View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7783_high_16 (Length: 267)

Name: NF7783_high_16
Description: NF7783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7783_high_16
NF7783_high_16
[»] chr8 (24 HSPs)
chr8 (58-248)||(21239239-21239427)
chr8 (1-52)||(21238050-21238101)
chr8 (1-50)||(40618850-40618899)
chr8 (1-46)||(3673704-3673749)
chr8 (1-41)||(470933-470973)
chr8 (1-49)||(3240644-3240692)
chr8 (3-46)||(24099038-24099081)
chr8 (1-47)||(28086592-28086638)
chr8 (1-46)||(10377937-10377982)
chr8 (1-46)||(15596934-15596979)
chr8 (1-50)||(17693390-17693439)
chr8 (1-46)||(27498147-27498192)
chr8 (1-46)||(30568102-30568147)
chr8 (6-46)||(7883022-7883062)
chr8 (1-37)||(34102530-34102566)
chr8 (6-40)||(27746887-27746921)
chr8 (1-46)||(1236479-1236524)
chr8 (1-46)||(9637190-9637235)
chr8 (6-46)||(14906689-14906729)
chr8 (1-37)||(19443843-19443879)
chr8 (1-41)||(23230906-23230946)
chr8 (180-244)||(30911384-30911448)
chr8 (1-37)||(34610110-34610146)
chr8 (1-41)||(40211086-40211126)
[»] chr6 (24 HSPs)
chr6 (1-47)||(31851663-31851709)
chr6 (1-48)||(31575337-31575384)
chr6 (1-39)||(33052958-33052996)
chr6 (1-46)||(7514986-7515031)
chr6 (1-46)||(31297081-31297126)
chr6 (1-46)||(32327003-32327048)
chr6 (1-41)||(29744497-29744537)
chr6 (1-41)||(32060138-32060178)
chr6 (6-53)||(4984326-4984373)
chr6 (1-51)||(606466-606516)
chr6 (187-241)||(3907554-3907608)
chr6 (1-46)||(3913357-3913402)
chr6 (6-47)||(8497239-8497280)
chr6 (1-46)||(9341434-9341479)
chr6 (1-46)||(12170730-12170775)
chr6 (1-38)||(14174862-14174899)
chr6 (1-38)||(14179398-14179435)
chr6 (5-46)||(19164830-19164871)
chr6 (5-46)||(29319660-29319701)
chr6 (1-50)||(34018822-34018871)
chr6 (6-46)||(3173978-3174018)
chr6 (193-241)||(17149586-17149634)
chr6 (6-50)||(17237048-17237092)
chr6 (6-46)||(23947083-23947123)
[»] chr5 (25 HSPs)
chr5 (1-46)||(10332331-10332376)
chr5 (1-46)||(13007489-13007534)
chr5 (1-41)||(8984777-8984817)
chr5 (1-46)||(6011921-6011966)
chr5 (1-46)||(8087996-8088041)
chr5 (1-46)||(9113508-9113553)
chr5 (1-46)||(38007617-38007662)
chr5 (6-46)||(7886706-7886746)
chr5 (180-228)||(21042668-21042716)
chr5 (1-37)||(27576160-27576196)
chr5 (2-41)||(10723022-10723061)
chr5 (1-40)||(13422192-13422231)
chr5 (1-40)||(14726250-14726289)
chr5 (1-35)||(4771116-4771150)
chr5 (1-47)||(6217158-6217204)
chr5 (6-48)||(21060047-21060089)
chr5 (1-52)||(31391545-31391598)
chr5 (187-241)||(36895438-36895492)
chr5 (1-46)||(26825690-26825735)
chr5 (6-51)||(30371894-30371939)
chr5 (1-46)||(39326670-39326715)
chr5 (2-46)||(177746-177790)
chr5 (1-37)||(7930414-7930450)
chr5 (1-37)||(24229576-24229612)
chr5 (6-46)||(43008081-43008121)
[»] chr4 (35 HSPs)
chr4 (1-46)||(32766795-32766840)
chr4 (1-41)||(9048955-9048995)
chr4 (1-41)||(44596940-44596980)
chr4 (6-41)||(3335935-3335970)
chr4 (1-46)||(4142547-4142592)
chr4 (1-46)||(6154992-6155037)
chr4 (1-46)||(19853295-19853340)
chr4 (1-46)||(40065977-40066022)
chr4 (1-46)||(53444400-53444445)
chr4 (1-37)||(56156440-56156476)
chr4 (1-48)||(17949104-17949151)
chr4 (1-48)||(17952956-17953003)
chr4 (1-40)||(21686031-21686070)
chr4 (3-46)||(36204163-36204206)
chr4 (1-51)||(13634396-13634446)
chr4 (1-35)||(28857681-28857715)
chr4 (132-162)||(48992474-48992504)
chr4 (1-46)||(2521060-2521105)
chr4 (188-241)||(7093390-7093443)
chr4 (1-46)||(10496617-10496662)
chr4 (1-46)||(36162003-36162048)
chr4 (1-34)||(36700504-36700537)
chr4 (1-38)||(51535507-51535543)
chr4 (1-46)||(53811299-53811344)
chr4 (6-46)||(2115354-2115394)
chr4 (5-49)||(9180735-9180779)
chr4 (6-46)||(9284194-9284234)
chr4 (6-46)||(9528643-9528683)
chr4 (202-242)||(19220561-19220601)
chr4 (6-46)||(25274166-25274206)
chr4 (1-37)||(26633463-26633499)
chr4 (6-46)||(38706476-38706516)
chr4 (1-41)||(47320201-47320241)
chr4 (6-38)||(52097690-52097722)
chr4 (1-37)||(56040438-56040474)
[»] chr2 (47 HSPs)
chr2 (193-242)||(8024799-8024848)
chr2 (1-46)||(37876390-37876435)
chr2 (1-46)||(37994554-37994599)
chr2 (1-41)||(41328010-41328050)
chr2 (6-49)||(18763744-18763787)
chr2 (3-50)||(26025258-26025305)
chr2 (1-46)||(4779024-4779069)
chr2 (1-46)||(5427653-5427698)
chr2 (1-46)||(24588005-24588050)
chr2 (1-46)||(29279349-29279394)
chr2 (1-46)||(32448401-32448446)
chr2 (1-46)||(33923976-33924021)
chr2 (1-49)||(31193117-31193165)
chr2 (1-40)||(7646749-7646788)
chr2 (6-41)||(9374334-9374369)
chr2 (1-52)||(11189404-11189454)
chr2 (6-49)||(27248914-27248957)
chr2 (2-33)||(37416992-37417023)
chr2 (6-48)||(4193112-4193154)
chr2 (1-39)||(31788727-31788765)
chr2 (4-46)||(34128457-34128499)
chr2 (6-40)||(36942912-36942946)
chr2 (9-47)||(42017674-42017712)
chr2 (1-46)||(1415828-1415873)
chr2 (1-46)||(4100601-4100646)
chr2 (1-46)||(4903929-4903974)
chr2 (180-241)||(8192481-8192542)
chr2 (1-46)||(10929935-10929980)
chr2 (1-46)||(19062132-19062177)
chr2 (1-46)||(24461710-24461755)
chr2 (172-241)||(32526215-32526284)
chr2 (1-50)||(36324124-36324173)
chr2 (1-46)||(37613892-37613937)
chr2 (1-46)||(38445437-38445482)
chr2 (180-248)||(4618808-4618876)
chr2 (1-41)||(12553958-12553998)
chr2 (1-41)||(14955811-14955851)
chr2 (6-46)||(22422003-22422043)
chr2 (1-37)||(25508861-25508897)
chr2 (8-40)||(27097206-27097238)
chr2 (1-49)||(27665970-27666017)
chr2 (1-37)||(30923250-30923286)
chr2 (6-46)||(31580421-31580461)
chr2 (6-46)||(33585519-33585559)
chr2 (6-46)||(33759968-33760008)
chr2 (6-46)||(36234273-36234313)
chr2 (1-49)||(43696302-43696349)
[»] chr1 (32 HSPs)
chr1 (1-42)||(50377587-50377628)
chr1 (1-41)||(27456753-27456793)
chr1 (1-41)||(47133166-47133206)
chr1 (2-41)||(32678932-32678971)
chr1 (1-48)||(49504376-49504423)
chr1 (6-52)||(20266577-20266623)
chr1 (1-38)||(26535600-26535637)
chr1 (1-46)||(34878061-34878106)
chr1 (1-41)||(5984080-5984120)
chr1 (1-41)||(39888446-39888486)
chr1 (4-39)||(5685686-5685721)
chr1 (8-46)||(8211090-8211128)
chr1 (6-52)||(33816928-33816974)
chr1 (6-52)||(33876398-33876444)
chr1 (6-48)||(48217712-48217754)
chr1 (9-46)||(1742563-1742600)
chr1 (3-40)||(5601025-5601062)
chr1 (1-38)||(12635433-12635470)
chr1 (1-46)||(32395261-32395306)
chr1 (1-46)||(33486678-33486723)
chr1 (1-46)||(39987688-39987733)
chr1 (3-55)||(9172762-9172814)
chr1 (3-55)||(9180744-9180796)
chr1 (1-37)||(11462274-11462310)
chr1 (1-37)||(21687642-21687678)
chr1 (6-46)||(30712075-30712115)
chr1 (6-46)||(30879350-30879390)
chr1 (1-37)||(36894200-36894236)
chr1 (1-41)||(40163218-40163258)
chr1 (1-41)||(41081475-41081515)
chr1 (1-41)||(44915903-44915943)
chr1 (3-47)||(45425832-45425875)
[»] chr7 (24 HSPs)
chr7 (1-41)||(17611657-17611697)
chr7 (1-47)||(11654074-11654120)
chr7 (3-53)||(35664912-35664962)
chr7 (1-46)||(9976993-9977038)
chr7 (1-46)||(28044539-28044584)
chr7 (1-46)||(28407701-28407746)
chr7 (6-47)||(39328576-39328617)
chr7 (1-46)||(48316602-48316647)
chr7 (1-41)||(1769074-1769114)
chr7 (5-41)||(41553224-41553260)
chr7 (1-49)||(48061685-48061733)
chr7 (1-48)||(24610040-24610087)
chr7 (9-47)||(11738646-11738684)
chr7 (6-40)||(24770521-24770555)
chr7 (5-46)||(4999801-4999842)
chr7 (3-36)||(5348391-5348424)
chr7 (1-46)||(11344083-11344128)
chr7 (1-46)||(12141090-12141135)
chr7 (5-46)||(23425139-23425180)
chr7 (1-46)||(24069173-24069218)
chr7 (6-46)||(21266663-21266703)
chr7 (6-46)||(26492636-26492676)
chr7 (186-230)||(37056230-37056274)
chr7 (6-46)||(42066828-42066868)
[»] chr3 (43 HSPs)
chr3 (2-46)||(21313297-21313341)
chr3 (1-53)||(52922893-52922945)
chr3 (1-47)||(20464747-20464793)
chr3 (1-47)||(43017148-43017194)
chr3 (1-46)||(628707-628752)
chr3 (1-46)||(6954479-6954524)
chr3 (1-46)||(9797317-9797362)
chr3 (1-37)||(14859755-14859791)
chr3 (1-49)||(21533589-21533637)
chr3 (1-37)||(23799740-23799776)
chr3 (1-37)||(46304313-46304349)
chr3 (1-41)||(47896411-47896451)
chr3 (1-52)||(105693-105743)
chr3 (3-41)||(17238070-17238108)
chr3 (3-41)||(20608686-20608724)
chr3 (1-47)||(31271614-31271660)
chr3 (180-242)||(50582998-50583060)
chr3 (180-241)||(4252526-4252587)
chr3 (1-46)||(10229736-10229781)
chr3 (1-46)||(24396283-24396327)
chr3 (6-47)||(25850066-25850107)
chr3 (1-46)||(35175663-35175708)
chr3 (1-46)||(36461220-36461265)
chr3 (1-46)||(36910549-36910594)
chr3 (1-46)||(38546059-38546104)
chr3 (1-46)||(40487585-40487630)
chr3 (1-50)||(50981113-50981161)
chr3 (1-50)||(51084247-51084295)
chr3 (6-46)||(2342716-2342756)
chr3 (6-46)||(4178833-4178873)
chr3 (1-41)||(10108496-10108536)
chr3 (1-41)||(10233330-10233370)
chr3 (6-46)||(12050431-12050471)
chr3 (1-53)||(14585896-14585946)
chr3 (6-46)||(25162704-25162744)
chr3 (1-37)||(26715914-26715950)
chr3 (1-49)||(31462402-31462450)
chr3 (6-46)||(38854805-38854845)
chr3 (1-37)||(41818486-41818522)
chr3 (1-41)||(46979771-46979811)
chr3 (1-41)||(47041836-47041876)
chr3 (5-37)||(47733369-47733401)
chr3 (1-41)||(48401526-48401566)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-40)||(53190-53229)
[»] scaffold0603 (1 HSPs)
scaffold0603 (1-46)||(7988-8033)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-41)||(4418-4458)
[»] scaffold0445 (1 HSPs)
scaffold0445 (6-41)||(1638-1673)
[»] scaffold0050 (1 HSPs)
scaffold0050 (3-46)||(65825-65868)
[»] scaffold0146 (1 HSPs)
scaffold0146 (3-41)||(16091-16129)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-51)||(9820-9870)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-46)||(37092-37137)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1-46)||(31057-31102)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-38)||(36464-36501)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-46)||(3817-3862)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-37)||(57881-57917)


Alignment Details
Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 58 - 248
Target Start/End: Original strand, 21239239 - 21239427
Alignment:
Q  58 tctatttaacaaatataatatatataacaactatannnnnnnaaggaatatacatagcaactattatatcactataaactatgcaaaagaaattaatatg 157  Q
    ||||||||||||| ||||||||||||||||||||        ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21239239 tctatttaacaaacataatatatataacaactat--ttttttaagaaatatacatagcaactattatatcactataaactatgcaaaagaaattaatatg 21239336  T
Q  158 tgatgtaaactacacatttagagttggcttagtgattggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgattttccctg 248  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21239337 tgatgtaaactacacatttagagttggcttagtggttggcttgcgatcttggagtgtgttcctttcaaggtttcaagtttgattttccctg 21239427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21238050 - 21238101
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataataa 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21238050 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataataa 21238101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40618899 - 40618850
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataat 50  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  40618899 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaataat 40618850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3673704 - 3673749
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  3673704 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 3673749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 470973 - 470933
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  470973 tatcaatttaaatgaatgaatattgttttgtttttgtcaaa 470933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3240644 - 3240692
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataa 49  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||||    
T  3240644 tatcaatttgaatgaatgaacatcgttttgtttttgtcaaaaaaaataa 3240692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 24099081 - 24099038
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||    
T  24099081 tcaatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 24099038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28086638 - 28086592
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    ||||||||||||| ||||||||| ||||||||||||||||| |||||    
T  28086638 tatcaatttgaataaatgaatatcgttttgtttttgtcaaaaaaaat 28086592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10377937 - 10377982
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  10377937 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 10377982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15596979 - 15596934
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||    
T  15596979 tatcaatttgaatgaatgaatatcgttttgttttcgtcaaaaaaaa 15596934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17693439 - 17693390
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataat 50  Q
    ||||||||||| ||||||||||| ||||||||||||||||| ||| ||||    
T  17693439 tatcaatttgagtgaatgaatatcgttttgtttttgtcaaaaaaattaat 17693390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27498192 - 27498147
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||    
T  27498192 tatcaatttgaatgaatgaatattattttatttttgtcaaaaaaaa 27498147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30568147 - 30568102
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||    
T  30568147 tatcaatttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 30568102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 7883062 - 7883022
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  7883062 atttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 7883022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34102530 - 34102566
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    |||||| ||||||||||||||||||||||||||||||    
T  34102530 tatcaacttgaatgaatgaatattgttttgtttttgt 34102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 27746921 - 27746887
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaa 40  Q
    |||||||||||||||||| ||||||||||||||||    
T  27746921 atttgaatgaatgaatatcgttttgtttttgtcaa 27746887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1236524 - 1236479
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| ||||||||||||||||||  |||||||||||||||| ||||    
T  1236524 tatcgatttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 1236479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9637235 - 9637190
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||| ||||||||||||| ||||||||||||| ||| ||||    
T  9637235 tatcaatttaaatgaatgaatatcgttttgtttttgtaaaaaaaaa 9637190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 14906729 - 14906689
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  14906729 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 14906689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19443879 - 19443843
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  19443879 tatcaatttgaatgaatgaatatcgttttatttttgt 19443843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23230906 - 23230946
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||| |||||||||||||||||| |||||| ||||||||||    
T  23230906 tatcgatttgaatgaatgaatatcgttttgcttttgtcaaa 23230946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 30911448 - 30911384
Alignment:
Q  180 gttggcttagtgattggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgattttc 244  Q
    |||||| || |||||| |||| ||||||||||| || |||| ||||||||||| ||| |||||||    
T  30911448 gttggcctaatgattgatttgagatcttggagtttgctcctctcaaggtttcatgtttgattttc 30911384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34610110 - 34610146
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  34610110 tatcaatttgaatgaataaatatcgttttgtttttgt 34610146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40211126 - 40211086
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||| |||||||||||||||||| |||||||||||| ||||    
T  40211126 tatcgatttgaatgaatgaatatcgttttgtttttgacaaa 40211086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31851709 - 31851663
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||    
T  31851709 tatcaatttgaatgaatgaatattattttgtttttgtcaaaaaaaat 31851663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31575384 - 31575337
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaata 48  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  31575384 tatcaatttgaatgaataaatattgttttgttcttgtaaaagaaaata 31575337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33052996 - 33052958
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtca 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  33052996 tatcaatttgaatgaatgaatatcgttttgtttttgtca 33052958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7515031 - 7514986
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  7515031 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 7514986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31297081 - 31297126
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||    
T  31297081 tatcaatttgaatgaatgaatatcgttttgtttttgtaaaaaaaaa 31297126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32327048 - 32327003
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  32327048 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 32327003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29744497 - 29744537
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  29744497 tatcaatttgaatgaatgaatattgttttgcctttgtcaaa 29744537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32060138 - 32060178
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  32060138 tatcaatttgaatgaatgaatatcgttttatttttgtcaaa 32060178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 4984373 - 4984326
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaataataaa 53  Q
    ||||||||||||||||||  |||| ||||||||||| |||||||||||    
T  4984373 atttgaatgaatgaatatcattttatttttgtcaaaaaaaataataaa 4984326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 606466 - 606516
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataata 51  Q
    |||| ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  606466 tatcgatttgaatgaatgaatatcattttgtttttgtcaaaaaaaaaaata 606516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 3907554 - 3907608
Alignment:
Q  187 tagtgattggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgatt 241  Q
    ||||| |||||||| |||||||| ||||| |||| ||||| ||||||||||||||    
T  3907554 tagtggttggtttgggatcttggggtgtgctcctctcaagatttcaagttcgatt 3907608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3913402 - 3913357
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||| ||||||||||| ||||    
T  3913402 tatcgatttgaatgaatgaatatcgttttatttttgtcaaaaaaaa 3913357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 8497239 - 8497280
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    ||||||||||||||||||  |||||||||||||||| |||||    
T  8497239 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaat 8497280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9341479 - 9341434
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||| ||| ||||||||||||||||| ||||    
T  9341479 tatcgatttgaatgaatgagtatcgttttgtttttgtcaaaaaaaa 9341434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12170730 - 12170775
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||| ||| ||||    
T  12170730 tatcgatttgaatgaatgaatatcgttttgtttttgtaaaataaaa 12170775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14174899 - 14174862
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtc 38  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  14174899 tatcgatttgaatgaatgaatatcgttttgtttttgtc 14174862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14179435 - 14179398
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtc 38  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  14179435 tatcgatttgaatgaatgaatatcgttttgtttttgtc 14179398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 19164830 - 19164871
Alignment:
Q  5 aatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||    
T  19164830 aatttgaatgaatgaatatcgttttgtttttgtaaaaaaaaa 19164871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 29319701 - 29319660
Alignment:
Q  5 aatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||||  |||||||||||||||| ||||    
T  29319701 aatttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 29319660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34018822 - 34018871
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataat 50  Q
    ||||||||| ||||||||||||| ||||||||||| ||||| | ||||||    
T  34018822 tatcaatttaaatgaatgaatatcgttttgtttttatcaaaaataataat 34018871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 3174018 - 3173978
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||| ||||||| |||||||||||||||| ||||    
T  3174018 atttgaatgaacgaatattattttgtttttgtcaaaaaaaa 3173978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 241
Target Start/End: Complemental strand, 17149634 - 17149586
Alignment:
Q  193 ttggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgatt 241  Q
    |||||||| |||||||||||||| |||| ||||||| ||| ||||||||    
T  17149634 ttggtttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 17149586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 17237092 - 17237048
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaataat 50  Q
    ||||||||||||||||||  ||||||| |||||||| ||||||||    
T  17237092 atttgaatgaatgaatatcattttgttgttgtcaaaaaaaataat 17237048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 23947123 - 23947083
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  23947123 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 23947083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10332376 - 10332331
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||    
T  10332376 tatcaatttgaatgaatggatattgttttgtttttgtcaaaaaaaa 10332331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13007489 - 13007534
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  13007489 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 13007534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8984817 - 8984777
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  8984817 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaa 8984777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6011966 - 6011921
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  6011966 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 6011921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8088041 - 8087996
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||    
T  8088041 tatcaatttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 8087996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9113553 - 9113508
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  9113553 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 9113508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38007617 - 38007662
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  38007617 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 38007662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 7886746 - 7886706
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  7886746 atttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 7886706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 21042716 - 21042668
Alignment:
Q  180 gttggcttagtgattggtttgcgatcttggagtgtgttcctttcaaggt 228  Q
    ||||| ||||||||||||||| ||||||||||| || ||||||||||||    
T  21042716 gttggtttagtgattggtttgggatcttggagtttgctcctttcaaggt 21042668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27576196 - 27576160
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    |||| ||||||||||||||||||||||||||||||||    
T  27576196 tatcgatttgaatgaatgaatattgttttgtttttgt 27576160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 10723022 - 10723061
Alignment:
Q  2 atcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||||||||||||||| ||||| |||||||||||||||||    
T  10723022 atcaatttgaatgaataaatatcgttttgtttttgtcaaa 10723061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 13422192 - 13422231
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaa 40  Q
    |||||||||||||||||||||||  |||||||||||||||    
T  13422192 tatcaatttgaatgaatgaatatcattttgtttttgtcaa 13422231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 14726289 - 14726250
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaa 40  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  14726289 tatcgatttgaatgaatgaatatcgttttgtttttgtcaa 14726250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 4771116 - 4771150
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgttttt 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  4771116 tatcaatttgaatgaatgaatatcgttttgttttt 4771150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6217158 - 6217204
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    ||||||||||||||||||||||| ||||| ||||||| ||| |||||    
T  6217158 tatcaatttgaatgaatgaatatcgttttatttttgttaaaaaaaat 6217204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 21060089 - 21060047
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaata 48  Q
    ||||||||||||||||||  |||||||||||||||| ||||||    
T  21060089 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaata 21060047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31391598 - 31391545
Alignment:
Q  1 tatcaatttgaat--gaatgaatattgttttgtttttgtcaaagaaaataataa 52  Q
    |||||||||||||  |||||||||| ||||||||||||||||| | ||||||||    
T  31391598 tatcaatttgaatctgaatgaatatcgttttgtttttgtcaaaaataataataa 31391545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 36895438 - 36895492
Alignment:
Q  187 tagtgattggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgatt 241  Q
    |||||||| | ||| |||||||||||||| |||| ||||||||||| ||||||||    
T  36895438 tagtgattagcttgggatcttggagtgtgctcctctcaaggtttcatgttcgatt 36895492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26825690 - 26825735
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||| ||||||||||| ||||    
T  26825690 tatcgatttgaatgaatgaatatcgttttatttttgtcaaaaaaaa 26825735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 30371894 - 30371939
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaataata 51  Q
    ||||||||||||||||||  |||||||||||||||| ||| |||||    
T  30371894 atttgaatgaatgaatatcattttgtttttgtcaaaaaaattaata 30371939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39326670 - 39326715
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||| ||||||||||||| ||||||||||||| ||| ||||    
T  39326670 tatcaatttaaatgaatgaatatcgttttgtttttgttaaaaaaaa 39326715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 177790 - 177746
Alignment:
Q  2 atcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||  |||| ||||||||||| ||||    
T  177790 atcaatttgaatgaatgaatatcattttttttttgtcaaaaaaaa 177746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7930414 - 7930450
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  7930414 tatcaatttgaatgaatgaatatcgttttgttcttgt 7930450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 24229612 - 24229576
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    |||| |||||||||||||||||| |||||||||||||    
T  24229612 tatcgatttgaatgaatgaatatcgttttgtttttgt 24229576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 43008121 - 43008081
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||| |||||||||||| ||| ||||    
T  43008121 atttgaatgaatgaatattattttgtttttgtaaaaaaaaa 43008081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32766795 - 32766840
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||    
T  32766795 tatcgatttgaatgaatgaatattgttttgtttttgtcaaaaaaaa 32766840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9048955 - 9048995
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  9048955 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaa 9048995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44596940 - 44596980
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  44596940 tatcaatttgaattaatgaatattgttttgtttttgtcaaa 44596980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 3335970 - 3335935
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||||||||||||||||||    
T  3335970 atttgaatgaatgaatattgttttgtttttgtcaaa 3335935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4142592 - 4142547
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  4142592 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 4142547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6155037 - 6154992
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||    
T  6155037 tatcaatttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 6154992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19853340 - 19853295
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  19853340 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 19853295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40066022 - 40065977
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||    
T  40066022 tatcgatttgaatgaatgaatattgttttgtttttgtaaaaaaaaa 40065977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 53444400 - 53444445
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| ||||||||||||||||||| |||||||||||||||| ||||    
T  53444400 tatctatttgaatgaatgaatattattttgtttttgtcaaaaaaaa 53444445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 56156476 - 56156440
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  56156476 tatcaatttgaatgaatgaatatcgttttgtttttgt 56156440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17949151 - 17949104
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaata 48  Q
    |||| |||||||||||||||||| ||||||||| ||||||| ||||||    
T  17949151 tatcgatttgaatgaatgaatatcgttttgtttctgtcaaaaaaaata 17949104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17953003 - 17952956
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaata 48  Q
    |||| |||||||||||||||||| ||||||||| ||||||| ||||||    
T  17953003 tatcgatttgaatgaatgaatatcgttttgtttctgtcaaaaaaaata 17952956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21686070 - 21686031
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaa 40  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  21686070 tatcgatttgaatgaatgaatatcgttttgtttttgtcaa 21686031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 36204206 - 36204163
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||    
T  36204206 tcaatttgaatgaaagaatatcgttttgtttttgtcaaaaaaaa 36204163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13634396 - 13634446
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataata 51  Q
    |||| ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  13634396 tatcgatttgaatgaatgaatatcattttgtttttgtcaaaaaaaaaaata 13634446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 28857681 - 28857715
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgttttt 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  28857681 tatcaatttgaatgaatgaatatcgttttgttttt 28857715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 162
Target Start/End: Complemental strand, 48992504 - 48992474
Alignment:
Q  132 taaactatgcaaaagaaattaatatgtgatg 162  Q
    |||||||||||||||||||||||||||||||    
T  48992504 taaactatgcaaaagaaattaatatgtgatg 48992474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2521060 - 2521105
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||| ||| ||||    
T  2521060 tatcgatttgaatgaatgaatatcgttttgtttttgtaaaaaaaaa 2521105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 7093390 - 7093443
Alignment:
Q  188 agtgattggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgatt 241  Q
    |||| |||| ||| |||||||||||||| |||||||||||||| | ||||||||    
T  7093390 agtggttggcttgggatcttggagtgtgctcctttcaaggttttaggttcgatt 7093443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10496617 - 10496662
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| |||||  |||||||||| ||||    
T  10496617 tatcaatttgaatgaatgaatatcgttttaattttgtcaaaaaaaa 10496662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36162003 - 36162048
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||||||||  |||| ||||||||||| ||||    
T  36162003 tatcaatttgaatgaatgaatatcattttatttttgtcaaaaaaaa 36162048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36700504 - 36700537
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttt 34  Q
    |||||||||||||||||||||||||||| |||||    
T  36700504 tatcaatttgaatgaatgaatattgtttcgtttt 36700537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 51535507 - 51535543
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtc 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  51535507 tatcaatttgaatgaat-aatattgttttgtttttgtc 51535543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 53811299 - 53811344
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||| ||||||||||||| ||||||||||||||||| ||||    
T  53811299 tatcgatttaaatgaatgaatatcgttttgtttttgtcaaaaaaaa 53811344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 2115394 - 2115354
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  2115394 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 2115354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 9180735 - 9180779
Alignment:
Q  5 aatttgaatgaatgaatattgttttgtttttgtcaaagaaaataa 49  Q
    ||||||||||||||||||| ||||| ||||||| ||| |||||||    
T  9180735 aatttgaatgaatgaatatcgttttatttttgtaaaataaaataa 9180779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 9284194 - 9284234
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  9284194 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 9284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 9528683 - 9528643
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  9528683 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 9528643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 19220561 - 19220601
Alignment:
Q  202 gatcttggagtgtgttcctttcaaggtttcaagttcgattt 242  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  19220561 gatcttggagtgtgctcctctcaaggtttcaggttcgattt 19220601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 25274166 - 25274206
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  25274166 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 25274206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26633499 - 26633463
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    |||| |||||||||||||||||| |||||||||||||    
T  26633499 tatcgatttgaatgaatgaatatcgttttgtttttgt 26633463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 38706516 - 38706476
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  38706516 atttgaatgaatgaatatgattttgtttttgtcaaaaaaaa 38706476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47320241 - 47320201
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||| ||||||||||||||||||  ||||||||||||||||    
T  47320241 tatcgatttgaatgaatgaatataattttgtttttgtcaaa 47320201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 38
Target Start/End: Complemental strand, 52097722 - 52097690
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtc 38  Q
    |||||||||||||||||| ||||||||||||||    
T  52097722 atttgaatgaatgaatatcgttttgtttttgtc 52097690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 56040474 - 56040438
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    |||| |||||||||||||||||| |||||||||||||    
T  56040474 tatcgatttgaatgaatgaatatcgttttgtttttgt 56040438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 8024848 - 8024799
Alignment:
Q  193 ttggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgattt 242  Q
    |||||||||||| |||||||||||| || |||||||||||||||||||||    
T  8024848 ttggtttgcgatgttggagtgtgtttctctcaaggtttcaagttcgattt 8024799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37876435 - 37876390
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  37876435 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 37876390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37994554 - 37994599
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  37994554 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 37994599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41328010 - 41328050
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  41328010 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaa 41328050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 18763744 - 18763787
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaataa 49  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  18763744 atttgaatgaatgaatatcgttttgtttttgtcaaaaaaaataa 18763787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 26025305 - 26025258
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataat 50  Q
    |||||||||||||||||||||  |||||||||||||||| ||||||||    
T  26025305 tcaatttgaatgaatgaatatcattttgtttttgtcaaaaaaaataat 26025258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4779024 - 4779069
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  4779024 tatcgatttgaatgaatgaatatagttttgtttttgtcaaaaaaaa 4779069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5427698 - 5427653
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  5427698 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 5427653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24588005 - 24588050
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  24588005 tatcaatttgaataaatgaatgttgttttgtttttgtcaaaaaaaa 24588050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29279394 - 29279349
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||    
T  29279394 tatcaatttgaatgaatgaatatcgtttagtttttgtcaaaaaaaa 29279349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32448446 - 32448401
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||    
T  32448446 tatcaatttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 32448401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33923976 - 33924021
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  33923976 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 33924021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31193165 - 31193117
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataa 49  Q
    |||| |||||||||||||||||| ||||||||||||| ||| |||||||    
T  31193165 tatcgatttgaatgaatgaatatcgttttgtttttgtaaaaaaaaataa 31193117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 7646749 - 7646788
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaa 40  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  7646749 tatcgatttgaatgaatgaatatcgttttgtttttgtcaa 7646788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 9374369 - 9374334
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||||||||||||||||| |||||||||||||||||    
T  9374369 atttgaatgaatgaatatcgttttgtttttgtcaaa 9374334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11189454 - 11189404
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataataa 52  Q
    ||||||||  ||| ||||||||||||||||||||||||||| ||||||||||    
T  11189454 tatcaattaaaataaatgaatattgttttgtttttgtcaaa-aaaataataa 11189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 27248957 - 27248914
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaataa 49  Q
    ||||||||||||||||||  |||||||||||||||| |||||||    
T  27248957 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaataa 27248914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 37416992 - 37417023
Alignment:
Q  2 atcaatttgaatgaatgaatattgttttgttt 33  Q
    ||||||||||||||||||||||||||||||||    
T  37416992 atcaatttgaatgaatgaatattgttttgttt 37417023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 4193112 - 4193154
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaata 48  Q
    ||||||||||||||||||  |||||||||||||||| ||||||    
T  4193112 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaata 4193154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31788727 - 31788765
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtca 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  31788727 tatcgatttgaatgaatgaatatcgttttgtttttgtca 31788765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 34128499 - 34128457
Alignment:
Q  4 caatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||    
T  34128499 caatttgaatgaataaatattgttttgtttttgtaaaaaaaaa 34128457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 36942946 - 36942912
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaa 40  Q
    |||||||||||||||||| ||||||||||||||||    
T  36942946 atttgaatgaatgaatatcgttttgtttttgtcaa 36942912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 42017712 - 42017674
Alignment:
Q  9 tgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  42017712 tgaatgaatgaatatcgttttgtttttgtcaaaaaaaat 42017674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1415828 - 1415873
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| ||||||||||||||||||  |||||||||||||||| ||||    
T  1415828 tatcgatttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 1415873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4100601 - 4100646
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||| ||||| ||||    
T  4100601 tatcgatttgaatgaatgaatatcgttttgtttttttcaaaaaaaa 4100646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4903974 - 4903929
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||| ||||||||||||| ||||||||||||| ||| ||||    
T  4903974 tatcaatttaaatgaatgaatatcgttttgtttttgtaaaaaaaaa 4903929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 8192542 - 8192481
Alignment:
Q  180 gttggcttagtgattggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgatt 241  Q
    |||||| ||||| |||| ||| |||||||||||||| |||| ||||||| ||| ||||||||    
T  8192542 gttggcctagtggttggcttgggatcttggagtgtgctcctctcaaggtctcaggttcgatt 8192481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10929935 - 10929980
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||| ||||||||||  |||||||||||||||| ||||    
T  10929935 tatcaatttgaacgaatgaatatctttttgtttttgtcaaaaaaaa 10929980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19062177 - 19062132
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||| ||||||||||||||||||| ||||||| ||| ||||    
T  19062177 tatcaatttaaatgaatgaatattgttttatttttgtaaaaaaaaa 19062132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24461710 - 24461755
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| ||||| ||||||| ||| ||||    
T  24461710 tatcaatttgaatgaatgaatatcgttttatttttgtaaaaaaaaa 24461755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 32526284 - 32526215
Alignment:
Q  172 catttagagttggcttagtgattggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgatt 241  Q
    ||||| |||||||||||||| ||| |||| ||||||| ||| || |||| ||||||| ||| ||||||||    
T  32526284 catttggagttggcttagtggttgatttgggatcttgaagtttgctcctctcaaggtctcaggttcgatt 32526215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36324124 - 36324173
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataat 50  Q
    ||||||||||||| |||| |||| ||||||||||||||||| | ||||||    
T  36324124 tatcaatttgaataaatgtatatcgttttgtttttgtcaaaaataataat 36324173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37613937 - 37613892
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| ||||||||| |||||||| ||||||||||||||||| ||||    
T  37613937 tatcgatttgaatggatgaatatggttttgtttttgtcaaaaaaaa 37613892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38445437 - 38445482
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||| ||| ||||    
T  38445437 tatcgatttgaatgaatgaatatcgttttgtttttgtaaaaaaaaa 38445482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 248
Target Start/End: Complemental strand, 4618876 - 4618808
Alignment:
Q  180 gttggcttagtgattggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgattttccctg 248  Q
    |||||| ||||| |||| |||  |||||||||| || |||| ||||||||||| ||||||||| |||||    
T  4618876 gttggcctagtggttggcttggaatcttggagtatgctcctctcaaggtttcaggttcgatttcccctg 4618808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12553998 - 12553958
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||||||||||||||||||||||  |||| |||||||||||    
T  12553998 tatcaatttgaatgaatgaatatcattttatttttgtcaaa 12553958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14955811 - 14955851
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||| |||||||||||||  ||||||||||||||||    
T  14955811 tatcaatttaaatgaatgaatatcattttgtttttgtcaaa 14955851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 22422003 - 22422043
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  22422003 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 22422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25508897 - 25508861
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  25508897 tatcaatttgaatgaataaatatcgttttgtttttgt 25508861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 27097238 - 27097206
Alignment:
Q  8 ttgaatgaatgaatattgttttgtttttgtcaa 40  Q
    |||||||||||||||| ||||||||||||||||    
T  27097238 ttgaatgaatgaatatcgttttgtttttgtcaa 27097206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27665970 - 27666017
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataa 49  Q
    |||||||| |||||||||||||||| ||| ||||||||||| |||||||    
T  27665970 tatcaattagaatgaatgaatattg-tttatttttgtcaaaaaaaataa 27666017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30923286 - 30923250
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    |||||||||||||||||||||||  ||||||||||||    
T  30923286 tatcaatttgaatgaatgaatatcattttgtttttgt 30923250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 31580461 - 31580421
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  31580461 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 31580421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 33585559 - 33585519
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||| |||||| ||||||||||||||||| ||||    
T  33585559 atttgaatgaaagaatatcgttttgtttttgtcaaaaaaaa 33585519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 33760008 - 33759968
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||| |||||||||||| ||| ||||    
T  33760008 atttgaatgaatgaatattattttgtttttgtaaaaaaaaa 33759968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 36234273 - 36234313
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  36234273 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 36234313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43696302 - 43696349
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataa 49  Q
    ||||||||||||||||||||||| | ||| ||||||||||| |||||||    
T  43696302 tatcaatttgaatgaatgaatatcg-tttatttttgtcaaaaaaaataa 43696349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 50377587 - 50377628
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaag 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  50377587 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaag 50377628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27456753 - 27456793
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  27456753 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaa 27456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47133166 - 47133206
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  47133166 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaa 47133206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 32678971 - 32678932
Alignment:
Q  2 atcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  32678971 atcaatttgaatgaatgaatatcgttttgtttttgtcaaa 32678932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 49504423 - 49504376
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaata 48  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||    
T  49504423 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaata 49504376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 20266577 - 20266623
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaataataa 52  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||    
T  20266577 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaataataa 20266623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 26535600 - 26535637
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtc 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  26535600 tatcaatttgaatgaatgaatatcgttttgtttttgtc 26535637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34878106 - 34878061
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  34878106 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 34878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5984080 - 5984120
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  5984080 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaa 5984120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39888446 - 39888486
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||||||||| |||||||||||| |||||||||||||||||    
T  39888446 tatcaatttgtatgaatgaatatcgttttgtttttgtcaaa 39888486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 5685721 - 5685686
Alignment:
Q  4 caatttgaatgaatgaatattgttttgtttttgtca 39  Q
    |||||||||||||||||||| |||||||||||||||    
T  5685721 caatttgaatgaatgaatatcgttttgtttttgtca 5685686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 8211128 - 8211090
Alignment:
Q  8 ttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  8211128 ttgattgaatgaatattgttttgtttttgtcaaaaaaaa 8211090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 33816974 - 33816928
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaataataa 52  Q
    ||||||||||||||| ||  |||||||||||||||| ||||||||||    
T  33816974 atttgaatgaatgaagatcattttgtttttgtcaaaaaaaataataa 33816928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 33876444 - 33876398
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaataataa 52  Q
    ||||||||||||||| ||  |||||||||||||||| ||||||||||    
T  33876444 atttgaatgaatgaagatcattttgtttttgtcaaaaaaaataataa 33876398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 48217712 - 48217754
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaata 48  Q
    ||||||||||||||||||  |||||||||||||||| ||||||    
T  48217712 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaata 48217754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 1742563 - 1742600
Alignment:
Q  9 tgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  1742563 tgaatgaataaatattgttttgtttttgtcaaaaaaaa 1742600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 5601025 - 5601062
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaa 40  Q
    ||||||| || |||||||||||||||||||||||||||    
T  5601025 tcaatttaaacgaatgaatattgttttgtttttgtcaa 5601062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12635433 - 12635470
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtc 38  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  12635433 tatcaatttaaatgaatgaatatcgttttgtttttgtc 12635470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32395261 - 32395306
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| ||||||||| |||||||| ||||||||||||||||| ||||    
T  32395261 tatcgatttgaatggatgaatatcgttttgtttttgtcaaaaaaaa 32395306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33486723 - 33486678
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| ||||| ||||||| ||| ||||    
T  33486723 tatcaatttgaatgaatgaatatcgttttttttttgtaaaaaaaaa 33486678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39987688 - 39987733
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| |||||| |||||| ||| ||||    
T  39987688 tatcaatttgaatgaatgaatatcgttttggttttgtaaaaaaaaa 39987733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 9172762 - 9172814
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataataaaga 55  Q
    |||||||||||||||||||||  |||| ||||||||||| |||| || |||||    
T  9172762 tcaatttgaatgaatgaatatctttttatttttgtcaaaaaaaaaaaaaaaga 9172814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 9180744 - 9180796
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataataaaga 55  Q
    |||||||||||||||||||||  |||| ||||||||||| |||| || |||||    
T  9180744 tcaatttgaatgaatgaatatctttttatttttgtcaaaaaaaaaaaaaaaga 9180796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11462310 - 11462274
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    |||| |||||||||||||||||| |||||||||||||    
T  11462310 tatcgatttgaatgaatgaatatcgttttgtttttgt 11462274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21687642 - 21687678
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    |||| |||||||||||||||||| |||||||||||||    
T  21687642 tatcgatttgaatgaatgaatatcgttttgtttttgt 21687678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 30712115 - 30712075
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  30712115 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 30712075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 30879350 - 30879390
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  30879350 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 30879390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 36894236 - 36894200
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    |||| |||||||||||||||||| |||||||||||||    
T  36894236 tatcgatttgaatgaatgaatatcgttttgtttttgt 36894200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40163258 - 40163218
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||||| |||||| |||| |||||    
T  40163258 tatcaatttgaatgaatgaatatcgttttgcttttatcaaa 40163218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41081515 - 41081475
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||| ||||||||||||||||||  ||||||||||||||||    
T  41081515 tatcgatttgaatgaatgaatatcattttgtttttgtcaaa 41081475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44915903 - 44915943
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||||||||||||||||||||||  |||| |||||||||||    
T  44915903 tatcaatttgaatgaatgaatatcattttatttttgtcaaa 44915943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 45425875 - 45425832
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    |||||||||||||||||||| | |||||||||||||||| |||||    
T  45425875 tcaatttgaatgaatgaata-tattttgtttttgtcaaaaaaaat 45425832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17611657 - 17611697
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  17611657 tatcaatttgaatgaatgaatatcgttttgtttttgtcaaa 17611697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11654074 - 11654120
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    |||||||||||||||||||||||||||||| |||||| ||| |||||    
T  11654074 tatcaatttgaatgaatgaatattgttttgcttttgtaaaaaaaaat 11654120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 35664962 - 35664912
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataataaa 53  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||| |||||    
T  35664962 tcaatttaaatgaataaatattgttttgtttttgtcaaaaaaaattataaa 35664912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9977038 - 9976993
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  9977038 tatcaatttaaatgaatgaatatcgttttgtttttgtcaaaaaaaa 9976993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28044584 - 28044539
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  28044584 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 28044539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28407746 - 28407701
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  28407746 tatcaatttgaatgaatgaatatcgttttgtttttatcaaaaaaaa 28407701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 39328617 - 39328576
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  39328617 atttgaatgaatgaatatcgttttgtttttgtcaaaaaaaat 39328576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48316647 - 48316602
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  48316647 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 48316602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1769114 - 1769074
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  1769114 tatcaatttgaatgaatgaatgtcgttttgtttttgtcaaa 1769074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 41553260 - 41553224
Alignment:
Q  5 aatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||| |||||||||||||||||    
T  41553260 aatttgaatgaatgaatatcgttttgtttttgtcaaa 41553224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 48061685 - 48061733
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataa 49  Q
    |||| |||||||||||||||||| ||||||||||||| ||| |||||||    
T  48061685 tatcgatttgaatgaatgaatatcgttttgtttttgtaaaaaaaaataa 48061733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24610087 - 24610040
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaata 48  Q
    |||||||||||||||||||||||  |||| ||||||||||| ||||||    
T  24610087 tatcaatttgaatgaatgaatatcattttatttttgtcaaaaaaaata 24610040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 11738646 - 11738684
Alignment:
Q  9 tgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  11738646 tgaatgaatgaatattgtttagtttttgtcaaaaaaaat 11738684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 24770521 - 24770555
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaa 40  Q
    |||||||||||||||||| ||||||||||||||||    
T  24770521 atttgaatgaatgaatatcgttttgtttttgtcaa 24770555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 4999842 - 4999801
Alignment:
Q  5 aatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||    
T  4999842 aatttgaatgaatgaatatcgttttgtttttgtaaaaaaaaa 4999801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 5348424 - 5348391
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttg 36  Q
    ||||||||||||||||| ||||||||||||||||    
T  5348424 tcaatttgaatgaatgagtattgttttgtttttg 5348391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11344083 - 11344128
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||| ||||||||| ||||||||||||| ||| ||||    
T  11344083 tatcaatttgaataaatgaatatcgttttgtttttgtaaaaaaaaa 11344128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12141135 - 12141090
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||| ||| ||||    
T  12141135 tatcgatttgaatgaatgaatatcgttttgtttttgtaaaaaaaaa 12141090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 23425180 - 23425139
Alignment:
Q  5 aatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||||  |||||||||||||||| ||||    
T  23425180 aatttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 23425139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24069218 - 24069173
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||| ||||||||| ||||||||||||| ||||||||    
T  24069218 tatcgatttgaatcaatgaatatcgttttgtttttgtaaaagaaaa 24069173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 21266663 - 21266703
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  21266663 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 21266703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 26492636 - 26492676
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  26492636 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 26492676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 37056230 - 37056274
Alignment:
Q  186 ttagtgattggtttgcgatcttggagtgtgttcctttcaaggttt 230  Q
    |||||| |||||||| |||||||||||||| |||| |||||||||    
T  37056230 ttagtggttggtttgtgatcttggagtgtgctcctctcaaggttt 37056274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 42066868 - 42066828
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  42066868 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 42066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000006; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 21313297 - 21313341
Alignment:
Q  2 atcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||    
T  21313297 atcaatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 21313341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 52922945 - 52922893
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataataaa 53  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||| ||||||    
T  52922945 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaaaaataaa 52922893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 20464793 - 20464747
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||    
T  20464793 tatcaatttgaatgaatgaatatcattttgtttttgtcaaaaaaaat 20464747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43017148 - 43017194
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||    
T  43017148 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaat 43017194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 628752 - 628707
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||    
T  628752 tatcaatttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 628707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6954524 - 6954479
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  6954524 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 6954479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9797362 - 9797317
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  9797362 tatcgatttgaatgaatgaatatcgttttgtttttgtcaaaaaaaa 9797317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 14859755 - 14859791
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  14859755 tatcaatttgaatgaatgaatattgttctgtttttgt 14859791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21533637 - 21533589
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataa 49  Q
    |||| ||||||||||||||||||  |||||||||||||||| |||||||    
T  21533637 tatcgatttgaatgaatgaatatcattttgtttttgtcaaaaaaaataa 21533589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23799776 - 23799740
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  23799776 tatcaatttgaatgaatgaatatcgttttgtttttgt 23799740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 46304349 - 46304313
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  46304349 tatcaatttgaatgaatgaatatcgttttgtttttgt 46304313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47896411 - 47896451
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  47896411 tatcaatttgaatcaatgaatatcgttttgtttttgtcaaa 47896451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 105743 - 105693
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataataa 52  Q
    ||||||||||||||||||||||||| ||| ||||||||||| | ||||||||    
T  105743 tatcaatttgaatgaatgaatattg-tttatttttgtcaaaaataataataa 105693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 17238070 - 17238108
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  17238070 tcaatttgaatgaatgaatatcattttgtttttgtcaaa 17238108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 20608724 - 20608686
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  20608724 tcaatttgattgaatgaatatcgttttgtttttgtcaaa 20608686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 31271660 - 31271614
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    ||||||||| ||||||||||||||||||| ||||| ||||| |||||    
T  31271660 tatcaatttaaatgaatgaatattgttttatttttatcaaaaaaaat 31271614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 50582998 - 50583060
Alignment:
Q  180 gttggcttagtgattggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgattt 242  Q
    |||||| ||||| |||||||| ||||||||||| || |||| | ||||||||| |||||||||    
T  50582998 gttggcctagtggttggtttgggatcttggagtttgctcctcttaaggtttcaggttcgattt 50583060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 4252587 - 4252526
Alignment:
Q  180 gttggcttagtgattggtttgcgatcttggagtgtgttcctttcaaggtttcaagttcgatt 241  Q
    |||||| ||||| |||| ||| |||||||||||||| |||| ||||||| ||||||| ||||    
T  4252587 gttggcctagtggttggcttgagatcttggagtgtgctcctctcaaggtctcaagtttgatt 4252526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10229736 - 10229781
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||| ||||||||||| ||||    
T  10229736 tatcgatttgaatgaatgaatatcgttttatttttgtcaaaaaaaa 10229781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24396327 - 24396283
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||    
T  24396327 tatcaatttgaattaatgaatatcgttttgtttttgt-aaagaaaa 24396283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 25850066 - 25850107
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaat 47  Q
    |||||||||||||||||| ||||||||||||| ||| |||||    
T  25850066 atttgaatgaatgaatatcgttttgtttttgtgaaaaaaaat 25850107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35175663 - 35175708
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| ||||| ||||||| ||| ||||    
T  35175663 tatcaatttgaatgaatgaatatcgttttatttttgtaaaaaaaaa 35175708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36461265 - 36461220
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||| |||||||||||| |||||| ||| ||||    
T  36461265 tatcaatttgaatgaattaatattgttttgattttgtaaaaaaaaa 36461220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36910594 - 36910549
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||| ||||||||||| ||||    
T  36910594 tatcgatttgaatgaatgaatatcgttttatttttgtcaaaaaaaa 36910549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38546059 - 38546104
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||| ||||| ||||||||||||||||| ||||    
T  38546059 tatcgatttgaatgaataaatatcgttttgtttttgtcaaaaaaaa 38546104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40487585 - 40487630
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| |||||||||||||||||| ||||||||||||| ||| ||||    
T  40487585 tatcgatttgaatgaatgaatatcgttttgtttttgtaaaaaaaaa 40487630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 50981161 - 50981113
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataat 50  Q
    ||||||||||||||||||||||| ||||  ||||||||||| ||||||||    
T  50981161 tatcaatttgaatgaatgaatatcgtttattttttgtcaaa-aaaataat 50981113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 51084295 - 51084247
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataat 50  Q
    ||||||||||||||||||||||| ||||  ||||||||||| ||||||||    
T  51084295 tatcaatttgaatgaatgaatatcgtttattttttgtcaaa-aaaataat 51084247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 2342716 - 2342756
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  2342716 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 2342756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 4178833 - 4178873
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  4178833 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 4178873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10108496 - 10108536
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||| |||||||||||||||||| ||||| |||||||||||    
T  10108496 tatcgatttgaatgaatgaatatcgttttatttttgtcaaa 10108536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10233330 - 10233370
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||| |||||||||||||||||| ||||| |||||||||||    
T  10233330 tatcgatttgaatgaatgaatatcgttttatttttgtcaaa 10233370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 12050471 - 12050431
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    |||| ||||||||||||| ||||||||||||||||| ||||    
T  12050471 atttaaatgaatgaatatcgttttgtttttgtcaaaaaaaa 12050431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14585896 - 14585946
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataataaa 53  Q
    ||||||||||||||||||||||| | ||| ||||||||||| |||||||||||    
T  14585896 tatcaatttgaatgaatgaatatcg-tttatttttgtcaaa-aaaataataaa 14585946  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 25162704 - 25162744
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  25162704 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 25162744  T

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Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26715950 - 26715914
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    |||||||||||||||  ||||||||||||||||||||    
T  26715950 tatcaatttgaatgaccgaatattgttttgtttttgt 26715914  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31462450 - 31462402
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataa 49  Q
    ||||||||||||||||||||||| ||||  ||||||| ||| |||||||    
T  31462450 tatcaatttgaatgaatgaatatcgtttactttttgtaaaataaaataa 31462402  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 38854845 - 38854805
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  38854845 atttgaatgaatgaatatcattttgtttttgtcaaaaaaaa 38854805  T

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Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 41818486 - 41818522
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  41818486 tatcaatttgaatgaatgaatatcgttttgcttttgt 41818522  T

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Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46979811 - 46979771
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||| |||||||||| || |||||||||||||||||    
T  46979811 tatcaattttaatgaatgaaaatagttttgtttttgtcaaa 46979771  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47041876 - 47041836
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||| ||||||||||||||||||  ||||||||||||||||    
T  47041876 tatctatttgaatgaatgaatatcattttgtttttgtcaaa 47041836  T

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Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 47733369 - 47733401
Alignment:
Q  5 aatttgaatgaatgaatattgttttgtttttgt 37  Q
    ||||||||||||||||||| |||||||||||||    
T  47733369 aatttgaatgaatgaatatcgttttgtttttgt 47733401  T

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Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 48401526 - 48401566
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    ||||||||||||||||||||||| ||||  |||||||||||    
T  48401526 tatcaatttgaatgaatgaatatcgtttattttttgtcaaa 48401566  T

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Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 53229 - 53190
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaa 40  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  53229 tatcaatttgaatgaatgaatatcgttttgtttttgtcaa 53190  T

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Target: scaffold0603 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7988 - 8033
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  7988 tatcaatttgaatgaatgaatatcgttttttttttgtcaaaaaaaa 8033  T

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Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4418 - 4458
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  4418 tatcaatttgaatgaatgaatattattttgcttttgtcaaa 4458  T

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Target: scaffold0445 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 1638 - 1673
Alignment:
Q  6 atttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||||||||||||||||| |||||||||||||||||    
T  1638 atttgaatgaatgaatatcgttttgtttttgtcaaa 1673  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 65868 - 65825
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||    
T  65868 tcaatttcaatgaatgaatattgttttgtttttgtaaaaaaaaa 65825  T

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Target: scaffold0146 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 16129 - 16091
Alignment:
Q  3 tcaatttgaatgaatgaatattgttttgtttttgtcaaa 41  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  16129 tcaatttgaatgaatgaatatcattttgtttttgtcaaa 16091  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9870 - 9820
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaataata 51  Q
    |||| |||||||||||||||||||||||||| ||||| ||| |||| ||||    
T  9870 tatcgatttgaatgaatgaatattgttttgtctttgtaaaaaaaaaaaata 9820  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37092 - 37137
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||| | |||||||||| |||||||||||||||| ||||    
T  37092 tatcaatttgatttaatgaatattattttgtttttgtcaaaaaaaa 37137  T

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Target: scaffold0121 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31102 - 31057
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| ||||| ||||||| ||| ||||    
T  31102 tatcaatttgaatgaatgaatatcgttttatttttgtaaaaaaaaa 31057  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36501 - 36464
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtc 38  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  36501 tatcaatttgaatgaaagaatatcgttttgtttttgtc 36464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3862 - 3817
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgtcaaagaaaa 46  Q
    ||||||||||||||||||||||| || ||| |||||||||| ||||    
T  3862 tatcaatttgaatgaatgaatatcgtattgcttttgtcaaaaaaaa 3817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 57917 - 57881
Alignment:
Q  1 tatcaatttgaatgaatgaatattgttttgtttttgt 37  Q
    ||||||||| ||||||||||||| |||||||||||||    
T  57917 tatcaatttaaatgaatgaatatcgttttgtttttgt 57881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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