 33262699 - 33262508
Alignment:
Q  124 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 223  Q
    |||||||||||||| ||| || |||||||| ||||||||||||||||||||||||||| || || ||| |||||||||| |||||||||||||||| | |    
T  33262699 ctctccatttatgtatttttctatttcttcaatttggagagataaagacacataaaattttaaaaaaagtaaaatataattaatgatggtgggacctatt 33262600  T
Q  224 tagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||| ||||||||||        ||||||||||||||| |||||| ||| | | |||||||||||||||| || |||||||||||||    
T  33262599 tagtggtaggatccaccatcta--ttttttgtgtctatctctctctaacttgcaaaacacaatttattttgccaaatagagaggatcttcaccc 33262508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 120 - 317
Target Start/End: Original strand, 39862441 - 39862636
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||||||| ||     
T  39862441 gatcctcttcatttatgtgtttctcattttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaact 39862540  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    || |||||| |||||| |||||||||        ||||||||||||||| |||||| |||  || |||||||||  |||||||| |||||||||||||    
T  39862541 catttagtgataggacacaccatcta--ttttttgtgtctatctctctcaaacttgcaaaattctatttattttatcaaatggagaggatcttcaccc 39862636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 120 - 222
Target Start/End: Original strand, 12153095 - 12153197
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  12153095 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 12153194  T
Q  220 cac 222  Q
    |||    
T  12153195 cac 12153197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 163 - 303
Target Start/End: Original strand, 30567868 - 30568006
Alignment:
Q  163 agataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatc 262  Q
    ||||||||||||||||||| ||||| ||| |||||||||| |||||||| ||| |||||||||||||||||||||||||||||        |||||||||    
T  30567868 agataaagacacataaaattttgaaaaaagtaaaatataattaatgatgatggaacccacttagtggtaggacccaccatcta--ttttttgtgtctatc 30567965  T
Q  263 tctctccaacttgtaaatctccatttattttgccaaatgga 303  Q
    ||||| ||||||| ||| |||||||||||||||||||||||    
T  30567966 tctcttcaacttgcaaaactccatttattttgccaaatgga 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 175 - 317
Target Start/End: Complemental strand, 12312572 - 12312431
Alignment:
Q  175 ataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaactt 274  Q
    |||||||||| || ||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||         ||||||||||||||||||||    
T  12312572 ataaaatcttaaagaaagtaaaatataattaatgatgatgggacccacttagtggtaggatccaccatctatttttttt-tgtctatctctctccaactt 12312474  T
Q  275 gtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    | ||| ||||||||||||||||||||||| |||||||||||||    
T  12312473 gcaaaactccatttattttgccaaatggagaggatcttcaccc 12312431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 47922226 - 47922101
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    ||||||||| |||||||||||| || |||||||| |||| ||||||||||||||| |||||| ||||| |||||||||||||  |||||||||||| |||    
T  47922226 gatcctctcaatttatgtgtttctccatttcttcaatttagagagataaagacacgtaaaatattgaaaaaaataaaatatatttaatgatggtggaacc 47922127  T
Q  220 cacttagtggtaggacccaccatcta 245  Q
    |||||||||||| ||||||| |||||    
T  47922126 cacttagtggtaagacccactatcta 47922101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 52018707 - 52018795
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatg 208  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||    
T  52018707 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatg 52018795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 312
Target Start/End: Complemental strand, 47922526 - 47922327
Alignment:
Q  112 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 211  Q
    ||||| || ||||||||||||||| | |||||| |||||| ||||||| || |||| | ||||| ||| | ||||| ||| ||||| |||| ||  ||||    
T  47922526 cgggtcaaaatcctctccatttatttctttatccatttctaccatttgtagtgatataaacacacaaagttttgaaaaaagtaaaaaataattatagatg 47922427  T
Q  212 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 311  Q
     |||||||||||||||||||||||||||||||||        |||||||| ||||||||| ||| ||| ||| |||||||||  |||||||| |||||||    
T  47922426 atgggacccacttagtggtaggacccaccatcta-ttcttttgtgtctatatctctccaaattgcaaaactcaatttattttagcaaatggagaggatct 47922328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 31862370 - 31862246
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||| |||||| |  || || |||||| ||||||||||||||| ||||||| ||||| ||  | ||| ||||| |||| |||||||||||||||||    
T  31862370 atcctctcaatttatatccttctctatttctaccatttggagagatatagacacacaaaattttagaaaaagtaaaaaataattaatgatggtgggaccc 31862271  T
Q  221 acttagtggtaggacccaccatcta 245  Q
    |||||||||||||| ||||||||||    
T  31862270 acttagtggtaggatccaccatcta 31862246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 17080791 - 17080697
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtg 214  Q
    ||||| |||||||||||||||| || |||||||| ||||||||||||||||||| ||||||||||| | ||| ||||||||||  ||||||||||    
T  17080791 gatcccctccatttatgtgtttctccatttcttcaatttggagagataaagacagataaaatcttggaaaaagtaaaatataatgaatgatggtg 17080697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 12153210 - 12153273
Alignment:
Q  254 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  12153210 gtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12153273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 12312650 - 12312572
Alignment:
Q  124 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataa 202  Q
    |||||||||||||||||| || |||||||| |||| |||||||||||||||||||||| ||||| ||| ||||||||||    
T  12312650 ctctccatttatgtgtttctccatttcttcaatttagagagataaagacacataaaattttgaaaaaagtaaaatataa 12312572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 33524321 - 33524381
Alignment:
Q  257 tctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  33524321 tctatctctctccaacttccaaatctccatttattttgccaaatggagaggatcttcaccc 33524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 25442328 - 25442200
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaa-ataaaatataactaatgatggtggg 216  Q
    |||||||||||||||||||   || || |||||||||||||||||||||||||||||| | |||  | || |||  ||||| |||| |||||  |||| |    
T  25442328 aagatcctctccatttatggccttctccatttcttccatttggagagataaagacacacacaattataaaaaaagttaaaaaataattaatgtcggtgag 25442229  T
Q  217 acccacttagtggtaggacccaccatcta 245  Q
    | ||||||||||||||||||||| |||||    
T  25442228 atccacttagtggtaggacccacaatcta 25442200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 52018822 - 52018882
Alignment:
Q  257 tctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||||||||    
T  52018822 tctatctctctccaacttgcaaaactccatttattttgctaaatggagaggatcttcaccc 52018882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 121 - 241
Target Start/End: Complemental strand, 56269217 - 56269106
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||  |          |||| |||| |||||||||||||||||    
T  56269217 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaaagta---------aaaaaataattaatgatggtgggaccc 56269127  T
Q  221 acttagtggtaggacccacca 241  Q
    |||||||||||||||||||||    
T  56269126 acttagtggtaggacccacca 56269106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 310
Target Start/End: Original strand, 1871237 - 1871388
Alignment:
Q  155 atttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnng 254  Q
    ||||||||||||||||||||| | ||  ||||| |||||| || |||| |||||||| ||||||||||||||| |||||| |||| |||||             
T  1871237 atttggagagataaagacacaaagaaatttgaa-aaaatataaaataattaatgatgatgggacccacttagtagtaggatccactatctatattttt-- 1871333  T
Q  255 tgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 310  Q
    ||||||||||||||||| ||| | | |||||||||||||| ||||| || ||||||    
T  1871334 tgtctatctctctccaaattgcata-ctccatttattttgtcaaattgagaggatc 1871388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 241
Target Start/End: Original strand, 5524372 - 5524492
Alignment:
Q  111 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    |||||| || |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||    
T  5524372 acgggtcaatatcctctccatttataaatttttccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgat 5524461  T
Q  211 ggtgggacccacttagtggtaggacccacca 241  Q
    ||||||||||||||| || ||||||||||||    
T  5524462 ggtgggacccacttactgataggacccacca 5524492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 319
Target Start/End: Original strand, 23474062 - 23474231
Alignment:
Q  147 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctan 246  Q
    |||| |||||||||||||||| | ||||| ||||  || || ||| |||||  ||| ||||||||||||||  |||| | | |||||||||||||||||     
T  23474062 tttcatccatttggagagatataaacacacaaaaaattcaaaaaattaaaaagtaattaatgatggtgggattcactcaatagtaggacccaccatcta- 23474160  T
Q  247 nnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 319  Q
           ||||||||||||| |||| ||| | | ||||||||||| ||| ||||||| |||||||| ||||||    
T  23474161 -ttttatgtgtctatctctccccaaattgcata-ctccatttattatgctaaatggagaggatctttacccca 23474231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 33841929 - 33841854
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccca 221  Q
    ||||| |||||||||| ||||||||||||| ||||||||||| | | || |  |||| ||||||||||||||||||    
T  33841929 atttcctccatttggaaagataaagacacaaaaaatcttgaaaagagtatacaataattaatgatggtgggaccca 33841854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 121 - 241
Target Start/End: Complemental strand, 37002391 - 37002281
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||||||||||||    
T  37002391 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgatggtgggaccc 37002302  T
Q  221 acttagtggtaggacccacca 241  Q
    |||||||  ||||| ||||||    
T  37002301 acttagtaataggatccacca 37002281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 48084603 - 48084555
Alignment:
Q  193 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 241  Q
    ||||| |||| ||||||||||||||||||||||||| ||| ||||||||    
T  48084603 taaaaaataattaatgatggtgggacccacttagtgctagaacccacca 48084555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 43447697 - 43447638
Alignment:
Q  155 atttggagagataaagacacat-aaaatcttgaacaaaataaaatataactaatgatggt 213  Q
    |||| ||||||||||||||||| ||||| ||||| ||| |||||||||| ||||||||||    
T  43447697 atttcgagagataaagacacataaaaattttgaaaaaagtaaaatataattaatgatggt 43447638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 238
Target Start/End: Original strand, 3326438 - 3326559
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagat-aaagacacataaaatcttgaacaaaataaaatataactaatgatggtggg 216  Q
    ||||||||||||||||||||  |  || |||||||  |||| ||||||| ||||||| | ||| | ||||| ||| ||||| |||| |||| |||||||     
T  3326438 aagatcctctccatttatgtcctcctccatttctttaattttgagagataaaagacaaaaaaagttttgaaaaaagtaaaaaataattaataatggtgga 3326537  T
Q  217 acccacttagtggtaggaccca 238  Q
    ||||| ||| ||||| ||||||    
T  3326538 acccatttaatggtatgaccca 3326559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 25219003 - 25219040
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  25219003 taatgatggtgggatccacttagtgataggacccacca 25219040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 32146510 - 32146547
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  32146510 taatgatggtgggatccacttagtgataggacccacca 32146547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 46238974 - 46239011
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  46238974 taatgatggtgggatccacttagtgataggacccacca 46239011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Original strand, 53526096 - 53526133
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  53526096 taatgatggtgggatccacttagtgataggacccacca 53526133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 55160438 - 55160401
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  55160438 taatgatggtgggatccacttagtgataggacccacca 55160401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 36688260 - 36688224
Alignment:
Q  199 ataactaatgatggtgggacccacttagtggtaggac 235  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  36688260 ataattaatgatggtgggacccacttagtgataggac 36688224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 42010114 - 42010158
Alignment:
Q  193 taaaatataactaatgatggtgggacccacttagtggtaggaccc 237  Q
    ||||| |||| |||||||||||||||||| |||||| ||||||||    
T  42010114 taaaaaataattaatgatggtgggacccatttagtgataggaccc 42010158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 56453886 - 56453850
Alignment:
Q  205 aatgatggtgggacccacttagtggtaggacccacca 241  Q
    ||||||||||||||||||||| || ||||||||||||    
T  56453886 aatgatggtgggacccacttaatgataggacccacca 56453850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 120 - 318
Target Start/End: Original strand, 207987 - 208183
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||| |||||||    
T  207987 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggacc 208086  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 318  Q
    ||||||||||||||||||||||||||        |||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  208087 cacttagtggtaggacccaccatcta--ttttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 208183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 5e-57; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 120 - 317
Target Start/End: Complemental strand, 43720098 - 43719903
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||| ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  43720098 gatcttctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaaataaaatataattaatgatggtgggacc 43719999  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    |||||||||||||||||||| || ||        |||||||||||||||||||||| ||| ||||||||||||||  ||||||| |||||||||||||    
T  43719998 cacttagtggtaggacccacaattta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgttaaatggagaggatcttcaccc 43719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 113 - 317
Target Start/End: Complemental strand, 19830591 - 19830387
Alignment:
Q  113 gggtgaagatcctctccattt-atgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgat 210  Q
    |||| |||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||||||||||| || |||  |||||||||| |||||||    
T  19830591 gggttaagatcctctccattttatgtgtttttccatttcttcaatttggagagataaagacacataaaatctttaaaaaaggtaaaatataattaatgat 19830492  T
Q  211 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 310  Q
    ||||||||||||||| |||||||||||||||||||        |||||||| |||| |||||||| ||| ||||||||||||||||||||||| ||||||    
T  19830491 ggtgggacccacttaatggtaggacccaccatcta--ttttttgtgtctatttctccccaacttgcaaaactccatttattttgccaaatggagaggatc 19830394  T
Q  311 ttcaccc 317  Q
    |||||||    
T  19830393 ttcaccc 19830387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 111 - 317
Target Start/End: Original strand, 2229898 - 2230102
Alignment:
Q  111 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    |||||| | |||||||| ||||||||||||| || |||||||  ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  2229898 acgggttaggatcctcttcatttatgtgtttctctatttctttaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgat 2229997  T
Q  211 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 310  Q
    ||||| | |||||||||||||||||||| ||||||        |||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||     
T  2229998 ggtggaaaccacttagtggtaggacccatcatcta--ttttttgtgtctatctctctccaacttgcaaaactccaattattttgccaaatggagaggatg 2230095  T
Q  311 ttcaccc 317  Q
    |||||||    
T  2230096 ttcaccc 2230102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 136 - 317
Target Start/End: Original strand, 27033591 - 27033770
Alignment:
Q  136 gtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggac 235  Q
    |||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  27033591 gtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggatccacttagtggtaggac 27033690  T
Q  236 ccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||        |||||||||||||||||||||| ||| |||||||||||||  |||||||| | |||||||||||    
T  27033691 ccaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 27033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 120 - 317
Target Start/End: Original strand, 34373755 - 34373950
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    ||||||||||||  |||||||| |  |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  34373755 gatcctctccatcaatgtgtttcttcattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 34373854  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
     | |||||||||||||||||||||||        |||||||||||||||||||||| ||| | | ||||||||||||||||||| || ||||||||||    
T  34373855 taattagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacacaatttattttgccaaatggagagaatcttcaccc 34373950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 120 - 315
Target Start/End: Original strand, 40851697 - 40851891
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatat-aactaatgatggtgggac 218  Q
    |||||||||||||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |  |||||||||| ||||    
T  40851697 gatcctctccatttatgtatttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatatgatttaatgatggtaggac 40851796  T
Q  219 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcac 315  Q
    |||||||||||| | ||||||||||||        |||||||||| ||||||||||| ||| |||||||||||||| ||||| || |||||||||||    
T  40851797 ccacttagtggttgaacccaccatcta--ttttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgagaggatcttcac 40851891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 125 - 299
Target Start/End: Complemental strand, 34373731 - 34373559
Alignment:
Q  125 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 224  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||| ||| ||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  34373731 tctccatttatgtgtttctccatttcttcaatttggagagataaagagacaaaaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 34373632  T
Q  225 agtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaa 299  Q
    |||||||||||||||||||||        |||||||||||| |  |||||| ||| ||| |||||||||||||||    
T  34373631 agtggtaggacccaccatcta--tttttagtgtctatctctatggaacttgcaaaactctatttattttgccaaa 34373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 125 - 314
Target Start/End: Original strand, 46167322 - 46167509
Alignment:
Q  125 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 224  Q
    ||||||||||||||||| || |||||||| |||| |||||||||||||| ||| ||||||||| ||| |||||||||| |||| ||||| ||| ||||||    
T  46167322 tctccatttatgtgtttttccatttcttcaatttagagagataaagacaaatataatcttgaaaaaagtaaaatataattaataatggtaggatccactt 46167421  T
Q  225 agtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 314  Q
    |||||||||||||||||| ||        |||||||||||||||||||||  ||| ||||||||||||||| ||||||| ||||| ||||    
T  46167422 agtggtaggacccaccatata--ttttttgtgtctatctctctccaacttacaaaactccatttattttgctaaatggagaggatgttca 46167509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 121 - 317
Target Start/End: Original strand, 48084744 - 48084939
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||||||||||||  || || |||||| ||||||||||||||| ||||||| ||||| ||||| ||||||||| |||| |||||||| ||||||||    
T  48084744 atcctctccatttatgtccttctccatttctaccatttggagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 48084843  T
Q  221 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    |||||||||| ||||||||||||||        ||||||||||||| |||| ||| ||| ||| |||||||||  |||||||| |||||||| ||||    
T  48084844 acttagtggttggacccaccatcta-ttcttttgtgtctatctctccccaaattgcaaaactcaatttattttagcaaatggagaggatcttaaccc 48084939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 550969 - 550842
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    |||||||||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||| || || ||| |||||||||| |||| |||||||||    
T  550969 aagatcctctccatttatgtctttctccatttcttccatttggagagataaagatacataaaatttttaaaaaagtaaaatataaataataatggtggga 550870  T
Q  218 cccacttagtggtaggacccaccatcta 245  Q
    |||||||| || ||||| ||||||||||    
T  550869 cccacttaatgataggatccaccatcta 550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 24754673 - 24754776
Alignment:
Q  212 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 311  Q
    ||||||||||||||||||||||||  ||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  24754673 gtgggacccacttagtggtaggacataccatctattttgt--gtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatct 24754770  T
Q  312 tcaccc 317  Q
    ||||||    
T  24754771 tcaccc 24754776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 24763670 - 24763773
Alignment:
Q  212 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 311  Q
    ||||||||||||||||||||||||  ||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  24763670 gtgggacccacttagtggtaggacataccatctattttgt--gtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatct 24763767  T
Q  312 tcaccc 317  Q
    ||||||    
T  24763768 tcaccc 24763773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 12402893 - 12403015
Alignment:
Q  124 ctctccatttatgtgtttat-caatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggaccca 221  Q
    |||||||||||||||||| | || ||||||  |||||||||||||||||||||||||||||| || |||| |||||||||| |||| |||||||||| ||    
T  12402893 ctctccatttatgtgtttcttcattttctta-atttggagagataaagacacataaaatcttaaaaaaaagtaaaatataattaataatggtgggactca 12402991  T
Q  222 cttagtggtaggacccaccatcta 245  Q
    ||||||||||| | ||||||||||    
T  12402992 cttagtggtagaatccaccatcta 12403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 123 - 301
Target Start/End: Complemental strand, 566925 - 566746
Alignment:
Q  123 cctctccatttatgtgtttatc----aatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggac 218  Q
    ||||| ||||||||| ||||||    ||||||||||||||||||||||||| | ||||||||||||||| ||| |||||||||| |||| | ||||||||    
T  566925 cctcttcatttatgtctttatccattaatttcttccatttggagagataaaaatacataaaatcttgaa-aaagtaaaatataaataataaaggtgggac 566827  T
Q  219 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatg 301  Q
    ||||||| || ||||| || |||| ||        || ||||||||||||||| ||| ||| |||||||||||||||||||||    
T  566826 ccacttaatgataggatccgccatata-tttttttgtatctatctctctccaaattgcaaa-ctccatttattttgccaaatg 566746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 40810505 - 40810382
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacc 219  Q
    ||||||||||||||||| ||| || ||||||  |||| ||||||||| | |||||  |||| ||||| |||| ||||| |||| |||||||| |||||||    
T  40810505 atcctctccatttatgtctttttccatttctatcattaggagagatataaacaca--aaattttgaaaaaaaataaaaaataattaatgatgatgggacc 40810408  T
Q  220 cacttagtggtaggacccaccatcta 245  Q
    |||||||||||  |||||||||||||    
T  40810407 cacttagtggttagacccaccatcta 40810382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 52859534 - 52859433
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaa-aataaaatataactaatgatggtggg 216  Q
    ||||| |||| ||||||||| ||| || |||||| ||||||||||| ||||| |||||||||||||| || || | |||||||||| ||||||| |||||    
T  52859534 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatcttaaaaaagagtaaaatataattaatgattgtggg 52859435  T
Q  217 ac 218  Q
    ||    
T  52859434 ac 52859433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 31523817 - 31523698
Alignment:
Q  112 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 211  Q
    ||||| || |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  31523817 cgggtcaatatcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 31523728  T
Q  212 gtgggacccacttagtggtaggacccacca 241  Q
    ||||||||||||||||  ||||||||||||    
T  31523727 gtgggacccacttagtaataggacccacca 31523698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 42613015 - 42613125
Alignment:
Q  121 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 220  Q
    |||||||||||||||   ||| || |||| ||| |||| |||||||||||||||||||||          | ||||| |||| |||||||||||||||||    
T  42613015 atcctctccatttataaatttctccatttgttctatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggaccc 42613104  T
Q  221 acttagtggtaggacccacca 241  Q
    |||||||| ||||||||||||    
T  42613105 acttagtgataggacccacca 42613125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 2310233 - 2310330
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    |||||| |||||||||| ||| ||||  ||||||||||||| |||||||||||||||  ||||| || || ||| ||||| |||| |||||||| |||||    
T  2310233 aagatcatctccatttacgtgcttatttatttcttccatttagagagataaagacac--aaaattttaaagaaagtaaaaaataattaatgatgatggga 2310330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 24647905 - 24647957
Alignment:
Q  265 tctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  24647905 tctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 24647957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 3009171 - 3009233
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 180  Q
    ||||||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||    
T  3009171 aagatcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 3009233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 567043 - 566988
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagaca 173  Q
    |||||||||| |||||||  || ||| |||||||| ||||||||||||||||||||    
T  567043 aagatcctcttcatttattagtctattaatttctttcatttggagagataaagaca 566988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 32577482 - 32577528
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaat 193  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  32577482 atttcttctatttggagagataaagacaca-aaaatcttgaaaaaaat 32577528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 181
Target Start/End: Complemental strand, 20485870 - 20485808
Alignment:
Q  119 agatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaat 181  Q
    ||||||||||||||||  | ||| || |||||| ||||||||||||||| | |||||||||||    
T  20485870 agatcctctccatttaaatttttctccatttctaccatttggagagatataaacacataaaat 20485808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 49289104 - 49289042
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 180  Q
    |||||| ||| ||||||||| ||| || |||| || |||||||||| ||||||||||||||||    
T  49289104 aagatcatcttcatttatgtttttctccatttgtttcatttggagaaataaagacacataaaa 49289042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 49679419 - 49679304
Alignment:
Q  112 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 211  Q
    ||||| || |||||||||||||||   ||| || |||| || ||||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  49679419 cgggtcaatatcctctccatttataaatttctccatttgtttcatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 49679330  T
Q  212 gtgggacccacttagtggtaggaccc 237  Q
    |||||||||| |||||| ||||||||    
T  49679329 gtgggacccatttagtgataggaccc 49679304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 111; Significance: 8e-56; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 115 - 317
Target Start/End: Complemental strand, 9354 - 9157
Alignment:
Q  115 gtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtg 214  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| || |||||  ||||||| |||||||||||    
T  9354 gtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaaggcacatgaaatctt-aaaaaaat--aatataattaatgatggtg 9258  T
Q  215 ggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 314  Q
    | | |||||||||||| ||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  9257 gaatccacttagtggttggacccaccatcta--ttttctgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatcttca 9160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 120 - 319
Target Start/End: Complemental strand, 16548 - 16351
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    ||||||||| |||||||||||| || |||||||| |||||||||||||||   ||||||||||||||| |||||||||||||| |||||||| |||||||    
T  16548 gatcctctcaatttatgtgtttctccatttcttcaatttggagagataaaattacataaaatcttgaaaaaaataaaatataattaatgatgatgggacc 16449  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 319  Q
    ||||||||||||||||||||||| ||        |||||||||||||||||||||| ||| |||||||||||||||| || ||| |||||||||||||||    
T  16448 cacttagtggtaggacccaccattta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgcctaacggagaggatcttcacccca 16351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 120 - 317
Target Start/End: Original strand, 7071 - 7270
Alignment:
Q  120 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 219  Q
    |||||||||||||||||||||| |  |||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||    
T  7071 gatcctctccatttatgtgtttcttcatttcttcaatttgcagagataaagacatataaaatcttgaaaaaaataaaatataattaatgatggtggaacc 7170  T
Q  220 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctcc----atttattttgccaaatggacaggatcttcac 315  Q
    |||||| | |||||||||||||||||        |||||||||||||||||||||| ||| ||||    ||||||||||||||||||| |||||||||||    
T  7171 cacttaatagtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttatttattttgccaaatggagaggatcttcac 7268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 73987 - 73889
Alignment:
Q  124 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 222  Q
    |||||||||||||||||| || |||||||| |||| |||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  73987 ctctccatttatgtgtttctccatttcttcaatttagagagataaaaacacataaaatcttgaaaaaaataaaatataattaatgatgatgggacccac 73889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 313
Target Start/End: Complemental strand, 73874 - 73817
Alignment:
Q  256 gtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttc 313  Q
    |||||||||||||||||||| ||| | |||||||||||||||||| || |||||||||    
T  73874 gtctatctctctccaacttgcaaaacaccatttattttgccaaatagagaggatcttc 73817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 13646 - 13722
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 222  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  13646 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 13722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 13737 - 13799
Alignment:
Q  255 tgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 317  Q
    ||||||||||||||||||| | ||| ||| ||||||||||||||||||| | |||||||||||    
T  13737 tgtctatctctctccaactagcaaaactctatttattttgccaaatggagaagatcttcaccc 13799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 22595 - 22468
Alignment:
Q  118 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 217  Q
    |||||| ||||||||||||| | | || ||||||| ||||| |||||||||| ||||||||||||||||| ||| |||||||||| |||| || |||| |    
T  22595 aagatcttctccatttatgtctatctccatttcttacatttagagagataaatacacataaaatcttgaaaaaagtaaaatataattaattattgtggaa 22496  T
Q  218 cccacttagtggtaggacccaccatcta 245  Q
    | ||||||||||||||| |||| |||||    
T  22495 ctcacttagtggtaggatccactatcta 22468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 147 - 245
Target Start/End: Complemental strand, 6559 - 6461
Alignment:
Q  147 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 245  Q
    ||||||| |||| |||||||||||||||||||||||||| | ||| |||||||||| |||||||||| | ||||| ||||| |||||||||||||||||    
T  6559 tttcttcaattttgagagataaagacacataaaatcttggaaaaagtaaaatataattaatgatggttgtacccatttagttgtaggacccaccatcta 6461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 17456 - 17339
Alignment:
Q  111 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 210  Q
    |||||| || |||||||||||||||   ||| |  |||| |||||||| |||||||||||||||||||||          | ||||| |||| |||||||    
T  17456 acgggtcaatatcctctccatttataaatttcttcatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgat 17367  T
Q  211 ggtgggacccacttagtggtaggaccca 238  Q
    |||||||||||||||||| |||||||||    
T  17366 ggtgggacccacttagtgataggaccca 17339  T

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Target: scaffold0664 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 241
Target Start/End: Complemental strand, 4768 - 4731
Alignment:
Q  204 taatgatggtgggacccacttagtggtaggacccacca 241  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  4768 taatgatggtgggatccacttagtgataggacccacca 4731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 5560 - 5632
Alignment:
Q  146 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggac 218  Q
    |||||||||||||||||||||||||||| | | ||  ||||| ||| || || |||| |||||||| ||||||    
T  5560 atttcttccatttggagagataaagacataaagaagtttgaaaaaagtataaaataattaatgatgatgggac 5632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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