View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7786_low_7 (Length: 390)

Name: NF7786_low_7
Description: NF7786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7786_low_7
NF7786_low_7
[»] chr1 (17 HSPs)
chr1 (17-374)||(15819020-15819374)
chr1 (90-184)||(15799788-15799884)
chr1 (17-92)||(15799922-15799997)
chr1 (294-334)||(15818942-15818982)
chr1 (136-189)||(32515376-32515429)
chr1 (130-189)||(17009511-17009570)
chr1 (130-187)||(12564428-12564485)
chr1 (130-193)||(33204323-33204385)
chr1 (136-190)||(4868480-4868534)
chr1 (130-188)||(5157155-5157213)
chr1 (147-189)||(6279481-6279523)
chr1 (130-188)||(23373242-23373300)
chr1 (143-189)||(33976525-33976571)
chr1 (145-193)||(7252564-7252612)
chr1 (130-190)||(27807196-27807256)
chr1 (146-190)||(43371836-43371880)
chr1 (130-190)||(46504147-46504207)
[»] chr5 (10 HSPs)
chr5 (220-298)||(37218268-37218346)
chr5 (220-298)||(37223984-37224062)
chr5 (205-298)||(37384866-37384959)
chr5 (210-298)||(37233274-37233362)
chr5 (130-190)||(37968958-37969018)
chr5 (137-189)||(38047815-38047867)
chr5 (143-186)||(13781817-13781860)
chr5 (130-192)||(21782585-21782647)
chr5 (136-190)||(37611150-37611204)
chr5 (136-190)||(37787880-37787934)
[»] chr8 (11 HSPs)
chr8 (136-193)||(8535990-8536047)
chr8 (130-189)||(6496820-6496879)
chr8 (133-187)||(25881347-25881401)
chr8 (129-193)||(1664447-1664511)
chr8 (130-190)||(2364389-2364449)
chr8 (136-190)||(2487943-2487997)
chr8 (143-189)||(24326113-24326159)
chr8 (136-193)||(8535718-8535775)
chr8 (129-193)||(1889063-1889127)
chr8 (136-190)||(26499797-26499851)
chr8 (136-189)||(30191076-30191129)
[»] chr7 (6 HSPs)
chr7 (143-188)||(30751602-30751647)
chr7 (130-190)||(44151405-44151465)
chr7 (131-190)||(24048621-24048680)
chr7 (143-189)||(8427095-8427141)
chr7 (136-189)||(25014031-25014084)
chr7 (132-188)||(45078361-45078417)
[»] scaffold0199 (1 HSPs)
scaffold0199 (129-193)||(6888-6952)
[»] chr3 (9 HSPs)
chr3 (130-190)||(45590732-45590792)
chr3 (143-189)||(24158458-24158504)
chr3 (130-190)||(3776319-3776379)
chr3 (130-192)||(13709765-13709827)
chr3 (143-189)||(22667485-22667531)
chr3 (143-189)||(22724124-22724170)
chr3 (143-189)||(25129960-25130006)
chr3 (141-187)||(26542621-26542667)
chr3 (130-190)||(24281128-24281188)
[»] chr6 (8 HSPs)
chr6 (138-189)||(33067240-33067291)
chr6 (143-189)||(2795343-2795389)
chr6 (138-190)||(10031813-10031865)
chr6 (151-185)||(281798-281832)
chr6 (136-190)||(27857439-27857493)
chr6 (130-196)||(30536894-30536960)
chr6 (145-186)||(10353705-10353746)
chr6 (143-188)||(32976061-32976106)
[»] chr4 (8 HSPs)
chr4 (143-190)||(18628495-18628542)
chr4 (144-190)||(22471355-22471401)
chr4 (142-177)||(22523774-22523809)
chr4 (143-190)||(25497637-25497684)
chr4 (130-193)||(46859996-46860059)
chr4 (137-189)||(6987677-6987729)
chr4 (130-182)||(15173232-15173283)
chr4 (130-190)||(33534098-33534158)
[»] chr2 (7 HSPs)
chr2 (130-189)||(9478381-9478440)
chr2 (131-189)||(5759505-5759563)
chr2 (130-185)||(14277822-14277877)
chr2 (130-189)||(22878180-22878239)
chr2 (140-192)||(13869047-13869099)
chr2 (143-187)||(16503437-16503481)
chr2 (136-188)||(19243616-19243668)
[»] scaffold0141 (1 HSPs)
scaffold0141 (136-189)||(9713-9766)
[»] scaffold0024 (1 HSPs)
scaffold0024 (132-189)||(27658-27715)


Alignment Details
Target: chr1 (Bit Score: 323; Significance: 0; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 17 - 374
Target Start/End: Complemental strand, 15819374 - 15819020
Alignment:
Q  17 acatcatttaagaaattcacggtgattaagactttgcgattccaactgaatttaccggaaaaaagaaatgtaaccaatattgtattctatataagattca 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15819374 acatcatgtaagaaattcacggtgattaagactttgcgattccaactgaatttaccg-aaaaaagaaatgtaaccaatattgtattctatataagattca 15819276  T
Q  117 cactcatttttaggacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatgacataagactagtccatttccttttgt 216  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15819275 cactcatttttaggacttgtttgaatttatctactgccataagtacttgtgtgactgtttgggagagcttatgacataagactagtccatttccttttgt 15819176  T
Q  217 actgaaatgcatacgaacatatttctcgcaagatagatgtgtaagcttttgcagttgttctttatgaattcatttctgctaacaaatgcatatttaagac 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15819175 actgaaatgcatacgaacatatttctcgcaagatagatgtgtaagcttttgcagttgttctatatgaattcatttctgctaacaaatgcatatttaagac 15819076  T
Q  317 tttgtaaatttttgcataggtgtatagtattcgagagggcaatgcgtgaggttggttt 374  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  15819075 tttgtaaatctttgcatag--gtatagtattcgagagggcaatgcgtgaggttggttt 15819020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 15799884 - 15799788
Alignment:
Q  90 ccaatattgtattctatataagattcacactcatttttaggacttgtttgaatttatctactgac--ataagtacttgtgtgactgtttgggagagc 184  Q
    |||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||  ||||||||||| | ||||||||| ||||||    
T  15799884 ccaatattgtcttctatataagattaacactcatgtttaggacttgtttgaatttatctaccgacatataagtacttgcgagactgtttgagagagc 15799788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 15799997 - 15799922
Alignment:
Q  17 acatcatttaagaaattcacggtgattaagactttgcgattccaactgaatttaccggaaaaaagaaatgtaacca 92  Q
    |||||||||||||||||||||||||| ||||| | || |||||||||||||||||| ||||||| |||||||||||    
T  15799997 acatcatttaagaaattcacggtgatcaagacatagcaattccaactgaatttaccagaaaaaataaatgtaacca 15799922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 15818982 - 15818942
Alignment:
Q  294 gctaacaaatgcatatttaagactttgtaaatttttgcata 334  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15818982 gctaacaaatgcatatttaagactttgtaaatttttgcata 15818942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 32515376 - 32515429
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||| |||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  32515376 tttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatg 32515429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 17009511 - 17009570
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||| ||||| ||||||||||||||||| | |||||  |||||||||||||||||||||    
T  17009511 gacttatttgagtttatctactgacataattccttgttggactgtttgggagagcttatg 17009570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 12564428 - 12564485
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagctta 187  Q
    ||||| |||||  |||| |||||| ||||| |||||||||||||||||||||||||||    
T  12564428 gacttatttgagcttatatactgatataagcacttgtgtgactgtttgggagagctta 12564485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 33204323 - 33204385
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatgacat 193  Q
    ||||| |||||  ||||||||||||||||||  ||||| |||||||||||||| ||||||||||    
T  33204323 gacttatttgagcttatctactgacataagtt-ttgtgagactgtttgggagaacttatgacat 33204385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 4868534 - 4868480
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    |||||||||||||| ||||||| | ||||||| ||||||||| ||||| ||||||    
T  4868534 tttgaatttatctattgacataggcacttgtgagactgtttgagagagtttatga 4868480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 5157213 - 5157155
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttat 188  Q
    ||||| |||||| |||||||| |||||||  |||||||  |||||||||||||||||||    
T  5157213 gacttatttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttat 5157155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 6279523 - 6279481
Alignment:
Q  147 ctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||    
T  6279523 ctactgacataagcacttgtgtggctgtttgagagagcttatg 6279481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 23373242 - 23373300
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttat 188  Q
    ||||| |||||| || |||||||| ||||| ||||||| || |||||||||||||||||    
T  23373242 gacttatttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttat 23373300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 33976571 - 33976525
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||| |||||||| |||||||||||||| ||||||||||| |||||    
T  33976571 ttatccactgacattagtacttgtgtgacagtttgggagagtttatg 33976525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 7252564 - 7252612
Alignment:
Q  145 atctactgacataagtacttgtgtgactgtttgggagagcttatgacat 193  Q
    ||||||| ||||||||||||| |  ||||||||||||| ||||||||||    
T  7252564 atctactaacataagtacttgagaaactgtttgggagaacttatgacat 7252612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 27807256 - 27807196
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||| |||||| || |||||||||||||| | ||||  ||||||||| ||||||||||||    
T  27807256 gacttatttgaacttttctactgacataagcatttgtaagactgtttgagagagcttatga 27807196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 43371836 - 43371880
Alignment:
Q  146 tctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||||| |||||| ||||||| ||||||||| ||||||||||||    
T  43371836 tctactggcataagcacttgtgagactgtttgagagagcttatga 43371880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 46504147 - 46504207
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||| ||||| ||||||||| | |||||||| ||||| ||||||| || |||||||||||    
T  46504147 gacttatttgagtttatctaccggcataagtatttgtgagactgttcggtagagcttatga 46504207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 37218268 - 37218346
Alignment:
Q  220 gaaatgcatacgaacatatttctcgcaagatagatgtgtaagcttttgcagttgttctttatgaattcatttctgctaa 298  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||||| | |||||||||||    
T  37218268 gaaatgcatacggacgtatttctcgcaagatagatgtgtacgcttttggagttgttctttatgaactaatttctgctaa 37218346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 37223984 - 37224062
Alignment:
Q  220 gaaatgcatacgaacatatttctcgcaagatagatgtgtaagcttttgcagttgttctttatgaattcatttctgctaa 298  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||||| | |||||||||||    
T  37223984 gaaatgcatacggacgtatttctcgcaagatagatgtgtacgcttttggagttgttctttatgaactaatttctgctaa 37224062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 205 - 298
Target Start/End: Complemental strand, 37384959 - 37384866
Alignment:
Q  205 atttccttttgtactgaaatgcatacgaacatatttctcgcaagatagatgtgtaagcttttgcagttgttctttatgaattcatttctgctaa 298  Q
    |||| ||||||| | |||||| ||| | || ||||||||||||||||||||| || ||||||| |||||||||||||||| | |||||||||||    
T  37384959 atttacttttgtgcagaaatgtatatggacgtatttctcgcaagatagatgtatatgcttttggagttgttctttatgaactaatttctgctaa 37384866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 298
Target Start/End: Original strand, 37233274 - 37233362
Alignment:
Q  210 cttttgtactgaaatgcatacgaacatatttctcgcaagatagatgtgtaagcttttgcagttgttctttatgaattcatttctgctaa 298  Q
    ||||||| | ||||||||||||  | ||||||||||||||| |||||||| ||||||| |||||||||||||||  | |||||||||||    
T  37233274 cttttgtgcagaaatgcatacgggcgtatttctcgcaagatggatgtgtatgcttttggagttgttctttatgagctaatttctgctaa 37233362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 37969018 - 37968958
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    |||||||||||  |||||||||||||||||||||||||  |||||||| |||| |||||||    
T  37969018 gacttgtttgagcttatctactgacataagtacttgtgaaactgtttgagagatcttatga 37968958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 38047815 - 38047867
Alignment:
Q  137 ttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||| |||||||||   |||||||||||||||||||||||||||||||||||    
T  38047815 ttgaacttatctactattataagtacttgtgtgactgtttgggagagcttatg 38047867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 13781817 - 13781860
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagctt 186  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||    
T  13781817 ttatctactaacataagtacttgtgagactgtttggtagagctt 13781860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 21782585 - 21782647
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatgaca 192  Q
    ||||| |||||| |||||||||| |||||  ||||||| | ||||||| ||||||||||||||    
T  21782585 gacttatttgaaattatctactggcataaacacttgtgaggctgtttgagagagcttatgaca 21782647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 37611150 - 37611204
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    |||||| |||||||||| || ||||||||||| || |||||| ||||||||||||    
T  37611150 tttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatga 37611204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 37787880 - 37787934
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    |||||| |||||||||| || ||||||||||| || |||||| ||||||||||||    
T  37787880 tttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatga 37787934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 8535990 - 8536047
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatgacat 193  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  8535990 tttgaatttatctactgacataagtacttgtgagactgtttgggagagtttatgacat 8536047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 6496820 - 6496879
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||||||||| |||||||||| ||||||  |||||||||||||||||||| ||||||||    
T  6496820 gacttgtttgagtttatctactaacataatcacttgtgtgactgtttgggaaagcttatg 6496879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 25881347 - 25881401
Alignment:
Q  133 ttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagctta 187  Q
    |||||||| |||||||||||||||||||||||||| |||||||||  ||||||||    
T  25881347 ttgtttgagtttatctactgacataagtacttgtgagactgtttgaaagagctta 25881401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 1664511 - 1664447
Alignment:
Q  129 ggacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatgacat 193  Q
    |||||| ||||| ||||||||||  |||||  ||||||| |||||||||||||||||||||||||    
T  1664511 ggacttatttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatgacat 1664447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 2364389 - 2364449
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||| |||||| |||||| |||||||||||||||||| |||||||||| |||| ||||||    
T  2364389 gacttatttgaacttatcttctgacataagtacttgtgagactgtttggaagagattatga 2364449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 2487943 - 2487997
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||| || ||||||||||||||| ||||||| |||||||||||||| |||||||    
T  2487943 tttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatga 2487997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 24326159 - 24326113
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||    
T  24326159 ttatctactggcataagcacttgtgagactgtttgggagagcttatg 24326113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 8535718 - 8535775
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatgacat 193  Q
    ||||||||||||| ||||||  |||||||||| |||| |||||||||| |||||||||    
T  8535718 tttgaatttatcttctgacacgagtacttgtgagactttttgggagagtttatgacat 8535775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 193
Target Start/End: Original strand, 1889063 - 1889127
Alignment:
Q  129 ggacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatgacat 193  Q
    |||||| ||||| ||||||||||| |||||  |||| || |||||||||||| ||||||||||||    
T  1889063 ggacttatttgagtttatctactggcataaacacttttgagactgtttgggaaagcttatgacat 1889127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 26499851 - 26499797
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    |||||||||||||||||||||||| ||||||| |||| ||| | |||| ||||||    
T  26499851 tttgaatttatctactgacataagcacttgtgagactattttgtagaggttatga 26499797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 30191076 - 30191129
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||| |||||||| || |||||| ||||||  |||||||||||||||||||||    
T  30191076 tttgagtttatctattggcataagcacttgttagactgtttgggagagcttatg 30191129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 30751647 - 30751602
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttat 188  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  30751647 ttatctactgacataagcacttgtgcgactgtttgggagagcttat 30751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 44151405 - 44151465
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||| |||||| |||| |||||||||||||||||||| || | |||| ||||||||||||    
T  44151405 gacttatttgaacttatatactgacataagtacttgtgagattatttgagagagcttatga 44151465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 24048680 - 24048621
Alignment:
Q  131 acttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    |||| ||||| |||||||||||||||||||||||    |||||||||| |||||||||||    
T  24048680 acttatttgagtttatctactgacataagtacttaaaagactgtttggaagagcttatga 24048621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 8427141 - 8427095
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||||||| ||||||||||||||| ||||||||||| |||| ||||    
T  8427141 ttatctactaacataagtacttgtgagactgtttgggggagcctatg 8427095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 25014084 - 25014031
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    |||||||||||||||||||| ||| ||||||  ||||||||| ||||| |||||    
T  25014084 tttgaatttatctactgacacaagcacttgtaagactgtttgagagagtttatg 25014031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 45078417 - 45078361
Alignment:
Q  132 cttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttat 188  Q
    ||||||||| |||||||||||| ||||| ||||||||||| |||  ||||| |||||    
T  45078417 cttgtttgagtttatctactgatataagcacttgtgtgacagttcaggagaacttat 45078361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 6952 - 6888
Alignment:
Q  129 ggacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatgacat 193  Q
    |||||| ||||| ||||||||||  |||||  ||||||| |||||||||||||||||||||||||    
T  6952 ggacttatttgagtttatctactagcataaacacttgtgagactgtttgggagagcttatgacat 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 45590792 - 45590732
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||| |||||| |||||||||  |||||| ||||||| ||||||||||||||||||||||    
T  45590792 gacttttttgaacttatctactagcataagcacttgtgagactgtttgggagagcttatga 45590732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 24158458 - 24158504
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    |||||||||||||||||||||||||  |||||||| |||||||||||    
T  24158458 ttatctactgacataagtacttgtgaaactgtttgcgagagcttatg 24158504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 3776319 - 3776379
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||||||||| ||||||||||| |||||||| ||||| || |||||| |||| |||||||    
T  3776319 gacttgtttgagtttatctactggcataagtaattgtgagaatgtttgagagaacttatga 3776379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 13709765 - 13709827
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatgaca 192  Q
    ||||| |||||||||||||||||  ||||| ||||||| |||| ||| |||||| ||||||||    
T  13709765 gacttatttgaatttatctactgggataagcacttgtgagactatttaggagagtttatgaca 13709827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 22667531 - 22667485
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||||||||||||||| ||||||| ||||||||| ||||| |||||    
T  22667531 ttatctactgacataagcacttgtgagactgtttgagagagtttatg 22667485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 22724170 - 22724124
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||||||||||||||| ||||||| ||||||||| ||||| |||||    
T  22724170 ttatctactgacataagcacttgtgagactgtttgagagagtttatg 22724124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 25130006 - 25129960
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||||||||||||| ||||||||| |||||||| | ||||||||||    
T  25130006 ttatctactgacatatgtacttgtgagactgtttagaagagcttatg 25129960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 26542667 - 26542621
Alignment:
Q  141 atttatctactgacataagtacttgtgtgactgtttgggagagctta 187  Q
    ||||||||||| ||||||||||||||  |||||||||| ||||||||    
T  26542667 atttatctactcacataagtacttgtaagactgtttggaagagctta 26542621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 24281188 - 24281128
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||| ||||| | |||||||||  ||||| |||||||||| |||||| ||||||||||||    
T  24281188 gacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatga 24281128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 33067291 - 33067240
Alignment:
Q  138 tgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    |||||||||||||||||||||| ||||||  ||||| |||||||||||||||    
T  33067291 tgaatttatctactgacataagcacttgtaagactgattgggagagcttatg 33067240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 189
Target Start/End: Complemental strand, 2795389 - 2795343
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||    
T  2795389 ttatctactgacataaatacttgtgagactgtttaggagagcttatg 2795343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 10031865 - 10031813
Alignment:
Q  138 tgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    |||||||||||||||||||||| ||||||| |||||||||  ||||| |||||    
T  10031865 tgaatttatctactgacataagcacttgtgagactgtttgaaagagcctatga 10031813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 281798 - 281832
Alignment:
Q  151 tgacataagtacttgtgtgactgtttgggagagct 185  Q
    ||||||||||||||||| |||||||||||||||||    
T  281798 tgacataagtacttgtgagactgtttgggagagct 281832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 27857493 - 27857439
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||| ||||||||||||||||   |||||||  |||||||||||||||||||||    
T  27857493 tttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatga 27857439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 30536894 - 30536960
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatgacataag 196  Q
    ||||| ||||| |||||||||| |||||||||||| |  ||||||||| |||| |||||| ||||||    
T  30536894 gacttatttgagtttatctacttacataagtacttattagactgtttgtgagaacttatgtcataag 30536960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 10353705 - 10353746
Alignment:
Q  145 atctactgacataagtacttgtgtgactgtttgggagagctt 186  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||    
T  10353705 atctactaacataagcacttgtgagactgtttgggagagctt 10353746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 32976106 - 32976061
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttat 188  Q
    |||| ||||| |||||||||||||| |||||||||| |||||||||    
T  32976106 ttatttactggcataagtacttgtgagactgtttggaagagcttat 32976061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 18628495 - 18628542
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  18628495 ttatctactgacataaacacttgtgagactgtttgggagagcttatga 18628542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 22471401 - 22471355
Alignment:
Q  144 tatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||||    
T  22471401 tatctactgacataagcacttgtgagactgtttgggagaacttatga 22471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 177
Target Start/End: Complemental strand, 22523809 - 22523774
Alignment:
Q  142 tttatctactgacataagtacttgtgtgactgtttg 177  Q
    |||||||||||||||||||||||||| |||||||||    
T  22523809 tttatctactgacataagtacttgtgagactgtttg 22523774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 25497684 - 25497637
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||||||||||||||||||||||| ||| |||||| | |||||||||    
T  25497684 ttatctactgacataagtacttgtgagacagtttggtaaagcttatga 25497637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 46860059 - 46859996
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatgacat 193  Q
    ||||| |||||| ||||||| | ||||||| |||||||  |||||||| |||||||||||||||    
T  46860059 gacttatttgaacttatctattcacataagcacttgtgaaactgtttgagagagcttatgacat 46859996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 6987677 - 6987729
Alignment:
Q  137 ttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    |||| ||||||||||  |||||||  ||||| |||||||||||||||||||||    
T  6987677 ttgagtttatctactagcataagtgtttgtgagactgtttgggagagcttatg 6987729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 15173232 - 15173283
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggaga 182  Q
    ||||| |||||| ||||||||||||||||||  ||||| ||||||||||||||    
T  15173232 gacttatttgaacttatctactgacataagt-tttgtgagactgtttgggaga 15173283  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 33534098 - 33534158
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatga 190  Q
    ||||| |||||  ||||||| ||||||||||||||||| || | |||| ||||||||||||    
T  33534098 gacttatttgagcttatctagtgacataagtacttgtgagagtatttgagagagcttatga 33534158  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 9478440 - 9478381
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||| |||||| ||||||||  ||||||||||||||||||||||||| ||||| |||||    
T  9478440 gacttatttgaacttatctaccaacataagtacttgtgtgactgtttgagagagtttatg 9478381  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 5759505 - 5759563
Alignment:
Q  131 acttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    |||| ||||| |||||||| ||  ||||||||||||| |||||||||||||||||||||    
T  5759505 acttatttgagtttatctattggtataagtacttgtgagactgtttgggagagcttatg 5759563  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 14277822 - 14277877
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagct 185  Q
    ||||| ||||| ||||||||| |||||||||||||||| || ||||||| ||||||    
T  14277822 gacttatttgagtttatctacggacataagtacttgtgagagtgtttggaagagct 14277877  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 22878239 - 22878180
Alignment:
Q  130 gacttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||| |||||  ||||| ||||||||||| ||||||| |||||||||||||| ||||||    
T  22878239 gacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatg 22878180  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 13869047 - 13869099
Alignment:
Q  140 aatttatctactgacataagtacttgtgtgactgtttgggagagcttatgaca 192  Q
    |||||||||||||||||||| |||| || |||| |||| |||| |||||||||    
T  13869047 aatttatctactgacataagcacttatgagactatttgagagaacttatgaca 13869099  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 16503481 - 16503437
Alignment:
Q  143 ttatctactgacataagtacttgtgtgactgtttgggagagctta 187  Q
    ||||||| || ||||||||||||||  ||||||||||||||||||    
T  16503481 ttatctagtggcataagtacttgtgacactgtttgggagagctta 16503437  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 19243668 - 19243616
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttat 188  Q
    |||||| ||||||||||||||||| | || || ||||||||||| ||||||||    
T  19243668 tttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 19243616  T

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Target: scaffold0141 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 9713 - 9766
Alignment:
Q  136 tttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    ||||| |||||||||| |||||| |||||||| |||||||||||||||| ||||    
T  9713 tttgagtttatctactaacataaatacttgtgagactgtttgggagagcctatg 9766  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 27715 - 27658
Alignment:
Q  132 cttgtttgaatttatctactgacataagtacttgtgtgactgtttgggagagcttatg 189  Q
    |||||||||  | ||||||||||||| |||||| || |||||||||||||||||||||    
T  27715 cttgtttgagctgatctactgacatatgtacttctgagactgtttgggagagcttatg 27658  T

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