View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7779_low_23 (Length: 311)
Name: NF7779_low_23
Description: NF7779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7779_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 107601 - 107893
Alignment:
| Q |
1 |
aatttacaagaactcacttgttattattgacacaaatcttaaacacatatatgtagaaataaccaaaacatcaatttaccaaaagagaacttgacacaat |
100 |
Q |
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| T |
107601 |
aatttacaagaactcacttgttattattgacacaaatcttaaacacatatatgtagaaataaccaaaacatcaatttaccaaaagagaacttgacacaat |
107700 |
T |
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| Q |
101 |
aaggcttacaaacttcaaattctacaaaagaaatgaaagataacaagatttaggtgattgttgttaattacctgctaatatagatgaacttccttagaaa |
200 |
Q |
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| T |
107701 |
aaggcttacaaacttcaaattctacaaaagaaatgaaagataacaagatttaggtgattgttgttaattacctgctaatatagatgaacttccttagaaa |
107800 |
T |
|
| Q |
201 |
atgctgtgaggctctctatgttagggtccttctcaaactctattgtgctaataatttagctgtgtttgtttctctaccaatgtgacattaact |
293 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
107801 |
atgctgtgaggctctctatgttagggtccttctcaaactctattgtgctaataatttagctgtgtttgtttctctaccaatgtgacattaact |
107893 |
T |
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