View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7779_low_25 (Length: 268)

Name: NF7779_low_25
Description: NF7779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7779_low_25
NF7779_low_25
[»] chr6 (24 HSPs)
chr6 (1-268)||(7513468-7513735)
chr6 (1-257)||(10617313-10617564)
chr6 (5-123)||(1747724-1747841)
chr6 (11-216)||(9593797-9593998)
chr6 (140-257)||(33084002-33084124)
chr6 (14-253)||(21870158-21870403)
chr6 (1-59)||(38908-38966)
chr6 (11-130)||(33997633-33997749)
chr6 (11-88)||(34594-34670)
chr6 (12-55)||(1681611-1681654)
chr6 (78-130)||(32913417-32913469)
chr6 (23-130)||(4948405-4948511)
chr6 (23-130)||(4955376-4955482)
chr6 (90-216)||(5258315-5258440)
chr6 (150-212)||(6641635-6641697)
chr6 (149-257)||(8364520-8364629)
chr6 (11-115)||(8364646-8364749)
chr6 (155-199)||(26291788-26291832)
chr6 (11-59)||(31831948-31831996)
chr6 (11-130)||(6906917-6907034)
chr6 (11-122)||(31818614-31818724)
chr6 (1-59)||(7080485-7080543)
chr6 (21-130)||(579493-579601)
chr6 (78-198)||(6293541-6293660)
[»] chr5 (60 HSPs)
chr5 (1-255)||(31635999-31636254)
chr5 (3-252)||(2712897-2713145)
chr5 (1-257)||(10082824-10083077)
chr5 (11-216)||(14749297-14749500)
chr5 (1-199)||(21952364-21952558)
chr5 (1-199)||(1525651-1525847)
chr5 (6-257)||(11002505-11002759)
chr5 (1-93)||(33667547-33667638)
chr5 (13-124)||(12576951-12577061)
chr5 (11-190)||(42199302-42199479)
chr5 (11-123)||(38684562-38684673)
chr5 (11-253)||(7359349-7359593)
chr5 (140-213)||(33667209-33667282)
chr5 (16-201)||(38578615-38578798)
chr5 (12-257)||(6888937-6889185)
chr5 (11-201)||(43475245-43475432)
chr5 (11-216)||(14667753-14667964)
chr5 (17-216)||(15489587-15489784)
chr5 (2-186)||(21915901-21916082)
chr5 (2-121)||(8492413-8492534)
chr5 (11-106)||(7678577-7678671)
chr5 (1-51)||(1174642-1174692)
chr5 (3-53)||(1935273-1935323)
chr5 (11-105)||(18698894-18698987)
chr5 (150-216)||(43558053-43558119)
chr5 (11-216)||(4496374-4496577)
chr5 (2-59)||(17213219-17213276)
chr5 (78-210)||(18351062-18351194)
chr5 (11-72)||(30588579-30588640)
chr5 (140-216)||(34273017-34273093)
chr5 (155-222)||(3097157-3097224)
chr5 (11-130)||(9917539-9917657)
chr5 (1-48)||(37065632-37065679)
chr5 (21-131)||(6859455-6859564)
chr5 (9-102)||(15369884-15369975)
chr5 (14-72)||(27998573-27998631)
chr5 (156-257)||(32516502-32516606)
chr5 (11-216)||(1287668-1287871)
chr5 (11-72)||(11675661-11675722)
chr5 (11-216)||(24178500-24178703)
chr5 (140-201)||(37065534-37065595)
chr5 (140-212)||(28676589-28676661)
chr5 (140-220)||(28977075-28977155)
chr5 (150-257)||(34194724-34194834)
chr5 (11-115)||(42199483-42199586)
chr5 (174-252)||(418237-418318)
chr5 (17-112)||(3775162-3775256)
chr5 (219-257)||(8492623-8492661)
chr5 (11-88)||(9235166-9235240)
chr5 (149-220)||(15168776-15168849)
chr5 (11-53)||(28186864-28186906)
chr5 (1-120)||(34734473-34734593)
chr5 (11-72)||(28014-28075)
chr5 (140-201)||(1275269-1275330)
chr5 (153-214)||(12577077-12577137)
chr5 (11-72)||(29922416-29922477)
chr5 (11-71)||(2066130-2066190)
chr5 (1-33)||(3442950-3442982)
chr5 (11-131)||(6788141-6788260)
chr5 (149-214)||(41833807-41833874)
[»] chr7 (66 HSPs)
chr7 (1-268)||(5335855-5336121)
chr7 (1-257)||(36514287-36514543)
chr7 (1-268)||(48735979-48736248)
chr7 (11-201)||(28628022-28628210)
chr7 (75-255)||(19262586-19262767)
chr7 (22-199)||(14593772-14593942)
chr7 (7-201)||(18605231-18605423)
chr7 (11-105)||(24549777-24549870)
chr7 (22-199)||(16013295-16013465)
chr7 (1-105)||(19119503-19119605)
chr7 (14-257)||(30200056-30200297)
chr7 (7-201)||(18637567-18637759)
chr7 (7-201)||(18651001-18651193)
chr7 (11-201)||(12966027-12966209)
chr7 (43-216)||(36136754-36136925)
chr7 (11-125)||(1569096-1569209)
chr7 (107-257)||(42187415-42187568)
chr7 (43-257)||(47848618-47848835)
chr7 (79-216)||(1740791-1740927)
chr7 (11-188)||(38135302-38135476)
chr7 (13-90)||(40830317-40830393)
chr7 (11-72)||(45601608-45601669)
chr7 (11-123)||(30144857-30144968)
chr7 (89-216)||(13859174-13859300)
chr7 (11-221)||(28858029-28858238)
chr7 (99-231)||(30632943-30633071)
chr7 (78-257)||(39811901-39812084)
chr7 (138-216)||(7189440-7189518)
chr7 (99-217)||(45558351-45558468)
chr7 (22-103)||(30814771-30814851)
chr7 (1-74)||(34745877-34745950)
chr7 (1-41)||(25578023-25578063)
chr7 (140-216)||(27021908-27021984)
chr7 (140-254)||(33072901-33073018)
chr7 (5-115)||(7220846-7220955)
chr7 (74-216)||(23720831-23720972)
chr7 (11-57)||(30664715-30664761)
chr7 (149-211)||(38920789-38920851)
chr7 (140-237)||(40830190-40830289)
chr7 (11-94)||(41461207-41461292)
chr7 (90-220)||(43281660-43281789)
chr7 (14-59)||(29653638-29653683)
chr7 (14-111)||(42177110-42177206)
chr7 (89-201)||(12841441-12841552)
chr7 (140-216)||(34869410-34869486)
chr7 (78-257)||(40008573-40008755)
chr7 (140-216)||(49029266-49029342)
chr7 (140-215)||(2885938-2886013)
chr7 (79-130)||(25579233-25579284)
chr7 (89-216)||(31005213-31005339)
chr7 (1-52)||(45558482-45558533)
chr7 (11-121)||(32368426-32368535)
chr7 (149-215)||(40169640-40169706)
chr7 (11-72)||(9210793-9210854)
chr7 (140-257)||(28020908-28021030)
chr7 (11-52)||(30914591-30914632)
chr7 (140-201)||(35906417-35906478)
chr7 (140-201)||(36101981-36102042)
chr7 (1-70)||(38921167-38921236)
chr7 (149-257)||(40139144-40139254)
chr7 (140-201)||(41948521-41948582)
chr7 (140-200)||(7220750-7220810)
chr7 (11-51)||(19262547-19262587)
chr7 (11-71)||(21517469-21517529)
chr7 (11-71)||(37976368-37976428)
chr7 (147-199)||(45841204-45841256)
[»] chr8 (66 HSPs)
chr8 (1-257)||(32043534-32043793)
chr8 (1-131)||(7531723-7531852)
chr8 (11-268)||(10079996-10080254)
chr8 (1-257)||(39953343-39953602)
chr8 (1-179)||(16351405-16351580)
chr8 (43-214)||(29700268-29700437)
chr8 (26-257)||(25985465-25985696)
chr8 (11-130)||(38178349-38178467)
chr8 (5-108)||(4011180-4011282)
chr8 (11-130)||(29520725-29520842)
chr8 (11-125)||(16971843-16971956)
chr8 (149-254)||(45419186-45419294)
chr8 (14-124)||(45512587-45512696)
chr8 (11-94)||(35643695-35643777)
chr8 (56-200)||(34196165-34196308)
chr8 (36-122)||(37826374-37826459)
chr8 (1-70)||(26685998-26686067)
chr8 (150-257)||(13171875-13171987)
chr8 (11-106)||(30783131-30783225)
chr8 (11-130)||(32931036-32931154)
chr8 (11-101)||(79131-79220)
chr8 (11-113)||(3079693-3079793)
chr8 (1-59)||(38901898-38901956)
chr8 (11-72)||(23023357-23023418)
chr8 (1-74)||(30812895-30812968)
chr8 (30-131)||(38409130-38409230)
chr8 (11-72)||(43733339-43733400)
chr8 (150-257)||(16705706-16705816)
chr8 (11-55)||(24399878-24399922)
chr8 (153-222)||(30456441-30456512)
chr8 (11-59)||(39967588-39967636)
chr8 (11-130)||(5908721-5908839)
chr8 (178-257)||(44681293-44681377)
chr8 (76-190)||(7046350-7046462)
chr8 (140-249)||(9695583-9695697)
chr8 (140-257)||(18474176-18474294)
chr8 (11-125)||(43904754-43904867)
chr8 (149-214)||(34196064-34196129)
chr8 (11-216)||(36565330-36565533)
chr8 (153-256)||(10824393-10824497)
chr8 (1-53)||(34196551-34196603)
chr8 (155-199)||(43732563-43732607)
chr8 (11-106)||(2216387-2216480)
chr8 (15-58)||(3645232-3645275)
chr8 (11-190)||(16917200-16917376)
chr8 (11-130)||(30198355-30198473)
chr8 (11-130)||(35362739-35362857)
chr8 (15-130)||(38391986-38392100)
chr8 (154-221)||(42493536-42493603)
chr8 (28-131)||(45331674-45331776)
chr8 (140-253)||(78988-79109)
chr8 (36-190)||(30748473-30748625)
chr8 (11-68)||(39388918-39388976)
chr8 (160-201)||(7103275-7103316)
chr8 (140-201)||(12491354-12491415)
chr8 (11-72)||(17491743-17491804)
chr8 (155-220)||(18125159-18125224)
chr8 (11-72)||(28169524-28169585)
chr8 (151-216)||(33666726-33666791)
chr8 (149-210)||(41444551-41444612)
chr8 (149-201)||(2776454-2776506)
chr8 (14-70)||(10108947-10109003)
chr8 (11-59)||(30559838-30559886)
chr8 (140-216)||(36545139-36545215)
chr8 (140-216)||(40813314-40813390)
chr8 (43-123)||(45419317-45419396)
[»] chr4 (94 HSPs)
chr4 (1-257)||(10208982-10209239)
chr4 (1-190)||(31897507-31897694)
chr4 (1-224)||(46372004-46372227)
chr4 (12-199)||(26356626-26356811)
chr4 (1-216)||(35555729-35555939)
chr4 (1-196)||(42285782-42285972)
chr4 (1-172)||(31961345-31961514)
chr4 (1-257)||(17900424-17900683)
chr4 (72-257)||(25257730-25257917)
chr4 (11-257)||(54470151-54470400)
chr4 (11-216)||(42639109-42639312)
chr4 (11-184)||(47372673-47372844)
chr4 (14-122)||(7682002-7682109)
chr4 (11-131)||(47147447-47147566)
chr4 (3-216)||(44360077-44360287)
chr4 (1-172)||(51550328-51550496)
chr4 (78-188)||(2589008-2589117)
chr4 (140-257)||(51252677-51252797)
chr4 (11-216)||(33709914-33710117)
chr4 (1-131)||(6478762-6478891)
chr4 (156-257)||(45423563-45423665)
chr4 (11-190)||(21879242-21879419)
chr4 (14-130)||(34233116-34233231)
chr4 (11-220)||(4440839-4441046)
chr4 (11-216)||(31959903-31960106)
chr4 (11-131)||(2589146-2589265)
chr4 (11-95)||(49738639-49738718)
chr4 (16-131)||(55028890-55029009)
chr4 (11-130)||(21945727-21945845)
chr4 (149-268)||(44047573-44047697)
chr4 (11-188)||(22420806-22420978)
chr4 (11-125)||(28351639-28351752)
chr4 (11-113)||(40018278-40018379)
chr4 (140-201)||(31459035-31459096)
chr4 (11-130)||(21107066-21107185)
chr4 (11-123)||(25967350-25967461)
chr4 (11-59)||(26024939-26024987)
chr4 (140-216)||(36557246-36557321)
chr4 (140-216)||(41192826-41192902)
chr4 (140-254)||(48622759-48622876)
chr4 (140-257)||(50662333-50662454)
chr4 (89-216)||(52569681-52569807)
chr4 (89-216)||(56375280-56375406)
chr4 (11-85)||(26025008-26025081)
chr4 (13-103)||(30853445-30853534)
chr4 (11-89)||(31403123-31403200)
chr4 (11-89)||(45569098-45569175)
chr4 (11-69)||(50680875-50680933)
chr4 (13-130)||(8459126-8459242)
chr4 (11-72)||(31043204-31043265)
chr4 (14-119)||(35690357-35690461)
chr4 (11-56)||(37042753-37042798)
chr4 (14-59)||(42293357-42293402)
chr4 (97-202)||(46715546-46715650)
chr4 (11-72)||(55809079-55809140)
chr4 (11-59)||(934520-934568)
chr4 (156-216)||(10775654-10775714)
chr4 (140-220)||(28236169-28236249)
chr4 (11-51)||(29182605-29182645)
chr4 (140-216)||(33191064-33191140)
chr4 (140-216)||(43433914-43433990)
chr4 (14-57)||(6843762-6843805)
chr4 (14-53)||(7544615-7544654)
chr4 (11-58)||(20047581-20047628)
chr4 (13-72)||(20999132-20999191)
chr4 (14-69)||(37488226-37488281)
chr4 (149-254)||(37773676-37773785)
chr4 (149-216)||(38570972-38571039)
chr4 (14-101)||(38903810-38903895)
chr4 (12-115)||(44667335-44667437)
chr4 (11-126)||(45204928-45205041)
chr4 (35-94)||(49987519-49987577)
chr4 (11-94)||(53540401-53540483)
chr4 (219-257)||(20105771-20105809)
chr4 (219-257)||(21106928-21106966)
chr4 (9-59)||(21214673-21214723)
chr4 (11-121)||(39708517-39708626)
chr4 (150-216)||(39754601-39754667)
chr4 (23-105)||(44860933-44861014)
chr4 (13-59)||(55771662-55771708)
chr4 (13-59)||(55835898-55835944)
chr4 (11-72)||(2557761-2557822)
chr4 (14-71)||(8599033-8599090)
chr4 (1-58)||(10775548-10775605)
chr4 (155-216)||(38266136-38266197)
chr4 (208-268)||(42037798-42037861)
chr4 (17-130)||(51009206-51009318)
chr4 (140-201)||(53707799-53707860)
chr4 (78-190)||(1380383-1380494)
chr4 (78-130)||(11389799-11389851)
chr4 (156-220)||(27450411-27450475)
chr4 (140-216)||(33227199-33227275)
chr4 (72-112)||(36557190-36557230)
chr4 (148-216)||(40018407-40018475)
[»] chr3 (67 HSPs)
chr3 (1-216)||(11581434-11581647)
chr3 (1-221)||(31454304-31454524)
chr3 (1-115)||(26990303-26990416)
chr3 (5-124)||(37351488-37351606)
chr3 (11-190)||(21200564-21200741)
chr3 (107-257)||(36820145-36820297)
chr3 (11-130)||(46431768-46431882)
chr3 (92-254)||(19736943-19737110)
chr3 (1-72)||(27893221-27893292)
chr3 (11-257)||(39600770-39601019)
chr3 (11-213)||(50960726-50960922)
chr3 (11-254)||(54128325-54128572)
chr3 (92-216)||(19757889-19758013)
chr3 (140-216)||(3987037-3987113)
chr3 (11-131)||(37598259-37598377)
chr3 (2-232)||(41087712-41087946)
chr3 (91-199)||(48953589-48953697)
chr3 (140-216)||(49503770-49503846)
chr3 (11-257)||(45289180-45289432)
chr3 (149-254)||(26490264-26490372)
chr3 (43-201)||(38430853-38431009)
chr3 (31-256)||(22902751-22902971)
chr3 (11-59)||(44443293-44443341)
chr3 (11-201)||(49841624-49841809)
chr3 (89-216)||(28245427-28245553)
chr3 (12-59)||(36820067-36820114)
chr3 (17-120)||(43254976-43255078)
chr3 (9-59)||(2340804-2340854)
chr3 (43-114)||(31261063-31261132)
chr3 (1-72)||(31453040-31453111)
chr3 (140-214)||(31453154-31453229)
chr3 (5-257)||(37227874-37228127)
chr3 (11-190)||(39235154-39235331)
chr3 (11-94)||(40982007-40982089)
chr3 (11-201)||(42510105-42510291)
chr3 (149-254)||(27917519-27917627)
chr3 (11-88)||(29475805-29475879)
chr3 (90-216)||(38060421-38060546)
chr3 (18-219)||(54365071-54365271)
chr3 (98-189)||(29374951-29375041)
chr3 (11-72)||(40116557-40116618)
chr3 (11-216)||(52138790-52138993)
chr3 (11-92)||(6988016-6988094)
chr3 (11-115)||(33755431-33755534)
chr3 (11-59)||(41452829-41452877)
chr3 (11-167)||(48508274-48508428)
chr3 (140-220)||(48734351-48734431)
chr3 (149-200)||(26388487-26388538)
chr3 (11-70)||(43308696-43308755)
chr3 (11-101)||(55244381-55244471)
chr3 (149-255)||(344936-345047)
chr3 (11-121)||(19162676-19162785)
chr3 (11-137)||(23534659-23534784)
chr3 (147-201)||(31337749-31337803)
chr3 (13-59)||(33307259-33307305)
chr3 (5-103)||(37228184-37228281)
chr3 (149-195)||(37351418-37351464)
chr3 (79-125)||(40743304-40743350)
chr3 (158-216)||(50249374-50249432)
chr3 (140-201)||(38850125-38850186)
chr3 (140-201)||(41842727-41842788)
chr3 (75-120)||(44395510-44395555)
chr3 (11-60)||(49042080-49042129)
chr3 (72-112)||(3987119-3987159)
chr3 (11-47)||(36304123-36304159)
chr3 (11-67)||(45493781-45493837)
chr3 (140-254)||(51447926-51448044)
[»] chr2 (52 HSPs)
chr2 (1-197)||(44437800-44437994)
chr2 (4-178)||(42543263-42543435)
chr2 (11-216)||(43832089-43832291)
chr2 (11-257)||(42092463-42092710)
chr2 (11-133)||(19235073-19235194)
chr2 (13-131)||(26784431-26784548)
chr2 (2-257)||(4598642-4598902)
chr2 (11-254)||(38434898-38435145)
chr2 (1-115)||(5759074-5759187)
chr2 (11-257)||(9556458-9556706)
chr2 (11-130)||(37470222-37470340)
chr2 (11-216)||(37481706-37481909)
chr2 (13-130)||(38860253-38860369)
chr2 (16-257)||(23714358-23714596)
chr2 (16-257)||(24102030-24102268)
chr2 (11-216)||(43752036-43752239)
chr2 (11-210)||(18958903-18959104)
chr2 (13-123)||(7431980-7432094)
chr2 (14-183)||(12026097-12026264)
chr2 (1-74)||(12489881-12489954)
chr2 (22-115)||(33504313-33504405)
chr2 (90-254)||(12734648-12734814)
chr2 (140-251)||(18188732-18188846)
chr2 (5-53)||(28960294-28960342)
chr2 (18-113)||(29548733-29548827)
chr2 (89-199)||(24583798-24583907)
chr2 (14-72)||(33287553-33287611)
chr2 (22-128)||(36869935-36870040)
chr2 (13-57)||(1626342-1626386)
chr2 (11-211)||(12141539-12141737)
chr2 (11-94)||(18188863-18188945)
chr2 (151-201)||(12882267-12882317)
chr2 (11-72)||(19855594-19855655)
chr2 (11-60)||(23915782-23915831)
chr2 (11-72)||(26670900-26670961)
chr2 (6-58)||(11006853-11006905)
chr2 (1-37)||(12470976-12471012)
chr2 (140-254)||(41763258-41763376)
chr2 (89-216)||(8180770-8180896)
chr2 (11-54)||(19024328-19024371)
chr2 (80-123)||(43260486-43260529)
chr2 (140-190)||(13240961-13241011)
chr2 (75-129)||(26850311-26850365)
chr2 (140-254)||(41197444-41197563)
chr2 (11-52)||(8197630-8197671)
chr2 (11-52)||(8202390-8202431)
chr2 (15-52)||(41022486-41022523)
chr2 (140-201)||(43238309-43238370)
chr2 (12-53)||(45640615-45640656)
chr2 (140-216)||(2610578-2610654)
chr2 (140-216)||(38452901-38452977)
chr2 (11-55)||(42149749-42149793)
[»] chr1 (76 HSPs)
chr1 (1-131)||(50771635-50771764)
chr1 (1-131)||(43898303-43898435)
chr1 (7-253)||(10272211-10272455)
chr1 (1-131)||(28528429-28528558)
chr1 (1-201)||(27637710-27637910)
chr1 (1-262)||(40419578-40419842)
chr1 (2-212)||(37263325-37263532)
chr1 (11-216)||(43423709-43423912)
chr1 (1-257)||(26016381-26016640)
chr1 (11-201)||(38868887-38869075)
chr1 (13-216)||(3818947-3819148)
chr1 (11-216)||(40416361-40416564)
chr1 (11-120)||(6025690-6025798)
chr1 (2-94)||(51584855-51584946)
chr1 (11-172)||(42501142-42501301)
chr1 (1-131)||(12261792-12261921)
chr1 (11-195)||(15577432-15577611)
chr1 (2-115)||(52442608-52442720)
chr1 (2-74)||(7083020-7083092)
chr1 (75-257)||(14225981-14226165)
chr1 (11-130)||(33560947-33561065)
chr1 (11-125)||(44008659-44008772)
chr1 (89-254)||(51602005-51602172)
chr1 (43-216)||(2544589-2544759)
chr1 (11-120)||(30834066-30834174)
chr1 (7-71)||(19969297-19969361)
chr1 (11-94)||(853874-853956)
chr1 (14-254)||(9599486-9599729)
chr1 (14-199)||(32404618-32404801)
chr1 (45-201)||(5338729-5338883)
chr1 (11-71)||(8203223-8203283)
chr1 (11-254)||(8671867-8672111)
chr1 (11-59)||(46388521-46388569)
chr1 (11-59)||(46394965-46395013)
chr1 (78-137)||(17640208-17640267)
chr1 (11-94)||(30396818-30396900)
chr1 (140-250)||(9509269-9509384)
chr1 (14-120)||(17815564-17815669)
chr1 (87-181)||(29807891-29807984)
chr1 (11-124)||(50806750-50806860)
chr1 (11-216)||(1210735-1210938)
chr1 (11-72)||(8342970-8343031)
chr1 (11-124)||(8796290-8796402)
chr1 (76-125)||(52160389-52160438)
chr1 (75-167)||(10569219-10569310)
chr1 (11-252)||(12231315-12231558)
chr1 (82-190)||(23791803-23791910)
chr1 (152-220)||(37463101-37463169)
chr1 (79-190)||(18793144-18793254)
chr1 (89-216)||(34792515-34792641)
chr1 (90-216)||(27847972-27848097)
chr1 (149-257)||(17815419-17815529)
chr1 (155-219)||(13827948-13828012)
chr1 (11-59)||(30445256-30445304)
chr1 (17-197)||(48431501-48431679)
chr1 (137-257)||(51812469-51812594)
chr1 (149-216)||(22090086-22090153)
chr1 (11-122)||(52561678-52561788)
chr1 (1-103)||(6641213-6641314)
chr1 (73-195)||(39422193-39422313)
chr1 (156-254)||(52561843-52561946)
chr1 (14-55)||(6299485-6299526)
chr1 (11-56)||(8676954-8676999)
chr1 (174-254)||(18469332-18469415)
chr1 (11-72)||(29577231-29577292)
chr1 (85-118)||(32107731-32107764)
chr1 (14-59)||(51812654-51812699)
chr1 (11-59)||(990547-990595)
chr1 (140-216)||(1661420-1661496)
chr1 (2-54)||(3662515-3662567)
chr1 (11-59)||(7921982-7922030)
chr1 (140-216)||(32231170-32231246)
chr1 (140-216)||(39140510-39140586)
chr1 (70-130)||(43375734-43375794)
chr1 (48-112)||(49377417-49377480)
chr1 (140-216)||(51440981-51441057)
[»] scaffold0325 (1 HSPs)
scaffold0325 (15-201)||(11803-11986)
[»] scaffold0018 (3 HSPs)
scaffold0018 (72-214)||(44017-44158)
scaffold0018 (11-125)||(178509-178622)
scaffold0018 (140-216)||(31458-31534)
[»] scaffold0570 (1 HSPs)
scaffold0570 (11-220)||(1037-1244)
[»] scaffold0373 (1 HSPs)
scaffold0373 (14-57)||(2393-2436)
[»] scaffold0021 (1 HSPs)
scaffold0021 (150-199)||(101001-101050)
[»] scaffold0003 (1 HSPs)
scaffold0003 (19-167)||(346870-347016)


Alignment Details
Target: chr6 (Bit Score: 236; Significance: 1e-130; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 7513468 - 7513735
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7513468 catgtctttctccaactcattcatctctagatccttcctaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 7513567  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
     |||| ||  ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7513568 aatctgattgactcttcttactacataatccacgggtttttctctttgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 7513667  T
Q  201 tccccgaactctctctaatgtcatttctaattatatcgcgtctagtcttaccacacactcaaggcaac 268  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7513668 tccccgaactctctctaatgtcatttctaattatatcgcgtctagtcttaccacacactcaaggcaac 7513735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 10617313 - 10617564
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| || |||| || |  || |||||||||||||||||||||||    
T  10617313 catgtctttctccaactcattaatctctagatccttcttaatggtttctcttatagtttttctaggt-tttcttctacctctagtgatttgactcccctc 10617411  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    ||| | |  |||||| |||| | || || || | || | |||| | | ||||| |||||||||||||||||| ||||| | ||||||||| |||| ||||    
T  10617412 catttga--tactctccttaatgcagaaaccacagg-tcttctttctacatgctcaaaccacctaagtctagtttcta-cgtcttttctactataagtgc 10617507  T
Q  201 tccccgaactctctctaatgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    | ||| ||||||| ||  |||||||||||||| |||  |||||||||||| ||||||    
T  10617508 taccccaactctcgctcttgtcatttctaattctatttcgtctagtcttaacacaca 10617564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 1747724 - 1747841
Alignment:
Q  5 tctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatc 104  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||| |||| || ||||||| || ||||||||||  |||||||| |||||||||    
T  1747724 tctttatccaactcattaatctctagatccttcttaccagtttctcttatggtttttctaggtctt-cctctgcctctagaaatttgactaccctccatc 1747822  T
Q  105 taatctactcttcttacta 123  Q
    ||| | ||||| |||||||    
T  1747823 taagccactctccttacta 1747841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 9593797 - 9593998
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||||||  || ||| ||| ||||||||||||| ||| || ||||||||| | | |||||  ||||||||||| ||||||||| ||||    
T  9593797 tccaactcattaatctctaagtctttcctaatagtttctcttataatttttctaggtcttcctc-tacctct--tgatttgactctcctccatctgatct 9593893  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    |||||||||||||||  |||  |  | | |||||| | ||||||||||||||||||| |||  ||||||||||||||||| ||  |||||| ||| ||||    
T  9593894 actcttcttactacagcatctacatg-tcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactaatggtgctaccccaact 9593992  T
Q  211 ctctct 216  Q
    | ||||    
T  9593993 ccctct 9593998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 33084124 - 33084002
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct--aat---gtcatttctaattat 234  Q
    |||||| | ||| |||||||||||||||||||| |||||||||||||||||  ||||||||| ||| ||||||||||  |||   ||||||||||||| |    
T  33084124 ttctctctacattcccaaaccacctaagtctagtttctaccatcttttctaccataggtgctaccccaactctctctctaatatcgtcatttctaattct 33084025  T
Q  235 atcgcgtctagtcttaccacaca 257  Q
    ||| | |||||||||||||||||    
T  33084024 atcccatctagtcttaccacaca 33084002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 253
Target Start/End: Original strand, 21870158 - 21870403
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttat--ccaggtcttccccctgcctctagtgatttgactcccctccatctaatcta 111  Q
    |||||||||||||||||||||||   || ||||||||  ||||||| |  | ||||||||| | ||||| ||||||||||||| | |||||||| |||||    
T  21870158 aactcattaatctctagatcctt---aatagtttctcagatagtttttttctaggtcttcctc-tgcctttagtgatttgactactctccatcttatcta 21870253  T
Q  112 ctcttcttactacataatccgcgggtttt-tctcta--tgc----atgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccc 204  Q
    |||| ||||||||| ||||  | ||| || ||||||  |||    |||||||||||||||||| | || ||||||||||||||||| || ||||||| ||    
T  21870254 ctctccttactacaaaatctacaggtcttctctctaaatgcctaaatgcccaaaccacctaagccgagtttctaccatcttttctactacaggtgctacc 21870353  T
Q  205 cgaactctct-ctaatgtcatttctaattatatcgcgtctagtcttacca 253  Q
    | ||||||||  || || ||||||||||| ||||  |||||||| |||||    
T  21870354 ccaactctctaatattgacatttctaattctatcatgtctagtcatacca 21870403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38966 - 38908
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  38966 catgtctttctccaactcatttatctctagatccttcctaatagtttctcttatagttt 38908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 33997633 - 33997749
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||    ||||||| |||||||||||||||||  | ||||||||| | ||||||||||| ||||||| |||||||||||  ||    
T  33997633 tccaactcattaatctctaggcttttcttaatagtttctcttatagttttccaaggtcttcctc-tgcctctagtgttttgactaccctccatctagcct 33997731  T
Q  111 actcttcttactacataatc 130  Q
    ||||  ||||||||| ||||    
T  33997732 actc--cttactacaaaatc 33997749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 34594 - 34670
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgat 88  Q
    |||||||||||||||| |||||| |||||||  |||||||||||||||| || ||||||| || ||||||||||||||    
T  34594 tccaactcattaatctttagatctttcttaatggtttctcttatagtttttctaggtctt-cctctgcctctagtgat 34670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 1681611 - 1681654
Alignment:
Q  12 ccaactcattaatctctagatccttcttaaaagtttctcttata 55  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  1681611 ccaactcattaatctctagatccttcttaatagtttctcttata 1681654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 32913417 - 32913469
Alignment:
Q  78 cctctagtgatttgactcccctccatctaatctactcttcttactacataatc 130  Q
    ||||||||||||||||| ||||||||||||| |||||| ||| ||||||||||    
T  32913417 cctctagtgatttgactaccctccatctaatatactctccttgctacataatc 32913469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 4948405 - 4948511
Alignment:
Q  23 atctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttact 122  Q
    ||||||||||| |||| || ||||| |||| |||||| |  ||||||||| | | ||||||||| |||||||  | ||||||| ||||||||| ||||||    
T  4948405 atctctagatctttctcaatagtttttcttttagtttttgtaggtcttcctc-tacctctagtggtttgactatcttccatctgatctactctccttact 4948503  T
Q  123 acataatc 130  Q
    ||||||||    
T  4948504 acataatc 4948511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 130
Target Start/End: Original strand, 4955376 - 4955482
Alignment:
Q  23 atctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttact 122  Q
    ||||||||||| |||| || ||||| |||| |||||| |  ||||||||| | | ||||||||| |||||||  | ||||||| ||||||||| ||||||    
T  4955376 atctctagatctttctcaatagtttttcttttagtttttgtaggtcttcctc-tacctctagtggtttgactatcttccatctgatctactctccttact 4955474  T
Q  123 acataatc 130  Q
    ||||||||    
T  4955475 acataatc 4955482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 216
Target Start/End: Original strand, 5258315 - 5258440
Alignment:
Q  90 tgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttct 189  Q
    |||||| ||||||| | ||||||||||||||| ||  ||||  |||| | |||||| | |||| |||||||| ||||| |||  |||||||| |||||||    
T  5258315 tgactctcctccatttgatctactcttcttacaacggaatctacggg-tcttctctctacatgtccaaaccatctaagcctattttctaccaacttttct 5258413  T
Q  190 attataggtgctccccgaactctctct 216  Q
    | |||||||||| |||  |||||||||    
T  5258414 actataggtgctacccccactctctct 5258440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 6641635 - 6641697
Alignment:
Q  150 atgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactct 212  Q
    |||||||||| ||| |||||||| ||||||||||||||||| |||||||| | ||| ||||||    
T  6641635 atgcccaaacaacccaagtctagtttctaccatcttttctactataggtgataccccaactct 6641697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 8364629 - 8364520
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctct-ctaatgtcatttctaattatatcgcgtctagtc 247  Q
    ||||||||||||||||||| |||  ||| |||| |||||||| ||||| |||| | | |||| |||  || |||||||||||||  |||| | |||||||    
T  8364629 catgcccaaaccacctaagcctattttcaaccaccttttctactatagttgctactccaactgtctaatattgtcatttctaatcctatcccatctagtc 8364530  T
Q  248 ttaccacaca 257  Q
    ||||||||||    
T  8364529 ttaccacaca 8364520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 8364749 - 8364646
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||| |||||| |||| ||| ||||||| ||||||||||||||||| |  ||||||| |  || ||||||||||| ||||   ||||||||| ||||    
T  8364749 tccaacttattaatttctaaatctttcttaatagtttctcttatagtttttttaggtctt-catcttcctctagtgatctgacaatcctccatctgatct 8364651  T
Q  111 actct 115  Q
    |||||    
T  8364650 actct 8364646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 26291832 - 26291788
Alignment:
Q  155 caaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||    
T  26291832 caaaccacctaagtctattttctaccatattttctattataggtg 26291788  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 31831948 - 31831996
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||| ||||||||||||| ||||||| ||||||||| |||||||    
T  31831948 tccaactcagtaatctctagatctttcttaatagtttctctgatagttt 31831996  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 6906917 - 6907034
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||| ||||| |||||||| ||||||| ||| ||| |||||| || || || |||||  | | ||||| ||||||||||| |||| ||||| ||||    
T  6906917 tccaactcgttaatatctagatctttcttaatagtctct-ttatagcttttcaagatcttcatc-tacctctcgtgatttgactaccctgcatctgatct 6907014  T
Q  111 actcttcttactacataatc 130  Q
    ||||| ||||||||| ||||    
T  6907015 actctccttactacaaaatc 6907034  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 31818724 - 31818614
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||| | | | ||| ||| ||||||||||||||||| || ||||||| | ||| ||| ||||||| | ||| |||||||| | ||||    
T  31818724 tccaactcattaatctccaaacctttcctaatagtttctcttatagtttttctaggtctt-ctcctacctttagtgatctcactaccctccatatgatct 31818626  T
Q  111 actcttcttact 122  Q
    ||| | ||||||    
T  31818625 actttccttact 31818614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7080543 - 7080485
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||| ||||||| | |||||||||| |||||| ||||| | |||||||||||||||||    
T  7080543 catgtatttctccgattcattaatctttagatctttcttgatagtttctcttatagttt 7080485  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 579601 - 579493
Alignment:
Q  21 taatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttctta 120  Q
    |||| |||| ||| ||||||| ||||||||||| ||||| |  ||||||| | | |||||||||||||  ||||  ||||||||| ||| ||||| ||||    
T  579601 taatttctatatctttcttaatagtttctcttacagttttttgaggtctttctc-tgcctctagtgatcagactatcctccatctgatcaactctcctta 579503  T
Q  121 ctacataatc 130  Q
    ||| ||||||    
T  579502 ctatataatc 579493  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 198
Target Start/End: Original strand, 6293541 - 6293660
Alignment:
Q  78 cctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttct 177  Q
    |||||||||||||||||  ||| ||||| || |||||| |||| |||||||||  | || | |||||| | |||||||||||||||| |  |||| |||     
T  6293541 cctctagtgatttgactatccttcatctgatttactctccttattacataatctacagg-tgttctctctacatgcccaaaccacctgaacctagtttcc 6293639  T
Q  178 accatcttttctattataggt 198  Q
    ||||| |||| || |||||||    
T  6293640 accatattttgtactataggt 6293660  T

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Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 31635999 - 31636254
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||| ||||||||||||||| ||||||| ||||||||| | ||||||||| ||||||| || || |||||||| |  |||||||||||||||||||| |    
T  31635999 catgtgtttctccaactcattgatctctatatccttcttgatagtttctctaatagtttttctagatcttcccc-tatctctagtgatttgactccccac 31636097  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    ||||||||||||||| |||||||||  |||| ||||| || |||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  31636098 catctaatctactctccttactacaacatccacgggtctt-ctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgc 31636196  T
Q  201 tccccgaactctctctaa---tgtcatttctaattatatcgcgtctagtcttaccaca 255  Q
    | ||| |||| |||||||   |||||||| ||||| ||||  ||||||||||||||||    
T  31636197 taccccaactttctctaatgctgtcatttataattctatccagtctagtcttaccaca 31636254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 252
Target Start/End: Complemental strand, 2713145 - 2712897
Alignment:
Q  3 tgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctcca 102  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||||| |||||| ||||||||||||||||| ||||||    
T  2713145 tgtctttctccaactcattcatctctagatccttcttaatagtttctcttatagtttttctaggtctt-cccctgactctagtgatttgactctcctcca 2713047  T
Q  103 tctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctc 202  Q
    ||| ||||||||| |||  |||| ||||| | || | |||||| | ||||||||||||||||||||||||  |||||||||||||  | ||||||||||     
T  2713046 tctgatctactctccttcatacagaatccacagg-tcttctctctacatgcccaaaccacctaagtctagtctctaccatcttttagactataggtgcta 2712948  T
Q  203 cccgaactctct-ctaatgtcatttctaattatatcgcgtctagtcttacc 252  Q
    ||| ||||||||  |  |||||||||||||| || | ||||||||||||||    
T  2712947 ccccaactctctgatgttgtcatttctaattctaccccgtctagtcttacc 2712897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 10082824 - 10083077
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||| || |||||||  ||||  |||| |||||||||||||||||    
T  10082824 catgtctttctccaactcattaatctctagatccttgttactagtttctcttatagtttttctaggtctt-accctatctctggtgatttgactcccctc 10082922  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
          |||||||||  |||||||| ||||| |  | | |||||| | |||||| ||||||| ||||||||| ||||||||||||||||| ||||||||     
T  10082923 ------atctactctctttactacagaatccacaag-tcttctctctacatgccgaaaccacttaagtctagtttctaccatcttttctactataggtga 10083015  T
Q  201 tccccgaa--ctctctctaatg---tcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    | ||| ||  ||||| ||||||   |||||||||||| |||| |||||||||||||||||||    
T  10083016 taccccaatgctctccctaatgttctcatttctaattctatcccgtctagtcttaccacaca 10083077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 14749500 - 14749297
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||| || ||||||| || |||||| |||||||||||||||||||||||| |||     
T  14749500 tccaactcgttaatctctagatccttcttgatagtttctcttatagtttttctaggtctt-cctctgcctttagtgatttgactcccctccatctgatcg 14749402  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||| ||||| ||| ||||| | || | |||||| | |||| |||||||| |||||||||| ||||||||  ||||||| |||||||||| | | ||||    
T  14749401 actctccttacaacagaatccacagg-tcttctctctacatgtccaaaccatctaagtctagtttctaccaatttttctactataggtgctacaccaact 14749303  T
Q  211 ctctct 216  Q
    ||||||    
T  14749302 ctctct 14749297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 21952558 - 21952364
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||  ||||||| || ||||||| ||||| |||||||||||||||||||||||    
T  21952558 catgtctttctccaacccattaatctctagatccttctcaatagtttctc--atagtttttctaggtctt-cccctacctctagtgatttgactcccctc 21952462  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    ||||| ||||| ||| ||||||| | ||||| | ||   |||||| | |||| ||||||||||| ||||||| |||| |||||||||||| ||||||||    
T  21952461 catctgatctattctccttactatagaatccacagg-acttctctctacatgtccaaaccacctgagtctagtttctgccatcttttctactataggtg 21952364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 1525847 - 1525651
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| |||||| |||||||| ||| |||||||||| |||||| || ||||| | ||||| ||||||||||| |||||| ||||    
T  1525847 catgtctttctccaactcatttatctctggatccttcctaatagtttctcttgtagtttttctaggtc-tacccctacctctagtgatctgactctcctc 1525749  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    ||||| ||||||||| || ||| || ||| | |||| | |||||| | |||| |||| |||||||||||||| |||||||||||||||||  |||||||    
T  1525748 catctgatctactctcctaactgcagaattcacggg-tcttctctctacatgtccaagccacctaagtctagtttctaccatcttttctacaataggtg 1525651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 6 - 257
Target Start/End: Original strand, 11002505 - 11002759
Alignment:
Q  6 ctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatct 105  Q
    |||||||||||||||| ||||||||||| ||  ||| ||||| ||||||||||| || |||||| ||||   ||||||||||| |||||||||| |||||    
T  11002505 ctttctccaactcatttatctctagatcgttactaatagtttgtcttatagtttttctaggtctaccccaa-cctctagtgatctgactcccctacatct 11002603  T
Q  106 aatctactcttctta--ctacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctcc 203  Q
     ||||||||  || |  ||||| | ||| | | | || ||   | |||||||||||||||||||||||| ||||||||| ||||||| | |||||||| |    
T  11002604 gatctactcccctaaaactacagagtccacagatctt-ctacctacatgcccaaaccacctaagtctagtttctaccatgttttctactgtaggtgctac 11002702  T
Q  204 ccgaactctctctaa---tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    |||||||||||||||   |||||||||||||| |||| | ||| |||||||||||||    
T  11002703 ccgaactctctctaatgttgtcatttctaattctatcccatctcgtcttaccacaca 11002759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 33667638 - 33667547
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgac 93  Q
    ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||| || ||||||| ||||| | ||||||||||||||    
T  33667638 catgtctttctccaactcattaatctctagatccttcttaataacttctcttatagtttttctaggtctt-cccctacatctagtgatttgac 33667547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 124
Target Start/End: Original strand, 12576951 - 12577061
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctac 112  Q
    ||||||||||||||||||||| ||||||| ||||| |||| |||||| || ||||||| || ||||||||||||||  |||| |||||||||| ||||||    
T  12576951 caactcattaatctctagatctttcttaatagtttatcttgtagtttttctaggtctt-cctctgcctctagtgataggactaccctccatctgatctac 12577049  T
Q  113 tcttcttactac 124  Q
    ||| ||||||||    
T  12577050 tctccttactac 12577061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 42199479 - 42199302
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||| |||||||| |||| || ||||| ||| ||||||| || |||||||  | || || |||||||||||||| | |||||| | ||||    
T  42199479 tccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctt-tctctccccctagtgatttgactactctccatgtgatct 42199381  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttcta 190  Q
    ||||| ||||||||| ||||  |  | | |||||| | |||||||||||||||||||||||| ||| |||||||||||||    
T  42199380 actctccttactacagaatctacatg-tcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttcta 42199302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 38684673 - 38684562
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||| ||||||||||||||| |||||||||||||||||| |||||| || |||||||||   | | |||||||||| || ||||||||||||||| |    
T  38684673 tccaactaattaatctctagatctttcttaaaagtttctcttgtagtttttctaggtcttcctt-tacatctagtgattggaatcccctccatctaatat 38684575  T
Q  111 actcttcttacta 123  Q
    ||||| |||||||    
T  38684574 actctccttacta 38684562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 7359349 - 7359593
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||| ||||||||||||||  |||| || |||||||||||| |||| || ||| ||| || |||||||||||||| |||||  ||||||||| ||||    
T  7359349 tccaacttattaatctctagatttttctaaatagtttctcttatggtttttctagg-ctttcctctgcctctagtgatatgactatcctccatctgatct 7359447  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||| ||||||||| ||||  |    | |||||| | |||| |||||||||||||  |||  ||| ||||| ||||||| |||||||| | || |||||    
T  7359448 actctccttactacagaatctac-atatcttctctctacatg-ccaaaccacctaaacctattttccaccatattttctactataggtgttacctgaact 7359545  T
Q  211 ctctct-----aatgtcatttctaattatatcgcgtctagtcttacca 253  Q
    ||||||     | |||||||||||||| |||| |||| ||||||||||    
T  7359546 ctctctctaacattgtcatttctaattctatctcgtccagtcttacca 7359593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 33667282 - 33667209
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctc 213  Q
    |||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||    
T  33667282 ttctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgctaccccaactctc 33667209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 38578615 - 38578798
Alignment:
Q  16 ctcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactct 115  Q
    |||||| || |||||||||||| ||| |||||||||| |||||| || ||||| | ||||| | |||||||||||||||| |||| |||| ||||| |||    
T  38578615 ctcatttatttctagatccttcataatagtttctcttgtagtttttctaggtc-tacccctacatctagtgatttgactctcctcgatctgatctaatct 38578713  T
Q  116 tcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
     || |||| ||||||  |  | | |||||| | ||||| |||||||||||||| ||| |||||||||||||| || || |||||||    
T  38578714 gctaactatataatctacatg-tcttctctttacatgctcaaaccacctaagtttagtttctaccatcttttataatagaggtgct 38578798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 257
Target Start/End: Complemental strand, 6889185 - 6888937
Alignment:
Q  12 ccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatcta 111  Q
    |||||| ||||||||||| ||| ||| ||| ||||||||||||||||| || ||| ||| || || |||| |||| |||||||  |||||||||||| ||    
T  6889185 ccaactaattaatctctaaatctttcctaatagtttctcttatagtttttctaggcctt-cctcttcctcaagtggtttgactatcctccatctaattta 6889087  T
Q  112 ctcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactc 211  Q
     | | ||||| ||||||||| |  | | |||||| | |||| ||||||||| |||| |||  ||| |||||||||||   |||| ||||| ||| |||||    
T  6889086 ttgtccttaccacataatccacaag-tcttctctctacatgtccaaaccacttaagcctattttccaccatcttttcctctatacgtgctaccccaactc 6888988  T
Q  212 tctc-----taatgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    | ||     || ||||||||||||| ||||| | |||||||||||||||||    
T  6888987 tttctgtaatattgtcatttctaatcatatctcatctagtcttaccacaca 6888937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 43475432 - 43475245
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||||| |||| ||||||| ||||||||||| ||||| || | || || |   | ||| ||||||| |||||  ||||||||| ||||    
T  43475432 tccaactcattaatctctggatctttcttaatagtttctctta-agtttttctatgt-ttactttttcctatagtgatctgactatcctccatctgatct 43475335  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||| |||||||||  |||  | ||| || |||| || || ||||||||||||||| |||| ||| ||||||||||||| ||||||||||    
T  43475334 actctccttactacaacatctacaggtctt-ctctctgaatacccaaaccacctaagcctagtttccaccatcttttctactataggtgct 43475245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 14667964 - 14667753
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||||| ||||||  || |||||||||||||| || |||  || || |||||||||||||| | |||    ||||||| ||||    
T  14667964 tccaactcattaatctctagatctttcttagtagcttctcttatagtttttctagg-atttccgctgcctctagtgatataactataatccatctgatct 14667866  T
Q  111 actcttcttactacataatccgcgggt-ttttctct--atgc----atgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctcc 203  Q
    ||||| |||||||||||||   |  || || |||||  ||||    |  |||||||||||||||||||  ||| ||||||||||||| |||||||||| |    
T  14667865 actctccttactacataatgtacatgtcttctctctacatgcccaaagccccaaaccacctaagtctattttccaccatcttttctactataggtgctac 14667766  T
Q  204 ccgaactctctct 216  Q
    || ||||||||||    
T  14667765 cccaactctctct 14667753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 216
Target Start/End: Original strand, 15489587 - 15489784
Alignment:
Q  17 tcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactctt 116  Q
    |||||||||| ||  || ||||||| |||||||||||| |||| || ||||||||| | ||||||||||||||  |||  |||||||||||||||||||     
T  15489587 tcattaatctataagtctttcttaatagtttctcttattgtttttctaggtcttcctc-tgcctctagtgattcaactatcctccatctaatctactctc 15489685  T
Q  117 cttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||| |||| ||||  |    | |||||| | ||||||||||||| |||||   || ||| |||||||||||||  |||||| || ||| ||||||||||    
T  15489686 cttaatacaaaatctac-aaatcttctctctacatgcccaaaccatctaagctgagtttcaaccatcttttctacaataggtactaccccaactctctct 15489784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 21916082 - 21915901
Alignment:
Q  2 atgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctcc 101  Q
    |||| ||||||||||||||| ||||||||||||||| |||  ||||||||||| |||| ||   ||||   ||||  |||||||||| ||||| ||||||    
T  21916082 atgtatttctccaactcatttatctctagatccttcctaattgtttctcttatcgtttttctgtgtct--accctatctctagtgatctgacttccctcc 21915985  T
Q  102 atctaatctactcttcttactacataatccgcgggt-ttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttt 186  Q
    || | ||||||||| || |||| ||||| | |  || |||||||||  |||||  ||||||||||||||||| ||||| |||||||    
T  21915984 atatgatctactctcctaactaaataatacacaagtcttttctcta--catgcttaaaccacctaagtctagtttctatcatcttt 21915901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 8492413 - 8492534
Alignment:
Q  2 atgtctttctccaactcattaatctctagatccttcttaa---aagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccc 98  Q
    ||||||||| | ||||||||||||||||||||||||||||    |||||| |||||||||| || || | || | ||| |||| |||||||| |||| ||    
T  8492413 atgtctttcactaactcattaatctctagatccttcttaatactagtttcccttatagtttttctagct-tttctcctacctcaagtgatttaactcacc 8492511  T
Q  99 tccatctaatctactcttcttac 121  Q
    ||||| ||||||||||| |||||    
T  8492512 tccatttaatctactctccttac 8492534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 7678671 - 7678577
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatcta 106  Q
    ||||||||||||||||||||||| |||| || |||||||||||| ||||  | || |||| || |||||||||||||| |||||  ||||||||||    
T  7678671 tccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatctt-cctctgcctctagtgatctgactatcctccatcta 7678577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1174692 - 1174642
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctct 51  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||||||    
T  1174692 catgtctttctcaaactcattaatctctagatccttcttaatagattctct 1174642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 1935323 - 1935273
Alignment:
Q  3 tgtctttctccaactcattaatctctagatccttcttaaaagtttctctta 53  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||||||||    
T  1935323 tgtctttctccaactcatttatctctagatccttcctaatagtttctctta 1935273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 18698987 - 18698894
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatct 105  Q
    ||||||||| ||||||||||||| ||||| | |  |||||||||||||| || |||| || || |||||||||||||||||||| | ||||||||    
T  18698987 tccaactcactaatctctagatctttcttgatacattctcttatagtttttctaggtatt-cctctgcctctagtgatttgactactctccatct 18698894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 43558053 - 43558119
Alignment:
Q  150 atgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    ||||||||||||||||||  ||| ||| ||||||||||||||||||| |||| ||| ||||||||||    
T  43558053 atgcccaaaccacctaagcttagtttccaccatcttttctattatagatgctaccctaactctctct 43558119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 4496577 - 4496374
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||||||  |||  |||||||| |||||||  | ||||||||| | | |||||  | | ||||||| ||||||| | ||||    
T  4496577 tccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctc-tacctcttttaacttgactctcctccatttgatct 4496479  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||||||||| ||   |||  ||||| || |||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||    
T  4496478 actcttcttaccacggcatctacgggtctt-ctctctacatgcccaaaccatctaagcctattttctaccagcttttctactataggtgctacccccact 4496380  T
Q  211 ctctct 216  Q
    ||||||    
T  4496379 ctctct 4496374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 17213276 - 17213219
Alignment:
Q  2 atgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||| |||| ||||||    
T  17213276 atgtctttctctaactcattaatctctagatccttgttaatagtttttcttctagttt 17213219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 210
Target Start/End: Original strand, 18351062 - 18351194
Alignment:
Q  78 cctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgca-tgcccaaaccacctaagtctaggttc 176  Q
    ||||||||||||||| | |||||| | | ||||||||| |||| | |||||||  | ||| || |||| | || ||||||||||||||||| |||| |||    
T  18351062 cctctagtgatttgattaccctccttttgatctactctccttattgcataatctacaggtctt-ctctctacaatgcccaaaccacctaagcctagtttc 18351160  T
Q  177 taccatcttttctattataggtgctccccgaact 210  Q
    |||||| ||||||| |||||||||| ||| ||||    
T  18351161 taccatattttctactataggtgctaccccaact 18351194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 30588640 - 30588579
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||| ||||||||||| ||||||| | ||||||||||||||| || |||||||||    
T  30588640 tccaactcattcatctctagatctttcttaacaatttctcttatagtttttctaggtcttcc 30588579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 34273093 - 34273017
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| ||||||||||||||||||| |||  |||||||||    
T  34273093 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctattataggtgctacccccactctctct 34273017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 3097224 - 3097157
Alignment:
Q  155 caaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaatgtc 222  Q
    ||||| |||||||||||| ||||| ||||||||||| |||||||| | ||| |||||||| |||||||    
T  3097224 caaacaacctaagtctagtttctagcatcttttctaatataggtgttaccccaactctctataatgtc 3097157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 9917539 - 9917657
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| ||||||| ||| |||| || ||||||||| ||||||| || ||||| | || ||| |||| |||||||||||  ||||||||| |||     
T  9917539 tccaactcattgatctctatatctttctaaatagtttctctaatagtttttctaggtcat-cctctgtctcttgtgatttgactatcctccatctgatcg 9917637  T
Q  111 actcttcttactacataatc 130  Q
    |||||  |||||||| ||||    
T  9917638 actctctttactacaaaatc 9917657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37065679 - 37065632
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttc 48  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  37065679 catgtctttctccaactcatttatctctagatccttcctaatagtttc 37065632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 6859564 - 6859455
Alignment:
Q  21 taatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttctta 120  Q
    |||||| || ||| ||| ||| ||||||||||||||||| || ||||||| || || ||||||||| |||||||  |||||||||||| || ||  ||||    
T  6859564 taatctgtaaatctttcctaatagtttctcttatagtttttctaggtctt-cctcttcctctagtggtttgactatcctccatctaatttattcccctta 6859466  T
Q  121 ctacataatcc 131  Q
    ||||| |||||    
T  6859465 ctacagaatcc 6859455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 15369884 - 15369975
Alignment:
Q  9 tctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctcca 102  Q
    ||||||||||||| |||| |||||  ||||||| ||||||||||||| ||| || ||||||   || | ||||||||||| |||||||||||||    
T  15369884 tctccaactcatttatctttagatttttcttaatagtttctcttatactttttctaggtct--accatacctctagtgatatgactcccctcca 15369975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 27998631 - 27998573
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||| |||||| ||||||  ||||||||||||||||| || |||||||||    
T  27998631 aactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcc 27998573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 32516606 - 32516502
Alignment:
Q  156 aaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattatatcgcgtctagtcttacc 252  Q
    |||||||||||| |||  ||| ||||||||||||| |||| ||| | | | ||||||||||||   |||||||||||| | ||||  |||||||||||||    
T  32516606 aaaccacctaagcctattttccaccatcttttctactataagtgttactccaactctctctaatgttgtcatttctaagtctatcctgtctagtcttacc 32516507  T
Q  253 acaca 257  Q
    |||||    
T  32516506 acaca 32516502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 1287668 - 1287871
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||||||  |||  |||||||| |||||||  | ||||||||| | | |||||  | | ||||||| ||||||| | ||||    
T  1287668 tccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctc-tacctcttttaacttgactctcctccatttgatct 1287766  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||||||||| ||   |||  || || || |||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||    
T  1287767 actcttcttaccacggcatctacgtgtctt-ctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccact 1287865  T
Q  211 ctctct 216  Q
    ||||||    
T  1287866 ctctct 1287871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 11675722 - 11675661
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||||||||| |||  || ||| ||||||||||||||||| | ||||||||||    
T  11675722 tccaactcattaatctctaaatctgtcctaatagtttctcttatagtttttacaggtcttcc 11675661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 24178703 - 24178500
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||||||  |||  |||||||| |||||||  | ||||||||| | | |||||  | | ||||||| ||||||| | ||||    
T  24178703 tccaactcattgaactctaaatcctttctaatggtttctctaatagttttcctaggtcttcctc-tacctcttttaacttgactctcctccatttgatct 24178605  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||||||||| ||   |||  ||||| || ||||   ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||    
T  24178604 actcttcttaccacggcatctacgggtctt-ctctccacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccact 24178506  T
Q  211 ctctct 216  Q
    ||||||    
T  24178505 ctctct 24178500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 37065595 - 37065534
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||| | ||||||||||  ||| |||||||| ||||||||||||||||| ||||||||||    
T  37065595 ttctctctacatgcccaaatgacccaagtctagtttctaccatcttttctactataggtgct 37065534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 28676661 - 28676589
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactct 212  Q
    |||||| | |||||| |||||||||||| |||  ||| ||||||||||||| ||||| |||| ||||||||||    
T  28676661 ttctctctacatgccgaaaccacctaagactattttccaccatcttttctactatagctgctacccgaactct 28676589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 28977075 - 28977155
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaatg 220  Q
    |||||| | ||||| ||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||||||||||||    
T  28977075 ttctctctacatgcacaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctaatg 28977155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 34194724 - 34194834
Alignment:
Q  150 atgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaatgt---catttctaattatatcgcgtctagt 246  Q
    |||||||||||||||| | || | ||| |||||||||| | ||||||||| |  || |||||||||||||||   ||||||||||  ||||  |||||||    
T  34194724 atgcccaaaccacctaggcctggtttccaccatcttttatgttataggtgttatcccaactctctctaatgtttacatttctaatcctatcctgtctagt 34194823  T
Q  247 cttaccacaca 257  Q
     ||||||||||    
T  34194824 tttaccacaca 34194834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 42199586 - 42199483
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||| |||||||| |||| || ||||| ||| ||||||| || |||||||  | || || |||||||||||||| | |||||| | ||||    
T  42199586 tccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctt-tctctccccctagtgatttgactactctccatgtgatct 42199488  T
Q  111 actct 115  Q
    |||||    
T  42199487 actct 42199483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 418237 - 418318
Alignment:
Q  174 ttctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattatatcgcgtctagtcttacc 252  Q
    |||| ||||||||||||  ||||||||| ||| ||||||||||||   |||||||||||||| ||||  |||| ||||||||    
T  418237 ttctgccatcttttctaccataggtgctaccccaactctctctaatgttgtcatttctaattctatcatgtctcgtcttacc 418318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 3775162 - 3775256
Alignment:
Q  17 tcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctac 112  Q
    ||||||||| |||||   ||||||| ||||| ||||||||||| || ||||||| |  |||||||||||||||||||| |  ||||| ||||||||    
T  3775162 tcattaatccctagacttttcttaatagtttatcttatagtttttctaggtctt-cttctgcctctagtgatttgactactatccatttaatctac 3775256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 8492623 - 8492661
Alignment:
Q  219 tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  8492623 tgtcatttctaattatatctcgtctggtcttaccacaca 8492661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 9235240 - 9235166
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgat 88  Q
    |||| |||||||||||||| ||| ||||||| |||||||||  |||||| || ||||||| || ||||||||||||||    
T  9235240 tccagctcattaatctctatatctttcttaatagtttctct--tagtttttctaggtctt-cctctgcctctagtgat 9235166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 15168849 - 15168776
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct--ccccgaactctctctaatg 220  Q
    |||| ||||||||||| || |||  ||||||||||||||||| ||||||||||  |||| ||||| ||||||||    
T  15168849 catgtccaaaccaccttagcctattttctaccatcttttctactataggtgctaccccccaactccctctaatg 15168776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 28186864 - 28186906
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctctta 53  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||    
T  28186864 tccaactcattaatctctaaatctttcttaatagtttctctta 28186906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 34734473 - 34734593
Alignment:
Q  1 catgtctttctccaactcattaatctctag--atccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccc 98  Q
    ||||||||||||||||||||| ||||||||  ||||||| ||| ||||| || |||||||| || || || | ||| | |||| |||||| |||||||||    
T  34734473 catgtctttctccaactcatttatctctagatatccttcataatagtttatcgtatagtttttctagatc-tacccgtacctccagtgatctgactcccc 34734571  T
Q  99 tccatctaatctactcttctta 120  Q
    | ||| | ||||| ||| ||||    
T  34734572 ttcatttgatctattctcctta 34734593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 28075 - 28014
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||| ||||| ||||| ||| ||| ||| ||||||||||||||||| || |||||||||    
T  28075 tccaacttattaacctctaaatctttcctaatagtttctcttatagtttttctaggtcttcc 28014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 1275330 - 1275269
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| ||||||||||    
T  1275330 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgct 1275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 12577077 - 12577137
Alignment:
Q  153 cccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctct 214  Q
    |||||||||| ||||||||| ||| ||||||||||||| || ||||||| ||| ||||||||    
T  12577077 cccaaaccacataagtctagtttccaccatcttttctactacaggtgctaccc-aactctct 12577137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 29922477 - 29922416
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    |||||||  |||||||||| ||| ||||||| ||||||||||||||||| || || ||||||    
T  29922477 tccaacttgttaatctctaaatctttcttaatagtttctcttatagtttttctagatcttcc 29922416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 2066190 - 2066130
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttc 71  Q
    ||||||||||||||||||||||| || |||  ||||||| ||||| ||| || ||||||||    
T  2066190 tccaactcattaatctctagatcttttttagtagtttcttttataatttttctaggtcttc 2066130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 3442950 - 3442982
Alignment:
Q  1 catgtctttctccaactcattaatctctagatc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  3442950 catgtctttctccaattcattaatctctagatc 3442982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 6788260 - 6788141
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||| || |  || ||| ||| |||| || | ||||||| || ||||||||| | ||||||||||||| ||||   |||||||||  ||     
T  6788260 tccaactcattaatttccaagtctttcctaatagttcctttgatagtttttctaggtcttcctc-tgcctctagtgatctgaccatcctccatctggtcg 6788162  T
Q  111 actcttcttactacataatcc 131  Q
    ||||| |||||||||||||||    
T  6788161 actctccttactacataatcc 6788141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 41833807 - 41833874
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctat--tataggtgctccccgaactctct 214  Q
    |||||||||||||||||||  || |||| ||||||||||||||   ||||||||| ||| ||||||||    
T  41833807 catgcccaaaccacctaagcatatgttccaccatcttttctataccataggtgctaccccaactctct 41833874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 4e-53; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 5336121 - 5335855
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| ||||  ||||||| || |||| |||||| | |||| ||||||||||||||||||    
T  5336121 catgtctttctccaactcattaatctctagatcattcttaatagtatctc--atagtttttcaaggttttcccc-tacctcgagtgatttgactcccctc 5336025  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    ||||||||||||||| || |||||| ||||| | | || |||||| |  ||||||||||||||||||||||| ||| ||||||||| ||| ||||| |||    
T  5336024 catctaatctactctcctaactacagaatccacag-ttcttctctctatatgcccaaaccacctaagtctagtttcgaccatctttcctactatagatgc 5335926  T
Q  201 tccccgaactctctctaatg---tcatttctaattatatcgcgtctagtcttaccacacactcaaggcaac 268  Q
    | ||| ||||||||||||||   ||||||||||||  ||   |||||||||||||||||| |||| |||||    
T  5335925 taccccaactctctctaatgttatcatttctaattgcattctgtctagtcttaccacacattcaacgcaac 5335855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 36514287 - 36514543
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||| ||||| ||||||||||||||||| | || |||||||||  ||| || | ||||  ||||| |||||||||| ||||||||||||    
T  36514287 catgtctttctccaattcatttatctctagatccttcttgatagcttctcttatgttttttctatgtct--cccctacctctagtgacttgactcccctc 36514384  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
     |||| ||||||||| | ||||||| ||||| |  ||  | |||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  36514385 tatctgatctactctccatactacagaatccacaagtcgt-ctctctacatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgc 36514483  T
Q  201 tccccgaactctctctaa---tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    | ||| ||||||||||||   |||| ||||||||| |||| ||| |||||||||||||||    
T  36514484 taccccaactctctctaatgttgtcctttctaattctatcccgtttagtcttaccacaca 36514543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 48735979 - 48736248
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    |||||||||||| |||||||| ||||||||| || |  ||| ||  ||||||||||||| || ||||||  ||| | ||||||||||| |||||||| ||    
T  48735979 catgtctttctcaaactcatttatctctagaaccctactaatagcctctcttatagtttttcaaggtctagccc-tacctctagtgatctgactccc-tc 48736076  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    ||| | ||||||||| || |||||||||||| | ||| || | || | ||||  |||||||||||||||||| |||| |||||||||||| | |||||||    
T  48736077 catttgatctactctcctaactacataatccacaggtctt-cgctctacatgagcaaaccacctaagtctagtttctcccatcttttctactgtaggtgc 48736175  T
Q  201 tccccgaactctctc--taat---gtcatttctaattatatcgcgtctagtcttaccacacactcaaggcaac 268  Q
    | ||| |||||||||  ||||   ||||||||||||| |||| | ||||||||||||||||| |||| |||||    
T  48736176 taccccaactctctctataatgtcgtcatttctaattttatctcatctagtcttaccacacattcaacgcaac 48736248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 28628022 - 28628210
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||| || ||||||| || || ||||| |||||||||||  ||||||||  ||||    
T  28628022 tccaactcattaatctctaaatctttcctaatagtttctcttatagtttttctaggtctt-cctctacctcttgtgatttgactatcctccatcggatct 28628120  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||| ||||||||||||||  | || |||||||| | ||||||||||||||||||| | |  ||| |||||| |||||| | ||||||||    
T  28628121 actctccttactacataatctacagg-ttttctctttacatgcccaaaccacctaagccaattttccaccatcatttctactctaggtgct 28628210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 75 - 255
Target Start/End: Original strand, 19262586 - 19262767
Alignment:
Q  75 ctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggt 174  Q
    |||||||||||||||||||| | |||||||| ||||||||||||||||||| ||||  | ||| || |||| | ||||| ||||||||||||| | || |    
T  19262586 ctgcctctagtgatttgactacactccatctgatctactcttcttactaca-aatctacaggtctt-ctctctacatgctcaaaccacctaagccaagtt 19262683  T
Q  175 tctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattatatcgcgtctagtcttaccaca 255  Q
    ||||||||||||||||  ||||||||| ||| ||||||||||||   |||||||||||| | ||||  ||||||| ||||||||    
T  19262684 tctaccatcttttctacaataggtgctaccccaactctctctaatattgtcatttctaactctatcatgtctagtattaccaca 19262767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 14593942 - 14593772
Alignment:
Q  22 aatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttac 121  Q
    ||||||||| | |||||||| ||||||||||||||||| || ||||||| ||||| ||||||||||||||||||| ||| |||| ||||||| |          
T  14593942 aatctctaggttcttcttaatagtttctcttatagtttttctaggtctt-cccctacctctagtgatttgactcctctctatctgatctactat-----a 14593849  T
Q  122 tacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    |||| ||||| | || | |||||  | |||||||||| ||||||||||||| ||||||||| ||||||| ||||||||    
T  14593848 tacagaatccacagg-tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttctactataggtg 14593772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 201
Target Start/End: Original strand, 18605231 - 18605423
Alignment:
Q  7 tttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatcta 106  Q
    ||||| ||||||||| || |||| ||||||| ||| |||||||||| |||||| || |||||| |||  | | |||||||||||||||| |||| ||||     
T  18605231 tttcttcaactcatttatttctaaatccttcataatagtttctcttgtagtttttctaggtctaccca-tacatctagtgatttgactctcctcgatctg 18605329  T
Q  107 atctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||| ||| || |||| ||||||  |  | | |||||| | ||||| |||||||||||||| ||| |||||||||||||| || ||||||||||    
T  18605330 atctaatctcctaactatataatctacatg-tcttctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgct 18605423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 24549777 - 24549870
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatct 105  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||  | |||||||| |  || ||||||||||||||| ||||||||||||    
T  24549777 tccaactcattaatctctagatctttcttaatagtttctcttatagttctttcaggtctt-cttctacctctagtgatttgaatcccctccatct 24549870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 16013465 - 16013295
Alignment:
Q  22 aatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttac 121  Q
    ||||||||| | |||||||| ||||||||||||||||| || ||||||| ||||| ||||| ||||||||||||| ||| |||| ||||||| |          
T  16013465 aatctctaggttcttcttaatagtttctcttatagtttttctaggtctt-cccctacctctggtgatttgactcctctctatctgatctactat-----a 16013372  T
Q  122 tacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    |||||||||| | || | |||||  | |||||||||| ||||||||||||| ||||||||| |||| || ||||||||    
T  16013371 tacataatccacagg-tcttctcactacatgcccaaatcacctaagtctagtttctaccattttttgtactataggtg 16013295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 19119503 - 19119605
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    |||||||||||| |||||||| |||||||||||| |||| | ||||||||| ||||||| || ||||||| || || |||||||||||||||||| ||||    
T  19119503 catgtctttctcaaactcattgatctctagatccatcttgatagtttctctaatagttt-tctaggtctt-ccactacctctagtgatttgactctcctc 19119600  T
Q  101 catct 105  Q
    |||||    
T  19119601 catct 19119605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 257
Target Start/End: Original strand, 30200056 - 30200297
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctact 113  Q
    |||||||||||||||||||| |||||||||| || | ||||||||| |  | ||||||| | || ||| |||| ||||||| | |||||||| || |  |    
T  30200056 aactcattaatctctagatctttcttaaaagatttttttatagtttttttatgtcttcctc-tgtctc-agtgttttgactactctccatctgatatgat 30200153  T
Q  114 cttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctc 213  Q
    || ||||||||||||||  || | | |||| | | |||||| ||| |||||||| |||| ||| ||||||||||||| |||||||| | ||| |||||||    
T  30200154 ctccttactacataatct-cgaggtcttctatttacatgccaaaatcacctaagcctagtttccaccatcttttctactataggtgttaccctaactctc 30200252  T
Q  214 t-ctaatgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    |  |  ||||||||||||| ||||| | |||| ||||||||||||    
T  30200253 taatgttgtcatttctaatcatatcccatctaatcttaccacaca 30200297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 18637759 - 18637567
Alignment:
Q  7 tttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatcta 106  Q
    ||||| ||||||||| || |||| ||||||| ||| |||||||||| || ||| || |||||| |||  | | |||||||||||||||| |||| ||||     
T  18637759 tttcttcaactcatttatttctaaatccttcataatagtttctcttgtattttttctaggtctaccca-tacatctagtgatttgactctcctcgatctg 18637661  T
Q  107 atctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||| ||| || |||| ||||||  |  || || |||| | ||||| |||||||||||||| ||| |||||||||||||| || ||||||||||    
T  18637660 atctaatctcctaactatataatctacatgtctt-ctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgct 18637567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 18651193 - 18651001
Alignment:
Q  7 tttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatcta 106  Q
    ||||| ||||||||| || |||| ||||||| ||| |||||||||| || ||| || |||||| |||  | | |||||||||||||||| |||| ||||     
T  18651193 tttcttcaactcatttatttctaaatccttcataatagtttctcttgtattttttctaggtctaccca-tacatctagtgatttgactctcctcgatctg 18651095  T
Q  107 atctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||| ||| || |||| ||||||  |  || || |||| | ||||| |||||||||||||| ||| |||||||||||||| || ||||||||||    
T  18651094 atctaatctcctaactatataatctacatgtctt-ctctctacatgctcaaaccacctaagtttagtttctaccatcttttataatataggtgct 18651001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 12966209 - 12966027
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||| ||||||||||||| ||  ||||||| ||||||||||||||||| || |||||||       |||||||||||||||||   || ||  | ||||    
T  12966209 tccaaatcattaatctctaaatatttcttaatagtttctcttatagtttttctaggtctt-------cctctagtgatttgactagtcttcacttgatct 12966117  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||| ||||||||| |||   |||| | |||||| | |||||||||||||||||||  ||| ||| ||||||||||||  ||||||||||    
T  12966116 actctccttactacagaatttacggg-tcttctctctacatgcccaaaccacctaagcatagtttccaccatcttttcttctataggtgct 12966027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 216
Target Start/End: Complemental strand, 36136925 - 36136754
Alignment:
Q  43 agtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttt-t 141  Q
    ||||||||||||||||| || ||||||||| | | | |||  |||| |||||| ||||||||| |||| |||||| |||||||  |||    ||| || |    
T  36136925 agtttctcttatagtttttctaggtcttcctc-tacttcttctgatctgactctcctccatctgatctgctcttcgtactacaacatctataggtattct 36136827  T
Q  142 ctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    ||||||  |||||||||| ||||||| |||  ||||||||||||||||| |||||||||| ||| ||||||||||    
T  36136826 ctctat--atgcccaaacaacctaagactattttctaccatcttttctactataggtgctaccccaactctctct 36136754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 1569209 - 1569096
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||||||| || ||| | | || ||||||||||  || |||||  ||||||||| ||||    
T  1569209 tccaactcattaatctctagatctttcttaatagttactcttatagtttttctaggac-tacctctgcctctagcaatctgactatcctccatctgatct 1569111  T
Q  111 actcttcttactaca 125  Q
    ||||| ||| |||||    
T  1569110 actctcctttctaca 1569096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 257
Target Start/End: Complemental strand, 42187568 - 42187415
Alignment:
Q  107 atctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccg 206  Q
    ||||||||| ||||||||||||||  | ||  || |||| | ||||||||||||||||||| |||  ||| |||||||||||||||||||||||| |||     
T  42187568 atctactctccttactacataatctacaggcctt-ctctttacatgcccaaaccacctaagcctattttccaccatcttttctattataggtgctacccc 42187470  T
Q  207 aactctc--tctaa---tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
     ||||||  |||||   || ||||||||| |||||| ||||||||||||| |||||    
T  42187469 gactctctttctaatgctgccatttctaa-tatatcccgtctagtcttactacaca 42187415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 257
Target Start/End: Complemental strand, 47848835 - 47848618
Alignment:
Q  43 agtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttc 142  Q
    ||||||||||||||||| || || |||||| | |||||||||||||  ||||  ||||||||| ||||||||| |||| |||| |||   |  || || |    
T  47848835 agtttctcttatagtttttctagttcttcctc-tgcctctagtgatcagactatcctccatctgatctactctccttagtacagaatttacaagtctt-c 47848738  T
Q  143 tctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct--aatgtcat---ttctaattatatc 237  Q
    |||   ||||||||||||||||||| |||  ||| ||||||||||||| |||||| ||| ||| ||||||||||  ||||| ||   |||| ||  ||||    
T  47848737 tctcgacatgcccaaaccacctaagcctattttccaccatcttttctactataggcgctaccccaactctctctctaatgttatcacttctgatcctatc 47848638  T
Q  238 gcgtctagtcttaccacaca 257  Q
     |||||||||||||||||||    
T  47848637 ccgtctagtcttaccacaca 47848618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 1740927 - 1740791
Alignment:
Q  79 ctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttcta 178  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||||| ||||| |   || | || | | ||| ||||||||||||||| |||| ||| |    
T  1740927 ctctagtgatttgactaccctccatctgatctactctccttactacaaaatccac-aattctcctatctacatacccaaaccacctaagcctagtttcca 1740829  T
Q  179 ccatcttttctattataggtgctccccgaactctctct 216  Q
    |||| ||||||| | ||| |||| ||| ||||||||||    
T  1740828 ccatattttctactgtagatgctacccaaactctctct 1740791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 38135302 - 38135476
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||| ||| || |||| ||||||||||||| ||| || ||||||| |  ||||||||| |||| |||||  ||||||||| ||||    
T  38135302 tccaactcattaatctctaaatcttttttaatagtttctcttatactttttctaggtctt-catctgcctctaatgatctgactatcctccatctgatct 38135400  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    | ||| ||||||||| ||||  | || | |||| | | |||| |||||||||||||| |||  ||| |||||||||||    
T  38135401 a-tctccttactacaaaatctactgg-tcttctgtctacatgtccaaaccacctaagcctattttccaccatcttttc 38135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 40830393 - 40830317
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgattt 90  Q
    |||||||||||| |||||||||||||||| |||||||||||||| || || ||||||| || ||| ||||||||||||    
T  40830393 caactcattaatttctagatccttcttaatagtttctcttatagattttctaggtctt-cctctgtctctagtgattt 40830317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 45601669 - 45601608
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||||||||||||| |||||||  |||||||||||||||| || |||||||||    
T  45601669 tccaactcattaatctctagatctttcttaatggtttctcttatagtttttctaggtcttcc 45601608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 30144968 - 30144857
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||||| ||||||| ||||||||  ||||||| |  |||||||     || |||||||||||||||  |||||||||| ||||    
T  30144968 tccaactcattaatctctagatctttcttaatagtttctcgaatagtttttataggtctt-attttgtctctagtgatttgaccaccctccatctgatct 30144870  T
Q  111 actcttcttacta 123  Q
    ||||||| |||||    
T  30144869 actcttcgtacta 30144857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 13859174 - 13859300
Alignment:
Q  89 ttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    ||||||| ||||||| | ||||||||||||||| |||  |||  ||||| || |||| | ||||||||||||| ||||| |||  |||||||| ||||||    
T  13859174 ttgactctcctccatttgatctactcttcttacgacagcatctacgggtctt-ctctctacatgcccaaaccatctaagcctattttctaccaacttttc 13859272  T
Q  189 tattataggtgctccccgaactctctct 216  Q
    || |||||||||| |||  |||||||||    
T  13859273 tactataggtgctacccccactctctct 13859300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 221
Target Start/End: Complemental strand, 28858238 - 28858029
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatct-aatc 109  Q
    ||||||| ||||||||||||||| ||||||| ||||| ||||||||||| || | |||||  |  || || ||||||||||||    |||||||| ||||    
T  28858238 tccaacttattaatctctagatctttcttaatagtttgtcttatagtttttctaagtctt-actttgtctatagtgatttgacaatgctccatctgaatc 28858140  T
Q  110 tactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaac 209  Q
    |||||||||||||| | ||||| | || |  ||| | | |||||||||||||||||| |  || ||||||||| |||||||  ||||||||  ||| | |    
T  28858139 tactcttcttactatagaatccacagg-tcatctttctacatgcccaaaccacctaacttgagtttctaccatgttttctacaataggtgccaccccatc 28858041  T
Q  210 tctctctaatgt 221  Q
    |||| |||||||    
T  28858040 tctcactaatgt 28858029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 231
Target Start/End: Complemental strand, 30633071 - 30632943
Alignment:
Q  99 tccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggt 198  Q
    ||||||||||||||||| ||||||||| ||||| |      |||||| | ||||||||||||| ||||| | || ||| ||||| |||| ||| ||||||    
T  30633071 tccatctaatctactctccttactacagaatccacac----ttctctctacatgcccaaaccatctaagccgagcttccaccattttttttatgataggt 30632976  T
Q  199 gctccccgaactctctctaatgtcatttctaat 231  Q
    ||| |||  ||||||||||||| ||||||||||    
T  30632975 gctaccccgactctctctaatgccatttctaat 30632943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 257
Target Start/End: Complemental strand, 39812084 - 39811901
Alignment:
Q  78 cctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttct 177  Q
    |||||||||||||| ||  ||||||||| ||||||||| ||||||| | ||||  |   | || |||| | ||||||||||| ||||||| | || ||      
T  39812084 cctctagtgatttggctttcctccatctgatctactctccttactatagaatctacatctctt-ctctctacatgcccaaactacctaagccgagttttc 39811986  T
Q  178 accatcttttctattataggtgctccccgaa--ctctctctaa---tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    ||||| |||||||| ||||||||| ||| ||  ||||||||||   |||||||||||||  |||| |||||||||||||||||||    
T  39811985 accattttttctatgataggtgctgccccaactctctctctaatgttgtcatttctaatcctatcacgtctagtcttaccacaca 39811901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 7189440 - 7189518
Alignment:
Q  138 ttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||||| | |||||||||||||||||||  ||  ||||||||||||||||| |||||||||  ||| ||||||||||    
T  7189440 ttttctctctacatgcccaaaccacctaagcttattttctaccatcttttctactataggtgcgaccccaactctctct 7189518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 217
Target Start/End: Complemental strand, 45558468 - 45558351
Alignment:
Q  99 tccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggt 198  Q
    ||||||| ||||||||| || |||||| ||||| | ||| || |||| | | ||| ||||||||||||||| || |||||||| |||||||| |||||||    
T  45558468 tccatctgatctactctcctaactacagaatccacaggtatt-ctctctacgtgcacaaaccacctaagtcgagtttctaccaacttttctactataggt 45558370  T
Q  199 gctccccgaactctctcta 217  Q
    | | ||| |||||||||||    
T  45558369 ggtaccccaactctctcta 45558351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 30814771 - 30814851
Alignment:
Q  22 aatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccat 103  Q
    |||||||||||| ||||||| ||||||||||||||| | || ||||||| || |||||||||||||| |||||  |||||||    
T  30814771 aatctctagatctttcttaatagtttctcttatagtgtttctaggtctt-cctctgcctctagtgatctgactatcctccat 30814851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34745950 - 34745877
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcccc 74  Q
    ||||| ||||||||||||||| |||| |||||||||| ||| |||||||||||| |||| || |||||| ||||    
T  34745950 catgtttttctccaactcatttatctttagatccttcctaatagtttctcttatggtttttctaggtctacccc 34745877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25578063 - 25578023
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaa 41  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  25578063 catgtctttctccaattcattaatctctagatccttcttaa 25578023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 27021908 - 27021984
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||||||||| |||| ||  |||| |||||||| |||||||||| ||| ||||||||||    
T  27021908 ttctctctacatgcccaaaccacctaagcctagttttcaccaacttttctactataggtgctaccccaactctctct 27021984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 254
Target Start/End: Complemental strand, 33073018 - 33072901
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattatat 236  Q
    |||||| | |||||||||| || ||||| |||  |||||||| |||||||| |||||||||| |||  |||||||||||   ||||||| |||||  |||    
T  33073018 ttctctctacatgcccaaatcatctaagcctattttctaccaacttttctactataggtgctacccccactctctctaatggtgtcattcctaatcctat 33072919  T
Q  237 cgcgtctagtcttaccac 254  Q
    |  |||||||||||||||    
T  33072918 cttgtctagtcttaccac 33072901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 7220955 - 7220846
Alignment:
Q  5 tctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatc 104  Q
    ||||| |||||| |||||||||||| ||| || |||| | |||| ||||| |||| |  ||||||| | | |||||||||| ||||||||  ||||||||    
T  7220955 tctttatccaacacattaatctctaaatctttgttaataatttcacttatggtttttataggtcttactc-tgcctctagtaatttgactatcctccatc 7220857  T
Q  105 taatctactct 115  Q
    |||||||||||    
T  7220856 taatctactct 7220846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 23720972 - 23720831
Alignment:
Q  74 cctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctagg 173  Q
    |||| |||||||||||||||| |||| ||||| ||||||||| |||| | || || || |  |  ||| ||  ||||||||||||||||||||| ||||     
T  23720972 cctgtctctagtgatttgactaccctacatctgatctactctccttattccacaacccacatgcattt-tccctgcatgcccaaaccacctaaggctagt 23720874  T
Q  174 ttctaccatcttttctattataggtgctccccgaactctctct 216  Q
     ||  |||||||||||| |||||||||  ||| ||||||||||    
T  23720873 ctccgccatcttttctactataggtgcaaccctaactctctct 23720831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 30664761 - 30664715
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagt 57  Q
    ||||||||||||||||||||||| ||||||| ||||||| |||||||    
T  30664761 tccaactcattaatctctagatctttcttaatagtttcttttatagt 30664715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 38920851 - 38920789
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactc 211  Q
    |||||||||||||| |||| |||| ||| ||||||||||||| |||||||||| ||| |||||    
T  38920851 catgcccaaaccacttaagcctagtttccaccatcttttctactataggtgctaccccaactc 38920789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 40830289 - 40830190
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattatat 236  Q
    |||||| | ||||||||||||||||||||  || ||||||||||||||||   ||||||||| ||| |||||| |||||   |||||||||||||| |||    
T  40830289 ttctctcttcatgcccaaaccacctaagtagagtttctaccatcttttcttcaataggtgctaccc-aactctttctaatattgtcatttctaattctat 40830191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 41461292 - 41461207
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttc--cccctgcctctagtgatttgact 94  Q
    ||||||||||||||| ||||||| || |||| ||||||||||||||||| |   |||| ||  || ||||||||||||||||||||    
T  41461292 tccaactcattaatcactagatctttattaatagtttctcttatagtttttttgggtcgtcctcctctgcctctagtgatttgact 41461207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 43281789 - 43281660
Alignment:
Q  90 tgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttct 189  Q
    |||||| ||||||| | ||||||||||||||| ||   |||  ||||| || |||| | |||| |||||||| ||||| |||  |||||||| |||||||    
T  43281789 tgactctcctccatttgatctactcttcttacaacggcatctacgggtctt-ctctctacatgtccaaaccatctaagcctattttctaccaacttttct 43281691  T
Q  190 attataggtgctccccgaactctctctaatg 220  Q
    | |||||||||| |||  |||||||||||||    
T  43281690 actataggtgctacccccactctctctaatg 43281660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 29653638 - 29653683
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||    
T  29653638 aactcattaatctctagatctttcttaatagtttctcttacagttt 29653683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 42177110 - 42177206
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatcta 111  Q
    |||||||| ||||||||||| ||||||| || ||||||||||| || || | ||||||| ||  |||||| |||||||||| |||| ||||| |||||    
T  42177110 aactcatttatctctagatctttcttaatagattctcttataggttttctacgtcttcctcc-acctctaatgatttgactacccttcatcttatcta 42177206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 12841441 - 12841552
Alignment:
Q  89 ttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    ||||||| ||||||| | ||||||||||||||| ||   |||  ||||| || |||| | ||||||||||||| ||||| |||  |||||||| ||||||    
T  12841441 ttgactctcctccatttgatctactcttcttaccacggcatctacgggtctt-ctctctacatgcccaaaccatctaagcctattttctaccaacttttc 12841539  T
Q  189 tattataggtgct 201  Q
    || ||||||||||    
T  12841540 tactataggtgct 12841552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 34869486 - 34869410
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||||||||    
T  34869486 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctct 34869410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 257
Target Start/End: Original strand, 40008573 - 40008755
Alignment:
Q  78 cctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttct 177  Q
    |||||| |||||| |||  ||||||||||||||||||| ||| | ||| ||||    ||||| ||||||  ||||||||||||||||||  | || |||     
T  40008573 cctctaatgatttaactatcctccatctaatctactctcctttcaacaaaatcaataggtttatctcta--catgcccaaaccacctaatccgagtttcc 40008670  T
Q  178 accatcttttctattataggtgct--ccccgaactctctctaa---tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    |||||||||||| | ||||||| |   ||| ||||||||||||   |||||||||||||| | |   ||||||| ||||||||||    
T  40008671 accatcttttctttgataggtgtttatccccaactctctctaatgttgtcatttctaattcttttttgtctagttttaccacaca 40008755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 49029342 - 49029266
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||||||||    
T  49029342 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctct 49029266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 215
Target Start/End: Original strand, 2885938 - 2886013
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctc 215  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  ||||||||    
T  2885938 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctc 2886013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 25579233 - 25579284
Alignment:
Q  79 ctctagtgatttgactcccctccatctaatctactcttcttactacataatc 130  Q
    |||| |||||||||||  ||||||||||||||||||||||||| ||| ||||    
T  25579233 ctcttgtgatttgactatcctccatctaatctactcttcttaccacagaatc 25579284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 31005339 - 31005213
Alignment:
Q  89 ttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    ||||||| ||||||| | ||||||||||||||| ||   |||  ||||| || |||| | ||||||||||||| ||||  |||  |||||||| ||||||    
T  31005339 ttgactctcctccatttgatctactcttcttaccacggcatctacgggtctt-ctctctacatgcccaaaccatctaaacctattttctaccaacttttc 31005241  T
Q  189 tattataggtgctccccgaactctctct 216  Q
    || |||||||||| |||  |||||||||    
T  31005240 tactataggtgctacccccactctctct 31005213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45558533 - 45558482
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctctt 52  Q
    |||||||||| |||||||||| |||||||||||||||  || ||||||||||    
T  45558533 catgtctttcaccaactcatttatctctagatccttcccaatagtttctctt 45558482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 32368426 - 32368535
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||| ||||||||| ||| | ||||| || ||||||||||| || || || |||| ||  ||||||||||||||||||| |||| ||||  ||||    
T  32368426 tccaactcactaatctctaaatcttccttaatagcttctcttatagattttctagatctt-cctttgcctctagtgatttgactacccttcatccgatct 32368524  T
Q  111 actcttcttac 121  Q
    | ||| |||||    
T  32368525 attctccttac 32368535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 40169706 - 40169640
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctc 215  Q
    ||||||||||||||||||| |||  ||| ||||||||||||| |||| ||||| ||| || ||||||    
T  40169706 catgcccaaaccacctaagcctattttccaccatcttttctactataagtgctaccccaattctctc 40169640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 9210793 - 9210854
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||| ||||| ||  ||| |||||||||||||||||||||  | |||||||||    
T  9210793 tccaactcattaacctctaaatttttcctaaaagtttctcttatagttttcctaggtcttcc 9210854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 28021030 - 28020908
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactc--tctctaatg---tcatttctaattat 234  Q
    |||||| | ||||||||||||||||||| | || ||| |||||||||||||  ||| ||||| ||| |||||  |||||||||   ||||||| ||| ||    
T  28021030 ttctctctacatgcccaaaccacctaagccaagtttccaccatcttttctacgataagtgctaccccaactctttctctaatgttatcatttcgaatcat 28020931  T
Q  235 atcgcgtctagtcttaccacaca 257  Q
    |||  ||| ||||||| ||||||    
T  28020930 atcatgtccagtcttatcacaca 28020908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 30914591 - 30914632
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctctt 52  Q
    ||||||||||||||||||||||||||| | | ||||||||||    
T  30914591 tccaactcattaatctctagatccttcatgatagtttctctt 30914632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 35906417 - 35906478
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| ||||||||||    
T  35906417 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgct 35906478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 36101981 - 36102042
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||| | ||| ||||||||||||||| |||  ||| | ||||||||||||||||||||||    
T  36101981 ttctctctacatccccaaaccacctaagcctattttccaacatcttttctattataggtgct 36102042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 38921167 - 38921236
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtctt 70  Q
    ||||||||||||||||   |||| || |||||||||||||| |||| ||||| |||||| || |||||||    
T  38921167 catgtctttctccaacctgttaacctgtagatccttcttaatagttcctcttctagtttttctaggtctt 38921236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 257
Target Start/End: Original strand, 40139144 - 40139254
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaatgt---catttctaattatatcgcgtctag 245  Q
    |||||||| | |||||||| | || ||| ||||| ||||||| ||||||||   ||||| |||||||||||||   | ||||||||  |||| |||||||    
T  40139144 catgcccagatcacctaagcccagtttccaccatattttctactataggtgaaacccga-ctctctctaatgttgtcttttctaatcttatcccgtctag 40139242  T
Q  246 tcttaccacaca 257  Q
    ||||||||||||    
T  40139243 tcttaccacaca 40139254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 41948582 - 41948521
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||| | |||||||||||||| |||| |||| ||| ||||||||||||||| || |||||    
T  41948582 ttctctctacatgcccaaaccacttaagcctagtttccaccatcttttctattgtaagtgct 41948521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 7220810 - 7220750
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    |||||| | ||||||||||||||||||| | || ||||| |||||||||||  ||||||||    
T  7220810 ttctctctacatgcccaaaccacctaagccaagtttctatcatcttttctacaataggtgc 7220750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 19262547 - 19262587
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctct 51  Q
    |||||||||||||||||||||| ||||| || |||||||||    
T  19262547 tccaactcattaatctctagatgcttctaaatagtttctct 19262587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 21517469 - 21517529
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttc 71  Q
    ||||||| ||||||||||| ||  || |||| ||||||||||||||||| || ||||||||    
T  21517469 tccaacttattaatctctaaatattttttaatagtttctcttatagtttttctaggtcttc 21517529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 37976428 - 37976368
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttc 71  Q
    ||||||||||||||||||| ||| ||| ||  |||||| |||||||||| || ||||||||    
T  37976428 tccaactcattaatctctaaatctttcatattagtttcacttatagtttttctaggtcttc 37976368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 45841204 - 45841256
Alignment:
Q  147 tgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    ||||||||||||||| ||||  |||| ||| ||| ||||||||||||||||||    
T  45841204 tgcatgcccaaaccaactaaacctagtttccaccgtcttttctattataggtg 45841256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 4e-50; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 32043793 - 32043534
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| |||| |||||||||||| | ||||||||| ||||||| |  ||||||| ||||| |||||||||||||||| ||||||    
T  32043793 catgtctttctccaactcattgatctttagatccttcttgatagtttctctaatagtttttttaggtctt-cccctacctctagtgatttgacacccctc 32043695  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    ||||| ||||| ||| |||||||||  |||| | || | |||||| | |||| |||||||||| |||||||| |||||||||||||| || ||||||||     
T  32043694 catctgatctattctccttactacaacatccacagg-tcttctctctacatggccaaaccaccaaagtctagtttctaccatcttttgtactataggtga 32043596  T
Q  201 tccccgaa--ctctctctaa---tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    | ||| ||  ||||||||||   |||||||||||||| |||| |||||||||||||||||||    
T  32043595 taccccaactctctctctaatgttgtcatttctaattctatcccgtctagtcttaccacaca 32043534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 7531723 - 7531852
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||||| |||||||| || ||||| | ||| | ||||||||||| |||||||||||    
T  7531723 catgtctttctccaactcatttatctctagatccttcctaatagtttctcgtatagtttttctaggtc-tacccttacctctagtgatctgactcccctc 7531821  T
Q  101 catctaatctactcttcttactacataatcc 131  Q
    ||||| ||||||||| |||||||||||||||    
T  7531822 catctgatctactctccttactacataatcc 7531852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 268
Target Start/End: Original strand, 10079996 - 10080254
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||||| || ||||||| || || |||||||||||||||||||||| ||| | ||||    
T  10079996 tccaactcattaatctctagatctttcttaacagtttttcttatagtttctctaggtctt-cctctacctctagtgatttgactccccttcatttgatct 10080094  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaa-- 208  Q
    ||||| ||||||||| ||||| | || | |||||| | ||||||||||||| | | | |||| ||| ||||||||||||| | ||| |||| ||  ||      
T  10080095 actctccttactacaaaatcctcagg-tcttctctctacatgcccaaaccatc-aggcctagtttccaccatcttttctact-tagatgctacctcaact 10080191  T
Q  209 ctctctctaa---tgtcatttctaattatatcgcgtctagtcttaccacacactcaaggcaac 268  Q
    ||||||||||   |||||||||||||  |||| ||||||||||||||| |||| ||| |||||    
T  10080192 ctctctctaatgttgtcatttctaatcttatctcgtctagtcttaccaaacacccaacgcaac 10080254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 39953343 - 39953602
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||| |||||| |||||||| ||||||||||||||| ||| |||||||||| ||||||  | ||||| | ||||| ||||||||||| ||| || |||     
T  39953343 catgtttttctctaactcatttatctctagatccttcctaatagtttctcttttagttttcctaggtc-tacccctacctctagtgatctgattcgcctt 39953441  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    ||||| ||||||||| |||||||||||||||   || |   |||| | |||||| ||||||||||| ||||| ||||||||||||||||  |||||||||    
T  39953442 catctgatctactctccttactacataatccatagg-tcacctctctacatgcctaaaccacctaaatctagtttctaccatcttttctcatataggtgc 39953540  T
Q  201 tccccgaa--ctctctctaatgtc---atttctaattatatcgcgtctagtcttaccacaca 257  Q
    |  || ||  ||||||||||||||   |||||||||||||||  || || ||||||||||||    
T  39953541 tatcccaactctctctctaatgtcattatttctaattatatcatgtttaatcttaccacaca 39953602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 16351580 - 16351405
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||| | |||  ||| ||||| ||||||||||||    
T  16351580 catgtctttctc-aactcattaatctctagatccttcttaatagtttctctaatagtttttctaggtctt-ctcctatctcaagtgacttgactcccctc 16351483  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctac 179  Q
    ||||| ||||||||| |||||||||| ||||    | |||||||| | |||||| |||||||| |||||||| ||||||    
T  16351482 catctgatctactctccttactacatgatccaaaag-ttttctctctacatgcctaaaccacccaagtctagtttctac 16351405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 214
Target Start/End: Complemental strand, 29700437 - 29700268
Alignment:
Q  43 agtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggt-tttt 141  Q
    |||||||||| |||||| || ||||||||| | | ||||||||||| |||||  ||||||||||||||||||| ||||||||| |||||   ||| ||||    
T  29700437 agtttctcttttagtttttctaggtcttcctc-tacctctagtgatatgactatcctccatctaatctactctccttactacagaatccaatggtctttt 29700339  T
Q  142 ctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctct 214  Q
    ||||||  |||||||||||||||||| | |  |||  |||||||||||| |||||||||| ||| ||||||||    
T  29700338 ctctat--atgcccaaaccacctaagccaactttcctccatcttttctactataggtgctaccccaactctct 29700268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 257
Target Start/End: Complemental strand, 25985696 - 25985465
Alignment:
Q  26 tctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttactaca 125  Q
    |||| ||||||||||| |||||| | | |||||| || ||||||||| | | |||||||||||||||||||||| ||||| ||||| ||| |||||| ||    
T  25985696 tctaaatccttcttaatagtttcccatttagtttttctaggtcttcctc-tacctctagtgatttgactcccctacatctgatctagtctccttacttca 25985598  T
Q  126 taatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaa---tgtc 222  Q
     ||| | |  || || ||||   |||||| ||| |||  |||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||   ||||    
T  25985597 aaattcacatgtctt-ctctca-catgccaaaatcacgcaagtctagtttctaccatcttttctactataggtgctaccccaactctctctaatgttgtc 25985500  T
Q  223 atttctaattatatcgcgtctagtcttaccacaca 257  Q
     ||||||||| ||||  |||| |||||||||||||    
T  25985499 gtttctaattctatcctgtcttgtcttaccacaca 25985465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 38178349 - 38178467
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||| ||||| || || |||| ||||||||||||||||| || ||||||| || || ||||||| |||||||||  ||||||||| ||||    
T  38178349 tccaactcattaatgtctaggtctttgttaatagtttctcttatagtttttctaggtctt-cctctacctctagcgatttgactatcctccatctgatct 38178447  T
Q  111 actcttcttactacataatc 130  Q
    ||||| ||||||||| ||||    
T  38178448 actctccttactacaaaatc 38178467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 4011282 - 4011180
Alignment:
Q  5 tctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatc 104  Q
    ||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||| || ||||||| || ||| |||||| ||||| ||| ||| |||||    
T  4011282 tctttatccaactcattaatctttagatctttcttaatagtttctcttatagtttttctaggtctt-cctctgtctctagcgatttaactacccaccatc 4011184  T
Q  105 taat 108  Q
    ||||    
T  4011183 taat 4011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 29520842 - 29520725
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||| ||| ||| ||| ||||||||||||||||| || ||| ||| || || ||||| |||||||||||  ||||||||| ||||    
T  29520842 tccaactcattaatctctaaatcgttcctaacagtttctcttatagtttttctagg-ctt-cctctacctcttgtgatttgactatcctccatctgatct 29520745  T
Q  111 actcttcttactacataatc 130  Q
    ||||| ||||||||| ||||    
T  29520744 actctccttactacaaaatc 29520725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 16971843 - 16971956
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||| || |||||||||||  |||||||||||||||| || | || || ||| ||| ||||||||||| ||| |||| |||||||| |    
T  16971843 tccaactcattaatctttatatccttcttaatcgtttctcttatagtttttctaagt-tttcccgtgcatctagtgatttcactacccttcatctaatat 16971941  T
Q  111 actcttcttactaca 125  Q
    ||||| |||||||||    
T  16971942 actctccttactaca 16971956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 45419294 - 45419186
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattatatcgcgtctag 245  Q
    |||||||||||||||||||||||  || |||||||||||||| |||||||||| ||| || |||||||||   ||||||| |||||  |||| | |||||    
T  45419294 catgcccaaaccacctaagtctattttataccatcttttctactataggtgctaccccaattctctctaatggtgtcattcctaatcttatcccttctag 45419195  T
Q  246 tcttaccac 254  Q
    |||||||||    
T  45419194 tcttaccac 45419186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 45512587 - 45512696
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctact 113  Q
    |||||||||||||| |  || ||| ||| ||||||||||||||||| || ||||||||| | |||||||||||||||||||  |  ||||||||||||||    
T  45512587 aactcattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttcctc-tgcctctagtgatttgactatctgccatctaatctact 45512685  T
Q  114 cttcttactac 124  Q
    || ||||||||    
T  45512686 ctgcttactac 45512696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 35643695 - 35643777
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgact 94  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||| || ||||||| || ||||||||||| || |||||    
T  35643695 tccaactcattaatctctagatctttcttaataatttctcttatagtttttctaggtctt-cctctgcctctagtaatctgact 35643777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 200
Target Start/End: Complemental strand, 34196308 - 34196165
Alignment:
Q  56 gtttatccaggtcttcccc---ctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatg 152  Q
    |||| ||||||||||||||   || ||||||||||||||||| |||||||||| || |||||| |||| |||| ||||| | ||| || |||||  ||||    
T  34196308 gtttttccaggtcttcccctacctacctctagtgatttgacttccctccatctgat-tactctccttagtacagaatccccaggtctt-ctcta--catg 34196213  T
Q  153 cccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    |||||||||| ||||||||| ||||||  | ||||||| |||||||||    
T  34196212 cccaaaccacataagtctagtttctactgttttttctactataggtgc 34196165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 37826459 - 37826374
Alignment:
Q  36 tcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttact 122  Q
    |||||| |||||||||||||||||||| ||||| |||| |||||||||||||||||||| | || ||||| ||||||| | ||||||    
T  37826459 tcttaatagtttctcttatagtttatctaggtc-tccctctgcctctagtgatttgactactcttcatctgatctactttccttact 37826374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26685998 - 26686067
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtctt 70  Q
    |||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||| || || |||||||    
T  26685998 catgtctttctccaactcatcaatctctaggtcctacttaacagtttctcttatagcttttctaggtctt 26686067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 13171875 - 13171987
Alignment:
Q  150 atgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct--aat---gtcatttctaattatatcgcgtcta 244  Q
    ||||||||||||||||||  ||  ||| ||||||||||||| |||||||||| ||| ||||||||||  |||   ||||||||||||  |||| ||||||    
T  13171875 atgcccaaaccacctaagcatattttccaccatcttttctactataggtgcttccccaactctctctctaatcttgtcatttctaatcctatcccgtcta 13171974  T
Q  245 gtcttaccacaca 257  Q
    ||||||| |||||    
T  13171975 gtcttactacaca 13171987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 30783131 - 30783225
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatcta 106  Q
    ||||||||||||||||||||||| |||| || |||||||||||| ||||  | || |||| || |||||||||||||| |||||  ||||||||||    
T  30783131 tccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatctt-cctctgcctctagtgatctgactatcctccatcta 30783225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 32931154 - 32931036
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||| || | ||| ||| ||| ||||||||| ||||||| |  ||||||||| | ||||||||||||| |||||  ||||||||| ||||    
T  32931154 tccaactcattaatttcaaaatctttcctaatagtttctctgatagtttttttaggtcttcctc-tgcctctagtgatatgactatcctccatctgatct 32931056  T
Q  111 actcttcttactacataatc 130  Q
    | ||| ||||||||| ||||    
T  32931055 agtctccttactacagaatc 32931036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 79220 - 79131
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctcc 101  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||| | || | | ||| || |||| ||||||||||||||| ||||||    
T  79220 tccagctcattaatctctagatctttcttaatagtttctcttatagtgtttctaagcctt-cctctgcttctagtgatttgactaccctcc 79131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 3079693 - 3079793
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||| |||| | ||||| ||||||| |||||||||||||| ||||| ||||||| ||  | ||||||||||||| |||||||| ||||| ||||    
T  3079693 tccaactcatcaatccccagatctttcttaatagtttctcttatag-ttatctaggtctt-cctttacctctagtgatttcactccccttcatctgatct 3079790  T
Q  111 act 113  Q
    |||    
T  3079791 act 3079793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 38901898 - 38901956
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||||||| |||||||||||||||| |||| ||| |||||| ||||||||||    
T  38901898 catgtctttctccaaatcattaatctctagattcttcctaatagtttcccttatagttt 38901956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 23023418 - 23023357
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    |||||||||||||||| |||||| ||||||  ||||||||||||||||| || |||||||||    
T  23023418 tccaactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcc 23023357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30812895 - 30812968
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcccc 74  Q
    ||||||||| ||||||||||| ||||||||||||||| ||| |||||||  |||||||| || |||||| ||||    
T  30812895 catgtctttttccaactcatttatctctagatccttcctaacagtttcttgtatagtttttctaggtctacccc 30812968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 38409130 - 38409230
Alignment:
Q  30 gatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataat 129  Q
    |||||||| ||| |||||| | |||||||| || |||||| |||| | |||| |||| |||||||| ||||||||| ||||||||| ||| |||||||||    
T  38409130 gatccttcataatagtttcgcgtatagtttttctaggtctacccc-tacctccagtggtttgactctcctccatctgatctactctccttgctacataat 38409228  T
Q  130 cc 131  Q
    ||    
T  38409229 cc 38409230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 43733400 - 43733339
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||||||||||||||||||  | |||||||||| |||||| || |||||||||    
T  43733400 tccaactcattaatctctagatccttctcgatagtttctcttgtagtttttctaggtcttcc 43733339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 16705816 - 16705706
Alignment:
Q  150 atgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaatgt---catttctaattatatcgcgtctagt 246  Q
    |||||||||| || |||| ||||  || |||||||||| || ||||| |||| | | |||||||||||||||   ||||||||||| |||| | ||||||    
T  16705816 atgcccaaactacttaagcctagtctccaccatcttttttactatagatgctactccaactctctctaatgttgtcatttctaattctatcccatctagt 16705717  T
Q  247 cttaccacaca 257  Q
    |||||||||||    
T  16705716 cttaccacaca 16705706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 24399878 - 24399922
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttata 55  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||    
T  24399878 tccaactcattaatctcgagatccttcttaatagtttctcttata 24399922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 30456441 - 30456512
Alignment:
Q  153 cccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaac--tctctctaatgtc 222  Q
    |||||||||| ||||||||| ||||||||||||||||| |||||||||  | |||||  |||||||||||||    
T  30456441 cccaaaccacataagtctagtttctaccatcttttctactataggtgcaactcgaactatctctctaatgtc 30456512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 39967588 - 39967636
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  39967588 tccaactcattaatcgctagatctttcttaatagtttctcttatagttt 39967636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 5908839 - 5908721
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||  | |||| || |||| ||||||||||||||||| || ||||||| ||  || |||||||||| ||||   |||||| || ||||    
T  5908839 tccaactcattaatccttggatcttttttaatagtttctcttatagtttttctaggtctt-cctatgtctctagtgatctgaccatcctccacctgatct 5908741  T
Q  111 actcttcttactacataatc 130  Q
    ||||| ||||||||| ||||    
T  5908740 actctccttactacaaaatc 5908721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 44681293 - 44681377
Alignment:
Q  178 accatcttttctattataggtgctccccgaact--ctctctaatgt---catttctaattatatcgcgtctagtcttaccacaca 257  Q
    |||||||||||||||||||||||| ||  ||||  |||||||||||   ||||||||||  |||| |||||||||||||||||||    
T  44681293 accatcttttctattataggtgctaccacaactgtctctctaatgttgtcatttctaatcttatctcgtctagtcttaccacaca 44681377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 7046462 - 7046350
Alignment:
Q  76 tgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggtt 175  Q
    |||| ||||||||||||||  |||||| || ||||||||| ||||||||| || |  || ||||| |||| | ||||||||||||| ||||| | |||||    
T  7046462 tgccgctagtgatttgactatcctcca-ctgatctactctccttactacagaagctacgtgtttt-ctctctacatgcccaaaccagctaagccgaggtt 7046365  T
Q  176 ctaccatcttttcta 190  Q
    | |||||||||||||    
T  7046364 ccaccatcttttcta 7046350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 249
Target Start/End: Complemental strand, 9695697 - 9695583
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctcta-----atgtcatttctaattat 234  Q
    |||||| | ||||||||||||||||||| | || ||| ||||||||||||| |||||||||| ||| || | ||||||      |||||||||||||| |    
T  9695697 ttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctactataggtgctaccccaaatatctctataatgttgtcatttctaattct 9695598  T
Q  235 atcgcgtctagtctt 249  Q
    |||  ||||||||||    
T  9695597 atcctgtctagtctt 9695583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 18474176 - 18474294
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctc-taatgtcatttctaattatatcg 238  Q
    |||||| | ||||| ||||||| ||||| |||| ||| |||||| |||||| |||||||||| | | ||||||||  || ||||||||||| || ||||     
T  18474176 ttctctctacatgctcaaaccaactaagcctagtttccaccatcatttctactataggtgctactctaactctctaatattgtcatttctatttctatca 18474275  T
Q  239 cgtctagtcttaccacaca 257  Q
    | ||||| |||||||||||    
T  18474276 catctagccttaccacaca 18474294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 43904754 - 43904867
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||| |||  || |||  |||||||||||||| | || ||||||| ||  | ||||| || ||||||||  ||||||||| ||||    
T  43904754 tccaactcattaatctctaaatctctcataaccgtttctcttatagtatttctaggtctt-cctgtacctcttgtaatttgactatcctccatctgatct 43904852  T
Q  111 actcttcttactaca 125  Q
    | |||||||||||||    
T  43904853 attcttcttactaca 43904867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 34196129 - 34196064
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctct 214  Q
    |||||||||||||| ||||||||| ||||||  | ||||||| |||||||||| ||| ||||||||    
T  34196129 catgcccaaaccacataagtctagtttctactgttttttctactataggtgctaccccaactctct 34196064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 36565330 - 36565533
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||||||  |||  |||||||| |||||||  | ||||||||| | | |||||  | | ||||||| ||||||| | ||||    
T  36565330 tccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctc-tacctcttttaacttgactctcctccatttgatct 36565428  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    || |||||||| ||   |||  ||||| || |||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||    
T  36565429 acccttcttaccacggcatctacgggtatt-ctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccact 36565527  T
Q  211 ctctct 216  Q
    ||||||    
T  36565528 ctctct 36565533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 256
Target Start/End: Original strand, 10824393 - 10824497
Alignment:
Q  153 cccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctct-ctaatgtcatttctaattatatcgcgtctagtcttac 251  Q
    ||||||||||||||| |||  ||| ||||||||||||| | |||||||| ||  ||||||||  || | | ||||||||| ||||| | |||||||||||    
T  10824393 cccaaaccacctaagcctattttcgaccatcttttctactttaggtgctgcctcaactctctaatatttttatttctaatcatatcccatctagtcttac 10824492  T
Q  252 cacac 256  Q
    |||||    
T  10824493 cacac 10824497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34196603 - 34196551
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctctta 53  Q
    |||||||||||  || ||||||||||||||||||||||||| | |||||||||    
T  34196603 catgtctttctttaaatcattaatctctagatccttcttaacaatttctctta 34196551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 43732607 - 43732563
Alignment:
Q  155 caaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    |||||||||||||||| | ||||||||||||||||| ||||||||    
T  43732607 caaaccacctaagtcttgtttctaccatcttttctactataggtg 43732563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 2216480 - 2216387
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatcta 106  Q
    ||||||||||| ||||||| ||| ||||||| ||||||||||||  ||| || ||||||| || || ||||||||||| |||||  ||||||||||    
T  2216480 tccaactcattgatctctaaatc-ttcttaatagtttctcttatgttttttctaggtctt-cctctacctctagtgatctgactatcctccatcta 2216387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 3645275 - 3645232
Alignment:
Q  15 actcattaatctctagatccttcttaaaagtttctcttatagtt 58  Q
    |||||||||||||||| || ||||||| ||||||||||||||||    
T  3645275 actcattaatctctaggtctttcttaacagtttctcttatagtt 3645232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 16917376 - 16917200
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||| ||| | ||| | |||||| | ||||| || || ||||||||  | | ||| |||||||||||||  |||| |||| ||||    
T  16917376 tccaactcattaatctctaaatcttccttgatagtttcacctatagcttttctaggtcttcttc-tacctgtagtgatttgactatcctcaatctgatct 16917278  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttcta 190  Q
    ||||| ||||||||| ||||  |  |   |||||| | ||||||||||||||||||| |||| ||  |||||||||||||    
T  16917277 actctccttactaca-aatctacaag-ccttctctttacatgcccaaaccacctaagcctagtttgcaccatcttttcta 16917200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 30198355 - 30198473
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||| | ||| ||||||| | ||||||||||||||| || | ||| | || ||||||||||||   |||||  ||| ||||| ||||    
T  30198355 tccaactcattaatctcaatatctttcttaataatttctcttatagtttttctaagtc-tacctctgcctctagtgtactgactatccttcatctgatct 30198453  T
Q  111 actcttcttactacataatc 130  Q
    |||||  |||||||| ||||    
T  30198454 actctcgttactacaaaatc 30198473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 35362739 - 35362857
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||| || | ||| ||| ||| ||||||||  ||||||| || ||||||| || |||||| ||| |||||||||  ||||||| | ||||    
T  35362739 tccaactcattaatttccaaatctttcctaatagtttctccgatagtttttctaggtctt-cctctgcctatagggatttgactatcctccatttgatct 35362837  T
Q  111 actcttcttactacataatc 130  Q
    ||||| ||| ||||| ||||    
T  35362838 actctccttgctacaaaatc 35362857  T

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Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 38391986 - 38392100
Alignment:
Q  15 actcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactc 114  Q
    |||||||||||| |||||| |||||||  ||||||| |||||||| || ||||||| || ||| || ||||||  ||||| |||| ||||| | ||||||    
T  38391986 actcattaatctgtagatctttcttaatggtttctcatatagtttttctaggtctt-cctctgtctatagtgagctgactacccttcatctgacctactc 38392084  T
Q  115 ttcttactacataatc 130  Q
    | || |||||| ||||    
T  38392085 tcctcactacagaatc 38392100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 42493536 - 42493603
Alignment:
Q  154 ccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaatgt 221  Q
    |||||||||||||| |||| ||| || |||||||||| |||||||| | ||| ||||||||| |||||    
T  42493536 ccaaaccacctaagcctagtttccacaatcttttctactataggtgttaccccaactctctccaatgt 42493603  T

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Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 45331674 - 45331776
Alignment:
Q  28 tagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttactacata 127  Q
    |||||| ||||||| || ||| || ||||||| || |||| |||| | |||||| | ||||||||   |||||||||| ||||||||| |||||||||||    
T  45331674 tagatctttcttaataggttccctaatagtttttctaggttttcctc-tgcctcgattgatttgatgaccctccatctgatctactctccttactacata 45331772  T
Q  128 atcc 131  Q
    ||||    
T  45331773 atcc 45331776  T

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Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 253
Target Start/End: Complemental strand, 79109 - 78988
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctag---gttctaccatcttttctattataggtgctccccgaa--ctctctctaa---tgtcatttctaat 231  Q
    |||||||| ||||||||||||||||||| ||||    |||||||||| |||||| | |||||| | ||||||  ||||||||||   |||  ||||||||    
T  79109 ttctctatacatgcccaaaccacctaagcctagtaatttctaccatcatttctactgtaggtgttacccgaatgctctctctaatgttgttgtttctaat 79010  T
Q  232 tatatcgcgtctagtcttacca 253  Q
      |||| |||||||||||||||    
T  79009 cctatcccgtctagtcttacca 78988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 190
Target Start/End: Complemental strand, 30748625 - 30748473
Alignment:
Q  36 tcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgg 135  Q
    |||||| |||||||||||  |||| || ||||||| || |||  ||||||||||||||| ||||  || | ||||||| | ||||||| | ||||  | |    
T  30748625 tcttaatagtttctcttacggtttttcaaggtctt-cctctgattctagtgatttgactaccctatatttgatctactttgcttactatagaatctacag 30748527  T
Q  136 gtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttcta 190  Q
    | | |||||| | ||||||||||||||||||| || | ||| |||||||||||||    
T  30748526 g-tcttctctctacatgcccaaaccacctaagccttgattccaccatcttttcta 30748473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 39388976 - 39388918
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctc-ttatagtttatccaggtc 68  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||||||| || |||||    
T  39388976 tccaactcattaatctctagatctttcctaatagtttctctttatagtttttctaggtc 39388918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 7103316 - 7103275
Alignment:
Q  160 cacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||||| |||| ||||||||||||||||| ||||||||||    
T  7103316 cacctaagcctagtttctaccatcttttctactataggtgct 7103275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 12491354 - 12491415
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| ||||||||||    
T  12491354 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgct 12491415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 17491743 - 17491804
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||||||| |  || ||||||| ||||||||||| ||||| || |||||||||    
T  17491743 tccaactcattaatctccaagtctttcttaatagtttctcttacagtttttctaggtcttcc 17491804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 18125224 - 18125159
Alignment:
Q  155 caaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaatg 220  Q
    ||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||||||||||||    
T  18125224 caaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctaatg 18125159  T

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Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 28169585 - 28169524
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||||||| | ||| ||| ||| ||||||||||||||||| |  |||||||||    
T  28169585 tccaactcattaatctcaaaatctttcctaatagtttctcttatagtttttttaggtcttcc 28169524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 216
Target Start/End: Original strand, 33666726 - 33666791
Alignment:
Q  151 tgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||||||||  |||||  || |||||||||||||||||  ||||||||| ||| ||||||||||    
T  33666726 tgcccaaaccatttaagtagagtttctaccatcttttctacgataggtgctaccccaactctctct 33666791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 41444551 - 41444612
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    |||| |||||||||||||  |||| ||| ||||||||||||| |||||||||| ||| ||||    
T  41444551 catgtccaaaccacctaaacctagtttccaccatcttttctactataggtgctaccccaact 41444612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 2776454 - 2776506
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||||||||||||||||| | || |||||||||| ||||||  |||||||||    
T  2776454 catgcccaaaccacctaagccgagtttctaccatcatttctacgataggtgct 2776506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 10109003 - 10108947
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtctt 70  Q
    ||||| |||||||||||||| ||||||  |||||||||||| |||| || |||||||    
T  10109003 aactcgttaatctctagatctttcttattagtttctcttatggtttttctaggtctt 10108947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 30559886 - 30559838
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||||||||||| ||| ||| | | |||||||||||||||||    
T  30559886 tccaactcattaatctctaaatctttcctgatagtttctcttatagttt 30559838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 36545215 - 36545139
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||| | |||  |||||||||    
T  36545215 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgttacccccactctctct 36545139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 40813390 - 40813314
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||| ||||  |||  |||||||| |||||||| |||||||||| |||  |||||||||    
T  40813390 ttctctctacatgcccaaaccatctaaacctattttctaccaacttttctactataggtgctacccccactctctct 40813314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 45419396 - 45419317
Alignment:
Q  43 agtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttacta 123  Q
    ||||||||||||||||| || ||||||||| | | |||||   ||| |||||| ||||||||| ||||||||||| |||||    
T  45419396 agtttctcttatagtttttctaggtcttcctc-tacctcttcagatctgactctcctccatctgatctactcttcatacta 45419317  T

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Target: chr4 (Bit Score: 99; Significance: 6e-49; HSPs: 94)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 10209239 - 10208982
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtct-tccccctgcctctagtgatttgactcccct 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||  |||||| || ||||| || |||||| |||    
T  10209239 catgtctttctccaactcattaatctctagatccttcttaatagtttctcttatagtttttctaggtctccccccctaccactagtcatatgactctcct 10209140  T
Q  100 ccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    |||||| ||||||||| ||||||| | ||| | | || | |||||  | ||||||||||||| |||||| ||| |||| |||||||||||| |||||||     
T  10209139 ccatctgatctactctccttactaaaaaattcacagg-tcttctcgctacatgcccaaaccaactaagtttagtttctgccatcttttctactataggtt 10209041  T
Q  200 ctccccgaactctct-ctaatgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    || ||| ||||||||  |  |||||||||||||| |||| | |||||||||||||||||    
T  10209040 ctaccccaactctctaatgttgtcatttctaattctatcccatctagtcttaccacaca 10208982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 31897507 - 31897694
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| || ||||| | ||||| ||||||||||| |||||||||||    
T  31897507 catgtctttctccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtc-tacccctacctctagtgatctgactcccctc 31897605  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttcta 190  Q
    ||||||||| ||||| || |||||| ||||| | || | | |||| | ||||| ||||||||| |||||||| |||||||||||||||||    
T  31897606 catctaatcgactctcctaactacagaatccacagg-tctgctctctacatgcgcaaaccacccaagtctagtttctaccatcttttcta 31897694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 46372227 - 46372004
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| || ||||| | ||||| ||||||||||| || ||||||||    
T  46372227 catgtctttctccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtc-tacccctacctctagtgatctggctcccctc 46372129  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
     |||| |||| ||||||||| |||| ||||| |  | | |||||| | ||||| |||||||||||||||||| |||||| || ||||| | |||||||||    
T  46372128 tatctgatctgctcttcttagtacagaatccacatg-tcttctctctacatgcacaaaccacctaagtctagtttctacaatattttcgactataggtgc 46372030  T
Q  201 tccccgaactc--tctctaatgtcat 224  Q
    | ||| |||||  |||||||||||||    
T  46372029 taccccaactctatctctaatgtcat 46372004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 26356811 - 26356626
Alignment:
Q  12 ccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatcta 111  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||| ||||| |||||||||||||||||||||||||||  |||||    
T  26356811 ccaactcattaatctctagatccttcataacagtttctcttatagtttttctaggtctt-cccctacctctagtgatttgactcccctccatccgatcta 26356713  T
Q  112 ctcttcttactacataatccgcgggt-ttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    |||| |||||||||  | || |  || || |||||| |  |||||||||||||||||||||  ||||||||||||||||| ||||||||    
T  26356712 ctctccttactacaatacccacatgtcttctctctaag--tgcccaaaccacctaagtctattttctaccatcttttctactataggtg 26356626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 35555729 - 35555939
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| |||||||||    |||||| ||||||||||||||||| || |||||| |||| | ||||||||||    |||| ||||    
T  35555729 catgtctttctccaactcatttatctctagac---tcttaatagtttctcttatagtttttctaggtctacccc-tacctctagtgacccaactctcctc 35555824  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
     |||||||||||||| || |||||| ||||| | ||| || |||| |  ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  35555825 tatctaatctactctcctaactacagaatccacaggtctt-ctctctaaatgcccaaaccacctaagtctagtttctaccatcttttctactataggtgc 35555923  T
Q  201 tccccgaactctctct 216  Q
    | ||||||||||||||    
T  35555924 tacccgaactctctct 35555939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 42285782 - 42285972
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||||  ||||| || || |||||| |||||  ||||||||||| |||||||||||    
T  42285782 catgtctttctccaactcatttatctctagatccttcctaatagtttct--tatagcttttctaggtctaccccca-cctctagtgatctgactcccctc 42285878  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattatag 196  Q
    || || |||| ||||||| |||||| ||||| | ||| || |||||| |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  42285879 ca-ctgatctgctcttctgactacagaatccacaggtctt-ctctatacatgcccaaaccacctaagtctagtttctaccatcttttctactatag 42285972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 31961345 - 31961514
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||| || ||||| | ||||| ||||||||||||||||||| |||    
T  31961345 catgtctttctccaactcatttatctctagatctttcctaatagtttctcttatagtttttctaggtc-tacccctacctctagtgatttgactcctctc 31961443  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctag 172  Q
    ||||||||| ||||| || |||||| ||||| |  | | |||||| | ||||||||||||||| ||||||||    
T  31961444 catctaatccactctcctaactacagaatccacaag-tcttctctctacatgcccaaaccacccaagtctag 31961514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 17900683 - 17900424
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccag-gtcttccccctgcctctagtgatttgactcccct 99  Q
    ||||||||||| ||||||||| ||||||| ||| ||| | | ||||||||||| ||||| || |  | |   ||||| |||||| |||| ||||||| ||    
T  17900683 catgtctttctacaactcatttatctctatatctttcctgatagtttctcttaaagtttttctacagaca--cccctacctctaatgatctgactcctct 17900586  T
Q  100 ccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    |||||| ||||||||| ||  ||||||||||| | ||| || |||| | | |||||||||||| | ||||||| ||||||| ||||||||| ||||||||    
T  17900585 ccatctgatctactctcctatctacataatccacaggtctt-ctctctacgtgcccaaaccacatgagtctagtttctaccgtcttttctactataggtg 17900487  T
Q  200 ctccccgaactc--tctctaat---gtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    || ||| |||||  ||||||||   ||||||||||||| |||| | |||||||||||||||||    
T  17900486 ctaccccaactccgtctctaatgtcgtcatttctaattttatcccatctagtcttaccacaca 17900424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 257
Target Start/End: Original strand, 25257730 - 25257917
Alignment:
Q  72 cccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtcta 171  Q
    ||||| ||||||||||||||  |||||||||||| ||||||||| ||||| |||  || | | ||| || |||| | ||||| |||||||||||||||||    
T  25257730 cccctacctctagtgatttgtgtcccctccatctgatctactctccttacaacagcattcacaggtctt-ctctctacatgctcaaaccacctaagtcta 25257828  T
Q  172 ggttctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    | |||||||||||||| |||| |||||| | ||  ||||||||||||   |||||||||||||| ||||  |||||||||||| |||||    
T  25257829 gcttctaccatcttttatattgtaggtgttacctcaactctctctaatgttgtcatttctaattctatcatgtctagtcttactacaca 25257917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 54470400 - 54470151
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||| | || |||| || |||||||||||||| ||  |||||||    |||||||||| |||||||| | |||||| | || |    
T  54470400 tccaactcattaatctctagaactttattaatagattctcttatagtttttcttggtcttcttt-tgcctctagtaatttgactactctccatttgattt 54470302  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||| |||||||||||||   |  || || |||| | |||||||||||||| ||||||||| ||| ||||||||||||| |||||||||| ||| ||||    
T  54470301 actctccttactacataatttacatgtctt-ctctctacatgcccaaaccacttaagtctagtttccaccatcttttctactataggtgctaccccaact 54470203  T
Q  211 ctctct--aatgtc---atttctaattatatcgcgtctagtcttaccacaca 257  Q
    ||||||  |||||    ||||| ||| ||||| | |||||||||||||||||    
T  54470202 ctctctctaatgttgttatttcaaatcatatcccatctagtcttaccacaca 54470151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 42639109 - 42639312
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||  ||||| || || | |||| | | ||||||||||||||||||||||||||||||| |    
T  42639109 tccaactcattaatcgctagatctttcttaatagtttctcttgcagtttttctagatattcctc-tacctctagtgatttgactcccctccatctaattt 42639207  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    || |  ||||| ||| |||||    | | |||||| | |||| |||||||||||||| || | ||| ||||||||||||| |||||||||  ||| ||||    
T  42639208 accccccttaccacagaatccataag-tcttctctctacatgtccaaaccacctaagcctggtttccaccatcttttctactataggtgcaaccctaact 42639306  T
Q  211 ctctct 216  Q
    ||||||    
T  42639307 ctctct 42639312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 184
Target Start/End: Complemental strand, 47372844 - 47372673
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||||| |||| || |||  |||||||||||||||||   || |||| || | ||||||||||||||||||| |||||| ||||||||    
T  47372844 tccaactcattaatctctggatctttattagtagtttctcttatagttttctcaagtctacctc-tgcctctagtgatttgactaccctccgtctaatct 47372746  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatct 184  Q
    ||||||||| ||||| ||||| |||| | ||| || | |||||| |||||| | |||||||| ||| |||||||    
T  47372745 actcttcttcctacaaaatccacggg-tcttcgctctacatgcctaaaccatcgaagtctagtttccaccatct 47372673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 122
Target Start/End: Original strand, 7682002 - 7682109
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctact 113  Q
    ||||||||||||| |||||  ||||| | ||||||||||||||||| |||||||||| || |||||||||||||| ||||| ||||||||||||||||||    
T  7682002 aactcattaatctatagatttttcttgatagtttctcttatagtttttccaggtctt-cctctgcctctagtgatgtgactaccctccatctaatctact 7682100  T
Q  114 cttcttact 122  Q
     | ||||||    
T  7682101 ttccttact 7682109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 47147566 - 47147447
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||||| ||||||| |||||||  |||||||| || ||||||| || ||||||||||||||  |||| | |||||||| || |    
T  47147566 tccaactcattaatctctagatctttcttaatagtttcttctatagtttttctaggtctt-cctctgcctctagtgatccgactactctccatctgattt 47147468  T
Q  111 actcttcttactacataatcc 131  Q
    ||||| |||||||||||||||    
T  47147467 actctccttactacataatcc 47147447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 216
Target Start/End: Complemental strand, 44360287 - 44360077
Alignment:
Q  3 tgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctcca 102  Q
    |||||||||||||||||||   ||| ||||||||||| | ||||||||| ||||||| || | |||||| ||  ||  ||||||||||| ||||||||||    
T  44360287 tgtctttctccaactcattggcctcaagatccttcttgacagtttctctaatagtttttctaagtcttctccaggca-ctagtgatttgcctcccctcca 44360189  T
Q  103 tctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctc 202  Q
    | | ||||| | | ||||||||||  ||| |  || || |||| | ||||||||||| |||||| ||||| ||||||||||||||||| |||||||| |     
T  44360188 tatgatctattatccttactacatcgtccacatgtctt-ctctctacatgcccaaacaacctaa-tctagtttctaccatcttttctactataggtgata 44360091  T
Q  203 cccgaactctctct 216  Q
    ||| ||||||||||    
T  44360090 ccccaactctctct 44360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 51550328 - 51550496
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    |||||||||||| |||||||| ||||||||||||||| ||| ||  |||||||| |||| |||||||| | ||||| ||| ||||||| |||||||||||    
T  51550328 catgtctttctc-aactcatttatctctagatccttcctaatagcatctcttatggtttttccaggtc-tacccctacctttagtgatctgactcccctc 51550425  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctag 172  Q
    ||||| ||| ||||| ||| ||| | ||||| |    | |||||| | ||||||||||||||||||||||||    
T  51550426 catctgatcaactctccttgctagagaatccac-atatcttctctctacatgcccaaaccacctaagtctag 51550496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 78 - 188
Target Start/End: Complemental strand, 2589117 - 2589008
Alignment:
Q  78 cctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttct 177  Q
    |||||||| |||| |||||||||||||| ||||||||| || |||||| ||||| |  ||||| |||| | |||||| ||||||||||||||||| ||||    
T  2589117 cctctagtaatttaactcccctccatctgatctactctcctaactacagaatccacaagtttt-ctctctacatgcctaaaccacctaagtctagtttct 2589019  T
Q  178 accatcttttc 188  Q
    |||||||||||    
T  2589018 accatcttttc 2589008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 257
Target Start/End: Original strand, 51252677 - 51252797
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaat---gtcatttctaattatat 236  Q
    |||||| | |||||||| |||||||||| |||| ||| ||||||||||||| || ||||||| ||| |||||||||||||   ||||||||||||  |||    
T  51252677 ttctctctacatgcccataccacctaagcctagtttccaccatcttttctactagaggtgctaccccaactctctctaatgtagtcatttctaatcctat 51252776  T
Q  237 cgcgtctagtcttaccacaca 257  Q
    | ||||||||||||| |||||    
T  51252777 ctcgtctagtcttacgacaca 51252797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 33710117 - 33709914
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||||||||||  |||||| |||||||| ||| |||| |  | |  |||||| || |||||||||| ||||| |||||| ||| |||     
T  33710117 tccaactcattaatctctagatcagtcttaatagtttctcgtatggtttttataagcattcccc-tgtctctagtgatctgactaccctccttctgatcc 33710019  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    |||||  |||||||| ||||| | | || ||||||   |||||| |||||||||||  |||| ||| ||||||||||||| |||||||| | ||| ||||    
T  33710018 actctctttactacagaatccacag-ttcttctctccacatgcctaaaccacctaaacctagtttccaccatcttttctactataggtgttaccccaact 33709920  T
Q  211 ctctct 216  Q
    ||||||    
T  33709919 ctctct 33709914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 6478762 - 6478891
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    |||||||||||| |||||||| | ||||||||||||| ||| |||||||||| | |||| || ||||| | |||||  |||| ||||| | |||||| ||    
T  6478762 catgtctttctctaactcatttacctctagatccttcctaatagtttctcttgtcgtttttctaggtc-tacccctagctctggtgatctaactcccttc 6478860  T
Q  101 catctaatctactcttcttactacataatcc 131  Q
    ||||| ||||||||| || ||||||||||||    
T  6478861 catctgatctactctcctaactacataatcc 6478891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 45423665 - 45423563
Alignment:
Q  156 aaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctct-ctaatgtcatttctaattatatcgcgtctagtcttaccac 254  Q
    ||||||| |||||| || |||||||||||||||||||||||||||| ||  |||||| |  |  |||||||||||||| |||| ||||||||||||||||    
T  45423665 aaaccacgtaagtcaagtttctaccatcttttctattataggtgctacctcaactctataatgttgtcatttctaattctatcccgtctagtcttaccac 45423566  T
Q  255 aca 257  Q
    |||    
T  45423565 aca 45423563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 21879242 - 21879419
Alignment:
Q  11 tccaactcattaatctctagatccttctt-aaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatc 109  Q
    ||||||||||| ||||||||||| ||||| || ||||||||||||||||| | | |||||| || |  ||||| ||||||| ||| ||||||||||||||    
T  21879242 tccaactcattcatctctagatctttcttgaatagtttctcttatagttt-tacgggtctt-cctcgacctctggtgatttcactaccctccatctaatc 21879339  T
Q  110 tactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttcta 190  Q
    || ||| ||||||| | ||||  |  | | ||||||||||||| |||||| ||||||| | || ||| |||||||||||||    
T  21879340 tattctccttactaaagaatctacatg-tcttctctatgcatgtccaaactacctaagccgagtttccaccatcttttcta 21879419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 34233116 - 34233231
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctact 113  Q
    ||||||||||||||||| || || | || ||||||||| ||||||| || |||| |||| | ||||||||||||| ||||   ||||||||| |||||||    
T  34233116 aactcattaatctctaggtctttatgaatagtttctctgatagtttttctaggttttcctc-tgcctctagtgatctgacgatcctccatctcatctact 34233214  T
Q  114 cttcttactacataatc 130  Q
    || ||||||||||||||    
T  34233215 ctccttactacataatc 34233231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 4441046 - 4440839
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||||||  |||  |||||||| |||||||  | ||||||||| | | |||||  | | ||||||| ||||||| | ||||    
T  4441046 tccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctc-tacctcttttaacttgactctcctccatttgatct 4440948  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||||||||| |||  |||  ||||| || |||| |  |||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||    
T  4440947 actcttcttaccacagcatctacgggtctt-ctctctagatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctgcccccact 4440849  T
Q  211 ctctctaatg 220  Q
    ||||||||||    
T  4440848 ctctctaatg 4440839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 31959903 - 31960106
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||||||  ||| ||||||||| |||||||  | ||||||||| | | |||||  | | ||||||| ||||||| | ||||    
T  31959903 tccaactcattgacctctaaatcctttctaatagtttctctaatagttttcctaggtcttcctc-tacctcttttaacttgactctcctccatttgatct 31960001  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||||||||| ||   |||  ||||| || |||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||    
T  31960002 actcttcttaccacggcatctacgggtctt-ctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccact 31960100  T
Q  211 ctctct 216  Q
    ||||||    
T  31960101 ctctct 31960106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 2589265 - 2589146
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||||||||||| |||| | ||||||||||||  ||| || ||||| |  | || |||||||| |||| |||||||||||| | ||||    
T  2589265 tccaactcattaatctctagatccatcttgatagtttctcttatgctttttctaggtcgt-gctctacctctagtaatttaactcccctccatttgatct 2589167  T
Q  111 actcttcttactacataatcc 131  Q
    ||||| || |||||| |||||    
T  2589166 actctcctaactacagaatcc 2589146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 49738639 - 49738718
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactc 95  Q
    |||||||||||||| |||||||||||||||| ||||| | ||||||||| || |||||||     ||||||||||||||||||||    
T  49738639 tccaactcattaatttctagatccttcttaatagtttttattatagtttttctaggtctt-----tgcctctagtgatttgactc 49738718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 55029009 - 55028890
Alignment:
Q  16 ctcattaatctctagatccttcttaaaa-----gtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||||| ||||||| |     |||||||||||||||| || |  ||||||   ||||||||||||||||||| || | ||||| ||||    
T  55029009 ctcattaatctctagatcattcttaacataacagtttctcttatagtttttctaactcttccta-tgcctctagtgatttgactaccatgcatcttatct 55028911  T
Q  111 actcttcttactacataatcc 131  Q
    ||||||||||||||| |||||    
T  55028910 actcttcttactacagaatcc 55028890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 21945727 - 21945845
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||| || | ||| ||| ||| ||||||| | ||||||| || ||||||||| |  |||||||||||| |||||  ||||||||| ||||    
T  21945727 tccaactcattaatttccaaatctttcctaatagtttctatgatagtttttctaggtcttcctca-gcctctagtgatgtgactatcctccatctgatct 21945825  T
Q  111 actcttcttactacataatc 130  Q
    ||||| ||||||||| ||||    
T  21945826 actctccttactacagaatc 21945845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 268
Target Start/End: Original strand, 44047573 - 44047697
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct--aatgt---catttctaattatatcgcgtct 243  Q
    |||| |||||||||||||| |||| |||||||| |||||||| |||||||||| ||| ||||||||||  |||||   ||||||||||| |||| || ||    
T  44047573 catgtccaaaccacctaagcctagattctaccaccttttctactataggtgctaccccaactctctctctaatgttgtcatttctaattctatcccgcct 44047672  T
Q  244 agtcttaccacacactcaaggcaac 268  Q
    | || |||||| || |||| |||||    
T  44047673 aatcctaccacgcattcaatgcaac 44047697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 22420806 - 22420978
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||||| |||||| | ||||||  |||||||| || |  |||||||  ||||||||||||||||| |   |||||||| ||||    
T  22420806 tccaactcattaatctctagatctttcttata-gtttct--tatagtttttctaaatcttccct-tgcctctagtgatttgaatattctccatcttatct 22420901  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    |||||||||| |||| ||||  |  | | |||||| | |||| ||||| |||||||| |||| ||| |||||||||||    
T  22420902 actcttcttattacaaaatcttc-agatcttctctctacatgtccaaatcacctaagcctagcttccaccatcttttc 22420978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 28351752 - 28351639
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||| ||||||||| ||| ||| ||| ||||||||||||||||| || |||||||  | || ||||| || || |||||  ||||||||| ||||    
T  28351752 tccaactcaataatctctaaatctttcgtaatagtttctcttatagtttttctaggtctt-tctctacctcttgtaatctgactatcctccatctgatct 28351654  T
Q  111 actcttcttactaca 125  Q
    ||||| |||||||||    
T  28351653 actctccttactaca 28351639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 40018278 - 40018379
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| ||||||||||| ||||||| ||||| ||||||||||| || | |||||     ||||||||||||||||||| |||| ||||| ||||    
T  40018278 tccaactcattgatctctagatctttcttaacagtttttcttatagtttttctaagtctt-tatttgcctctagtgatttgactacccttcatctgatct 40018376  T
Q  111 act 113  Q
    |||    
T  40018377 act 40018379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 31459096 - 31459035
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||| | ||||||||||||||||||| |||  ||||||||||||||||| ||||||||||    
T  31459096 ttctctttacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgct 31459035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 21107185 - 21107066
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatc-taatc 109  Q
    ||||||| ||||||| ||| | | ||| ||| ||||||||||||||||| || ||||||| || |||| || |||||| ||||| ||||||||| | |||    
T  21107185 tccaactaattaatcactaaaactttcctaatagtttctcttatagtttttctaggtctt-ccgctgcatccagtgatctgactaccctccatcttgatc 21107087  T
Q  110 tactcttcttactacataatc 130  Q
     ||||| ||||||||||||||    
T  21107086 cactctccttactacataatc 21107066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 25967350 - 25967461
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||| || |||||||||||||| || |||| ||||||||||||||||  || | ||||| || ||| |||||||||||| |||  ||| ||||| ||||    
T  25967350 tccaattcgttaatctctagatcttttttaatagtttctcttatagttattcaaagtctt-cctctgtctctagtgatttaactatccttcatctgatct 25967448  T
Q  111 actcttcttacta 123  Q
    ||||| |||||||    
T  25967449 actctccttacta 25967461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 26024939 - 26024987
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||    
T  26024939 tccaactcattaatctctagatctttcttaatagtttctcatatagttt 26024987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 36557246 - 36557321
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||| |||||||||| ||||||||| ||||||||||||||||| ||| |||||| ||| ||||||||||    
T  36557246 ttctctctacattcccaaaccac-taagtctagtttctaccatcttttctactatgggtgctgccccaactctctct 36557321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 41192902 - 41192826
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||| |||| ||||||||||||| ||| ||||||||||||| | |||||||| ||| ||||||||||    
T  41192902 ttctctctacatgcacaaatcacctaagtctagtttccaccatcttttctactgtaggtgctaccccaactctctct 41192826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 48622759 - 48622876
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattatat 236  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| ||| |||||| |||  |||||||||||   ||||||| |||||  |||    
T  48622759 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatgggtgctacccccactctctctaatggtgtcattcctaatcctat 48622858  T
Q  237 cgcgtctagtcttaccac 254  Q
    |  |||||||||||||||    
T  48622859 catgtctagtcttaccac 48622876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 257
Target Start/End: Complemental strand, 50662454 - 50662333
Alignment:
Q  140 ttctctatgcatgcccaaa-ccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattata 235  Q
    |||||| | |||||||||| ||||||||| |||  ||| ||||||||||||| |||||||| | ||| ||||||||||||   ||||||||| |||  ||    
T  50662454 ttctctctacatgcccaaaaccacctaagcctactttccaccatcttttctactataggtgttgcccaaactctctctaatgctgtcatttccaatccta 50662355  T
Q  236 tcgcgtctagtcttaccacaca 257  Q
    || | | |||||||||||||||    
T  50662354 tctcatatagtcttaccacaca 50662333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 52569681 - 52569807
Alignment:
Q  89 ttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    ||||||| ||||||| | ||||||||||||||| ||   |||  ||||| || |||| | ||||||||||||| ||||| |||  |||||||| ||||||    
T  52569681 ttgactctcctccatttgatctactcttcttaccacggcatctacgggtctt-ctctctacatgcccaaaccatctaagcctattttctaccaacttttc 52569779  T
Q  189 tattataggtgctccccgaactctctct 216  Q
    || |||||||||| |||  |||||||||    
T  52569780 tactataggtgctacccccactctctct 52569807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 56375406 - 56375280
Alignment:
Q  89 ttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    ||||||| ||||||| | ||||||||||||||| ||   |||  ||||| || |||| | ||||||||||||| ||||| ||   |||||||| ||||||    
T  56375406 ttgactctcctccattttatctactcttcttaccacggcatctacgggtctt-ctctctacatgcccaaaccatctaagcctgttttctaccaacttttc 56375308  T
Q  189 tattataggtgctccccgaactctctct 216  Q
    ||||||||||||| |||  |||||||||    
T  56375307 tattataggtgctacccctactctctct 56375280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 26025008 - 26025081
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagt 85  Q
    ||||||||||||||||||||||| ||||||| ||||||||  | |||||  ||||||||| || |||||||||||    
T  26025008 tccaactcattaatctctagatctttcttaatagtttctcaaaaagttttaccaggtctt-cctctgcctctagt 26025081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 30853534 - 30853445
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccat 103  Q
    |||||||||||||| |||||  ||| ||| ||||||||||||||||| || | ||| ||||  ||||||| ||||||||||| ||||||||    
T  30853534 caactcattaatctttagatttttcataatagtttctcttatagtttttctaagtc-tccctttgcctcttgtgatttgactaccctccat 30853445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 31403123 - 31403200
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatt 89  Q
    ||||||| ||||||||||||||| ||| ||| ||||| ||||||||||| || || |||||| || |||||||||||||    
T  31403123 tccaactaattaatctctagatctttcataatagtttttcttatagtttctctagatcttcctcc-gcctctagtgatt 31403200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 45569098 - 45569175
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatt 89  Q
    ||||||||||| ||||||||||  ||||||| ||||||||||||| | | || ||||||| || |||||||||||||||    
T  45569098 tccaactcattgatctctagatttttcttaatagtttctcttataatgtttctaggtctt-cctctgcctctagtgatt 45569175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 50680933 - 50680875
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtct 69  Q
    ||||||||||||||||||||||| |||| || | ||||||||||||||| || ||||||    
T  50680933 tccaactcattaatctctagatctttctaaataatttctcttatagtttttctaggtct 50680875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 8459126 - 8459242
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctac 112  Q
    |||||| |||||||||||||  ||||||| ||||| |||| |||||| |  ||||||| || |||||| ||||||||||||| | |  ||| ||||||||    
T  8459126 caactctttaatctctagatttttcttaatagtttatcttttagtttttttaggtctt-cctctgcctttagtgatttgactactcctcatgtaatctac 8459224  T
Q  113 tcttcttactacataatc 130  Q
    ||| |||| |||| ||||    
T  8459225 tctccttattacagaatc 8459242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 31043265 - 31043204
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||| |||||||||  ||||||||    
T  31043265 tccaactcattaatctctaaatctttcctaatagtttctcttttagtttatctgggtcttcc 31043204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 35690461 - 35690357
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctact 113  Q
    |||||||||| ||||| ||  ||| ||| ||||||||||||||||| || ||||||| || || |||||  |||| |||||  ||||||||||||| |||    
T  35690461 aactcattaacctctaaatttttcgtaatagtttctcttatagtttttctaggtctt-cctctacctcttttgatctgactttcctccatctaatccact 35690363  T
Q  114 cttctt 119  Q
    ||||||    
T  35690362 cttctt 35690357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 37042753 - 37042798
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatag 56  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  37042753 tccaactcaataatctctagatctttcttaatagtttctcttatag 37042798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 42293357 - 42293402
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||||    
T  42293357 aactcattaatttctagatctttcttaatagtttctcttatagttt 42293402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 46715546 - 46715650
Alignment:
Q  97 cctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattatag 196  Q
    ||||||| | ||||||||| ||| ||||||||||| |  | | |||||| | |||||||| |||||||||| |||| ||| |||||||||||||  ||||    
T  46715546 cctccatatgatctactctccttgctacataatccacatg-tcttctctctacatgcccacaccacctaagcctagtttccaccatcttttctacaatag 46715644  T
Q  197 gtgctc 202  Q
    ||||||    
T  46715645 gtgctc 46715650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 55809079 - 55809140
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||| ||||| ||| ||| ||| ||||||||||||||||| || |||||||||    
T  55809079 tccaactcattaacctctaaatctttcctaacagtttctcttatagtttttctaggtcttcc 55809140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 934520 - 934568
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||||||||||||| | ||||||| ||||||||| |||||||    
T  934520 tccaactcattaatctctagaactttcttaatagtttctctaatagttt 934568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 10775654 - 10775714
Alignment:
Q  156 aaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||||||| |||||| ||||||||||||||||| |||||||| | ||| ||| ||||||    
T  10775654 aaaccacctatgtctagtttctaccatcttttctactataggtgttaccccaacactctct 10775714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 28236249 - 28236169
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaatg 220  Q
    |||||| | ||||||||||||| ||||| |||  ||| |||| |||||||| |||||||||| |||  |||||||||||||    
T  28236249 ttctctctacatgcccaaaccatctaagcctattttccaccaacttttctactataggtgctacccccactctctctaatg 28236169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 29182645 - 29182605
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctct 51  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  29182645 tccaactcattaatctctagatacttcttaatagtttctct 29182605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 33191064 - 33191140
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||| | |||||||||  |||||||| |||||||| |||||||||| |||  |||||||||    
T  33191064 ttctctctacatgcccaaacaatctaagtctattttctaccaacttttctactataggtgctacccccactctctct 33191140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 43433990 - 43433914
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||||||||    
T  43433990 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctct 43433914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 6843805 - 6843762
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagt 57  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||    
T  6843805 aactcattaatctctagatctttcttaatagtctctcttatagt 6843762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 7544615 - 7544654
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctctta 53  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  7544615 aactcattaatctctagatctttcttaatagtttctctta 7544654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 20047628 - 20047581
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtt 58  Q
    ||||||||||||||||||||||| |  |||| ||||||||||||||||    
T  20047628 tccaactcattaatctctagatcttctttaatagtttctcttatagtt 20047581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 20999191 - 20999132
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||| ||||||||| ||||||| ||||| | ||||||||| || |||||||||    
T  20999191 caactcattaaactctagatctttcttaatagtttatattatagtttttctaggtcttcc 20999132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 37488281 - 37488226
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtct 69  Q
    |||| |||||| |||||||| ||||||| ||||||||||||||||| || ||||||    
T  37488281 aacttattaatttctagatctttcttaatagtttctcttatagtttttctaggtct 37488226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 254
Target Start/End: Original strand, 37773676 - 37773785
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct-ccccgaactctctctaatg---tcatttctaattatatcgcgtcta 244  Q
    ||||||||||||| ||||| |||  |||||||  |||||||| |||||||||| ||||  |||||||||||||   |||||  ||||| ||||  |||||    
T  37773676 catgcccaaaccatctaagcctattttctaccgacttttctactataggtgctaccccttactctctctaatggtatcattcataattctatcatgtcta 37773775  T
Q  245 gtcttaccac 254  Q
    ||||||||||    
T  37773776 gtcttaccac 37773785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 38570972 - 38571039
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    ||||||||||||||||||| |||| ||| || ||||||| || |||||||||| ||| | ||||||||    
T  38570972 catgcccaaaccacctaagcctagtttccactatcttttgtactataggtgcttccccagctctctct 38571039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 38903810 - 38903895
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctcc 101  Q
    ||||||||||||| ||| || ||||||| ||||||||||||||||| || ||||||| |  ||||||||||  |||||||| ||||||    
T  38903810 aactcattaatctttaggtctttcttaatagtttctcttatagttt-tctaggtctt-catctgcctctagccatttgactaccctcc 38903895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 44667335 - 44667437
Alignment:
Q  12 ccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatcta 111  Q
    ||||||| |||||||||||||  ||||| | |||||||  |||||||| || ||||||| |  |||||||||||||||||||| |  | ||||| |||||    
T  44667335 ccaactcgttaatctctagatttttcttgatagtttctaatatagtttttcgaggtctt-cttctgcctctagtgatttgactactatacatctgatcta 44667433  T
Q  112 ctct 115  Q
    ||||    
T  44667434 ctct 44667437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 45204928 - 45205041
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||| ||||| ||||| ||| ||| ||| ||||||||||||||||| || ||||||||| ||  |||||  |||| || ||| ||||||||| ||||    
T  45204928 tccaacttattaaactctaaatctttcctaatagtttctcttatagtttttctaggtcttcctcc-acctcttttgatctg-ctctcctccatctgatct 45205025  T
Q  111 actcttcttactacat 126  Q
    ||||||| ||| ||||    
T  45205026 actcttcgtacaacat 45205041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 49987577 - 49987519
Alignment:
Q  35 ttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgact 94  Q
    ||||||| ||||||||||||||||| || ||||||| || ||||||||||||| ||||||    
T  49987577 ttcttaatagtttctcttatagtttttctaggtctt-cctctgcctctagtgaattgact 49987519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 53540483 - 53540401
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgact 94  Q
    ||||||||||||||||| |  || ||| ||| ||||| ||||||||||| || ||||||| || |||||||||||||| |||||    
T  53540483 tccaactcattaatctccaagtctttcctaatagtttatcttatagtttttctaggtctt-cctctgcctctagtgatctgact 53540401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 20105771 - 20105809
Alignment:
Q  219 tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  20105771 tgtcatttctaatcatatctcgtctagtcttaccacaca 20105809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 21106966 - 21106928
Alignment:
Q  219 tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  21106966 tgtcatttctaattctatcacgtctagtcttaccacaca 21106928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 21214673 - 21214723
Alignment:
Q  9 tctccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    |||||||||||||| ||| |||| | ||||||| |||||||||||||||||    
T  21214673 tctccaactcattactctatagacctttcttaatagtttctcttatagttt 21214723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 39708626 - 39708517
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||||||  |||  ||||||||||||||||  | ||||||||| | | |||||  |||  |||||| ||||||||| ||||    
T  39708626 tccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctc-tacctcttttgacctgactctcctccatctgatct 39708528  T
Q  111 actcttcttac 121  Q
    |||||||||||    
T  39708527 actcttcttac 39708517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Original strand, 39754601 - 39754667
Alignment:
Q  150 atgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    ||||| ||||||||||||||||  |||||  |||||||||||||||||| || ||  ||||||||||    
T  39754601 atgcctaaaccacctaagtctaatttctataatcttttctattataggttctaccataactctctct 39754667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 44861014 - 44860933
Alignment:
Q  23 atctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatct 105  Q
    ||||||||||| ||| ||| |||||| |||||||||| || ||||||| ||  ||||||||||| ||||||| | ||||||||    
T  44861014 atctctagatctttcataatagtttcccttatagtttttcaaggtctt-cctttgcctctagtgttttgactacgctccatct 44860933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 55771708 - 55771662
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||||||||||||| | |||| ||||||| ||||||||||    
T  55771708 caactcattaatctctagatcttccttacaagtttcacttatagttt 55771662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 55835944 - 55835898
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||||||||||||| | |||| ||||||| ||||||||||    
T  55835944 caactcattaatctctagatcttccttacaagtttcacttatagttt 55835898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 2557761 - 2557822
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    |||||||| |||||||  ||||||||||||| ||||||||||| ||||| || || ||||||    
T  2557761 tccaactcgttaatcttcagatccttcttaatagtttctcttacagtttttctagatcttcc 2557822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 8599033 - 8599090
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttc 71  Q
    ||||||||||  | |||||| ||||||| ||||||||||||||||| || ||||||||    
T  8599033 aactcattaacatttagatctttcttaatagtttctcttatagtttttctaggtcttc 8599090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10775548 - 10775605
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtt 58  Q
    |||||||||||||||||||||  | |||||||||||||| |  |||||||| ||||||    
T  10775548 catgtctttctccaactcattgttttctagatccttcttgatggtttctctaatagtt 10775605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 38266197 - 38266136
Alignment:
Q  155 caaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||||||||||  ||| ||| |||||| | ||||||||||||||| ||| ||||||||||    
T  38266197 caaaccacctaagcttagtttccaccatcctctctattataggtgctaccctaactctctct 38266136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 42037861 - 42037798
Alignment:
Q  208 actctctctaatgtcat---ttctaattatatcgcgtctagtcttaccacacactcaaggcaac 268  Q
    |||||||||||||||||   |||||||| |||| | ||| ||||||||||||| ||||||||||    
T  42037861 actctctctaatgtcatcacttctaattctatcacatcttgtcttaccacacaatcaaggcaac 42037798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 51009206 - 51009318
Alignment:
Q  17 tcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactctt 116  Q
    ||||||||||| | |  |||||||| |||||| |||| ||||| ||  |||||||| ||  | ||||||||||| ||| |||||||||| ||| |||||     
T  51009206 tcattaatctcaacactcttcttaatagtttcccttaaagtttttctcggtcttcctcca-cgtctagtgatttaactaccctccatcttatcaactctc 51009304  T
Q  117 cttactacataatc 130  Q
     |||||||||||||    
T  51009305 attactacataatc 51009318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 53707860 - 53707799
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| ||||||||||    
T  53707860 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgct 53707799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 190
Target Start/End: Complemental strand, 1380494 - 1380383
Alignment:
Q  78 cctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttct 177  Q
    |||||||| |||| ||| | ||| |||||||||||| | ||||||||| ||||  | |||||| |||| | | ||||||||||||||||| | || ||||    
T  1380494 cctctagtaatttaactacactctatctaatctactgtccttactacaaaatctacaggtttt-ctctctacgtgcccaaaccacctaagccgagtttct 1380396  T
Q  178 accatcttttcta 190  Q
    | ||| |||||||    
T  1380395 atcatgttttcta 1380383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 11389851 - 11389799
Alignment:
Q  78 cctctagtgatttgactcccctccatctaatctactcttcttactacataatc 130  Q
    ||||||||||||||||| |  ||||||| ||||||||| ||||||||| ||||    
T  11389851 cctctagtgatttgactactttccatcttatctactctccttactacagaatc 11389799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 27450411 - 27450475
Alignment:
Q  156 aaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaatg 220  Q
    |||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||||||||||||    
T  27450411 aaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctctaatg 27450475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 33227275 - 33227199
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||| | ||||| |||  |||||||| |||||||| |||||||||| |||  |||||||||    
T  33227275 ttctctctacatgcccaaacaatctaagcctattttctaccaacttttctactataggtgctacccccactctctct 33227199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 36557190 - 36557230
Alignment:
Q  72 cccctgcctctagtgatttgactcccctccatctaatctac 112  Q
    ||||| |||||||| || |||||||||||||||||||||||    
T  36557190 cccctacctctagtcatctgactcccctccatctaatctac 36557230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 40018407 - 40018475
Alignment:
Q  148 gcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    ||||||||||||||| |||| | || |||||||||||||| ||  ||||||||| ||| || |||||||    
T  40018407 gcatgcccaaaccacataagccaagtttctaccatcttttttacgataggtgctaccccaattctctct 40018475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 9e-45; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 11581647 - 11581434
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||| ||||||||| |||| |||||| ||||||| ||||||||||||||||| || ||||||| | | | |||||||||||||||||| |||     
T  11581647 catgtctttcttcaactcatttatctatagatctttcttaatagtttctcttatagtttttctaggtctt-ctcatacctctagtgatttgactcaccta 11581549  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    ||||| || |||||||||||||||||||| | |  | | |||||| | ||| |||||||||||||||||||| ||||||||||||||||||| ||||| |    
T  11581548 catctgatgtactcttcttactacataattcacatg-tcttctctctacatacccaaaccacctaagtctagtttctaccatcttttctattgtaggttc 11581450  T
Q  201 tccccgaactctctct 216  Q
    | ||| ||||||||||    
T  11581449 taccctaactctctct 11581434  T

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Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31454304 - 31454524
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgc--ctctagtgatttgactcccc 98  Q
    ||||||||||||||| |||||||| ||||||||||  |||| |||||| |||||||||| || ||||| ||||| | |  |||||  |||||||||||||    
T  31454304 catgtctttctccaattcattaatatctagatcctaattaatagtttcccttatagtttttctaggtcatcccc-tacatctctaaagatttgactcccc 31454402  T
Q  99 tccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggt 198  Q
    ||||||| ||||||||| || |||||| |||||||   || |||||| | ||||| ||||||||| |||||||| ||||||||||||||||| |||||||    
T  31454403 tccatctgatctactctcctaactacagaatccgc-atttcttctctctacatgcacaaaccacc-aagtctagtttctaccatcttttctactataggt 31454500  T
Q  199 gctccccga-actctctctaatgt 221  Q
    |||  || | ||||||||||||||    
T  31454501 gctaaccaacactctctctaatgt 31454524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 26990416 - 26990303
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||||| ||||||| || ||||||| ||||| |||| ||||||||||||||||||    
T  26990416 catgtctttctccaactcattgatctctagatccttcttgatagtttctctaatagtttttctaggtctt-cccctacctcgagtgatttgactcccctc 26990318  T
Q  101 catctaatctactct 115  Q
    |  | ||||||||||    
T  26990317 cgaccaatctactct 26990303  T

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Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 37351606 - 37351488
Alignment:
Q  5 tctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatc 104  Q
    |||||||||| |||||||||||||||||| ||||| |  |||||||| ||||||| || ||||||| ||||| |||||||||||||| ||||| ||||||    
T  37351606 tctttctccatctcattaatctctagatctttcttgattgtttctctaatagtttttctaggtctt-cccctacctctagtgatttgcctcccttccatc 37351508  T
Q  105 taatctactcttcttactac 124  Q
    | ||||||||| ||||||||    
T  37351507 tgatctactctccttactac 37351488  T

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Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 21200741 - 21200564
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||| |||||||| |||| || ||||| ||| ||||||| || ||||||| || || || |||||||||||||| | |||||| | ||||    
T  21200741 tccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctt-cctctccccctagtgatttgactactctccatgtgatct 21200643  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttcta 190  Q
    ||||| |||||| || ||||  |  | | |||||| | |||||||||||||||||||||||| ||| |||||||||||||    
T  21200642 actctccttactgcagaatctacatg-tcttctctctacatgcccaaaccacctaagtctagtttccaccatcttttcta 21200564  T

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Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 107 - 257
Target Start/End: Original strand, 36820145 - 36820297
Alignment:
Q  107 atctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccg 206  Q
    |||||| || ||||||||||||||   |||| || |||| | |||| | |||||||||||| |||| ||| ||||||||| ||| |||||||||| |||     
T  36820145 atctaccctccttactacataatctatgggtctt-ctctttacatgtctaaaccacctaagcctagtttccaccatctttgctaatataggtgctacccc 36820243  T
Q  207 aactctctctaat---gtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    |||||||||||||   ||||||||||||  |||| |||||||||||||||||||    
T  36820244 aactctctctaatgtcgtcatttctaatcctatctcgtctagtcttaccacaca 36820297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 46431768 - 46431882
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||| || || |||     |||||||||||||||||| |  ||||||||| ||||    
T  46431768 tccaactcattaatctctagatcttttttaatagtttctcttatagtttttctagttct-----ctgcctctagtgatttgagtatcctccatcttatct 46431862  T
Q  111 actcttcttactacataatc 130  Q
    ||||| ||||||||| ||||    
T  46431863 actctccttactacagaatc 46431882  T

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Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 19737110 - 19736943
Alignment:
Q  92 actcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctat 191  Q
    |||| ||||||||| |||||||||||||||||||  |||  | ||| || |||| ||||||| ||||||||||||  |||  |||||||||||||||||     
T  19737110 actctcctccatctgatctactcttcttactacaacatctacaggtctt-ctctctgcatgctcaaaccacctaaacctattttctaccatcttttctac 19737012  T
Q  192 tataggtgct-ccccgaactctctct--aatg---tcatttctaattatatcgcgtctagtcttaccac 254  Q
    |||||||||| |||| ||||||||||  ||||   ||| |||||||  |||| ||||||||||||||||    
T  19737011 tataggtgctgcccccaactctctctctaatgatttcacttctaatcgtatcccgtctagtcttaccac 19736943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 27893292 - 27893221
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    |||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||| | || |||||||||    
T  27893292 catgtctttctccaactcattaatctctaggtcctttttaatagtttctcttatagtctttctaggtcttcc 27893221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 257
Target Start/End: Original strand, 39600770 - 39601019
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||| ||||| ||| ||||||| ||||||||||||||||| || ||||||| || || ||||| |  || |||||  |||| |||| ||||    
T  39600770 tccaactcattaacctctaaatctttcttaatagtttctcttatagtttttctaggtctt-cctctacctcttgcaatctgactatcctcgatctgatct 39600868  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaa-- 208  Q
    ||||| ||  ||||| ||||  | || | |||||| | |||||| ||||||||||||  |   ||| ||||||||||||| ||||||| || ||| ||      
T  39600869 actctcctcgctacagaatctacagg-tcttctctttacatgccaaaaccacctaagcttgttttccaccatcttttctactataggtactaccccaact 39600967  T
Q  209 ctctctctaa---tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    ||||||||||   |||||||||||||  |||| | |||||||||||||||||    
T  39600968 ctctctctaatgttgtcatttctaatcttatcccatctagtcttaccacaca 39601019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 50960726 - 50960922
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||| | | ||| ||| ||||||||||| | ||| || ||||||||| | | |||||   |||  ||||| ||||||||| ||||    
T  50960726 tccaactcattaatctctaaacctttcctaatagtttctcttaaattttttctaggtcttcctc-tccctctttcgatccgactctcctccatctgatct 50960824  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||||||| |||||  ||  |     | |||||| | ||||||||||||||||||| |||  ||||||||||||||||| |||||||||| ||| ||||    
T  50960825 actcttctttctacaacatagg-----tcttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctaccccaact 50960919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 54128572 - 54128325
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctctta-tagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatc 109  Q
    ||||||||||| | ||||| ||| ||| | | ||||||||||| |||||| || ||||||||| | | |||||   ||| |||||  ||||||||| |||    
T  54128572 tccaactcattgacctctaaatctttccttatagtttctcttaatagtttttctaggtcttcctc-tacctctttcgatctgactaacctccatctgatc 54128474  T
Q  110 tactcttcttactacataatccgcgggt-ttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccga- 207  Q
    |||||| | |||| ||| |||  | ||| |||||||||  ||||||||||||||||||| |||  ||||||||||||||||| |||||||||| ||| |     
T  54128473 tactctacgtactgcatcatctacaggtcttttctcta--catgcccaaaccacctaagcctattttctaccatcttttctactataggtgctaccccaa 54128376  T
Q  208 -actctctctaa---tgtcatttctaattatatcgcgtctagtcttaccac 254  Q
     |||||||||||   |||||||  ||||  ||||||||||||| |||||||    
T  54128375 cactctctctaatggtgtcattcataatcctatcgcgtctagttttaccac 54128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 216
Target Start/End: Complemental strand, 19758013 - 19757889
Alignment:
Q  92 actcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctat 191  Q
    |||| ||||||||| |||||||||||||||||||  |||  | ||| || |||| ||||||| ||||||||||||  |||  |||||||||||||||||     
T  19758013 actctcctccatctgatctactcttcttactacaacatctacaggtctt-ctctctgcatgctcaaaccacctaaacctattttctaccatcttttctac 19757915  T
Q  192 tataggtgct-ccccgaactctctct 216  Q
    |||||||||| |||| ||||||||||    
T  19757914 tataggtgctgcccccaactctctct 19757889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 3987113 - 3987037
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||| |||||||||||||||||||| ||||||||||||||||| |||||||| | ||| ||||||||||    
T  3987113 ttctctctacattcccaaaccacctaagtctagtttctaccatcttttctactataggtgataccccaactctctct 3987037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 37598259 - 37598377
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||||   |||||| ||||||||||| ||||| || ||||| ||  | ||||||| ||||||| ||| | || ||||| ||||    
T  37598259 tccaactcattaatctctagatatatcttaatagtttctctta-agtttttctaggtcatcttc-tgcctctggtgatttaactacgcttcatctgatct 37598356  T
Q  111 actcttcttactacataatcc 131  Q
    |||||||||||||||||||||    
T  37598357 actcttcttactacataatcc 37598377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 41087946 - 41087712
Alignment:
Q  2 atgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccc--cctgcctctagtgatttgactcccct 99  Q
    |||||||| | ||||||||||||||||| ||||||||||| | ||||| ||||||||| |||||||||||||    | | | |||| |||| |||| | |    
T  41087946 atgtctttattcaactcattaatctctaaatccttcttaataatttcttttatagtttttccaggtcttcccttattacatttagtaatttaactcacat 41087847  T
Q  100 ccatctaatctactcttcttactacataatccgcgggt-ttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggt 198  Q
    | |||||||||||||||  |||||||||||   |  || || |||||||  || || ||||||| ||||||||  || ||||||||||| ||||||  ||    
T  41087846 ctatctaatctactctttatactacataattaacaagtcttctctctat--ataccgaaaccacttaagtctaatttttaccatcttttatattatttgt 41087749  T
Q  199 gctccccgaactctctctaa---tgtcatttctaatt 232  Q
    ||| ||  ||||||||||||   ||||||||||||||    
T  41087748 gctacctcaactctctctaacattgtcatttctaatt 41087712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 199
Target Start/End: Original strand, 48953589 - 48953697
Alignment:
Q  91 gactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttcta 190  Q
    ||||| ||||||||| ||||||||||||||| |||  ||| |||||| ||||||| | |||||||||| || |||||| ||  |||||||| ||||||||    
T  48953589 gactctcctccatctgatctactcttcttacgacaacatctgcgggtctttctctttacatgcccaaatcatctaagtttattttctaccaacttttcta 48953688  T
Q  191 ttataggtg 199  Q
     ||||||||    
T  48953689 ctataggtg 48953697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 49503770 - 49503846
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||||||||| |||  ||||||||||||||||| |||||||||| || |||||||||||    
T  49503770 ttctctctacatgcccaaaccacctaagcctattttctaccatcttttctactataggtgctacctgaactctctct 49503846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 257
Target Start/End: Original strand, 45289180 - 45289432
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||||||    || |||| || ||  |||| || || | |||  ||||||||| ||||    
T  45289180 tccaactcattaatctctaaatctttcctaatagtttctcttatagttttcatagatctt-cctctatctcttgtaatctaactatcctccatctgatct 45289278  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctatt--ataggtgctccccgaa 208  Q
    ||||||||||||||| ||||  |  | | |||||| | | ||||||||||||||||| |||  ||| ||||||||||||| |  ||||||||| ||| ||    
T  45289279 actcttcttactacaaaatctacaag-tgttctctctacgtgcccaaaccacctaagcctattttccaccatcttttctactgaataggtgctaccccaa 45289377  T
Q  209 ----ctctctctaa--tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
        ||||||||||  |||||||||||||  |||| |||||||||||| ||||||    
T  45289378 ctctctctctctaatgtgtcatttctaatcttatcccgtctagtcttatcacaca 45289432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 26490372 - 26490264
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaat---gtcatttctaattatatcgcgtctag 245  Q
    |||| |||||||||||||| |||  ||||||||||||||||| |||||||||| ||  |||||| ||||||   |||||| ||||| ||||| ||||| |    
T  26490372 catgtccaaaccacctaagcctattttctaccatcttttctactataggtgctacctcaactctgtctaatgacgtcattgctaatcatatcccgtcttg 26490273  T
Q  246 tcttaccac 254  Q
    |||||||||    
T  26490272 tcttaccac 26490264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 201
Target Start/End: Complemental strand, 38431009 - 38430853
Alignment:
Q  43 agtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttc 142  Q
    |||||||||| |||||| || | ||||||| | | |||||  ||||||||||| ||||||||| ||||||||||| |||||||  ||| || || |  ||    
T  38431009 agtttctcttgtagtttttctaagtcttcctc-tacctcttttgatttgactctcctccatctgatctactcttcatactacaacatctgcagg-tcgtc 38430912  T
Q  143 tctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||| | ||||||||| | ||||||| |||  ||||||||||||||||| ||||||||||    
T  38430911 tctctacatgcccaatcaacctaagcctattttctaccatcttttctactataggtgct 38430853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 256
Target Start/End: Complemental strand, 22902971 - 22902751
Alignment:
Q  31 atccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatc 130  Q
    ||||||||| | || ||||||||| |||| || |  |||||||| | | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||     
T  22902971 atccttctttatagcttctcttatggtttttctatatcttcccc-tacatctagtgatttaactcccctccatctgatctacttttcttactgcataatt 22902873  T
Q  131 cgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatc-ttttctattataggtgctccccgaactctctctaa---tgtcattt 226  Q
    | | ||    ||||    |||| |||||| |||||||||||| |||||||||| ||||| | |||||||||| | | ||||||||||||   | ||||||    
T  22902872 cacagg----tctc----catgtccaaacaacctaagtctagtttctaccatctttttcgactataggtgctactcaaactctctctaatattttcattt 22902781  T
Q  227 ctaattatatcgcgtctagtcttaccacac 256  Q
    |||||  |||||| | |||| |||||||||    
T  22902780 ctaatcctatcgcatatagtgttaccacac 22902751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 44443293 - 44443341
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||    
T  44443293 tccaactcatcaatctctagatcattcttaaaagtttctcttatagttt 44443341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 49841809 - 49841624
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||| |||||| || |||| ||||||||||||  ||| | | |||||||| | | |||||||| |||||||| |||| ||||| || |    
T  49841809 tccaactcattaatctttagatctttgttaatagtttctcttat--ttttttctggtcttcctc-tacctctagtaatttgactacccttcatctgattt 49841713  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||| ||||||| | ||  |   |  || ||||||  || ||||||||||||| ||||||| ||| ||||||||||||| ||||||||||    
T  49841712 actctccttactaaagaagtcaatgtcttctctcta--cacgcccaaaccaccttagtctagtttccaccatcttttctaatataggtgct 49841624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 28245553 - 28245427
Alignment:
Q  89 ttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    ||||||| ||||||| | || |||||||||||| ||   |||  |||| |||||||| | ||||||||||||| |||||||||  |||||||| ||||||    
T  28245553 ttgactctcctccatttgatatactcttcttaccacggcatctacggg-ttttctctctacatgcccaaaccatctaagtctattttctaccaacttttc 28245455  T
Q  189 tattataggtgctccccgaactctctct 216  Q
    || |||||||||| |||  |||||||||    
T  28245454 tactataggtgctacccccactctctct 28245427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 36820067 - 36820114
Alignment:
Q  12 ccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  36820067 ccaactcattaatctctagatctttcttaatagtttctcttatagttt 36820114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 43255078 - 43254976
Alignment:
Q  17 tcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactctt 116  Q
    ||||| ||||||||||||||| | | ||||||||| ||||||| || ||||| | ||||| ||||||||||| ||||| |||||||||| | |||||||     
T  43255078 tcatttatctctagatccttcctgatagtttctctcatagtttttctaggtc-tacccctacctctagtgatctgacttccctccatctgaactactctc 43254980  T
Q  117 ctta 120  Q
    ||||    
T  43254979 ctta 43254976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 2340804 - 2340854
Alignment:
Q  9 tctccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||||||    
T  2340804 tctccgactcattaatctctagatctttcttaatagtttctcttatagttt 2340854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 31261063 - 31261132
Alignment:
Q  43 agtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactc 114  Q
    ||||||||||||||||| || ||||||| || ||||||||||||||||||||  ||||||||| ||||||||    
T  31261063 agtttctcttatagtttttctaggtctt-cctctgcctctagtgatttgact-acctccatctgatctactc 31261132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 31453040 - 31453111
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    |||||||||| |||| |||||||| |||||||||||||| | |||||||  ||||| ||||| |||||||||    
T  31453040 catgtctttcaccaattcattaatatctagatccttcttgatagtttcttatatagcttatctaggtcttcc 31453111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 31453154 - 31453229
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc-tattataggtgctccccgaactctct 214  Q
    |||||| | |||||| |||| |||||||||||| ||||||||||||||| || |||||||||| ||| ||||||||    
T  31453154 ttctctctacatgccaaaacaacctaagtctagtttctaccatcttttcttactataggtgctgccccaactctct 31453229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 257
Target Start/End: Complemental strand, 37228127 - 37227874
Alignment:
Q  5 tctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatc 104  Q
    ||||| || ||||||||||| ||||  || ||||||| |||||| ||||| |||| |  ||||||| | | ||||||| ||||||||||| |||||| ||    
T  37228127 tctttatctaactcattaatttctaagtctttcttaatagtttcccttatcgtttttataggtctttctc-tgcctctggtgatttgactaccctccgtc 37228029  T
Q  105 taatctactcttcttactacataatccgcgggt-ttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctcc 203  Q
    || || ||| | ||||||||||||||  |   | |||||||||  |||||  |||||||||||| | || |||  |||| |||||||  |||| |||| |    
T  37228028 tattcaactgtccttactacataatctacatctattttctcta--catgcagaaaccacctaagccgagtttccgccattttttctacgatagctgctac 37227931  T
Q  204 ccgaactctctctaat---gtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
     | |||||||||||||   ||||||||||||  |||   ||||||||||||||||||    
T  37227930 tccaactctctctaatgtggtcatttctaatcctatattgtctagtcttaccacaca 37227874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 190
Target Start/End: Complemental strand, 39235331 - 39235154
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||  |||| ||| ||| ||| ||||| || |||||||| |   |||||||| | | |||||  |||| |||||  ||||||||| ||||    
T  39235331 tccaactcattaacttctaaatctttcctaatagtttatcctatagtttttttgggtcttcctc-tacctcttttgatctgactttcctccatctgatct 39235233  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttcta 190  Q
    ||||||| |||||||  |||  | ||| || |||| | ||||||||||||||||||| |||  |||||||||||||||||    
T  39235232 actcttcgtactacaacatctacaggtctt-ctctctacatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 40982089 - 40982007
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgact 94  Q
    |||||| ||||||| |||||||| ||||||| |||| |||||||||||| || ||||||| ||  || ||||||||||||||||    
T  40982089 tccaacacattaatatctagatctttcttaatagttactcttatagtttttctaggtctt-cctttgtctctagtgatttgact 40982007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 42510105 - 42510291
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| || || | ||| ||| |||  |||||||| ||||||| || |||||||||   ||||||||||||| |||||  ||||||||| ||||    
T  42510105 tccaactcatttatttccaaatctttcctaatggtttctctgatagtttttctaggtcttcctt-tgcctctagtgatctgactatcctccatctgatct 42510203  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||| ||||| ||| ||||    || | |||||||  |||| |||||||||||||| |||  ||| || |||||||||| ||||||||||    
T  42510204 actctccttaccacaaaatctatagg-tcttctcta--catgtccaaaccacctaagcctattttccactatcttttctactataggtgct 42510291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 254
Target Start/End: Complemental strand, 27917627 - 27917519
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaat---gtcatttctaattatatcgcgtctag 245  Q
    |||| |||||||| ||||| |||  | ||||||||||||||| |||||||||| ||| |||| ||||||||   |||||| ||||| | ||| |||||||    
T  27917627 catgtccaaaccatctaagcctatttcctaccatcttttctactataggtgctaccccaactttctctaatggggtcattcctaatcaaatctcgtctag 27917528  T
Q  246 tcttaccac 254  Q
     ||||||||    
T  27917527 gcttaccac 27917519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 29475879 - 29475805
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgat 88  Q
    ||||||||||||||||||||||| ||||||| ||||  |||||||| || || ||||||| || ||||||||||||||    
T  29475879 tccaactcattaatctctagatctttcttaatagtt--tcttatagcttttctaggtctt-cctctgcctctagtgat 29475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 38060546 - 38060421
Alignment:
Q  90 tgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttct 189  Q
    |||||| ||||||| ||||||||||||||||| ||   |||  | ||| || |||| | |||| |||||||| ||||| |||  |||||||| |||||||    
T  38060546 tgactctcctccatttaatctactcttcttacgacggcatctacaggtctt-ctctctacatgtccaaaccatctaagcctattttctaccaacttttct 38060448  T
Q  190 attataggtgctccccgaactctctct 216  Q
    |||||||||||| |||  |||||||||    
T  38060447 attataggtgctacccccactctctct 38060421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 54365071 - 54365271
Alignment:
Q  18 cattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttc 117  Q
    |||||||||| |  || ||| ||| ||||||||||||||||| || ||||||||| | ||||||| ||| | |||||  ||| ||| | ||||||||| |    
T  54365071 cattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttcctc-tgcctctcgtggtctgactatccttcatttgatctactctcc 54365169  T
Q  118 ttactacataatccgcgggtttt-tctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||  | | ||||  | ||| || ||||| | ||||||||||||||||||| |||  |||  |||| ||||||| |||||||||| ||| ||||||||||    
T  54365170 ttataatagaatctacaggtattctctctctacatgcccaaaccacctaag-ctattttccgccatattttctactataggtgctaccccaactctctct 54365268  T
Q  217 aat 219  Q
    |||    
T  54365269 aat 54365271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 29375041 - 29374951
Alignment:
Q  98 ctccatctaatctactcttcttactacataatccgcgggt-ttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttct 189  Q
    ||||||||||||||| || ||||||||| ||||  | ||| |||||||||  || ||||||| |||||||||| || ||||||||||||||||    
T  29375041 ctccatctaatctacactccttactacaaaatctacaggtcttttctcta--caagcccaaatcacctaagtcgagtttctaccatcttttct 29374951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 40116557 - 40116618
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||||||||| |||  || ||| ||||||||||||||||| || |||||||||    
T  40116557 tccaactcattaatctctaaatctatcctaatagtttctcttatagtttttctaggtcttcc 40116618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 52138993 - 52138790
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||||||  |||  |||||||| |||||||  | ||||||||| | | |||||  | | ||||||| ||||||| ||||||    
T  52138993 tccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctc-tacctcttttaacttgactctcctccatttaatct 52138895  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    | ||||||||| ||   |||  | ||| || |||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||    
T  52138894 attcttcttaccacggcatctacaggtctt-ctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccact 52138796  T
Q  211 ctctct 216  Q
    ||||||    
T  52138795 ctctct 52138790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 6988094 - 6988016
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttc--cccctgcctctagtgatttga 92  Q
    ||||||||||||||||||||||| || ||||     ||||||||||||| || ||||||||  || ||||||||||||||||||    
T  6988094 tccaactcattaatctctagatcttttttaa-----tctcttatagtttctctaggtcttcttcctctgcctctagtgatttga 6988016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 33755431 - 33755534
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||||||  |  ||| ||| ||||||||||||||||| || |||| || || ||||||||||||||  |||   ||||||||| ||||    
T  33755431 tccaactcattaatctctaagtttttcctaatagtttctcttatagtttttctaggt-tttcctctgcctctagtgatccgaccatcctccatctgatct 33755529  T
Q  111 actct 115  Q
    |||||    
T  33755530 actct 33755534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 41452829 - 41452877
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||||||||||||||| ||||||| |||||  ||||||||||    
T  41452829 tccaactcattaatctctagatctttcttaatagtttaacttatagttt 41452877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 48508428 - 48508274
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||||||  |||  ||||||||||||||||  | ||||||||| | | |||||  |||  |||||| ||||||||| ||||    
T  48508428 tccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctc-tacctcttttgacctgactctcctccatctgatct 48508330  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaag 167  Q
    ||||||||||| |||  |||  |||| | |||||| | ||||||||||||| |||||    
T  48508329 actcttcttacgacaacatctacggg-tcttctctctacatgcccaaaccatctaag 48508274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 220
Target Start/End: Original strand, 48734351 - 48734431
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaatg 220  Q
    |||||| | ||||||||||||||||||| |||  ||||||||||| ||||| |||| | ||| ||| ||| ||||||||||    
T  48734351 ttctctctacatgcccaaaccacctaagcctattttctaccatctgttctactatacgcgctaccccaacactctctaatg 48734431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 26388538 - 26388487
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    |||||||||| |||||||  |||  |||||||||||||||||||||||||||    
T  26388538 catgcccaaatcacctaaacctattttctaccatcttttctattataggtgc 26388487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 43308755 - 43308696
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtctt 70  Q
    ||||||| ||||||||||||||  ||||||| |||||||||| |||||| || |||||||    
T  43308755 tccaactgattaatctctagatttttcttaatagtttctcttgtagtttttctaggtctt 43308696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 55244471 - 55244381
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttat-agtttatccaggtcttccccctgcctctagtgatttgactcccctcc 101  Q
    ||||||||||||||||||||||  ||||||| | |||||||||  ||||| || |||||||||    |||||||||||||||||| ||||||    
T  55244471 tccaactcattaatctctagatttttcttaagaatttctcttaagagtttttctaggtcttccttg-gcctctagtgatttgactaccctcc 55244381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 255
Target Start/End: Original strand, 344936 - 345047
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaa--ctctctctaatg---tcatttctaattatatcgcgtct 243  Q
    |||| |||||| || |||| |||  ||||| ||||||||||| |||| ||||| ||| ||  ||||||||||||   |||||||||||  |||| |||||    
T  344936 catgaccaaactacttaagcctattttctaacatcttttctactataagtgctaccccaactctctctctaatgtcatcatttctaatcctatctcgtct 345035  T
Q  244 agtcttaccaca 255  Q
    ||||||||||||    
T  345036 agtcttaccaca 345047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 19162676 - 19162785
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||| ||| ||| ||| |||||||||||||| ||  | ||||||| || ||  ||||  |||  |||||| ||| ||||| ||||    
T  19162676 tccaactcattaatctctaaatctttcctaatagtttctcttatagatttcctaggtctt-cctctaactcttttgacctgactctccttcatctgatct 19162774  T
Q  111 actcttcttac 121  Q
    |||||||||||    
T  19162775 actcttcttac 19162785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 137
Target Start/End: Original strand, 23534659 - 23534784
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||||||  || ||| ||| ||||||| ||||| ||| |   |||||||| | | ||||||||||| | |||  | ||||||| ||||    
T  23534659 tccaactcattaatctctaagtctttcctaatagtttctgttataatttttttgggtcttcctc-tacctctagtgatctaactatcatccatctgatct 23534757  T
Q  111 actcttcttactacataatccgcgggt 137  Q
    ||||| |||||||||||| || |||||    
T  23534758 actctccttactacataacccacgggt 23534784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 31337749 - 31337803
Alignment:
Q  147 tgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||||| |||||||| |||| |||| ||| ||||||||||||| ||||||||||    
T  31337749 tgcatgctcaaaccacttaagcctagtttcaaccatcttttctactataggtgct 31337803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 33307305 - 33307259
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||||||||||||| |||||||  ||||| ||||||||||    
T  33307305 caactcattaatctctagatctttcttaatggtttcccttatagttt 33307259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 37228281 - 37228184
Alignment:
Q  5 tctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccat 103  Q
    ||||| |||||||| ||||| ||||  || ||||||| |||||| ||||| |||| |  ||||||| | | ||||||||||||||||||| ||||||||    
T  37228281 tctttatccaactcgttaatttctaagtctttcttaatagtttcccttatcgtttttataggtctttctc-tgcctctagtgatttgactaccctccat 37228184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 37351464 - 37351418
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattata 195  Q
    ||||||||||||||  |||||||| ||||||||||||||||| ||||    
T  37351464 catgcccaaaccactcaagtctagtttctaccatcttttctactata 37351418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 40743304 - 40743350
Alignment:
Q  79 ctctagtgatttgactcccctccatctaatctactcttcttactaca 125  Q
    ||||||||||||||||| | |||||||||| ||||||||||| ||||    
T  40743304 ctctagtgatttgactctcttccatctaatttactcttcttattaca 40743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 50249432 - 50249374
Alignment:
Q  158 accacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    ||||||||||||||| ||| ||||||||||||| |||| | ||| ||| ||||||||||    
T  50249432 accacctaagtctagtttccaccatcttttctactatacgcgctaccccaactctctct 50249374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Complemental strand, 38850186 - 38850125
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||| | ||||||||||||| |||||||||  |||||||| |||||||| |||| |||||    
T  38850186 ttctctctacatgcccaaaccatctaagtctattttctaccaacttttctactatatgtgct 38850125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 41842727 - 41842788
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||| | ||| ||||||||||||||| || | ||| ||||||||||||| ||||||||||    
T  41842727 ttctctctacatacccaaaccacctaagactggtttccaccatcttttctactataggtgct 41842788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 44395555 - 44395510
Alignment:
Q  75 ctgcctctagtgatttgactcccctccatctaatctactcttctta 120  Q
    |||||||||||||||||||| |||||||| | ||||||||| ||||    
T  44395555 ctgcctctagtgatttgactaccctccatttgatctactctcctta 44395510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 49042129 - 49042080
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttta 60  Q
    ||||||||||||| ||||| ||| ||| ||| ||||||||||||||||||    
T  49042129 tccaactcattaacctctaaatctttcctaatagtttctcttatagttta 49042080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 3987159 - 3987119
Alignment:
Q  72 cccctgcctctagtgatttgactcccctccatctaatctac 112  Q
    ||||| |||||||| || |||||||||||||||||||||||    
T  3987159 cccctacctctagtcatctgactcccctccatctaatctac 3987119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 36304159 - 36304123
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagttt 47  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  36304159 tccaactcattaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 45493781 - 45493837
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggt 67  Q
    |||| |||||||| |||| |||| ||||||| ||||||| |||||||||||| ||||    
T  45493781 tccagctcattaacctctggatctttcttaatagtttcttttatagtttatctaggt 45493837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 51447926 - 51448044
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccga-actctctctaa---tgtcatttctaattata 235  Q
    |||||| | ||||||||||| | ||||| |||  |||||||| |||||||| |||||||||| ||| |  ||||||||||   ||||||| |||||  ||    
T  51447926 ttctctctacatgcccaaactatctaagcctattttctaccaacttttctactataggtgctaccctactctctctctaatggtgtcattcctaatccta 51448025  T
Q  236 tcgcgtctagtcttaccac 254  Q
    ||  |||||||||||||||    
T  51448026 tcctgtctagtcttaccac 51448044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 44437800 - 44437994
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||||| || ||||| | ||||| ||||||||||| |||||||||||    
T  44437800 catgtttttctccaactcatttatctctagatccttcttaatagtttctcatatagtttttctaggtc-tacccctacctctagtgatctgactcccctc 44437898  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattatagg 197  Q
    ||||| |||||  || |||| |||| ||||| |  | | |||||| | |||||| |||||||||| |||||| ||||||||||||||||| ||||||    
T  44437899 catctcatctatactccttattacagaatccacaag-tcttctctctacatgccgaaaccacctatgtctagtttctaccatcttttctactatagg 44437994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 4 - 178
Target Start/End: Complemental strand, 42543435 - 42543263
Alignment:
Q  4 gtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccat 103  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| || ||||| | ||||| ||||||||||| ||||||||||||||    
T  42543435 gtctttctccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtc-tacccctacctctagtgatctgactcccctccat 42543337  T
Q  104 ctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttcta 178  Q
     | ||||||||| || |||||| ||||| | || | |||||| | |||||||||||||||||||| ||| |||||    
T  42543336 ttgatctactctcctaactacagaatccacagg-tcttctctgtacatgcccaaaccacctaagtttagtttcta 42543263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 43832291 - 43832089
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |  ||||||| || |||| |||| |||||||| | | |||||||| ||||    
T  43832291 tccaactcattaatctctagatccttcttaatagtttctcttatagtttgtttaggtctt-cctctgcgtctactgatttgattactctccatctgatct 43832193  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||| || |||||||||||| |  | |||||||| | |||||||||| |||||||| |||| ||| | ||| |||| || |||||||| | ||| ||||    
T  43832192 actctcctaactacataatccacatg-ttttctctgtacatgcccaaatcacctaagcctagtttcca-catattttttactataggtgataccccaact 43832095  T
Q  211 ctctct 216  Q
    ||||||    
T  43832094 ctctct 43832089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 42092710 - 42092463
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctcta--gtgatttgactcccctccatctaat 108  Q
    ||||||| ||||||||||| ||| || |||| |||||||| |||||||| || |||||| ||   || |||||  |||| |||||| |||||||||||||    
T  42092710 tccaactaattaatctctacatcttttttaatagtttctcctatagtttttctaggtctacc---tgtctctatagtgaattgactaccctccatctaat 42092614  T
Q  109 ctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaa 208  Q
    ||||||| ||||||||| ||||  |  |  || |||| | |||||||| | |||||||   ||| ||||||||||||||||| |||||| ||| ||| ||    
T  42092613 ctactctccttactacaaaatctacaagcctt-ctctctacatgcccagatcacctaatcttagtttctaccatcttttctagtataggcgctaccccaa 42092515  T
Q  209 ctctctctaa---tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    ||||||||||   ||||||||||||| ||||| ||||||||||||| |||||    
T  42092514 ctctctctaacattgtcatttctaatcatatcccgtctagtcttactacaca 42092463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 19235073 - 19235194
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||| ||||||||||||||||| |||| || ||||||||||||||||| || ||||||||| | |  ||||||||||||||||||||||||||| ||||    
T  19235073 tccaaatcattaatctctagatctttctcaatagtttctcttatagtttttctaggtcttcctc-tatctctagtgatttgactcccctccatctgatct 19235171  T
Q  111 actcttcttactacataatccgc 133  Q
    |||||  |||||||| |||||||    
T  19235172 actctctttactacagaatccgc 19235194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 26784431 - 26784548
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctac 112  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||| || |||||||  | |||||||||||||||||||| |||||||||| ||||||    
T  26784431 caactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtctt-tctctgcctctagtgatttgactaccctccatcttatctac 26784529  T
Q  113 tcttcttactacataatcc 131  Q
     || ||||||||| |||||    
T  26784530 cctccttactacaaaatcc 26784548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 257
Target Start/End: Original strand, 4598642 - 4598902
Alignment:
Q  2 atgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctcc 101  Q
    |||||||||||||||||||| ||||||||||||||| ||| || ||||| |||||||| || |||| || || || ||||||||||  ||||||||||||    
T  4598642 atgtctttctccaactcatttatctctagatccttcctaatagcttctcgtatagtttttctaggt-ttaccactacctctagtgacctgactcccctcc 4598740  T
Q  102 atctaatctactcttcttactacataatccgcgggt-ttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    || | ||||  | | ||||||||| ||| | |  || || | |||||  ||| |||||||||| |||||||| ||||||||||||| ||| |||||||||    
T  4598741 attttatctgttatacttactacaaaattcacaagtcttctttctat--atgtccaaaccaccaaagtctagtttctaccatctttactactataggtgc 4598838  T
Q  201 tccccgaa----ctctctctaat---gtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    | ||| ||    |||||||||||   |||||||  |||| |||| |||||||||||||||||||    
T  4598839 taccccaactctctctctctaatgtcgtcattttgaattctatcccgtctagtcttaccacaca 4598902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 38435145 - 38434898
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||| |||||||||||||||| ||||||| |||||||||| |||||| || ||||| | || |||||||||||||| |||||  ||||||| | ||||    
T  38435145 tccaacacattaatctctagatctttcttaatagtttctcttgtagtttttctaggtc-tacctctgcctctagtgatctgactatcctccatatgatct 38435047  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaacca-cctaagtctaggttctaccatcttttctattataggtgctccccgaa- 208  Q
    ||||| ||||||| |  |||  |  | | |||||| | ||||||||||||| || |||||||| ||| ||||||||||||| |||||||||| ||| ||     
T  38435046 actctccttactaaagcatctacaag-tcttctctttacatgcccaaaccacccaaagtctagtttccaccatcttttctactataggtgctaccccaat 38434948  T
Q  209 -ctctctctaa---tgtcatttctaattatatcgcgtctagtcttaccac 254  Q
     ||||||||||   |||||||||||||  | || |||||||| |||||||    
T  38434947 tctctctctaatgttgtcatttctaatcttctctcgtctagttttaccac 38434898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 5759074 - 5759187
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| |||||||||||||||||   ||||||||| ||||||| || |||| ||  |||| ||||||||||||||| |||||||    
T  5759074 catgtctttctccaactcattgatctctagatccttcttggtagtttctctaatagtttttctaggtatt-tccctacctctagtgatttgattcccctc 5759172  T
Q  101 catctaatctactct 115  Q
    ||||| |||||||||    
T  5759173 catctgatctactct 5759187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 257
Target Start/End: Original strand, 9556458 - 9556706
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||| ||||||| ||||||| ||||| ||||||||||| || ||||||| ||  ||||||||||  |||||||  ||||||||| || |    
T  9556458 tccaactcattaatcactagatctttcttaatagtttatcttatagtttttcaaggtctt-cctttgcctctagtagtttgactatcctccatctgatat 9556556  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaac- 209  Q
    ||| ||||||||||| ||||  |  | | |||||| | |||||| |||||||||||| |||  ||| ||||| ||||||| |||| ||| | ||| |||     
T  9556557 acttttcttactacagaatctacttg-tcttctctctacatgcctaaaccacctaagcctattttccaccat-ttttctactataagtgttaccccaact 9556654  T
Q  210 -tctctctaa---tgtcatttctaattatatcgcgtctagtcttaccacaca 257  Q
     |||||||||   ||||||||||||| ||||| |||||| ||||||||||||    
T  9556655 ttctctctaatgttgtcatttctaatcatatcccgtctaatcttaccacaca 9556706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 37470222 - 37470340
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||||||||||  || ||| ||||||||||||||||| | |||||||| || || || |||||||| ||||| || ||||||||||||    
T  37470222 tccaactcattaatctctagatctgtcctaatagtttctcttatagttttttcaggtctt-cctctaccactagtgatctgactaccttccatctaatct 37470320  T
Q  111 actcttcttactacataatc 130  Q
    ||||| |||| |||||||||    
T  37470321 actctccttaatacataatc 37470340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 37481706 - 37481909
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||| ||||||| ||  |||||| |  || |||| |||||| | |||||||||||||| ||||    
T  37481706 tccaactcatttatcgctagatctttcttaatagtttctctaatagtttttcttggtctt-catctacctccagtgatctaactcccctccatctgatct 37481804  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||| || |||||| ||| | |  | | |||||| | ||||| ||||||||||||| |||||||| |||||||||| || ||||||  || ||| ||||    
T  37481805 actctcctaactacaaaattcacaag-tcttctctctacatgctcaaaccacctaagcctaggttcaaccatcttttttactataggaactaccccaact 37481903  T
Q  211 ctctct 216  Q
    ||||||    
T  37481904 ctctct 37481909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 38860369 - 38860253
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctac 112  Q
    |||||||| |||||||||||| ||||||| ||||||||||||  ||| |||| ||||||  | |||||||||| |||||||| |||||||||| ||||||    
T  38860369 caactcatgaatctctagatctttcttaatagtttctcttatcatttttccaagtcttcgtc-tgcctctagtaatttgactaccctccatctcatctac 38860271  T
Q  113 tcttcttactacataatc 130  Q
    ||| ||| ||||||||||    
T  38860270 tctccttcctacataatc 38860253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 257
Target Start/End: Original strand, 23714358 - 23714596
Alignment:
Q  16 ctcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactct 115  Q
    |||||||||||||||||| ||  |||   ||||||||||||||| || | ||||||  | | | ||||||||||||||||||| |||| | |||||||||    
T  23714358 ctcattaatctctagatctttgataa---tttctcttatagtttttctaagtcttcatc-tacgtctagtgatttgactccccaccatttgatctactct 23714453  T
Q  116 tcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctc 215  Q
     ||||||||||||||| |  || || |||| | |||||| |||| || ||||||||| ||| ||||||||||||| |||| ||||| ||| |||||| ||    
T  23714454 ccttactacataatccacaagtctt-ctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgctaccc-aactctatc 23714551  T
Q  216 taatgtc---atttctaattatatcgcgtctagtcttaccacaca 257  Q
    |||||||   |||| ||||  |||   ||||||||||||||||||    
T  23714552 taatgtcgtcatttttaatcctattttgtctagtcttaccacaca 23714596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 257
Target Start/End: Original strand, 24102030 - 24102268
Alignment:
Q  16 ctcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactct 115  Q
    |||||||||||||||||| ||  |||   ||||||||||||||| || | ||||||  | | | ||||||||||||||||||| |||| | |||||||||    
T  24102030 ctcattaatctctagatctttgataa---tttctcttatagtttttctaagtcttcatc-tacgtctagtgatttgactccccaccatttgatctactct 24102125  T
Q  116 tcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctc 215  Q
     ||||||||||||||| |  || || |||| | |||||| |||| || ||||||||| ||| ||||||||||||| |||| ||||| ||| |||||| ||    
T  24102126 ccttactacataatccacaagtctt-ctctctacatgcctaaactacataagtctagtttccaccatcttttctactatatgtgctaccc-aactctatc 24102223  T
Q  216 taatgtc---atttctaattatatcgcgtctagtcttaccacaca 257  Q
    |||||||   |||| ||||  |||   ||||||||||||||||||    
T  24102224 taatgtcgtcatttttaatcctattttgtctagtcttaccacaca 24102268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 216
Target Start/End: Original strand, 43752036 - 43752239
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||| || | ||| ||| ||| ||||||||| ||||||| || ||||||| ||  |||||| |||||| ||| |  ||||||||| ||||    
T  43752036 tccaactcattaatttccaaatctttcctaatagtttctctgatagtttttctaggtctt-cctatgcctccagtgatctgagtatcctccatctgatct 43752134  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||| | ||||||||||||    || | |||||| | |||| ||||| |||||||| |||  |||||||| |||||||| |||||||||| ||| ||||    
T  43752135 actctccctactacataatctatagg-tcttctctctacatgtccaaatcacctaagcctattttctaccaccttttctactataggtgctaccccaact 43752233  T
Q  211 ctctct 216  Q
    ||||||    
T  43752234 ctctct 43752239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 18959104 - 18958903
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||| |  || ||| | | |||||||||| |||||| || ||||||| || ||||||||  |||| |||||  ||||||||| ||||    
T  18959104 tccaactcattaatctccaagtctttccttatagtttctcttgtagtttttctaggtctt-cctctgcctctgatgatctgactatcctccatctgatct 18959006  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgc----ccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccg 206  Q
    ||||| ||||||||| || | || || | |||||| |||||||    |||||||||||||| |||  ||| ||||||||||||| |||||||||| |||     
T  18959005 actctccttactacaaaagctgcagg-tcttctctctgcatgcccaaccaaaccacctaagcctattttccaccatcttttctactataggtgctacccc 18958907  T
Q  207 aact 210  Q
    ||||    
T  18958906 aact 18958903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 7431980 - 7432094
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc----ccctgcctctagtgatttgactcccctccatctaat 108  Q
    ||||||||||||||||||||||||||||| ||||||||  ||||||| || |||| ||||     ||||||||||||||| ||||| | |||||||||||    
T  7431980 caactcattaatctctagatccttcttaatagtttctccaatagtttttctaggttttcctcttgcctgcctctagtgatctgactactctccatctaat 7432079  T
Q  109 ctactcttcttacta 123  Q
     || ||| |||||||    
T  7432080 ttattctccttacta 7432094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 12026097 - 12026264
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctact 113  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||| || |||||||   || ||||| |||||| ||||| ||| |||||| |||||||    
T  12026097 aactcattaatctctagatctttcttaatagtttctcctatagtttctctaggtcttaatcc-gcctccagtgatgtgactacccaccatctgatctact 12026195  T
Q  114 cttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatc 183  Q
    || |||| |||| ||||  | || | |||||| | ||||  ||||||||||||| |||| ||| ||||||    
T  12026196 ctccttagtacaaaatctacagg-tcttctctctacatggtcaaaccacctaagcctagtttccaccatc 12026264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12489881 - 12489954
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcccc 74  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||||| |||||||| || |||||| ||||    
T  12489881 catgtctttctccaactcatttatctctagatccttcctaatagtttctcatatagtttttctaggtctacccc 12489954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 115
Target Start/End: Complemental strand, 33504405 - 33504313
Alignment:
Q  22 aatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactct 115  Q
    |||||||||||| ||||||| ||||||||||||||||| || |||| ||  | |||||||||||||| ||||| |||||||||| |||||||||    
T  33504405 aatctctagatctttcttaatagtttctcttatagtttttctaggt-ttttctctgcctctagtgatctgactaccctccatctgatctactct 33504313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 254
Target Start/End: Complemental strand, 12734814 - 12734648
Alignment:
Q  90 tgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttct 189  Q
    |||||| ||||||| | ||||||||||||||| ||   |||  ||||| || |||| | |||| |||||||| ||||| |||  ||||||||  ||||||    
T  12734814 tgactctcctccatttgatctactcttcttaccacggcatctacgggtctt-ctctttacatgtccaaaccatctaagcctattttctaccaatttttct 12734716  T
Q  190 attataggtgctccccgaactctctctaa---tgtcatttctaattatatcgcgtctagtcttaccac 254  Q
    | |||||||||| |||  |||||||||||   |||||||||||||  |||| ||||||||||||||||    
T  12734715 actataggtgctacccccactctctctaatggtgtcatttctaatcctatcccgtctagtcttaccac 12734648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 18188846 - 18188732
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattatat 236  Q
    |||||| | ||||||||||||||||||||| || ||| |||||||||||||  | ||||||| ||| ||||||||| ||   |||||||||| || ||||    
T  18188846 ttctctttacatgcccaaaccacctaagtcgagcttccaccatcttttctagaagaggtgctaccccaactctctccaatgttgtcatttctgatcatat 18188747  T
Q  237 cgcgtctagtcttac 251  Q
    | ||||||| |||||    
T  18188746 cccgtctagccttac 18188732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 28960294 - 28960342
Alignment:
Q  5 tctttctccaactcattaatctctagatccttcttaaaagtttctctta 53  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  28960294 tctttctccaactcatttatctctagatccttcttaacagtttctctta 28960342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 29548733 - 29548827
Alignment:
Q  18 cattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctact 113  Q
    |||||||||||| ||| ||||||| | ||||||||||||||| | |||||||| || |||| ||| ||||||||||| |||||||| | |||||||    
T  29548733 cattaatctctaaatctttcttaataatttctcttatagttttttcaggtctt-cctctgcttctcgtgatttgactaccctccatttgatctact 29548827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 199
Target Start/End: Original strand, 24583798 - 24583907
Alignment:
Q  89 ttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    ||||||| ||||||| | ||||||||||||||| |||  |||  ||||| || |||| | ||||||||||||| ||||| |||  |||||||| ||||||    
T  24583798 ttgactctcctccatttgatctactcttcttacgacagcatctacgggtctt-ctctctacatgcccaaaccatctaagcctattttctaccaacttttc 24583896  T
Q  189 tattataggtg 199  Q
    |||||||||||    
T  24583897 tattataggtg 24583907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 33287611 - 33287553
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||| || |||||||||    
T  33287611 aactcattaatttctagatctttcttaatagtttctcttatagtttttctaggtcttcc 33287553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 36870040 - 36869935
Alignment:
Q  22 aatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttac 121  Q
    |||||||| ||||||||||  ||||||||||||||||| || || |||| ||  |||||||||||| ||| ||  |||||||||||| |||||| |||||    
T  36870040 aatctctaaatccttcttattagtttctcttatagtttttctagctctt-cctatgcctctagtgaattgtctatcctccatctaatttactctccttac 36869942  T
Q  122 tacataa 128  Q
    | |||||    
T  36869941 tgcataa 36869935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 1626386 - 1626342
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagt 57  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||    
T  1626386 caactcattaatctctagatctttcttaatagtttctcttatagt 1626342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 211
Target Start/End: Complemental strand, 12141737 - 12141539
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||| |||||||||||||  || ||| ||| |||||||| ||||| || || ||||||||| | | ||||| || ||||||||  |||| |||| ||||    
T  12141737 tccaagtcattaatctctaagtctttcctaatagtttctcctatagcttttctaggtcttcctc-tacctcttgtaatttgactatcctcaatctgatct 12141639  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||| ||||||| | ||||  | ||| || || | | | ||||||||||||||||| ||   ||| ||||||||||||| |||||||||| ||| ||||    
T  12141638 actctccttactagagaatctacaggtctt-ctttctacgtgcccaaaccacctaagcctcttttccaccatcttttctactataggtgctaccccaact 12141540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 18188945 - 18188863
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgact 94  Q
    |||| |||||||||||||||||| |||| || ||||||||||||| ||| || | ||| ||||  |||||||||||||||||||    
T  18188945 tccagctcattaatctctagatctttctgaatagtttctcttataatttttctaagtc-tccctttgcctctagtgatttgact 18188863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 12882267 - 12882317
Alignment:
Q  151 tgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||||||||||||||| |||  ||||||||||||||||| ||||||||||    
T  12882267 tgcccaaaccacctaagcctattttctaccatcttttctagtataggtgct 12882317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 19855655 - 19855594
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    |||| |||||||| |||| |||| ||||||| ||||||| |||||||||||| |||||||||    
T  19855655 tccagctcattaacctctggatctttcttaatagtttcttttatagtttatctaggtcttcc 19855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 23915782 - 23915831
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttta 60  Q
    |||| |||||||||||||||||  ||||||| ||||||||||||||||||    
T  23915782 tccacctcattaatctctagatttttcttaatagtttctcttatagttta 23915831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 26670961 - 26670900
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||||||||| ||| ||||||| ||||||| ||||||||| |  |||||||||    
T  26670961 tccaactcattaatctctaaatctttcttaatagtttcttttatagtttttgtaggtcttcc 26670900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 11006905 - 11006853
Alignment:
Q  6 ctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtt 58  Q
    |||| |||||| ||||||||||||| || ||||||| ||||||||||||||||    
T  11006905 ctttatccaacccattaatctctaggtctttcttaatagtttctcttatagtt 11006853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 12470976 - 12471012
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttc 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  12470976 catgtctttctccaactcatttatctctagatccttc 12471012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 41763258 - 41763376
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct-ccccgaactctctctaa---tgtcatttctaattata 235  Q
    |||||| |||||| |||||||||||||| |||  |||||||| |||||||| |||||||| | ||||   ||||||||||   ||||||| |||||  ||    
T  41763258 ttctctctgcatgtccaaaccacctaagcctattttctaccaacttttctactataggtgttaccccactctctctctaatggtgtcattcctaatccta 41763357  T
Q  236 tcgcgtctagtcttaccac 254  Q
    ||  |||||||||||||||    
T  41763358 tcttgtctagtcttaccac 41763376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 216
Target Start/End: Complemental strand, 8180896 - 8180770
Alignment:
Q  89 ttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    ||||||| ||||||| | ||||||||||||||| ||   |||| | ||| || |||| | ||||||||||||| |||||  ||  |||||||| ||||||    
T  8180896 ttgactctcctccatttgatctactcttcttaccacggcatccacaggtctt-ctctctacatgcccaaaccatctaagcttattttctaccaacttttc 8180798  T
Q  189 tattataggtgctccccgaactctctct 216  Q
    || |||||||||| |||  |||||||||    
T  8180797 tactataggtgctacccccactctctct 8180770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 19024371 - 19024328
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttat 54  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||    
T  19024371 tccaactcattaatctttagatctttcttaatagtttctcttat 19024328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 123
Target Start/End: Complemental strand, 43260529 - 43260486
Alignment:
Q  80 tctagtgatttgactcccctccatctaatctactcttcttacta 123  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||    
T  43260529 tctagtgatttgactaccctccatctgatctactctccttacta 43260486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 13240961 - 13241011
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttcta 190  Q
    |||||| | ||||||||||||||||||| |||| ||| |||||||||||||    
T  13240961 ttctctctacatgcccaaaccacctaagcctagtttccaccatcttttcta 13241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 26850365 - 26850311
Alignment:
Q  75 ctgcctctagtgatttgactcccctccatctaatctactcttcttactacataat 129  Q
    |||||| |||||||||||||  ||||||||| ||||| ||| |||||||||||||    
T  26850365 ctgcctttagtgatttgactatcctccatctgatctagtctccttactacataat 26850311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 254
Target Start/End: Original strand, 41197444 - 41197563
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactc--tctctaa---tgtcatttctaattat 234  Q
    |||||| | |||| |||||||| ||||| |||  |||||||| ||||||||||||||||||| |||  ||||  |||||||   ||||||| |||||  |    
T  41197444 ttctctctacatgtccaaaccatctaagcctattttctaccaacttttctattataggtgctaccctcactctatctctaatggtgtcattcctaatcct 41197543  T
Q  235 atcgcgtctagtcttaccac 254  Q
    |||  |||||||||||||||    
T  41197544 atcatgtctagtcttaccac 41197563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 8197630 - 8197671
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctctt 52  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  8197630 tccaactcattaatctttagatctttcttaatagtttctctt 8197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 8202390 - 8202431
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctctt 52  Q
    |||||||||||||||| |||||| ||||||| ||||||||||    
T  8202390 tccaactcattaatctttagatctttcttaatagtttctctt 8202431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 41022486 - 41022523
Alignment:
Q  15 actcattaatctctagatccttcttaaaagtttctctt 52  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  41022486 actcattaatctctagatcattcttaacagtttctctt 41022523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 43238309 - 43238370
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| ||||||||||    
T  43238309 ttctctttacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgct 43238370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 45640615 - 45640656
Alignment:
Q  12 ccaactcattaatctctagatccttcttaaaagtttctctta 53  Q
    |||||| ||||||||||||||| ||||||| |||||||||||    
T  45640615 ccaacttattaatctctagatctttcttaatagtttctctta 45640656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 2610654 - 2610578
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||| | |||||||||| |||  |||||||||    
T  2610654 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttccactataggtgctacccccactctctct 2610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 38452901 - 38452977
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| ||||| |||| |||  |||||||||    
T  38452901 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactatagatgctacccccactctctct 38452977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 42149749 - 42149793
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttata 55  Q
    |||| |||| ||||||||||||| ||||||| |||||||||||||    
T  42149749 tccagctcaataatctctagatctttcttaatagtttctcttata 42149793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 50771635 - 50771764
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||| || ||||||| ||||| |||||||| ||||||||||||||    
T  50771635 catgtctttctccaacttattaatctctaggtccttcttaatagtttcgcttatagtttttctaggtctt-cccctacctctagtcatttgactcccctc 50771733  T
Q  101 catctaatctactcttcttactacataatcc 131  Q
    ||||| ||||||||| ||||||||| |||||    
T  50771734 catctgatctactctccttactacaaaatcc 50771764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 43898435 - 43898303
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttctt---aaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactccc 97  Q
    ||||| |||||||||||||||||||||||||||||||||   || ||||||||||||||||| |||||||||| ||| | ||| | ||||||||||||||    
T  43898435 catgtttttctccaactcattaatctctagatccttcttctaaatagtttctcttatagtttttccaggtctttccc-tacctttggtgatttgactccc 43898337  T
Q  98 ctccatctaatctactcttcttactacataatcc 131  Q
    |||||||| ||||||||| |||||||||||||||    
T  43898336 ctccatctgatctactctccttactacataatcc 43898303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 7 - 253
Target Start/End: Complemental strand, 10272455 - 10272211
Alignment:
Q  7 tttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatcta 106  Q
    ||||||| ||| |||||| |||||||||||||||| |||||||||||||  || || ||||||| ||||| |||||||||||||||||||| |||||||     
T  10272455 tttctcctacttattaatttctagatccttcttaatagtttctcttataagttttctaggtctt-cccctacctctagtgatttgactcccatccatctg 10272357  T
Q  107 atctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccg 206  Q
    |||| |||| ||| ||||  ||||| | || | |||||| | |||||| ||||||| | ||||||| ||||||||||||||||| || ||||||  |||     
T  10272356 atctcctctccttcctac-gaatccacagg-tcttctctctacatgccaaaaccactttagtctagtttctaccatcttttctactacaggtgcaaccca 10272259  T
Q  207 aactctct-ctaatgtcatttctaattatatcgcgtctagtcttacca 253  Q
    || |||||  |  |||||| ||||||| |||| |||||||||||||||    
T  10272258 aaatctctaatgttgtcatctctaattctatcccgtctagtcttacca 10272211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 28528558 - 28528429
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |  ||||||| ||||| | ||||| |||||||||||||||    
T  28528558 catgtctttctccaactcattaatctctagatccttcttaatagtttctgttatagtttttttaggtctt-cccctacttctagggatttgactcccctc 28528460  T
Q  101 catctaatctactcttcttactacataatcc 131  Q
    ||| | ||||||| | ||||||||| |||||    
T  28528459 catttgatctactgtccttactacagaatcc 28528429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 27637710 - 27637910
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| ||| ||||||||||||| | ||||||||| | ||||| |  ||||||| ||||| |||||||||||||| |||| |||    
T  27637710 catgtctttctccaactcattgatcactagatccttcttgatagtttctctaaaagtttttttaggtctt-cccctacctctagtgatttgcctccactc 27637808  T
Q  101 catcta--atctactcttcttactacataatccgcgggt-ttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattatagg 197  Q
    ||| ||  ||||||||| |||||||||  |||| |  || |||||||||  |||||||||| ||||||||||||| ||||| ||||||||||  ||||||    
T  27637809 catatatgatctactctccttactacaacatccacatgtcttttctcta--catgcccaaaacacctaagtctagtttctatcatcttttctgctatagg 27637906  T
Q  198 tgct 201  Q
    ||||    
T  27637907 tgct 27637910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 40419842 - 40419578
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||||  ||||| || || | ||| | ||||| |||||||| || | |||||||||    
T  40419842 catgtctttctccaactcatttatctctagatccttcataatagtttcttgtatagattttctatgtc-tacccctacctctagttatctaactcccctc 40419744  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    ||||| | ||||||| ||| ||||||||||| |  | | |||||| | |||||||||||||| ||||||||| | ||||||||| ||||| |||| || |    
T  40419743 catctgaactactctccttgctacataatccacatg-tcttctctctacatgcccaaaccacttaagtctagttactaccatctattctactataagttc 40419645  T
Q  201 tccccgaa--ctctctctaa---tgtcatttctaattatatcgcgtctagtcttaccacacactcaa 262  Q
    | ||| ||  ||||||||||   |||||||||||||| |||| | |||||| |||||| ||| ||||    
T  40419644 taccccaactctctctctaatgttgtcatttctaattctatctcatctagttttaccatacattcaa 40419578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 37263532 - 37263325
Alignment:
Q  2 atgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctcc 101  Q
    |||| ||||||||||||||| ||||||||||| ||||| | |||||| || ||||| | || ||||||||||| | |||||||||||||||| |||||||    
T  37263532 atgtgtttctccaactcattgatctctagatc-ttcttgatagtttcactaatagtatttctaggtcttcccc-tacctctagtgatttgacacccctcc 37263435  T
Q  102 atctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    |||| || |||||| |||||  ||  |||| |  | |||||||| | ||||||||||||||  |||||||| |||||| |||||||||| ||||||||||    
T  37263434 atctgatttactctccttaccgcaacatccacaag-ttttctctctacatgcccaaaccactgaagtctagtttctactatcttttctactataggtgct 37263336  T
Q  202 ccccgaactct 212  Q
     ||| ||||||    
T  37263335 accccaactct 37263325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 43423912 - 43423709
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||| ||||||||||||| |||||||  || |||||| || ||| || ||||||||| | | ||||||||||||||||| |  |||||||| |||    
T  43423912 tccaactcactaatctctagatctttcttaatggtctctcttgtaatttttctaggtcttcctc-tacctctagtgatttgactactatccatctagtct 43423814  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||| ||||||||||||||  |  | | |||||| | |||| |||||||||||||| |||| ||| ||||||||||||| |||||||| | ||| ||||    
T  43423813 actctacttactacataatctacaag-tcttctctctacatggccaaaccacctaagcctagtttccaccatcttttctactataggtgttaccccaact 43423715  T
Q  211 ctctct 216  Q
    ||||||    
T  43423714 ctctct 43423709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 26016640 - 26016381
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||| |||||| |||||||| ||||||||||| ||| ||| ||||||||||||||||| || |||||| | |  | ||||||||||| ||||||||||     
T  26016640 catgtttttctctaactcatttatctctagatcattcctaatagtttctcttatagtttttctaggtctactct-tacctctagtgatctgactcccctt 26016542  T
Q  101 catctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgc 200  Q
    ||||| ||||| ||| ||| ||||| ||| |   || | |||| | | ||| |||||||||||||| ||||| ||||||||||||||||  ||||||||     
T  26016541 catctgatctaatctccttgctacagaatgcatagg-tcttctttctacatacccaaaccacctaaatctagtttctaccatcttttctcatataggtgt 26016443  T
Q  201 tccccgaa--ctctctctaatg---tcatttctaattatatcgcgtctagtcttaccacaca 257  Q
    | ||| ||  ||||||||||||   | |||| ||||||||||  ||||||||||||||||||    
T  26016442 taccccaactctctctctaatgccattatttataattatatcctgtctagtcttaccacaca 26016381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 201
Target Start/End: Complemental strand, 38869075 - 38868887
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||| |||||||| ||||||| ||||||| | ||||||||||||||| || ||||||||  | |||||||| |||||||||| |||||||||||||||    
T  38869075 tccaacccattaatcgctagatctttcttaataatttctcttatagtttttctaggtcttcttc-tgcctctaatgatttgactaccctccatctaatct 38868977  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    ||||| ||  ||| | ||||  |  | | |||||| | ||||||||||||||||||| | || ||| |||||||||||||| |||||||||    
T  38868976 actctcctcgctagagaatctactag-tgttctctctacatgcccaaaccacctaagccgagtttccaccatcttttctatgataggtgct 38868887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 216
Target Start/End: Original strand, 3818947 - 3819148
Alignment:
Q  13 caactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctac 112  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||| || ||||||| || ||  |||||||| ||||| | |||||||||| ||||||    
T  3818947 caactcattaatctctaaatctttcttaatagtttctcttatagtttttcaaggtctt-cctctttctctagtggtttgattaccctccatctgatctac 3819045  T
Q  113 tcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactct 212  Q
    |||  |||||| | ||||| |  | | |||| | | |||||||||||||| ||||||||| | | |||||||||||||  ||||||||| ||  ||||||    
T  3819046 tctctttactagagaatccacaag-tcttctttctacatgcccaaaccacttaagtctagttaccaccatcttttctaccataggtgctacctcaactct 3819144  T
Q  213 ctct 216  Q
    ||||    
T  3819145 ctct 3819148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 40416564 - 40416361
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||| |||||| ||||||| ||||| ||||||||||| || ||||||||  | || || | ||||| |||||  ||| ||||| ||||    
T  40416564 tccaactcattaatctatagatctttcttaatagtttgtcttatagtttttctaggtcttcttc-tgtctttggtgatctgactatcctgcatctgatct 40416466  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||| ||||||||| ||||  | | || |||||| | |||||| |||||||||||| || | ||| ||||||||||||| |||||||||| | | ||||    
T  40416465 actctccttactacaaaatctacag-ttcttctctctacatgcctaaaccacctaagcctcgtttccaccatcttttctactataggtgctactccaact 40416367  T
Q  211 ctctct 216  Q
    ||||||    
T  40416366 ctctct 40416361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 6025798 - 6025690
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||||| || |||  ||| ||||||||||||| || ||||||| || |||||||||||||||||||| |||| ||||| ||||    
T  6025798 tccaactcattaatctctagatcttttttactagtatctcttatagtttttctaggtctt-cctctgcctctagtgatttgactaccctacatctgatct 6025700  T
Q  111 actcttctta 120  Q
    ||||| ||||    
T  6025699 actctcctta 6025690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 51584946 - 51584855
Alignment:
Q  2 atgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgact 94  Q
    ||||||||||||| ||||||||| || |||||| |||||| ||||||||||||||||| || ||||||| ||||| |||||||||||||||||    
T  51584946 atgtctttctccagctcattaatgtccagatccctcttaatagtttctcttatagtttttctaggtctt-cccctacctctagtgatttgact 51584855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 42501301 - 42501142
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||||||||||||| |||||| ||||||| | ||||||||||||||| || |||| || || || |||||| |||||||||| |||||||||| | ||    
T  42501301 tccaactcattaatctatagatctttcttaataatttctcttatagtttttctaggt-tttcctctacctctaatgatttgactaccctccatctgaact 42501203  T
Q  111 actcttcttactacataatccgcgggt-ttttctctatgcatgcccaaaccacctaagtctag 172  Q
    ||||| ||| ||||| ||||| ||||| | |||||||  |||| |||||||||| ||| ||||    
T  42501202 actctcctttctacagaatccacgggtctcttctcta--catgtccaaaccacccaagcctag 42501142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 12261792 - 12261921
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    ||||||||||||||||| ||||||| |||  | |||||||  ||||||||||||||||| || ||||||| ||||  |||||||||||||||||| ||||    
T  12261792 catgtctttctccaactaattaatccctaatttcttcttactagtttctcttatagtttttctaggtcttacccc-acctctagtgatttgactctcctc 12261890  T
Q  101 catctaatctactcttcttactacataatcc 131  Q
    ||||  |||||| ||  |||||||| |||||    
T  12261891 catcagatctaccctcattactacaaaatcc 12261921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 195
Target Start/End: Complemental strand, 15577611 - 15577432
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||  ||| |  || |||| || || ||||||||||| |||||    ||||||| ||||    
T  15577611 tccaactcattaatctctatatccttcttaatagtttctcttattatttttttagatctt-cctctacctctagtgatgtgact---atccatctgatct 15577516  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattata 195  Q
    ||||| ||||||||| |||||||  | | |||||||| ||||| ||||||||||||  | || ||| ||||||||||||| ||||    
T  15577515 actctccttactacagaatccgcatg-tcttctctatacatgctcaaaccacctaatcccagcttccaccatcttttctactata 15577432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 52442608 - 52442720
Alignment:
Q  2 atgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctcc 101  Q
    |||||||| |||||||||||||  |||||||||||||| | ||||||||||||| ||  || ||||||| || || ||||||| |||||||||||| |||    
T  52442608 atgtctttatccaactcattaacatctagatccttcttgatagtttctcttatatttgttctaggtctt-cctctacctctagagatttgactcccttcc 52442706  T
Q  102 atctaatctactct 115  Q
    |||| |||||||||    
T  52442707 atctgatctactct 52442720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 7083092 - 7083020
Alignment:
Q  2 atgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcccc 74  Q
    ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| || || |||||||||||    
T  7083092 atgtctttctccaactcattaatctctagttccatcttaatagtttctcttatagcttttctaggtcttcccc 7083020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 257
Target Start/End: Original strand, 14225981 - 14226165
Alignment:
Q  75 ctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggt 174  Q
    |||||||||||||||||||| | |||||| | ||||||||| ||||||||| ||||  | ||  |  |||| | ||||||||||||||||||| |||  |    
T  14225981 ctgcctctagtgatttgactacgctccatgtgatctactctccttactacaaaatctacaggaatc-ctctctacatgcccaaaccacctaagcctattt 14226079  T
Q  175 tctaccatcttttctattataggtgctccccgaactctctctaatgt---catttctaattatatcgcgtctagtcttaccacaca 257  Q
    || |||||||||||||| ||||||||| |   ||||||||| |||||   ||||||||||  ||||  |||||| |||||||||||    
T  14226080 tccaccatcttttctatgataggtgctactgcaactctctccaatgttgccatttctaatcctatcatgtctagccttaccacaca 14226165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 33560947 - 33561065
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||  ||||||||||||| | ||||| |||||| |||| ||||| || ||| ||||| | ||||||||||||||||||| |||||||||  ||||    
T  33560947 tccaactcgctaatctctagatcttacttaatagtttcccttacagtttttctaggacttcctc-tgcctctagtgatttgactaccctccatcatatct 33561045  T
Q  111 actcttcttactacataatc 130  Q
    ||||| ||||||||| ||||    
T  33561046 actctccttactacagaatc 33561065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 44008772 - 44008659
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| ||||||||||| ||||  | ||||||||||| | ||| || ||||||||| | ||||||||||||||||||| ||| | || ||||||    
T  44008772 tccaactcattgatctctagatctttctcgatagtttctcttagattttttctaggtcttcctc-tgcctctagtgatttgactacccgctatttaatct 44008674  T
Q  111 actcttcttactaca 125  Q
    ||||||| |||||||    
T  44008673 actcttcatactaca 44008659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 89 - 254
Target Start/End: Complemental strand, 51602172 - 51602005
Alignment:
Q  89 ttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    ||||||| ||||||| | ||||||||||||||| ||   |||  ||||| || |||| | ||||||||||||| ||||| |||  |||||||| ||||||    
T  51602172 ttgactctcctccatttgatctactcttcttaccacgacatctacgggtctt-ctctctacatgcccaaaccatctaagcctattttctaccaacttttc 51602074  T
Q  189 tattataggtgctccccgaactctctctaa---tgtcatttctaattatatcgcgtctagtcttaccac 254  Q
    || |||||||||| |||  |||||||||||   ||||||| ||||| |||||  |||||||||||||||    
T  51602073 tactataggtgctaccctcactctctctaatggtgtcattcctaatcatatcatgtctagtcttaccac 51602005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 216
Target Start/End: Complemental strand, 2544759 - 2544589
Alignment:
Q  43 agtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttc 142  Q
    ||||||||| ||||||| || ||||||||| | | ||||||||| |||||||  ||||||||| ||||||||| ||||||| | ||||    ||| || |    
T  2544759 agtttctctgatagtttttctaggtcttcctc-tacctctagtg-tttgactatcctccatctgatctactctccttactatagaatctataggtctt-c 2544663  T
Q  143 tctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    ||| | |||| |||||||||||||||||   ||| ||||||||||||| |||||||||| ||| ||||||||||    
T  2544662 tctctacatgtccaaaccacctaagtctgttttccaccatcttttctactataggtgctaccccaactctctct 2544589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 30834066 - 30834174
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||| || || ||||||| || || ||||||  ||||||||| || ||||||| ||||    
T  30834066 tccaactcattaatctctagatctttcgtaatagtttctcttatagcttttctaggtctt-cctctccctctatcgatttgactaccttccatctgatct 30834164  T
Q  111 actcttctta 120  Q
    ||||| ||||    
T  30834165 actctcctta 30834174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 19969297 - 19969361
Alignment:
Q  7 tttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttc 71  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||| || ||||||||    
T  19969297 tttctccaactcattaatctctagatctttgttaatagtttctcttatagtttttctaggtcttc 19969361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 853874 - 853956
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgact 94  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||| || |  ||||||| || ||||||||||||||||||||    
T  853874 tccaactcactaatctctagatccttcttaatagtttctcgtatagattttttaggtctt-cctctgcctctagtgatttgact 853956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 9599486 - 9599729
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctact 113  Q
    |||||||||| ||||| ||  ||| ||| |||||||||| |||||| || ||||||||| | | |||||  |||| |||||| ||||||||| |||||||    
T  9599486 aactcattaaactctaaatatttcctaatagtttctcttgtagtttttctaggtcttcctc-tacctcttatgatctgactctcctccatctgatctact 9599584  T
Q  114 cttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctc 213  Q
    |||  ||||| |  ||| || |||  | || | |  |||||| ||||||||||| |||  ||||||||||||||||| |||||||| | | | |||||||    
T  9599585 ctttgtactataacatctgcaggtcat-ctatttatatgcccgaaccacctaagcctattttctaccatcttttctactataggtgttactccaactctc 9599683  T
Q  214 tc-----taatgtcatttctaattatatcgcgtctagtcttaccac 254  Q
    ||     | |||||||| ||||| ||||| ||||||||||||||||    
T  9599684 tctctaatgatgtcattcctaatcatatcccgtctagtcttaccac 9599729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 32404618 - 32404801
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctact 113  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||||| |  ||||||| || || ||||| ||||| |||||  |||||||||  ||||||    
T  32404618 aactcattaatctctaaatctttcctaatagtttctcttatagtttttgtaggtctt-cctctacctcttgtgatatgactatcctccatcttctctact 32404716  T
Q  114 cttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    || ||||||| | ||||  | || | |||||| | |||  |||||||||||||| |||  ||| |||||||||| || ||||||||    
T  32404717 ctccttactatagaatctacagg-tcttctctctacatatccaaaccacctaagcctattttccaccatcttttttactataggtg 32404801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 201
Target Start/End: Complemental strand, 5338883 - 5338729
Alignment:
Q  45 tttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctc 144  Q
    ||||||||||||||| || |||||| |  | ||||||||||||| ||| |  ||||||||| ||||||||| ||||||| |  |||  | ||| || |||    
T  5338883 tttctcttatagtttttctaggtctacttc-tgcctctagtgatctgaatatcctccatctgatctactctccttactaaagcatctacaggtctt-ctc 5338786  T
Q  145 tatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    | |||||||||||||||||||||   || ||| ||||||||||||| ||||||||||    
T  5338785 tctgcatgcccaaaccacctaagctcagtttccaccatcttttctactataggtgct 5338729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 8203223 - 8203283
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttc 71  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||| || ||||||||    
T  8203223 tccaactcattaatctctagatcttttttaatagtttctcttatagtttttctaggtcttc 8203283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 8672111 - 8671867
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||||||  |||  |||||||| |||||||  | ||||||||| | | |||||  | | ||||||| ||||||| | ||||    
T  8672111 tccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctc-tacctcttttaacttgactctcctccatttgatct 8672013  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||||||||| ||   |||  ||| | || |||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||    
T  8672012 actcttcttaccacggcatctacggatctt-ctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccact 8671914  T
Q  211 ctctctaa---tgtcatttctaattatatcgcgtctagtcttaccac 254  Q
    ||||||||   ||||||| |||||  ||||  |||||||||||||||    
T  8671913 ctctctaatggtgtcattcctaatcctatcatgtctagtcttaccac 8671867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 46388569 - 46388521
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||    
T  46388569 tccaactcatcaatctctagatcattcttaaaagtttctcttatagttt 46388521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 46395013 - 46394965
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||    
T  46395013 tccaactcatcaatctctagatcattcttaaaagtttctcttatagttt 46394965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 17640208 - 17640267
Alignment:
Q  78 cctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggt 137  Q
    |||||||||| ||||||||||||||||| ||||||||| ||||||||| ||||| |||||    
T  17640208 cctctagtgaattgactcccctccatctgatctactctccttactacaaaatccacgggt 17640267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 30396818 - 30396900
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgact 94  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||  |||  ||||| ||||| |||||||| ||||||||    
T  30396818 tccaactcattaatctctggatccttcttaacagtttctcttatggttgttccgtgtctt-cccctacctctagttatttgact 30396900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 250
Target Start/End: Complemental strand, 9509384 - 9509269
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct--aatg---tcatttctaattat 234  Q
    |||||| | ||||||||||| ||||||| |||  || |||||||||||||| |||||||||| ||| ||||||||||  ||||   ||||||||||| ||    
T  9509384 ttctctctacatgcccaaactacctaagcctattttttaccatcttttctactataggtgctaccccaactctctctctaatggtgtcatttctaatcat 9509285  T
Q  235 atcgcgtctagtctta 250  Q
    |||  |||||||||||    
T  9509284 atcctgtctagtctta 9509269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 120
Target Start/End: Complemental strand, 17815669 - 17815564
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctact 113  Q
    ||||||| |||| ||||||| |||| || ||||||||||||| ||| || ||||||| ||| |||||| | |||||||||| | |||||||| || ||||    
T  17815669 aactcatcaatcactagatctttctaaatagtttctcttataatttttctaggtctt-cccttgcctccaatgatttgactactctccatctgatttact 17815571  T
Q  114 cttctta 120  Q
    |||||||    
T  17815570 cttctta 17815564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 29807984 - 29807891
Alignment:
Q  87 atttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctacca 181  Q
    ||||||||||||||||| |||||||||||  |||||||||||||| |  | | |||||| | |||||||||| ||| ||||||||| ||||||||    
T  29807984 atttgactcccctccatttaatctactctctttactacataatccacatg-tcttctctctacatgcccaaatcacgtaagtctagtttctacca 29807891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 50806860 - 50806750
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    |||||| ||||||||||||  |||||||| | |||||||||||| |||| || ||||||||  | | | |||||||||||||||||||||||| | ||||    
T  50806860 tccaacgcattaatctcta--tccttcttgatagtttctcttattgtttttctaggtcttcatc-tacttctagtgatttgactcccctccatttgatct 50806764  T
Q  111 actcttcttactac 124  Q
    || || ||||||||    
T  50806763 accctccttactac 50806750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 1210938 - 1210735
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||||||  |||  |||||||| |||||||  | ||||||||| | | |||||  | | ||||||| ||||||| | ||||    
T  1210938 tccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctc-tacctcttttaacttgactctcctccatttgatct 1210840  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||||||||| ||   |||  ||||| || |||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||    
T  1210839 actcttcttaccacggcatctacgggtctt-ctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccact 1210741  T
Q  211 ctctct 216  Q
    ||||||    
T  1210740 ctctct 1210735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 8342970 - 8343031
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    ||||||||||||||||||||||| || ||||  |||||||||||||||| || |||||||||    
T  8342970 tccaactcattaatctctagatctttattaattgtttctcttatagtttttctaggtcttcc 8343031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 8796402 - 8796290
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||| |||||||| |||||||| ||||||| ||||||||||| ||||| |   |||||| || |||||||||||||| |||||  ||||||||  || |    
T  8796402 tccaagtcattaatatctagatctttcttaatagtttctcttaaagtttttattggtctt-cctctgcctctagtgatctgactatcctccatccgattt 8796304  T
Q  111 actcttcttactac 124  Q
    ||||| ||||||||    
T  8796303 actctccttactac 8796290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 52160389 - 52160438
Alignment:
Q  76 tgcctctagtgatttgactcccctccatctaatctactcttcttactaca 125  Q
    ||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  52160389 tgcctctagtgatttgactaccctccatctagtctactcttgttactaca 52160438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 10569219 - 10569310
Alignment:
Q  75 ctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaag 167  Q
    |||||||||||||||||| | ||||||||||||||||| || | ||||||| ||||  | || | |||||| | |||||||||||||||||||    
T  10569219 ctgcctctagtgatttgattaccctccatctaatctaccctccgtactacagaatctacagg-tcttctctctacatgcccaaaccacctaag 10569310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 252
Target Start/End: Complemental strand, 12231558 - 12231315
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||| ||||| ||||||| ||| ||||||||||||| || | || |||| ||  ||| ||||||||||||| ||||  || | ||||    
T  12231558 tccaactcattaatctcgagatctttcttaatagtctctcttatagtttttctaagtattcctcc-acctttagtgatttgactacccttaatttgatct 12231460  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtcta-ggttctaccatcttttctattataggtgct-ccccgaa 208  Q
    ||||| ||||| ||| |||     || | |||||| |||||||||||||||||  || ||| | ||||||||| |||||||  ||||||| | |||| |     
T  12231459 actctccttacgacaaaatgtatagg-tcttctctttgcatgcccaaaccacc-cagactatgtttctaccatattttctacaataggtggtaccccaat 12231362  T
Q  209 ctctctctaatgt---catttctaattatatcgcgtctagtcttacc 252  Q
    ||| |||||||||   ||| ||||||||||||  |||||||||||||    
T  12231361 ctccctctaatgtctccatgtctaattatatcatgtctagtcttacc 12231315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 23791803 - 23791910
Alignment:
Q  82 tagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctacca 181  Q
    ||||||| ||||||  |||||||| |||||| ||||| |||||||||||| |  | | |||||| | ||||| |||||||||||||| |||  |||||||    
T  23791803 tagtgatctgactcatctccatctcatctacccttctaactacataatccacatg-tcttctctctacatgcacaaaccacctaagtttagtatctacca 23791901  T
Q  182 tcttttcta 190  Q
    |||||||||    
T  23791902 tcttttcta 23791910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 37463101 - 37463169
Alignment:
Q  152 gcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaatg 220  Q
    |||||||||||||||| |||  ||||||  ||||||||| |||||||||| ||| ||||||||||||||    
T  37463101 gcccaaaccacctaagcctattttctactgtcttttctactataggtgctaccccaactctctctaatg 37463169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 18793144 - 18793254
Alignment:
Q  79 ctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttcta 178  Q
    |||||||||| ||| | ||| |||||||||||||||||||||||||  ||   ||  || || |||| |||||||| ||| || |||||||||| |||||    
T  18793144 ctctagtgatctgagttcccgccatctaatctactcttcttactaccaaaattgcatgtctt-ctctctgcatgccaaaatcaactaagtctagtttcta 18793242  T
Q  179 ccatcttttcta 190  Q
    ||||||||||||    
T  18793243 ccatcttttcta 18793254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 216
Target Start/End: Original strand, 34792515 - 34792641
Alignment:
Q  89 ttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttc 188  Q
    ||||||| ||||||| | ||||||||||||||| ||   |||  ||||| || |||| | ||||||||||||| ||||| |||  |||||||| ||||||    
T  34792515 ttgactctcctccatttgatctactcttcttaccacggcatctacgggtctt-ctctctacatgcccaaaccatctaagcctactttctaccaacttttc 34792613  T
Q  189 tattataggtgctccccgaactctctct 216  Q
    || |||||||||| |||  |||||||||    
T  34792614 tactataggtgctacccccactctctct 34792641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 216
Target Start/End: Original strand, 27847972 - 27848097
Alignment:
Q  90 tgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttct 189  Q
    |||||| ||||||||| || |||||||| |||||||  |||  | ||| || |||| |||||||||||||||||||||  ||  ||||||||||||||||    
T  27847972 tgactctcctccatctgatatactcttcatactacagcatctacaggtctt-ctctctgcatgcccaaaccacctaagcttattttctaccatcttttct 27848070  T
Q  190 attataggtgctccccgaactctctct 216  Q
    |  | ||||||| ||  ||||||||||    
T  27848071 accacaggtgctaccacaactctctct 27848097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 17815529 - 17815419
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattatatcgcgtctag 245  Q
    ||||||||||||| ||||| |||| ||| ||||||||||| |||||| || || ||  | ||||||||||   |||||||||||||  |||| |||||||    
T  17815529 catgcccaaaccaactaagcctagtttccaccatcttttccattataagtcctacctcatctctctctaatattgtcatttctaatgctatcccgtctag 17815430  T
Q  246 tcttaccacaca 257  Q
    || |||||||||    
T  17815429 tc-taccacaca 17815419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 13827948 - 13828012
Alignment:
Q  155 caaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctctaat 219  Q
    ||||||||||||  |||| ||| ||||||||||||| |||||||||| ||| || ||||||||||    
T  13827948 caaaccacctaaccctagtttccaccatcttttctactataggtgctgccccaaatctctctaat 13828012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 30445304 - 30445256
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    |||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  30445304 tccaactcattaatctctagatccctcttgatagtttctcttatcgttt 30445256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 48431501 - 48431679
Alignment:
Q  17 tcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactctt 116  Q
    |||| |||||||| ||| ||||||| ||||||||||||||||| |   |||||||| | | ||||| || ||  ||||  ||||||||| ||| |||||     
T  48431501 tcataaatctctaaatctttcttaatagtttctcttatagtttttttgggtcttcctc-tacctcttgtaatccgactatcctccatctgatcaactctc 48431599  T
Q  117 cttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattatagg 197  Q
     |||||||| ||||  |  || || |||| | ||||||||||||||||||| |||  ||| ||||||||||||| ||||||    
T  48431600 tttactacaaaatctacaagtctt-ctctctacatgcccaaaccacctaagcctattttccaccatcttttctactatagg 48431679  T

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Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 51812594 - 51812469
Alignment:
Q  137 tttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaa--ctctctctaa---tgtcatttctaat 231  Q
    ||||||||| | |||||||||| ||| |||| |||| ||| ||||||||||||| ||||| || | ||| ||  ||||||||||    ||||||||||||    
T  51812594 tttttctctctacatgcccaaatcacataagcctagtttccaccatcttttctactatagttgttaccccaactctctctctaaagtagtcatttctaat 51812495  T
Q  232 tatatcgcgtctagtcttaccacaca 257  Q
      ||||| ||||| ||||||||||||    
T  51812494 cttatcgtgtctaatcttaccacaca 51812469  T

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Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 22090153 - 22090086
Alignment:
Q  149 catgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||||||||    
T  22090153 catgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctct 22090086  T

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Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 52561678 - 52561788
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||| ||||| ||| ||| ||| ||||||||||||||||| || | ||||| || || |||||  | || | |||| ||||||||| ||||    
T  52561678 tccaactcattaacctctaaatctttcctaacagtttctcttatagtttttctaagtctt-cctctacctcttctaatctaactctcctccatctgatct 52561776  T
Q  111 actcttcttact 122  Q
    ||||||| ||||    
T  52561777 actcttcgtact 52561788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6641314 - 6641213
Alignment:
Q  1 catgtctttctccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctc 100  Q
    |||| ||||||| |||||||| ||||||| ||  ||| | | ||||| ||||||||||| || |||||| ||| |  ||||||||||||||||| |||||    
T  6641314 catgcctttctcaaactcatttatctctatattattcctgacagtttttcttatagtttgtctaggtctacccaca-cctctagtgatttgacttccctc 6641216  T
Q  101 cat 103  Q
    |||    
T  6641215 cat 6641213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 195
Target Start/End: Original strand, 39422193 - 39422313
Alignment:
Q  73 ccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctag 172  Q
    |||| ||||| |||||||||||||||||||| | ||||| ||| || |||||||||||  |  | | |||||| | |||| || || |||||||||||||    
T  39422193 ccctacctctggtgatttgactcccctccatatgatctattctcctaactacataatctacatg-tcttctctctacatgtcc-aagcacctaagtctag 39422290  T
Q  173 gttctaccatcttttctattata 195  Q
     |||||| |||||||||| ||||    
T  39422291 tttctactatcttttctactata 39422313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 52561843 - 52561946
Alignment:
Q  156 aaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct--aatg---tcatttctaattatatcgcgtctagtctta 250  Q
    |||||||||||| |||  ||||| |||| |||||| || ||||||| ||| ||||||||||  ||||   ||||| ||||| ||||| ||||||||||||    
T  52561843 aaaccacctaagcctattttctatcatcatttctactaaaggtgctaccccaactctctctctaatggtgtcattcctaatcatatcccgtctagtctta 52561942  T
Q  251 ccac 254  Q
    ||||    
T  52561943 ccac 52561946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 6299485 - 6299526
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttata 55  Q
    |||||||||||||||||||| ||||||| | |||||||||||    
T  6299485 aactcattaatctctagatctttcttaacaatttctcttata 6299526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 8676954 - 8676999
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatag 56  Q
    ||||||||||||||||||| ||| || |||| ||||||||||||||    
T  8676954 tccaactcattaatctctaaatcttttttaatagtttctcttatag 8676999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 18469332 - 18469415
Alignment:
Q  174 ttctaccatcttttctattataggtgctccccgaactctctctaa---tgtcatttctaattatatcgcgtctagtcttaccac 254  Q
    ||||| |||||| |||| |||||||| | ||| ||||||||||||   ||||||| ||||| |||||  |||||||||||||||    
T  18469332 ttctatcatcttctctactataggtgttaccccaactctctctaattgtgtcattcctaatcatatcatgtctagtcttaccac 18469415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 29577231 - 29577292
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttcc 72  Q
    |||| |||||||||||||||||| ||||||| ||||| | || |||||| || |||||||||    
T  29577231 tccagctcattaatctctagatctttcttaatagtttatgttgtagtttttctaggtcttcc 29577292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 118
Target Start/End: Original strand, 32107731 - 32107764
Alignment:
Q  85 tgatttgactcccctccatctaatctactcttct 118  Q
    ||||||||||| ||||||||||||||||||||||    
T  32107731 tgatttgactctcctccatctaatctactcttct 32107764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 51812699 - 51812654
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||  |||||||| |||||||||||||||||||| ||||    
T  51812699 aactcattaacatctagatctttcttaaaagtttctcttatggttt 51812654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 990547 - 990595
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    |||||||||||||||||||||||  ||| || ||||||||| |||||||    
T  990547 tccaactcattaatctctagatctatctcaatagtttctctaatagttt 990595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 1661496 - 1661420
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||| ||||||| || || |||  ||| ||||||||||||| |||||||||| ||| ||||||||||    
T  1661496 ttctctctacatgctcaaaccatctgagcctattttccaccatcttttctactataggtgctaccccaactctctct 1661420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 3662567 - 3662515
Alignment:
Q  2 atgtctttctccaactcattaatctctagatccttcttaaaagtttctcttat 54  Q
    |||||||| || |||||||||||| ||||||||||||  | ||||||||||||    
T  3662567 atgtctttatcaaactcattaatcactagatccttctcgatagtttctcttat 3662515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 7922030 - 7921982
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagttt 59  Q
    ||||||||||||||||||||||| || |||  ||||||| |||||||||    
T  7922030 tccaactcattaatctctagatcgtttttactagtttcttttatagttt 7921982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 32231170 - 32231246
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||| ||||| |||  ||||||||  ||||||| |||||||||| |||  |||||||||    
T  32231170 ttctctctacatgcccaaaccatctaagcctattttctaccaatttttctactataggtgctacccccactctctct 32231246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 39140586 - 39140510
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||||||||| | |  || | |||||||||||| |||||||||| | | ||||||||||    
T  39140586 ttctctctacatgcccaaaccacctaagccaattttttgccatcttttctactataggtgctacgccaactctctct 39140510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 43375734 - 43375794
Alignment:
Q  70 tccccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatc 130  Q
    |||| |||||||||||||||| |||  || |||||| |||||||||  |||||||||||||    
T  43375734 tccctctgcctctagtgattttactatccaccatctgatctactctctttactacataatc 43375794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 49377480 - 49377417
Alignment:
Q  48 ctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctac 112  Q
    |||| ||||||| || ||||||||| | ||||||||||||||||||| | |||||||| ||||||    
T  49377480 ctctaatagtttttctaggtcttcctc-tgcctctagtgatttgactactctccatctgatctac 49377417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 51440981 - 51441057
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||| | |||  |||||||||    
T  51440981 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgttacccccactctctct 51441057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 201
Target Start/End: Complemental strand, 11986 - 11803
Alignment:
Q  15 actcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactc 114  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| || || |||| |   ||||||||||||||| ||| ||||||| |  ||||||||    
T  11986 actcattaatctctagatccttcttaatagtttctcttatagtttttctagttctt-cttttgcctctagtgatttcactaccctccaccggatctactc 11888  T
Q  115 ttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgct 201  Q
    | || | ||||||   |    | | |||||| | ||||||||||||||||||| | || | |||||||||||||||  |||||||||    
T  11887 tcctcaatacata--gctacagatcttctctctacatgcccaaaccacctaagccgagttcctaccatcttttctacaataggtgct 11803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 72 - 214
Target Start/End: Original strand, 44017 - 44158
Alignment:
Q  72 cccctgcctctagtgatttgactcccctccatctaatctactcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtcta 171  Q
    ||||| ||||||||||| |||||  |||||||||| |||||||| ||||||| | |||| |  || | |||||| | ||||||||||||||||||| |||    
T  44017 cccctacctctagtgatctgactatcctccatctagtctactctccttactagagaatctgaagg-tcttctctctacatgcccaaaccacctaagccta 44115  T
Q  172 ggttctaccatcttttctattataggtgctccccgaactctct 214  Q
      |||  |||||||||||| |||||||||| ||| ||||||||    
T  44116 ttttccgccatcttttctactataggtgctaccccaactctct 44158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 178509 - 178622
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||||||| || ||||||| | || |||||||||||| |||||  ||  ||||||||||    
T  178509 tccaactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtcttactcc-gcctctagtgatatgactatccgtcatctaatct 178607  T
Q  111 actcttcttactaca 125  Q
    | | | |||||||||    
T  178608 attgtccttactaca 178622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 31534 - 31458
Alignment:
Q  140 ttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaactctctct 216  Q
    |||||| | ||||||||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||||||||    
T  31534 ttctctctacatgcccaaaccatctaagcctattttctaccaacttttctactataggtgctacccccactctctct 31458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 1037 - 1244
Alignment:
Q  11 tccaactcattaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatct 110  Q
    ||||||||||| | ||||| ||| || ||||  |||||||| |||||||  | ||||||||| | | |||||  | |||||||||  |||||| | ||||    
T  1037 tccaactcattgacctctaaatcttttttaatggtttctctaatagttttcctaggtcttcctc-tacctcttttaatttgactcttctccatttgatct 1135  T
Q  111 actcttcttactacataatccgcgggtttttctctatgcatgcccaaaccacctaagtctaggttctaccatcttttctattataggtgctccccgaact 210  Q
    ||||||||||| ||   |||  ||||| || |||| | |||| |||||||| ||||| |||  |||||||| |||||||| |||||||||| |||  |||    
T  1136 actcttcttaccacggcatctacgggtctt-ctctctacatggccaaaccatctaagcctattttctaccaacttttctactataggtgctaccctcact 1234  T
Q  211 ctctctaatg 220  Q
    ||||||||||    
T  1235 ctctctaatg 1244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 2393 - 2436
Alignment:
Q  14 aactcattaatctctagatccttcttaaaagtttctcttatagt 57  Q
    |||||||||||||||||||| ||||||| ||| |||||||||||    
T  2393 aactcattaatctctagatctttcttaatagtctctcttatagt 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 101001 - 101050
Alignment:
Q  150 atgcccaaaccacctaagtctaggttctaccatcttttctattataggtg 199  Q
    |||||| |||||||||||||||| ||| ||||| ||||||| ||||||||    
T  101001 atgcccgaaccacctaagtctagtttcaaccattttttctactataggtg 101050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 346870 - 347016
Alignment:
Q  19 attaatctctagatccttcttaaaagtttctcttatagtttatccaggtcttccccctgcctctagtgatttgactcccctccatctaatctactcttct 118  Q
    ||||||||||||||| || |||| ||||| |||| |||||| || || ||||  | ||||| |||| ||| || || |||||||||| ||| ||||| ||    
T  346870 attaatctctagatcttttttaatagtttatcttgtagtttttctagatctt-tctctgcccctagcgatctgcctaccctccatctgatcaactctcct 346968  T
Q  119 tactacataatccgcgggtttttctctatgcatgcccaaaccacctaag 167  Q
    ||||||| ||||    || |||||||| | ||| |||||||||||||||    
T  346969 tactacagaatctatagg-ttttctctctacatacccaaaccacctaag 347016  T

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