View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7783_low_24 (Length: 305)

Name: NF7783_low_24
Description: NF7783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7783_low_24
NF7783_low_24
[»] chr6 (44 HSPs)
chr6 (16-153)||(5434102-5434239)
chr6 (179-287)||(5157557-5157665)
chr6 (179-287)||(5350438-5350546)
chr6 (179-286)||(5066624-5066731)
chr6 (183-287)||(5128346-5128450)
chr6 (179-286)||(5176783-5176890)
chr6 (179-286)||(5434079-5434186)
chr6 (16-158)||(5066566-5066708)
chr6 (16-150)||(5176806-5176940)
chr6 (179-287)||(5425954-5426062)
chr6 (16-167)||(5181790-5181941)
chr6 (179-286)||(5278610-5278717)
chr6 (16-150)||(5278633-5278767)
chr6 (21-158)||(5157500-5157637)
chr6 (21-153)||(5102491-5102623)
chr6 (24-167)||(5073771-5073914)
chr6 (183-262)||(5096756-5096835)
chr6 (183-262)||(5370619-5370698)
chr6 (16-152)||(5128295-5128431)
chr6 (179-286)||(5073838-5073945)
chr6 (16-167)||(5425977-5426128)
chr6 (32-150)||(5243793-5243911)
chr6 (16-150)||(5344928-5345062)
chr6 (16-153)||(5350461-5350592)
chr6 (21-158)||(5354486-5354623)
chr6 (16-152)||(5370638-5370774)
chr6 (16-150)||(5397017-5397151)
chr6 (21-150)||(5690039-5690168)
chr6 (179-287)||(5396994-5397102)
chr6 (183-266)||(5102564-5102647)
chr6 (179-285)||(5447631-5447737)
chr6 (16-165)||(5096775-5096924)
chr6 (179-286)||(5344905-5345012)
chr6 (179-286)||(5354544-5354651)
chr6 (179-286)||(5690089-5690196)
chr6 (24-94)||(5284325-5284395)
chr6 (179-280)||(5284325-5284426)
chr6 (16-153)||(5447654-5447791)
chr6 (179-286)||(5181857-5181964)
chr6 (218-287)||(5243842-5243911)
chr6 (21-136)||(5281372-5281487)
chr6 (179-286)||(5383370-5383477)
chr6 (16-97)||(5257267-5257348)
chr6 (179-287)||(5257263-5257371)
[»] chr5 (4 HSPs)
chr5 (179-287)||(8877653-8877761)
chr5 (16-153)||(8877676-8877813)
chr5 (35-148)||(20838718-20838831)
chr5 (54-110)||(15803016-15803072)
[»] chr7 (3 HSPs)
chr7 (16-152)||(36213707-36213843)
chr7 (179-286)||(36213759-36213866)
chr7 (15-97)||(18935452-18935534)
[»] chr4 (22 HSPs)
chr4 (16-160)||(4344713-4344857)
chr4 (179-286)||(4344690-4344797)
chr4 (16-158)||(4123811-4123953)
chr4 (42-160)||(4361170-4361288)
chr4 (14-103)||(4335410-4335499)
chr4 (179-286)||(4123869-4123976)
chr4 (16-147)||(4320502-4320633)
chr4 (179-286)||(4361121-4361228)
chr4 (42-153)||(6675796-6675907)
chr4 (15-153)||(6498403-6498541)
chr4 (179-286)||(4320549-4320656)
chr4 (179-286)||(4335389-4335496)
chr4 (15-146)||(6651133-6651264)
chr4 (15-82)||(6815536-6815603)
chr4 (43-153)||(6758818-6758928)
chr4 (32-97)||(7885324-7885389)
chr4 (15-115)||(6753026-6753126)
chr4 (15-153)||(6545325-6545463)
chr4 (29-115)||(6822771-6822857)
chr4 (15-76)||(4133379-4133440)
chr4 (207-268)||(6498474-6498535)
chr4 (15-115)||(6728472-6728572)
[»] scaffold0294 (1 HSPs)
scaffold0294 (179-286)||(8830-8937)
[»] scaffold0813 (1 HSPs)
scaffold0813 (15-146)||(4710-4841)
[»] chr8 (4 HSPs)
chr8 (49-150)||(3391536-3391637)
chr8 (35-149)||(3286516-3286630)
chr8 (49-107)||(3364269-3364327)
chr8 (44-76)||(3262700-3262732)
[»] chr2 (2 HSPs)
chr2 (179-284)||(22584146-22584251)
chr2 (52-119)||(14766978-14767045)
[»] scaffold0552 (1 HSPs)
scaffold0552 (15-82)||(8233-8300)


Alignment Details
Target: chr6 (Bit Score: 94; Significance: 7e-46; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 5434102 - 5434239
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| ||||||||||||||||||||  |||||||| | |||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| ||||    
T  5434102 ataacactgcaataaaaagagtgcctctttcagtactgagatcaaaaagcattggatatatctctttgtgcggttatgaaggattctcacacgatttatt 5434201  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaata 153  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  5434202 tccatttatcattcagtcttggatgtcaccaacaaata 5434239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 5157665 - 5157557
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| ||||||| |  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||    
T  5157665 atctttaaccactctgcttgcacacgacactgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatacatctctttgggcggctat 5157566  T
Q  279 gaaggattt 287  Q
    |||||||||    
T  5157565 gaaggattt 5157557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 5350438 - 5350546
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| ||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  5350438 atctttaaccactctgcttgcacataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattggatacatctctttgtgcggctat 5350537  T
Q  279 gaaggattt 287  Q
    |||||||||    
T  5350538 gaaggattt 5350546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 5066731 - 5066624
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| ||||||| | || ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||    
T  5066731 atctttaaccactctgcttgcacataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattggatacatctctttgtgcggctat 5066632  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  5066631 gaaggatt 5066624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 183 - 287
Target Start/End: Complemental strand, 5128450 - 5128346
Alignment:
Q  183 ttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaag 282  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| |||  ||||||    
T  5128450 ttaacaactctgcttgcaaataacactgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatatatctctctgtgcggccatgaag 5128351  T
Q  283 gattt 287  Q
    |||||    
T  5128350 gattt 5128346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 5176783 - 5176890
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    ||||||||| |||| ||||||||| ||||||||||||| |||||| ||||| ||| |||| ||||||||||||||||||||||||||||||| ||| |||    
T  5176783 atctttaactactctgcttgcaaataacactgcaataacaagagtgcccttgtcaatagtaaggtcaaaaagcattggatacatctctttgtgcggctat 5176882  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  5176883 gaaggatt 5176890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 5434079 - 5434186
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| ||  |||||||| |||| ||||||||||||||||| |||||||||| ||| |||    
T  5434079 atctttaaccactctgcttgcaaataacactgcaataaaaagagtgcctctttcagtactgagatcaaaaagcattggatatatctctttgtgcggttat 5434178  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  5434179 gaaggatt 5434186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 5066708 - 5066566
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| ||||||||||||||| | || |||||||||||||| ||||||||||||||||| ||||||||||| || |||||||| ||||| | |||| | ||    
T  5066708 ataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattctcgcgtgatgtgtt 5066609  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaatagtctc 158  Q
    ||||  |||||||  |||||| |||||||||||||||| ||||    
T  5066608 tccatctatcattttgtcttggatgtcaccaacaaataatctc 5066566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 5176806 - 5176940
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| |||||||||| ||||||||| || ||| ||||||| ||||||||||||||||| ||||||||||| || |||||||| ||||||| |||||||||    
T  5176806 ataacactgcaataacaagagtgcccttgtcaatagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattctcacgtgatatatt 5176905  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaa 150  Q
    ||||   ||||||  |||||| |||||||||||||    
T  5176906 tccatcaatcatttggtcttggatgtcaccaacaa 5176940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 5425954 - 5426062
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| | ||||| | || ||||||||||||||||||||||||||||| || | |||| |||||||||||||||||||||||| ||| |||    
T  5425954 atctttaaccactctgattgcacataaaactgcaataaaaagagtacccttttcagtggtaatgtcacaaagcattggatacatctctttgtgcggctat 5426053  T
Q  279 gaaggattt 287  Q
    |||||||||    
T  5426054 gaaggattt 5426062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 5181941 - 5181790
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| |||||||||| |||||||||||||||||||||||  || |||||||||| |||||| || |||||||| |||||||| |||||||||||| | ||    
T  5181941 ataacactgcaataacaagagtgccgttttcagtagtaaagtccaaaagcattgcatatatttccttgtgtggatatgaaggattctcacatgatgtgtt 5181842  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaatagtctctcttcccca 167  Q
    ||||   ||||||  |||||| |||||||| ||||||| |||| | ||||||    
T  5181841 tccagcgatcatttggtcttggatgtcaccgacaaataatctcccatcccca 5181790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 5278610 - 5278717
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    ||||||||| |||| ||||||||| ||||||||||||| |||||| ||||| ||  |||| ||||||||||||||||||||||||||||||| ||| |||    
T  5278610 atctttaactactctgcttgcaaataacactgcaataacaagagtgcccttgtctatagtaaggtcaaaaagcattggatacatctctttgtgcggctat 5278709  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  5278710 gaaggatt 5278717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 5278633 - 5278767
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| |||||||||| ||||||||| || ||  ||||||| ||||||||||||||||| ||||||||||| || |||||||| ||||||| |||||||||    
T  5278633 ataacactgcaataacaagagtgcccttgtctatagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattctcacgtgatatatt 5278732  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaa 150  Q
    ||||   ||||||  |||||| |||||||||||||    
T  5278733 tccatcaatcatttggtcttggatgtcaccaacaa 5278767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 5157637 - 5157500
Alignment:
Q  21 actgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccac 120  Q
    ||||||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||||| | || |||||||| || || | |||| | ||||||     
T  5157637 actgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatacatctctttgggcggctatgaaggattttctcgtgatgtgtttccat 5157538  T
Q  121 ttatcattcagtcttgtatgtcaccaacaaatagtctc 158  Q
     |||||||  |||||| |||||||||||||||| ||||    
T  5157537 ctatcatttggtcttggatgtcaccaacaaataatctc 5157500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 5102623 - 5102491
Alignment:
Q  21 actgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccac 120  Q
    |||||||||| || |||||| |||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||  | ||||||||| | ||||||     
T  5102623 actgcaataacaacagtgcccttttcagtagtaaggtcaaaaagcattggatatatctctctatgtggctatgaaggactttcacatgatgtgtttccat 5102524  T
Q  121 ttatcattcagtcttgtatgtcaccaacaaata 153  Q
     ||||||   |||||| ||||||||||||||||    
T  5102523 ctatcatctggtcttggatgtcaccaacaaata 5102491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 5073914 - 5073771
Alignment:
Q  24 gcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccactta 123  Q
    ||||||| ||||||||| |||||||||||||| || ||||||||||||||||| |||||||| || |||||||| ||||||| |||| | || |||   |    
T  5073914 gcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattggatatatttctttgtgcggctatgaaggattctcacgtgatgtgttcccatcga 5073815  T
Q  124 tcattcagtcttgtatgtcaccaacaaatagtctctcttcccca 167  Q
    |||||  |||||| |||||||| ||||||| |||| ||||||||    
T  5073814 tcatttggtcttggatgtcaccgacaaataatctcacttcccca 5073771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 5096756 - 5096835
Alignment:
Q  183 ttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacat 262  Q
    ||||||| || ||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5096756 ttaaccattctgcttgcaaataacactggaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatacat 5096835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 262
Target Start/End: Original strand, 5370619 - 5370698
Alignment:
Q  183 ttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacat 262  Q
    |||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  5370619 ttaaccactctgcttgcaaataacactgcaataaaaagggtacccttttcagtagtacggtcaaaaagcattggatacat 5370698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 5128431 - 5128295
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| ||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| |||| ||  ||||||| || |||  |||| | ||    
T  5128431 ataacactgcaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatatatctctctgtgcggccatgaaggattttcaagtgatgtgtt 5128332  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaat 152  Q
    ||||  ||||||   |||||| |||||||||||||||    
T  5128331 tccatctatcatctggtcttggatgtcaccaacaaat 5128295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 5073945 - 5073838
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| | | ||||| ||||| ||||||| |||||| |||||||||||||| ||||| |||||||||||||| || ||||||| ||| |||    
T  5073945 atctttaaccactctgatagcaaataacaccgcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattggatatatttctttgtgcggctat 5073846  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  5073845 gaaggatt 5073838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 5425977 - 5426128
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| ||||||||||||||||| || |||||||| ||||  ||| ||||||||||||| ||||||||||| || |||||||| || |||| |||| | ||    
T  5425977 ataaaactgcaataaaaagagtacccttttcagtggtaatgtcacaaagcattggatacatctctttgtgcggctatgaaggattttcacgtgatgtgtt 5426076  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaatagtctctcttcccca 167  Q
    ||||   ||||||  |||||| |||||||||||||||| |||| | ||||||    
T  5426077 tccagcgatcatttggtcttggatgtcaccaacaaataatctcccatcccca 5426128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 150
Target Start/End: Complemental strand, 5243911 - 5243793
Alignment:
Q  32 aagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcag 131  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||| || ||||  ||| ||||||||  ||||||   |    
T  5243911 aagagtgcccttttcagtagtaaggtcaaaaagcatcggatatatttctttgtgtggctatgaaggattttcacgcgatgtatttccatctatcatctgg 5243812  T
Q  132 tcttgtatgtcaccaacaa 150  Q
    ||||| |||||||||||||    
T  5243811 tcttggatgtcaccaacaa 5243793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 5344928 - 5345062
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| |||||||||| || ||| || |||| ||||||||| |||||||||||||||||||| ||| ||||||| |||||||| |||||||  ||| ||||    
T  5344928 ataacactgcaataacaaaagttccctttttagtagtaaggtcaaaaagcattggatatatttctctgtgtggctatgaaggattctcacgcgatgtatt 5345027  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaa 150  Q
    ||||  ||||||   |||||| |||||||||||||    
T  5345028 tccatctatcatctggtcttggatgtcaccaacaa 5345062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 5350461 - 5350592
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| ||||||||||||||| | || |||||||||||||| ||||||||||||||||| ||||||||||| || |||||||| || |||| |||| | |     
T  5350461 ataaaactgcaataaaaagaatacccttttcagtagtaaggtcaaaaagcattggatacatctctttgtgcggctatgaaggattttcacgtgatgtgt- 5350559  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaata 153  Q
         |||||||||| ||||| ||||||||||||||||    
T  5350560 -----ttatcattcattcttggatgtcaccaacaaata 5350592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 5354623 - 5354486
Alignment:
Q  21 actgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccac 120  Q
    |||||||||| |||||| || || ||| |||| || || ||||||||||||||||| ||||| ||||| |||||||| ||||||| |||| | ||||||     
T  5354623 actgcaataacaagagtacccttctcaatagttagttccaaaagcattggatatatttctttatgtggctatgaaggattctcacgtgatgtgtttccat 5354524  T
Q  121 ttatcattcagtcttgtatgtcaccaacaaatagtctc 158  Q
     |||||||  |||||| |||||||||||||||| ||||    
T  5354523 ctatcatttggtcttggatgtcaccaacaaataatctc 5354486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 5370638 - 5370774
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| |||||||||||||| || || |||||||||||| | ||||||||||||||||| || || ||||||||  ||| ||| || ||||||||| | ||    
T  5370638 ataacactgcaataaaaagggtacccttttcagtagtacggtcaaaaagcattggatacatttcattgtgtggccatgtaggattttcacatgatgtttt 5370737  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaat 152  Q
    ||||  |||||||  |||||| |||||||||||||||    
T  5370738 tccatctatcatttggtcttggatgtcaccaacaaat 5370774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 5397017 - 5397151
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| ||||||||||||||||||||||||||| |  |||| | |||||||||||||| |||||||||||| || |||||||| || |||  |||  | ||    
T  5397017 ataacactgcaataaaaagagtgccgttttcaattttaaggttaaaaagcattggatttatctctttgtgcggatatgaaggattttcatgtgaagtgtt 5397116  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaa 150  Q
    ||||  |||||||  |||||| |||||||||||||    
T  5397117 tccagctatcatttcgtcttggatgtcaccaacaa 5397151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 5690168 - 5690039
Alignment:
Q  21 actgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccac 120  Q
    |||| ||||| ||| ||||| |||||| | ||||| |||||||||||||| ||||| ||| |||| ||  ||||||| ||||||| |||||||||||||     
T  5690168 actggaataacaagtgtgcccttttcaattgtaaggtcaaaaagcattgggtatatttctctgtgcggacatgaaggattctcacgtgatatatttccat 5690069  T
Q  121 ttatcattcagtcttgtatgtcaccaacaa 150  Q
     |||||||  |||||| |||||||||||||    
T  5690068 ctatcatttggtcttggatgtcaccaacaa 5690039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 5396994 - 5397102
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    ||||||||||||   | ||||||| |||||||||||||||||||| || |||||| |  | |||| ||||||||||||||  |||||||||| |||||||    
T  5396994 atctttaaccaccttggttgcaaataacactgcaataaaaagagtgccgttttcaattttaaggttaaaaagcattggatttatctctttgtgcggatat 5397093  T
Q  279 gaaggattt 287  Q
    |||||||||    
T  5397094 gaaggattt 5397102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 266
Target Start/End: Complemental strand, 5102647 - 5102564
Alignment:
Q  183 ttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctct 266  Q
    ||||||||||  || ||||| ||||||||||||| || ||| |||||||||||||| |||||||||||||||||||| ||||||    
T  5102647 ttaaccactcttctagcaaacaacactgcaataacaacagtgcccttttcagtagtaaggtcaaaaagcattggatatatctct 5102564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 179 - 285
Target Start/End: Original strand, 5447631 - 5447737
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| ||||||||| || ||| |||||| || ||| |||||||| ||||| ||||| || ||||||||||| || ||||||| ||||| |    
T  5447631 atctttaaccactctgcttgcaaataatacttcaataacaacagtgcccttttcggtagttaggtcgaagagcattggatatatttctttgtgcggattt 5447730  T
Q  279 gaaggat 285  Q
    |||||||    
T  5447731 gaaggat 5447737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 5096775 - 5096924
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| |||| |||||||||||| || |||||||||||||| ||||||||||||||||| || ||| | |||||  ||||||| || |||| |||| | ||    
T  5096775 ataacactggaataaaaagagtacccttttcagtagtaaggtcaaaaagcattggatacatttctctatgtggccatgaaggattttcacgtgatgtgtt 5096874  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaatagtctctcttccc 165  Q
    |||   ||||||   ||||||  ||||||||||||||| |||||| ||||    
T  5096875 tccgtctatcatctggtcttggttgtcaccaacaaataatctctcatccc 5096924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 5344905 - 5345012
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    ||||||||||| || | | ||||| ||||||||||||| || ||| ||||||| |||||| |||||||||||||||||||| || ||| |||  || |||    
T  5344905 atctttaaccattctgatcgcaaataacactgcaataacaaaagttccctttttagtagtaaggtcaaaaagcattggatatatttctctgtgtggctat 5345004  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  5345005 gaaggatt 5345012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 5354651 - 5354544
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||| | |||||||||  |||||||||||| |||||||||||| ||| |||| || || |||||||||||||| || ||||| |  || |||    
T  5354651 atctttaaccaccctgcttgcaaatgacactgcaataacaagagtacccttctcaatagttagttccaaaagcattggatatatttctttatgtggctat 5354552  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  5354551 gaaggatt 5354544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 5690196 - 5690089
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| |||||||||  |||||| ||||| ||| || ||||||||| | || ||||||||||||||||| || || ||| ||| |||| ||    
T  5690196 atctttaaccactctgcttgcaaatgacactggaataacaagtgtgcccttttcaattgtaaggtcaaaaagcattgggtatatttctctgtgcggacat 5690097  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  5690096 gaaggatt 5690089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 5284395 - 5284325
Alignment:
Q  24 gcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatga 94  Q
    ||||||| ||||||||| |||||||||||||| || |||||||||||||||||  ||||||| ||||||||    
T  5284395 gcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattggatatattgctttgtgcggttatga 5284325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 280
Target Start/End: Complemental strand, 5284426 - 5284325
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| | | || || ||||| ||||||| |||||| |||||||||||||| ||||| |||||||||||||| ||  |||||| ||| |||    
T  5284426 atctttaaccactctgatagctaataacaccgcaataacaagagtgcccttttcagtagtaaggtcgaaaagcattggatatattgctttgtgcggttat 5284327  T
Q  279 ga 280  Q
    ||    
T  5284326 ga 5284325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 5447654 - 5447791
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||||||| |||||| || |||||| ||||| ||||| || || || |||||||||||||| |||||||| || | |||||| | ||| |||||| | ||    
T  5447654 ataatacttcaataacaacagtgcccttttcggtagttaggtcgaagagcattggatatatttctttgtgcggatttgaaggatcctcgcatgatgtgtt 5447753  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaata 153  Q
    ||||  ||| |||| |||||| |||||||||| |||||    
T  5447754 tccatctattattcggtcttggatgtcaccaagaaata 5447791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 5181964 - 5181857
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    ||||||||||||   | ||||||| ||||||||||||| |||||| || ||||||||||| | ||| |||||||||| ||| || || ||||  ||||||    
T  5181964 atctttaaccacattgattgcaaataacactgcaataacaagagtgccgttttcagtagtaaagtccaaaagcattgcatatatttccttgtgtggatat 5181865  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  5181864 gaaggatt 5181857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 5243911 - 5243842
Alignment:
Q  218 aagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatatgaaggattt 287  Q
    |||||| |||||||||||||| |||||||||||||| ||||| || |||||||  || ||||||||||||    
T  5243911 aagagtgcccttttcagtagtaaggtcaaaaagcatcggatatatttctttgtgtggctatgaaggattt 5243842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 5281372 - 5281487
Alignment:
Q  21 actgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccac 120  Q
    |||||||||| |||||| || ||| |||||| ||| |  |||| |||||||||||| ||||| || || ||| |||| ||||||| |||| || |||||     
T  5281372 actgcaataacaagagttccctttgcagtaggaaggttgaaaaacattggatatatttctttctgcggctataaaggattctcacgtgatgtagttccat 5281471  T
Q  121 ttatcattcagtcttg 136  Q
     |||||||| ||||||    
T  5281472 atatcattcggtcttg 5281487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 5383370 - 5383477
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    ||||||||| |||  ||||||| | ||||||||||||| |||||| ||| ||||| |  | ||||||||||| |||| ||| || ||||||| |||  ||    
T  5383370 atctttaactactttgcttgcagataacactgcaataacaagagttcccctttcaattttaaggtcaaaaagtattgtatatatttctttgtgcggccat 5383469  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  5383470 gaaggatt 5383477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 5257348 - 5257267
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagg 97  Q
    |||| |||||||||| ||||||||| || |||||  |||||||||||||||| | || | ||||||||   |||||||||||    
T  5257348 ataacactgcaataacaagagtgccattatcagttttaagatcaaaaagcatcgaatttgtctctttgcacggttatgaagg 5257267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 287
Target Start/End: Complemental strand, 5257371 - 5257263
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    ||||||||||||||   ||||||| ||||||||||||| |||||| || || |||||  | || ||||||||||| | ||   ||||||||  ||| |||    
T  5257371 atctttaaccactctaattgcaaataacactgcaataacaagagtgccattatcagttttaagatcaaaaagcatcgaatttgtctctttgcacggttat 5257272  T
Q  279 gaaggattt 287  Q
    |||||||||    
T  5257271 gaaggattt 5257263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 179 - 287
Target Start/End: Original strand, 8877653 - 8877761
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| || ||||||| ||| |||    
T  8877653 atctttaaccactctgcttgcaaataacactgcaataaaaagagtaccattttcattagtaaggtcaaaaagcattggatatatttctttgtgcggctat 8877752  T
Q  279 gaaggattt 287  Q
    |||||||||    
T  8877753 gaaggattt 8877761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 8877676 - 8877813
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| ||||||||||||||||| || |||||| ||||||| |||||||||||||||||||| |||||||| || |||||||| || || | |||| | ||    
T  8877676 ataacactgcaataaaaagagtaccattttcattagtaaggtcaaaaagcattggatatatttctttgtgcggctatgaaggattttcgcgtgatgtgtt 8877775  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaata 153  Q
    ||||  |||||||  |||||| ||||||||||||||||    
T  8877776 tccatctatcatttggtcttggatgtcaccaacaaata 8877813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 20838718 - 20838831
Alignment:
Q  35 agtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtct 134  Q
    |||||| | |||| ||| |||||||||||||||||||||||| ||  | ||||| |||||||| || ||||||||| | |||||   | |||||  ||||    
T  20838718 agtgccctattcaatagcaagatcaaaaagcattggatatatatcactatgtggatatgaaggattatcacatgatgtttttccttctctcatttggtct 20838817  T
Q  135 tgtatgtcaccaac 148  Q
    || |||||||||||    
T  20838818 tggatgtcaccaac 20838831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 15803016 - 15803072
Alignment:
Q  54 agatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgat 110  Q
    ||||||||||||||||||||||| ||| | ||||| ||| |||| || |||||||||    
T  15803016 agatcaaaaagcattggatatatatctctatgtggatataaaggattatcacatgat 15803072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 36213843 - 36213707
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| |||||||||| ||||||||| ||||||||||||||||| |||||||| |  ||||| |||||||| || |||||||| |||||||||||| | ||    
T  36213843 ataacactgcaataacaagagtgccattttcagtagtaagatctaaaagcatcgcttatatatctttgtgcggctatgaaggattctcacatgatgtgtt 36213744  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaat 152  Q
    ||||  |||||||  |||||| |||||||||||||||    
T  36213743 tccatctatcatttggtcttggatgtcaccaacaaat 36213707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 36213866 - 36213759
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    ||||||||||||   | ||||||| ||||||||||||| |||||| || ||||||||||| || || |||||||| |  || || ||||||| ||| |||    
T  36213866 atctttaaccaccttgattgcaaataacactgcaataacaagagtgccattttcagtagtaagatctaaaagcatcgcttatatatctttgtgcggctat 36213767  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  36213766 gaaggatt 36213759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 18935452 - 18935534
Alignment:
Q  15 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagg 97  Q
    ||||| |||||  ||| ||||||||| ||| ||||||||||||||||||||||||||| ||| ||  ||||||| | ||||||    
T  18935452 gataagactgctgtaacaagagtgccctttgcagtagtaagatcaaaaagcattggatttatttcactgtgtggatttgaagg 18935534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 4344713 - 4344857
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||| ||||| |||| || ||| || |||||||||||||| |||||| ||||||||| ||| ||||||||||| |||||||| ||||||| |||| | ||    
T  4344713 ataacactgctataacaaaagtacccttttcagtagtaaggtcaaaacgcattggatttatttctttgtgtggatatgaaggattctcacgtgatgtgtt 4344812  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaatagtctctc 160  Q
    |||   |||||||  |||||| ||||||||||||||| |||||||    
T  4344813 tccttctatcatttggtcttggatgtcaccaacaaatggtctctc 4344857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 4344690 - 4344797
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| | ||||||| |||||||| |||| || |||||||||||||||||| ||||||||| |||||||||  || |||||||  ||||||    
T  4344690 atctttaaccactctgattgcaaataacactgctataacaaaagtacccttttcagtagtaaggtcaaaacgcattggatttatttctttgtgtggatat 4344789  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  4344790 gaaggatt 4344797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 4123953 - 4123811
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||||||||| |||| || |||||| ||||| |||||||| |||||||||||||||| ||| ||| ||||||| |||||||| ||||| | |||| | ||    
T  4123953 ataatactgctataacaaaagtgcccttttcggtagtaaggtcaaaaagcattggatttatttctctgtgtggatatgaaggattctctcgtgatgtgtt 4123854  T
Q  116 tccacttatcattcagtcttgtatgtcaccaacaaatagtctc 158  Q
    |||   |||||||  |||||| |||| ||||||||||| ||||    
T  4123853 tccttctatcatttcgtcttggatgttaccaacaaataatctc 4123811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 4361170 - 4361288
Alignment:
Q  42 ttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtcttgtatgt 141  Q
    |||||| | |||||||||||| ||||||||| ||| ||||||||||| |||||||| ||||||| |||| | |||||   |||||||  |||||| ||||    
T  4361170 ttttcaattgtaagatcaaaacgcattggatttatttctttgtgtggatatgaaggattctcacgtgatgtgtttccttctatcatttcgtcttggatgt 4361269  T
Q  142 caccaacaaatagtctctc 160  Q
    ||||||||||| |||||||    
T  4361270 caccaacaaatggtctctc 4361288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 4335410 - 4335499
Alignment:
Q  14 agataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctc 103  Q
    |||||| ||||  |||| || |||||| |||||||||||||  |||||||||||||| ||||||||||||||||| |||||||| |||||    
T  4335410 agataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtatgaaggattctc 4335499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 4123976 - 4123869
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| | ||||||| || ||||| |||| || ||| |||||||| ||||| |||||||||||||||||||  || ||| |||  ||||||    
T  4123976 atctttaaccactctgattgcaaataatactgctataacaaaagtgcccttttcggtagtaaggtcaaaaagcattggatttatttctctgtgtggatat 4123877  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  4123876 gaaggatt 4123869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 4320633 - 4320502
Alignment:
Q  16 ataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    |||||||||  |||| || ||| || |||||| ||||||| |||||||||||||||| ||| ||| ||||||| |||||||| ||||||| |||| | ||    
T  4320633 ataatactggtataacaaaagttcccttttcattagtaaggtcaaaaagcattggatttatttctctgtgtggatatgaaggattctcacgtgatgtgtt 4320534  T
Q  116 tccacttatcattcagtcttgtatgtcaccaa 147  Q
    |||   |||||||  |||||| ||||||||||    
T  4320533 tccttctatcatttggtcttggatgtcaccaa 4320502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 4361121 - 4361228
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| | ||||||| |||||||  |||| || ||||||||||||| | || || |||||| |||||||||  || |||||||  ||||||    
T  4361121 atctttaaccactctgattgcaaataacactggtataacaaaagtacccttttcaattgtaagatcaaaacgcattggatttatttctttgtgtggatat 4361220  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  4361221 gaaggatt 4361228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 6675796 - 6675907
Alignment:
Q  42 ttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtcttgtatgt 141  Q
    |||||| ||||||||||||| ||||||||||  |||||||| ||||| | |||||| || |||| |||| |||||||   | ||||| ||||||| ||||    
T  6675796 ttttcaatagtaagatcaaagagcattggattcatctctttatgtggctttgaaggattttcacttgatgtatttccttctctcattaagtcttggatgt 6675895  T
Q  142 caccaacaaata 153  Q
    ||||| ||||||    
T  6675896 caccatcaaata 6675907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 6498541 - 6498403
Alignment:
Q  15 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 114  Q
    ||||| ||||| |||| || ||| || |||||| ||||||||||||||||||||||||| || |||||  |||| | | |||| || |||| |||| |||    
T  6498541 gataagactgctataacaaaagttcccttttcaatagtaagatcaaaaagcattggatacatttctttaggtggatttaaaggattttcacgtgatgtat 6498442  T
Q  115 ttccacttatcattcagtcttgtatgtcaccaacaaata 153  Q
    ||||   | |||||| |||||| ||||||||| ||||||    
T  6498441 ttccttctctcattcggtcttggatgtcaccatcaaata 6498403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 4320656 - 4320549
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||| | | ||||||| || ||||  |||| || ||| ||||||||| |||| |||||||||||||||||||  || ||| |||  ||||||    
T  4320656 atctttaaccaccctgattgcaaataatactggtataacaaaagttcccttttcattagtaaggtcaaaaagcattggatttatttctctgtgtggatat 4320557  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  4320556 gaaggatt 4320549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 4335389 - 4335496
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    ||||||||||||||   | ||| | |||||||  |||| || ||| |||||||||||||| | ||||||||||||||| || ||||||||||  || |||    
T  4335389 atctttaaccactctcatggcagataacactggtataacaaaagtgcccttttcagtagtaaagtcaaaaagcattggctatatctctttgtgtgggtat 4335488  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  4335489 gaaggatt 4335496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 6651133 - 6651264
Alignment:
Q  15 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 114  Q
    ||||| ||||| |||| || ||||||||||||| ||||||||| || || |||||||||||| ||| | ||||| | |||||| || ||||  ||| |||    
T  6651133 gataagactgctataacaaaagtgccgttttcaatagtaagattaagaaacattggatatatttctctatgtggctttgaaggattttcacgagatgtat 6651232  T
Q  115 ttccacttatcattcagtcttgtatgtcacca 146  Q
    ||||  || || ||| |||||| |||||||||    
T  6651233 ttccttttctcgttcggtcttggatgtcacca 6651264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 6815536 - 6815603
Alignment:
Q  15 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctcttt 82  Q
    ||||| ||||| ||||||| |||||| |||||||| |||||||  ||||||||||||||||| |||||    
T  6815536 gataagactgctataaaaaaagtgccattttcagtggtaagattgaaaagcattggatatatttcttt 6815603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 6758818 - 6758928
Alignment:
Q  43 tttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtcttgtatgtc 142  Q
    ||||| || |||||| |||||||||| ||| ||| ||| ||||||| | |||||| ||  ||| ||||||||||||  || |||||| |||| | |||||    
T  6758818 tttcaatattaagattaaaaagcattagatttatttctctgtgtggctttgaaggatttgcacgtgatatatttccttttgtcattcggtctaggatgtc 6758917  T
Q  143 accaacaaata 153  Q
    |||||||||||    
T  6758918 accaacaaata 6758928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 7885389 - 7885324
Alignment:
Q  32 aagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagg 97  Q
    ||||||||| ||| |||||||||||||||||||||||| || ||| ||| | ||||||||| ||||    
T  7885389 aagagtgccctttgcagtagtaagatcaaaaagcattgcatttatttctctatgtggttataaagg 7885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 6753026 - 6753126
Alignment:
Q  15 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 114  Q
    ||||| ||||| |||| || |||||| |||||| |||||||||  ||||||||||||||||| |||||  |||| | |||||| || |||| |||| |||    
T  6753026 gataagactgctataacaaaagtgcccttttcaatagtaagattgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatgtat 6753125  T
Q  115 t 115  Q
    |    
T  6753126 t 6753126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 153
Target Start/End: Complemental strand, 6545463 - 6545325
Alignment:
Q  15 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 114  Q
    ||||| ||||| |||| || |||||| |||||| |||| ||||  ||||||||||||||||| |||||  |||| | |||||| || |||| |||| |||    
T  6545463 gataagactgctataacaaaagtgcccttttcaatagttagattgaaaagcattggatatatttcttttcgtggctttgaaggattttcacgtgatgtat 6545364  T
Q  115 ttccacttatcattcagtcttgtatgtcaccaacaaata 153  Q
    | ||   | |||||| ||||||  |||||||| ||||||    
T  6545363 tcccttctctcattcggtcttggctgtcaccatcaaata 6545325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 6822771 - 6822857
Alignment:
Q  29 aaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatt 115  Q
    ||||| |||||| |||||| |||||||||  ||||||||||||||||| ||||| || || | |||||| || |||| |||| ||||    
T  6822771 aaaaaaagtgccattttcaatagtaagattgaaaagcattggatatatttctttatgcggctttgaaggattttcacgtgatgtatt 6822857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 4133440 - 4133379
Alignment:
Q  15 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatat 76  Q
    ||||| |||||||||| || |||||| |||||||| | ||| ||||||||||||| ||||||    
T  4133440 gataacactgcaataacaaaagtgcccttttcagtcgcaaggtcaaaaagcattgaatatat 4133379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 6498535 - 6498474
Alignment:
Q  207 actgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctcttt 268  Q
    ||||| |||| || ||| ||||||||| |||| || |||||||||||||||||||| |||||    
T  6498535 actgctataacaaaagttcccttttcaatagtaagatcaaaaagcattggatacatttcttt 6498474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 6728472 - 6728572
Alignment:
Q  15 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 114  Q
    ||||| ||||| |||| || |||||| |||||| |||||||||  ||||| ||||||||||| |||||  |||| | |||||| || |||| |||| |||    
T  6728472 gataagactgctataacaaaagtgccattttcaatagtaagattgaaaagtattggatatatttcttttcgtggctttgaaggattttcacgtgatgtat 6728571  T
Q  115 t 115  Q
    |    
T  6728572 t 6728572  T

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Target: scaffold0294 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 286
Target Start/End: Complemental strand, 8937 - 8830
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| ||||||| | ||||||||| ||| |||||| ||||||||| |||| ||||||||||| |||| ||| || ||||||| |||  ||    
T  8937 atctttaaccactctgcttgcagataacactgcattaacaagagtgcccttttcaatagtaaggtcaaaaagtattgtatatatttctttgtgcggccat 8838  T
Q  279 gaaggatt 286  Q
    ||||||||    
T  8837 gaaggatt 8830  T

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Target: scaffold0813 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0813
Description:

Target: scaffold0813; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 4841 - 4710
Alignment:
Q  15 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatat 114  Q
    ||||| ||||| |||| || ||||||||||||| ||||||||| || || |||||||||||| ||| | ||||| | |||||| || ||||  ||| |||    
T  4841 gataagactgctataacaaaagtgccgttttcaatagtaagattaagaaacattggatatatttctctatgtggctttgaaggattttcacgagatgtat 4742  T
Q  115 ttccacttatcattcagtcttgtatgtcacca 146  Q
    ||||  || || ||| |||||| |||||||||    
T  4741 ttccttttctcgttcggtcttggatgtcacca 4710  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 3391637 - 3391536
Alignment:
Q  49 tagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtcttgtatgtcaccaac 148  Q
    |||| ||||||||||||||||||||||| ||| | ||||| |||||||| || |||||| || | |||||   | |||||  |||||| |||||||||||    
T  3391637 tagtgagatcaaaaagcattggatatatatctctatgtggatatgaaggattatcacatcatgtttttccttctctcattaggtcttggatgtcaccaac 3391538  T
Q  149 aa 150  Q
    ||    
T  3391537 aa 3391536  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 3286630 - 3286516
Alignment:
Q  35 agtgccgttttcagtagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttccacttatcattcagtct 134  Q
    |||||| |||||| | |||||||||||||||||  ||||||| ||  | ||||| |||||||| || ||||||||| | |||| |  | |||||  ||||    
T  3286630 agtgcccttttcaattgtaagatcaaaaagcatcagatatatatccctatgtggatatgaaggattatcacatgatgtttttcaatctctcattaggtct 3286531  T
Q  135 tgtatgtcaccaaca 149  Q
    || ||||||||||||    
T  3286530 tggatgtcaccaaca 3286516  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 3364269 - 3364327
Alignment:
Q  49 tagtaagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacat 107  Q
    |||| ||||||||||||||||||||||| ||| | ||||| |||||||| || ||||||    
T  3364269 tagtgagatcaaaaagcattggatatatatctctatgtggatatgaaggattatcacat 3364327  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 3262732 - 3262700
Alignment:
Q  44 ttcagtagtaagatcaaaaagcattggatatat 76  Q
    |||| ||||||||||||||||||||||||||||    
T  3262732 ttcaatagtaagatcaaaaagcattggatatat 3262700  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 284
Target Start/End: Complemental strand, 22584251 - 22584146
Alignment:
Q  179 atctttaaccactcagcttgcaaagaacactgcaataaaaagagtacccttttcagtagtgaggtcaaaaagcattggatacatctctttgtccggatat 278  Q
    |||||||||||||| |||||||||  | ||||||||||||| ||| || |||||| || | ||||||||||  ||| | ||||| |||||||  || |||    
T  22584251 atctttaaccactctgcttgcaaatgaaactgcaataaaaaaagtgccattttcaatatttaggtcaaaaactatttggtacatttctttgtgtggctat 22584152  T
Q  279 gaagga 284  Q
    ||||||    
T  22584151 gaagga 22584146  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 14767045 - 14766978
Alignment:
Q  52 taagatcaaaaagcattggatatatctctttgtgtggttatgaagggttctcacatgatatatttcca 119  Q
    |||||| |||||||||||||||||| ||  | |||||||||||||| || || |||||||| ||||||    
T  14767045 taagattaaaaagcattggatatatatccctatgtggttatgaaggattatcgcatgatatttttcca 14766978  T

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Target: scaffold0552 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 8300 - 8233
Alignment:
Q  15 gataatactgcaataaaaagagtgccgttttcagtagtaagatcaaaaagcattggatatatctcttt 82  Q
    ||||| ||||| ||||||| |||||| |||||||| |||||||  |||| |||||||||||| |||||    
T  8300 gataagactgctataaaaaaagtgccattttcagtggtaagattgaaaaccattggatatatttcttt 8233  T

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