View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7783_low_34 (Length: 261)
Name: NF7783_low_34
Description: NF7783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7783_low_34 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 258
Target Start/End: Original strand, 18050390 - 18050637
Alignment:
| Q |
11 |
agatggacatcttgaagggccaacttacccttctcacgggatcgagggtcactcaagaatggtcttgtcaccctctaagatagacaattgatagtggtgg |
110 |
Q |
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| T |
18050390 |
agatggccatcctgaagggccaacttacccttctcgcgggatcgagggtcactcaagaatggtcttgtcaccctctaagatagacaattgatagttgtgg |
18050489 |
T |
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| Q |
111 |
agttactttactttgtttccatctgtgcatacattttgggctagcctaaaaattttgtgtttccctggcctcatgatttgacctttatcaagtctaccat |
210 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18050490 |
agttactttactttgtttccatctatgcatacattttgggctagcctaaaaattttgtgtttccctggcctcatgatttgacctttatcaagtctaccat |
18050589 |
T |
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| Q |
211 |
taagggggatcttgccgagggagacctgtactttgatgtccatctcat |
258 |
Q |
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|| |||||||||||| ||||||||| ||||||||||||| ||||||| |
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| T |
18050590 |
taggggggatcttgcagagggagacttgtactttgatgtagatctcat |
18050637 |
T |
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