View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7783_high_4 (Length: 422)
Name: NF7783_high_4
Description: NF7783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7783_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 1 - 416
Target Start/End: Complemental strand, 3747912 - 3747497
Alignment:
| Q |
1 |
tgtgccaatatatcgccgtcaatctgcaagcgacctaatcctccgactgaaacctactacaagttatataaaaccttccataaacgccagcaacgtagaa |
100 |
Q |
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|||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3747912 |
tgtgccaatagatggccgtcaatctgcaagcgacctaatcctctgactgaaacctactacaagttatataaaaccttccataaacgccagcaacgtagaa |
3747813 |
T |
|
| Q |
101 |
ctcttctccctccgagaatttcctttgatgatttggagtttttcattgacatttgggctgaagatatacttctcttctcggaagcggtgtctggctctgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
3747812 |
ctcttctccctccgagaatttcctttgatgatttggagtttttcattgacatttgggctgaagatattcttctcttctcggaagcggtgtctggctctgt |
3747713 |
T |
|
| Q |
201 |
cctgcaatccggttttagaagtccagcttctggagtttgtgacttgctcaaatatcaccttgagagttctgaatacaagatgacttttccggttgaacct |
300 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3747712 |
cctgcaatcaggttttagaagtccagcttctggagtttgtgacttgctcaaatatcaccttgagagttctgaatacaagatgacttttccggttgaacct |
3747613 |
T |
|
| Q |
301 |
aggtttactatcccttcaggacaaaatcagaatgttagtgtctctgtgatggttgggcggaaggatacgaataaggttgcatgcatcataaacaagtcca |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
3747612 |
aggtttactatcccttcaggacaaaatcagaatgttagtgtctctgtgatggttgggcggaaggatacaaataaggttgcatgcatcataaacaagtcca |
3747513 |
T |
|
| Q |
401 |
tgttcgattatattga |
416 |
Q |
| |
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|||||||||||||||| |
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|
| T |
3747512 |
tgttcgattatattga |
3747497 |
T |
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