View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7787_low_6 (Length: 273)

Name: NF7787_low_6
Description: NF7787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7787_low_6
NF7787_low_6
[»] scaffold0108 (1 HSPs)
scaffold0108 (2-273)||(50294-50565)
[»] chr3 (34 HSPs)
chr3 (2-273)||(16825348-16825619)
chr3 (2-273)||(12181133-12181404)
chr3 (5-273)||(35982970-35983238)
chr3 (29-273)||(17494436-17494679)
chr3 (8-273)||(12357602-12357867)
chr3 (5-204)||(14290604-14290803)
chr3 (2-273)||(31941692-31941963)
chr3 (11-269)||(11958259-11958517)
chr3 (8-273)||(18131422-18131687)
chr3 (2-273)||(31692254-31692525)
chr3 (2-180)||(17189256-17189434)
chr3 (2-242)||(47126764-47127004)
chr3 (2-180)||(24190186-24190364)
chr3 (42-273)||(16326816-16327049)
chr3 (46-242)||(10408788-10408984)
chr3 (2-167)||(16831597-16831762)
chr3 (5-269)||(12857568-12857832)
chr3 (46-240)||(28757141-28757335)
chr3 (2-201)||(16384441-16384640)
chr3 (2-215)||(15230450-15230663)
chr3 (2-215)||(15236318-15236531)
chr3 (115-273)||(11949107-11949265)
chr3 (2-204)||(13317638-13317840)
chr3 (33-132)||(15008684-15008783)
chr3 (35-157)||(2037014-2037136)
chr3 (35-157)||(2040755-2040877)
chr3 (35-157)||(14039651-14039773)
chr3 (5-165)||(8744462-8744622)
chr3 (5-165)||(13944921-13945081)
chr3 (71-133)||(23079166-23079228)
chr3 (2-133)||(11861272-11861403)
chr3 (2-133)||(16804027-16804158)
chr3 (2-133)||(23414870-23415001)
chr3 (71-133)||(15065990-15066052)
[»] chr4 (22 HSPs)
chr4 (2-273)||(14993208-14993479)
chr4 (2-273)||(15266936-15267207)
chr4 (2-242)||(18259632-18259872)
chr4 (2-273)||(20893191-20893462)
chr4 (5-197)||(15073595-15073787)
chr4 (2-221)||(16150848-16151067)
chr4 (2-221)||(16154994-16155213)
chr4 (46-242)||(3261679-3261875)
chr4 (46-242)||(29450422-29450618)
chr4 (46-221)||(7357479-7357654)
chr4 (55-219)||(44658760-44658924)
chr4 (2-219)||(11204073-11204290)
chr4 (8-157)||(8708953-8709102)
chr4 (17-174)||(27903644-27903801)
chr4 (33-129)||(13879413-13879509)
chr4 (5-165)||(51603636-51603796)
chr4 (5-165)||(53750314-53750474)
chr4 (1-133)||(14697401-14697533)
chr4 (2-133)||(13513650-13513781)
chr4 (71-133)||(18224123-18224185)
chr4 (2-133)||(18604400-18604531)
chr4 (71-133)||(16248326-16248388)
[»] scaffold0751 (1 HSPs)
scaffold0751 (2-268)||(5375-5640)
[»] scaffold0054 (1 HSPs)
scaffold0054 (16-273)||(63377-63634)
[»] chr7 (26 HSPs)
chr7 (2-269)||(12798332-12798596)
chr7 (4-273)||(15099433-15099702)
chr7 (2-269)||(19150165-19150432)
chr7 (2-269)||(20749564-20749831)
chr7 (2-273)||(14261074-14261345)
chr7 (11-242)||(16947309-16947540)
chr7 (5-273)||(13676601-13676869)
chr7 (11-269)||(13024498-13024756)
chr7 (2-242)||(14283202-14283442)
chr7 (19-270)||(12459781-12460032)
chr7 (46-242)||(26091670-26091866)
chr7 (46-242)||(40924689-40924885)
chr7 (2-221)||(21755614-21755833)
chr7 (2-240)||(26115418-26115656)
chr7 (2-242)||(49155482-49155722)
chr7 (2-180)||(11385257-11385435)
chr7 (2-167)||(14144917-14145082)
chr7 (46-219)||(13965540-13965713)
chr7 (2-157)||(12203628-12203783)
chr7 (42-246)||(12712531-12712735)
chr7 (71-133)||(16726360-16726422)
chr7 (71-133)||(17703374-17703436)
chr7 (5-165)||(18050784-18050944)
chr7 (2-133)||(9591653-9591784)
chr7 (1-126)||(15627820-15627945)
chr7 (91-133)||(11984281-11984323)
[»] scaffold0106 (1 HSPs)
scaffold0106 (2-273)||(34526-34797)
[»] scaffold0053 (2 HSPs)
scaffold0053 (2-273)||(62616-62887)
scaffold0053 (71-180)||(65211-65320)
[»] scaffold1433 (1 HSPs)
scaffold1433 (2-273)||(1155-1426)
[»] scaffold1032 (1 HSPs)
scaffold1032 (2-273)||(659-930)
[»] scaffold0404 (1 HSPs)
scaffold0404 (2-273)||(7933-8204)
[»] chr1 (19 HSPs)
chr1 (2-273)||(21738949-21739220)
chr1 (5-273)||(21742468-21742736)
chr1 (2-273)||(22015658-22015929)
chr1 (8-272)||(19857481-19857745)
chr1 (8-269)||(24096534-24096795)
chr1 (42-273)||(21961233-21961464)
chr1 (2-242)||(52988978-52989218)
chr1 (8-273)||(20832819-20833084)
chr1 (11-242)||(38909748-38909979)
chr1 (46-242)||(48426110-48426306)
chr1 (2-240)||(31536910-31537148)
chr1 (46-253)||(20297609-20297816)
chr1 (46-240)||(37680288-37680482)
chr1 (62-273)||(20074682-20074893)
chr1 (33-132)||(18273114-18273213)
chr1 (2-133)||(21228469-21228600)
chr1 (2-159)||(20853673-20853830)
chr1 (71-133)||(24784839-24784901)
chr1 (2-131)||(17041929-17042057)
[»] scaffold0056 (1 HSPs)
scaffold0056 (2-273)||(727-998)
[»] scaffold0266 (1 HSPs)
scaffold0266 (2-273)||(16826-17097)
[»] scaffold0156 (1 HSPs)
scaffold0156 (2-273)||(37128-37399)
[»] scaffold0523 (2 HSPs)
scaffold0523 (16-273)||(5629-5886)
scaffold0523 (58-240)||(11643-11825)
[»] scaffold0102 (1 HSPs)
scaffold0102 (2-273)||(42887-43158)
[»] chr5 (21 HSPs)
chr5 (2-273)||(23563191-23563462)
chr5 (11-269)||(23077937-23078195)
chr5 (2-240)||(20345389-20345627)
chr5 (2-221)||(22505805-22506024)
chr5 (46-240)||(14884058-14884252)
chr5 (2-139)||(21870301-21870438)
chr5 (2-139)||(21874581-21874718)
chr5 (46-221)||(25851198-25851373)
chr5 (5-165)||(17266360-17266520)
chr5 (33-157)||(23669822-23669946)
chr5 (35-157)||(16258092-16258214)
chr5 (35-157)||(22591811-22591933)
chr5 (35-157)||(22595366-22595488)
chr5 (38-130)||(21561084-21561176)
chr5 (17-130)||(21983215-21983328)
chr5 (33-273)||(43122541-43122781)
chr5 (71-133)||(18782346-18782408)
chr5 (38-159)||(22465138-22465259)
chr5 (71-133)||(23461203-23461265)
chr5 (71-133)||(23526283-23526345)
chr5 (71-132)||(20803830-20803891)
[»] scaffold0011 (1 HSPs)
scaffold0011 (2-255)||(153699-153952)
[»] chr6 (22 HSPs)
chr6 (8-273)||(19456047-19456312)
chr6 (8-273)||(19466192-19466457)
chr6 (2-219)||(21474678-21474895)
chr6 (2-273)||(14376902-14377173)
chr6 (2-273)||(18797714-18797985)
chr6 (2-273)||(19438026-19438297)
chr6 (8-258)||(24515406-24515656)
chr6 (5-219)||(25770922-25771136)
chr6 (19-270)||(10465851-10466102)
chr6 (2-180)||(21566977-21567155)
chr6 (46-240)||(24367457-24367651)
chr6 (2-157)||(19486280-19486435)
chr6 (35-157)||(16813780-16813902)
chr6 (38-157)||(8720727-8720846)
chr6 (89-273)||(34642659-34642843)
chr6 (2-174)||(15462459-15462631)
chr6 (45-127)||(25958782-25958864)
chr6 (2-159)||(20010487-20010645)
chr6 (71-133)||(21764976-21765038)
chr6 (42-133)||(30678050-30678141)
chr6 (91-133)||(27559044-27559086)
chr6 (44-133)||(23081587-23081676)
[»] scaffold2062 (1 HSPs)
scaffold2062 (2-242)||(716-956)
[»] scaffold0335 (1 HSPs)
scaffold0335 (5-273)||(4151-4419)
[»] scaffold0046 (1 HSPs)
scaffold0046 (5-273)||(70297-70565)
[»] scaffold0067 (4 HSPs)
scaffold0067 (2-273)||(29813-30084)
scaffold0067 (5-201)||(64449-64645)
scaffold0067 (5-201)||(49027-49223)
scaffold0067 (5-201)||(58061-58257)
[»] scaffold0146 (1 HSPs)
scaffold0146 (2-273)||(128-399)
[»] scaffold0035 (1 HSPs)
scaffold0035 (2-273)||(5994-6264)
[»] scaffold0034 (4 HSPs)
scaffold0034 (8-273)||(1802-2067)
scaffold0034 (8-247)||(11756-11995)
scaffold0034 (17-159)||(70675-70817)
scaffold0034 (2-123)||(122020-122141)
[»] chr8 (17 HSPs)
chr8 (14-269)||(31413828-31414083)
chr8 (5-273)||(22027567-22027835)
chr8 (2-216)||(19985463-19985677)
chr8 (5-201)||(21928726-21928922)
chr8 (5-216)||(22374152-22374363)
chr8 (46-242)||(28984168-28984364)
chr8 (11-269)||(29300719-29300977)
chr8 (2-242)||(22054120-22054360)
chr8 (46-219)||(16268552-16268725)
chr8 (33-273)||(6606784-6607024)
chr8 (2-269)||(20391316-20391583)
chr8 (71-133)||(30310497-30310559)
chr8 (2-133)||(22043193-22043324)
chr8 (2-133)||(32603511-32603642)
chr8 (2-133)||(15536749-15536880)
chr8 (71-133)||(21391214-21391276)
chr8 (71-133)||(21780540-21780602)
[»] scaffold0010 (2 HSPs)
scaffold0010 (8-273)||(39183-39448)
scaffold0010 (2-133)||(14753-14884)
[»] scaffold0017 (1 HSPs)
scaffold0017 (2-201)||(4297-4496)
[»] scaffold0104 (1 HSPs)
scaffold0104 (7-216)||(43268-43477)
[»] chr2 (17 HSPs)
chr2 (2-273)||(23274384-23274655)
chr2 (11-273)||(19716407-19716669)
chr2 (11-273)||(19720970-19721232)
chr2 (2-180)||(23097399-23097577)
chr2 (60-242)||(20848411-20848592)
chr2 (2-269)||(28350670-28350937)
chr2 (2-215)||(21901386-21901599)
chr2 (5-165)||(12577252-12577412)
chr2 (71-133)||(22462931-22462993)
chr2 (2-133)||(23116440-23116571)
chr2 (72-133)||(23205245-23205306)
chr2 (72-133)||(23676849-23676910)
chr2 (2-133)||(24817221-24817352)
chr2 (71-133)||(11351161-11351223)
chr2 (91-133)||(24657128-24657170)
chr2 (71-133)||(24704932-24704994)
chr2 (42-126)||(19647827-19647911)
[»] scaffold0420 (1 HSPs)
scaffold0420 (2-273)||(8803-9074)
[»] scaffold0317 (1 HSPs)
scaffold0317 (5-273)||(2820-3088)
[»] scaffold0664 (1 HSPs)
scaffold0664 (2-201)||(7299-7498)
[»] scaffold0310 (1 HSPs)
scaffold0310 (2-269)||(11170-11437)
[»] scaffold0434 (1 HSPs)
scaffold0434 (2-144)||(5746-5888)
[»] scaffold0367 (1 HSPs)
scaffold0367 (8-273)||(8871-9136)
[»] scaffold0167 (1 HSPs)
scaffold0167 (8-273)||(5242-5507)
[»] scaffold1056 (1 HSPs)
scaffold1056 (18-202)||(1980-2164)
[»] scaffold0222 (2 HSPs)
scaffold0222 (5-273)||(21003-21271)
scaffold0222 (2-273)||(331-602)
[»] scaffold0026 (1 HSPs)
scaffold0026 (7-271)||(51842-52106)
[»] scaffold0020 (2 HSPs)
scaffold0020 (2-273)||(98427-98698)
scaffold0020 (5-216)||(176233-176444)
[»] scaffold1517 (1 HSPs)
scaffold1517 (2-270)||(1331-1599)
[»] scaffold0309 (1 HSPs)
scaffold0309 (110-273)||(12916-13079)
[»] scaffold0151 (1 HSPs)
scaffold0151 (2-185)||(386-569)
[»] scaffold0708 (1 HSPs)
scaffold0708 (11-269)||(4998-5256)
[»] scaffold0031 (1 HSPs)
scaffold0031 (2-152)||(115934-116084)
[»] scaffold0023 (2 HSPs)
scaffold0023 (11-273)||(164254-164516)
scaffold0023 (71-133)||(30487-30549)
[»] scaffold0004 (3 HSPs)
scaffold0004 (2-198)||(319507-319703)
scaffold0004 (17-273)||(325896-326151)
scaffold0004 (38-157)||(200357-200476)
[»] scaffold0243 (1 HSPs)
scaffold0243 (42-273)||(9656-9887)
[»] scaffold0706 (1 HSPs)
scaffold0706 (8-273)||(5059-5324)
[»] scaffold0118 (1 HSPs)
scaffold0118 (2-221)||(702-921)
[»] scaffold0865 (1 HSPs)
scaffold0865 (5-219)||(1119-1333)
[»] scaffold0133 (1 HSPs)
scaffold0133 (5-219)||(28132-28346)
[»] scaffold1426 (1 HSPs)
scaffold1426 (2-242)||(1451-1691)
[»] scaffold0041 (1 HSPs)
scaffold0041 (46-242)||(41955-42151)
[»] scaffold0261 (2 HSPs)
scaffold0261 (2-252)||(12258-12506)
scaffold0261 (2-252)||(20438-20686)
[»] scaffold0009 (2 HSPs)
scaffold0009 (42-261)||(251820-252039)
scaffold0009 (71-133)||(229765-229827)
[»] scaffold0192 (1 HSPs)
scaffold0192 (5-219)||(29770-29984)
[»] scaffold1530 (1 HSPs)
scaffold1530 (8-168)||(798-958)
[»] scaffold0235 (2 HSPs)
scaffold0235 (2-273)||(8306-8577)
scaffold0235 (2-273)||(18520-18791)
[»] scaffold0190 (1 HSPs)
scaffold0190 (42-269)||(30210-30437)
[»] scaffold0005 (1 HSPs)
scaffold0005 (2-167)||(263521-263686)
[»] scaffold0072 (1 HSPs)
scaffold0072 (1-242)||(54267-54508)
[»] scaffold0276 (1 HSPs)
scaffold0276 (46-242)||(23811-24007)
[»] scaffold0001 (1 HSPs)
scaffold0001 (42-242)||(514237-514437)
[»] scaffold2165 (1 HSPs)
scaffold2165 (42-221)||(687-866)
[»] scaffold0058 (1 HSPs)
scaffold0058 (11-273)||(22311-22573)
[»] scaffold0003 (2 HSPs)
scaffold0003 (2-167)||(203676-203841)
scaffold0003 (73-133)||(424637-424697)
[»] scaffold0203 (1 HSPs)
scaffold0203 (68-273)||(764-969)
[»] scaffold0405 (1 HSPs)
scaffold0405 (5-213)||(5851-6059)
[»] scaffold0765 (1 HSPs)
scaffold0765 (2-216)||(6101-6315)
[»] scaffold0076 (1 HSPs)
scaffold0076 (11-201)||(53276-53466)
[»] scaffold0476 (1 HSPs)
scaffold0476 (2-180)||(389-567)
[»] scaffold0074 (1 HSPs)
scaffold0074 (2-242)||(15292-15532)
[»] scaffold0490 (1 HSPs)
scaffold0490 (2-105)||(3222-3325)
[»] scaffold1299 (1 HSPs)
scaffold1299 (2-180)||(1692-1870)
[»] scaffold0068 (1 HSPs)
scaffold0068 (42-240)||(66992-67190)
[»] scaffold0239 (1 HSPs)
scaffold0239 (2-166)||(9631-9795)
[»] scaffold0348 (2 HSPs)
scaffold0348 (5-273)||(4696-4964)
scaffold0348 (5-273)||(17331-17599)
[»] scaffold1845 (1 HSPs)
scaffold1845 (2-159)||(1148-1305)
[»] scaffold0114 (1 HSPs)
scaffold0114 (5-166)||(40354-40515)
[»] scaffold0165 (2 HSPs)
scaffold0165 (121-271)||(12151-12301)
scaffold0165 (6-84)||(12322-12400)
[»] scaffold0188 (1 HSPs)
scaffold0188 (11-123)||(33225-33337)
[»] scaffold0088 (1 HSPs)
scaffold0088 (86-273)||(30123-30310)
[»] scaffold0443 (1 HSPs)
scaffold0443 (86-221)||(12038-12173)
[»] scaffold0609 (2 HSPs)
scaffold0609 (33-157)||(1244-1368)
scaffold0609 (33-108)||(7911-7986)
[»] scaffold0029 (1 HSPs)
scaffold0029 (42-273)||(115751-115982)
[»] scaffold0585 (2 HSPs)
scaffold0585 (68-149)||(3999-4080)
scaffold0585 (5-73)||(707-775)
[»] scaffold0180 (1 HSPs)
scaffold0180 (40-156)||(30895-31011)
[»] scaffold0130 (2 HSPs)
scaffold0130 (2-129)||(3736-3863)
scaffold0130 (83-133)||(7704-7754)
[»] scaffold0161 (1 HSPs)
scaffold0161 (45-129)||(36161-36245)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-133)||(16452-16584)
[»] scaffold1881 (1 HSPs)
scaffold1881 (71-133)||(393-455)
[»] scaffold0605 (1 HSPs)
scaffold0605 (21-159)||(1583-1721)
[»] scaffold0550 (1 HSPs)
scaffold0550 (71-133)||(10071-10133)
[»] scaffold0546 (1 HSPs)
scaffold0546 (71-133)||(208-270)
[»] scaffold0109 (1 HSPs)
scaffold0109 (71-133)||(13037-13099)
[»] scaffold0044 (1 HSPs)
scaffold0044 (71-133)||(17489-17551)
[»] scaffold2059 (1 HSPs)
scaffold2059 (2-133)||(613-744)
[»] scaffold0289 (1 HSPs)
scaffold0289 (2-133)||(117-248)
[»] scaffold0018 (1 HSPs)
scaffold0018 (2-133)||(9195-9326)
[»] scaffold0518 (1 HSPs)
scaffold0518 (5-95)||(2198-2288)
[»] scaffold0282 (1 HSPs)
scaffold0282 (11-133)||(13327-13449)
[»] scaffold0177 (2 HSPs)
scaffold0177 (71-133)||(11269-11331)
scaffold0177 (71-133)||(14954-15016)
[»] scaffold0080 (2 HSPs)
scaffold0080 (71-133)||(10152-10214)
scaffold0080 (71-133)||(12807-12869)
[»] scaffold0509 (1 HSPs)
scaffold0509 (76-128)||(12162-12214)
[»] scaffold0270 (2 HSPs)
scaffold0270 (1-133)||(7202-7334)
scaffold0270 (1-133)||(14332-14464)
[»] scaffold0819 (1 HSPs)
scaffold0819 (72-131)||(445-504)
[»] scaffold0079 (1 HSPs)
scaffold0079 (2-133)||(36827-36958)
[»] scaffold0008 (2 HSPs)
scaffold0008 (2-133)||(139454-139585)
scaffold0008 (95-133)||(179-217)
[»] scaffold0451 (1 HSPs)
scaffold0451 (71-133)||(13945-14007)
[»] scaffold0285 (1 HSPs)
scaffold0285 (71-133)||(5327-5389)
[»] scaffold0273 (1 HSPs)
scaffold0273 (71-133)||(369-431)
[»] scaffold0019 (1 HSPs)
scaffold0019 (91-133)||(171447-171489)
[»] scaffold0139 (1 HSPs)
scaffold0139 (212-273)||(19023-19084)
[»] scaffold0357 (1 HSPs)
scaffold0357 (101-133)||(17920-17952)
[»] scaffold0207 (1 HSPs)
scaffold0207 (101-133)||(4498-4530)


Alignment Details
Target: scaffold0108 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 50565 - 50294
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||||||||||||||||| |||| |||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50565 aagccgtatagtgcccctgctgacaagggtaagcatagatggaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 50466  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||||    
T  50465 gtggtgaaaaagaccacaagagtaatgtttgtgaccgagatgagaagaagtgtttcaggtgtggtcagaaaggacacaccttagctgattgtaagcgtgg 50366  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| |||||||||||||||| ||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  50365 ggatattgtttgctacaactgcaatgaggaaggtcatatcagttcgtagtgtacccagcctaagaaggttag 50294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 16825348 - 16825619
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||||||| || |||| |||||| |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  16825348 aagccgtatagtgcccctcctgacaagggtaagtagagattgaaagatgagaggaggcccaagatgagagatgctcctactgatattgtttgtttcaagt 16825447  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||| |||||||||||||||    
T  16825448 gtggtgaaaaaggccacaagagtaatgtttgtgaccgtgatgagaagaagtgcttcaggtgtggtaaaaaaggacacactttagctgattgtaagcgtgg 16825547  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||||||||||||||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||    
T  16825548 ggacattgtttgctacaacttcaatgaggaaggtcatatcagtttgcagtgtacgcagcctaagaaggttag 16825619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 12181404 - 12181133
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| |||||| |||| || |||||||||| |||| ||||||||||||||||||||||||| ||| |||| |||||||    
T  12181404 aagccgtatagtgctcctgctgacaagggtaagtagaggttaaatgatgagaggaggaccaagaggagagatgctcctactgacattttttgcttcaagt 12181305  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||||||||||||||||||||| || |||||  |||||||||||||||||||||| ||||||||||||||||||||  ||| ||||||||||| |||    
T  12181304 gtggtgaaaaaggccacaagagtaaagtctgtgatagagatgagaagaagtgcttcagttgtggtcggaaaggacacacactagctgattgtaagcttgg 12181205  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||||||||||| || || | |||| ||||||||||||||| ||||||||||||||| || |||||||||||    
T  12181204 ggacattgtttgttataattgcaacaaggaaggtcatatcagttcgtagtgtacgcaaccgaagaaggttag 12181133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 35983238 - 35982970
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||||| |||| ||||| |||||  |||||||||||| |||||| ||||||||||||||||||||||  ||| |||| ||||||||||    
T  35983238 ccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgtgattatttgcttcaagtgtg 35983139  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| | |||||||||||| || | |||||| |||||||||||    
T  35983138 gtgagaaaggccacaagagtaatgtgtgtgaccgagatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtgggga 35983039  T
Q  205 cattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||||||||||||||||  || |||||||| ||||| | |||| | |||||||||||||||||||||||    
T  35983038 tattgtttgctacaactgtaatgaggaaggacatattagttcgcattgtacgcagcctaagaaggttag 35982970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 29 - 273
Target Start/End: Complemental strand, 17494679 - 17494436
Alignment:
Q  29 ggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatg 128  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  17494679 ggtaagcagaggttaaatgatgagaggaggcccaagaggagagatgctcatactgagattgtttgcttcaaatgtggtgaaaaaggccacaagagtaatg 17494580  T
Q  129 tttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacga 228  Q
    |||||||  ||||||||||||||||| |||||||||||| ||||||||||||  ||| ||| |||||| |||| |||||||||||||| |||| ||||||    
T  17494579 tttgtgatagagatgagaagaagtgc-tcaggtgtggtcagaaaggacacacactagctgactgtaagtgtggagacattgtttgctataactgcaacga 17494481  T
Q  229 ggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||||||||||| | |||| ||||||| || || |||||||||||    
T  17494480 ggaaggtcatattagttcgcagtgtactcaaccgaagaaggttag 17494436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 12357602 - 12357867
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || ||| ||||  |||||||||||| ||||||||||||||||||| ||||| |||| |||||||| | ||||||||| |    
T  12357602 tatagtgctcctgctgacaagggaaagtagaggctgaatgatgagaggaggcccaagaggagagatactcctgctgagattgtttgctacaagtgtggcg 12357701  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    |||||||||||||||||||||| |||||   ||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| || ||| |    
T  12357702 aaaaaggccacaagagtaatgtctgtgataaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcggggagacgt 12357801  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||||||| |||| ||| |||||||||||||||| |||| ||||||| || || |||||||||||    
T  12357802 tgtttgctataactgcaatgaggaaggtcatatcagttcgcagtgtacacaaccgaagaaggttag 12357867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 14290604 - 14290803
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||||| |||| ||||| |||||  |||||||||||| |||||| ||||||||||||||||||||||| ||| |||| ||||||||||    
T  14290604 ccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtg 14290703  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    |||| |||||||||||||||||||| |||||  ||||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||    
T  14290704 gtgagaaaggccacaagagtaatgtgtgtgattgagatgagaagaagtgctttaggtgtggacagaaaggacacactttagctgattgtaagcgtgggga 14290803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 31941963 - 31941692
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| || |||||||  ||||||||||||| ||||||||| |||||| |||||||| |||| || ||||||| |||||    
T  31941963 aagccgtatagtgctcctgctgacaaagggaagcagaagttgaatgatgagaggaggcccaataggagaaatgctcctgctgagatcgtttgttacaagt 31941864  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || ||||||||||||||||||||||||  |  ||||||||||||||| ||||||||||||| ||| ||||||||| ||| ||| || ||||||||    
T  31941863 gtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgactgcaagcgtgg 31941764  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||  ||||||| || || | ||| ||||| || ||||||| ||| |||||||||||||| |||||||||||    
T  31941763 tgatgttgtttgttataattgcaatgaggagggccatatcagttcatagtgtacgcagccgaagaaggttag 31941692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 269
Target Start/End: Original strand, 11958259 - 11958517
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    ||||| |||||| |||| || || |||||| |||||||||| | |||||  |||||||||||||||||| |||| ||||||||||  |||||||||||||    
T  11958259 agtgctcctgctgacaaagggaaacagagaatgaatgatgataggaggcttaagaggagagatgctcctgctgaaattgtttgttataagtgtggtgaaa 11958358  T
Q  111 aaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgt 210  Q
    |||||||||| || |||| |||||   ||||||||| |||||| ||||||||||||| ||||||||| ||  ||| ||| |||||||||| |||||||||    
T  11958359 aaggccacaaaagcaatgcttgtggtagagatgagaggaagtgtttcaggtgtggtcagaaaggacatacactagctgaatgtaagcgtgaggacattgt 11958458  T
Q  211 ttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
     |||||||||| |||||| ||| ||||||||| ||| |||||||| ||||| |||||||    
T  11958459 ctgctacaactgcaacgaagaaagtcatatcagttcatagtgtactcagccgaagaagg 11958517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 18131422 - 18131687
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || || |||||| ||||| |||||| |||||||||||||||||||||||||  ||| |||| ||| | ||||||||| |    
T  18131422 tatagtgctcctgctgacaaaggaaaacagagactgaataatgagaggaggcccaagaggagagatgctcctgttgagattgattgctacaagtgtggcg 18131521  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    | ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||| | |||| | ||||||||||||||||  |    
T  18131522 agaaaggccacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggtcagaaaggacacgcattagctaattgtaagcgtggggatgt 18131621  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     || ||||| |||| ||| |||||| ||||||| | |||| ||||||| || |  |||||||||||    
T  18131622 agtgtgctataactgcaatgaggaaagtcatattagttcgcagtgtactcaactgaagaaggttag 18131687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 31692254 - 31692525
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| || |||||||  ||||||||||||| ||||||||| |||||| ||||| || |||| || ||||||| |||||    
T  31692254 aagccgtatagtgctcctgctgacaaagggaagcagaagttgaatgatgagaggaggcccaataggagaaatgcttctgctgagatcgtttgttacaagt 31692353  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| ||||||||||||||||||||||||  |  ||||||||||||||| ||||||||||||  ||| ||||||||| ||| ||| || ||| ||||    
T  31692354 gtggtgagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgtttcaggtgtggttagaagggacacactctagctgactgcaagagtgg 31692453  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||  ||||||| || |||| ||| ||||| || ||||||| |||  ||||||||||||| |||||||||||    
T  31692454 tgatgttgtttgttataactgcaatgaggagggccatatcagttcacagtgtacgcagccgaagaaggttag 31692525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 17189434 - 17189256
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| ||||| ||||||||||| || ||||||||||| |||||||||| |||| ||||||||||||||||||||  ||||||||||||||| ||||    
T  17189434 aagccgtacagtgctcctgctaacaagggaaagcagagatttaatgatgagaggaggtccaagaggagagatgctcctgttgatattgtttgttttaagt 17189335  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacac 180  Q
    |||| || ||||||||||| ||||| ||||||  |  ||||||||||||||||||||||||||||| ||||||||||||    
T  17189334 gtggcgagaaaggccacaaaagtaacgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacac 17189256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 47127004 - 47126764
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || ||||||||  ||  |||||| | |||||||||||||||||||||||||  ||| |||||||| | |||||    
T  47127004 aagccttacagtgctcctgctgacaaaggaaagcagaggatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagt 47126905  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||||||||||||||||||||||||   ||||||| | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||    
T  47126904 gtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 47126805  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    ||||||||| || ||||||| ||| | ||||||||||||||    
T  47126804 ggacattgtctgttacaactgcaatggggaaggtcatatca 47126764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 24190364 - 24190186
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| ||||| |||||| |||| || |||||||||||||||||||||| ||||  |||||||||||||||||||  ||||||||||||||| ||||    
T  24190364 aagccgtacagtgctcctgctgacaagggaaagcagagattgaatgatgagaggaggtacaagaggagagatgctcctgttgatattgtttgttttaagt 24190265  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacac 180  Q
    |||| || ||||||||||| ||||| ||||||  |  ||||||||||||||||||||||||||||| ||||||||||||    
T  24190264 gtggcgagaaaggccacaaaagtaacgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacac 24190186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 16326816 - 16327049
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagaga-tgctcctactgata-ttgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccga 139  Q
    |||||||||| | ||| |||||||||||||| ||||||| |||| | |||||||||  |||||||||||||||||||||||||| ||||||||||   ||    
T  16326816 tgaatgatgataggagacccaagaggagagactgctcctgctgagacttgtttgttataagtgtggtgaaaaaggccacaagagcaatgtttgtggtaga 16326915  T
Q  140 gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcata 239  Q
    ||||||| ||| || ||||||||||||| ||| ||||||| ||||| ||| |||||||||||||||||||| |||||||||| ||| |  || |||||||    
T  16326916 gatgagaggaaatgtttcaggtgtggtcagaagggacacaatttagctgaatgtaagcgtggggacattgtctgctacaactgcaatggagagggtcata 16327015  T
Q  240 tcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| |||| |||||||  |||| |||||||||||    
T  16327016 tcagttcgcagtgtactaagccgaagaaggttag 16327049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 242
Target Start/End: Complemental strand, 10408984 - 10408788
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | ||||||||||||||||||||||||  |||| |||||||||| ||| |||||||| |||||||||||||||||||||||||   |||||||     
T  10408984 tgatgataggaggcccaagaggagagatgctccagctgagattgtttgttacaaatgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 10408885  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||||| ||| | ||||||||||||||    
T  10408884 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatca 10408788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 16831597 - 16831762
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||||||||||||||||| | || |||||||||||| | |||||||||| |||||| || ||||||||||||||| |||| || |||||||| ||||    
T  16831597 aagccgtatagtgcccctgctgataagggtaagcagagacttaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttttaagt 16831696  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtc 167  Q
    |||| || |||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  16831697 gtggcgagaaaggccacaagagtaatgtttgt-accaaggatgagaagaagtgcttcaggtgtggtc 16831762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 5 - 269
Target Start/End: Original strand, 12857568 - 12857832
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||||| |||| ||||| ||  || |||||||||||| |||||| || |||||||||||||||||||| ||||| |||||||||||||    
T  12857568 ccgtatagtgctcctgctgacaaaggtaaacaaggactgaatgatgagaggaggcctaaaaggagagatgctcctactgagattgtctgtttcaagtgtg 12857667  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    ||||||| ||||||| ||||||||| |||||| | |||||||||||||| ||| | |||||   |||||||||||   ||| ||| || |||||| | ||    
T  12857668 gtgaaaagggccacatgagtaatgtatgtgactgtgatgagaagaagtgtttccgatgtggaaagaaaggacacataatagctgagtgcaagcgtcgtga 12857767  T
Q  205 cattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
     |||||||||||||| |   | || ||||||||||| |  |||||||| | | ||||||||||||    
T  12857768 tattgtttgctacaattgtgatgaagaaggtcatattagctcgtagtgcaggaagcctaagaagg 12857832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 46 - 240
Target Start/End: Complemental strand, 28757335 - 28757141
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | |||||||||||||||||||||||||  ||| |||||||| | |||||||||||| |||||||||||||||||||||||||   |||||||     
T  28757335 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 28757236  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatat 240  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||| | ||| |  |||||||||||    
T  28757235 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaattgcaatggagaaggtcatat 28757141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 16384441 - 16384640
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || |||||||||||| |||| |||||||||||| | |||||||||| |||||| || ||||||||||||||| |||| || |||||||| ||||    
T  16384441 aagccatacagtgcccctgctgacaagggtaagcagagacttaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttttaagt 16384540  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtg 200  Q
    |||| || |||| |||||||||||| |||||| ||| | |||||||||||||||||||||||||||| ||| || ||||  || | |||||| |||||||    
T  16384541 gtggcgagaaagtccacaagagtaacgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacatgttggctgattgcaagcgtg 16384639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 15230663 - 15230450
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||||| |||| || ||||| ||||| |||||||||| |||||| ||||| | ||||| |||| |||| |||||||| | |||||    
T  15230663 aagccctatagtgctcctgctgacaaagggaagcaaagattaaatgatgagaggaggcctaagagaaaagatgttcctgctgagattgtttgctacaagt 15230564  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||| ||||||||||||||||||||| |  | |||||||| ||||| ||| | |||||   |||||| || ||  ||| ||| || ||||||||    
T  15230563 gtggtgaaaagggccacaagagtaatgtttgtaatggtgatgagaaaaagtgtttctgatgtgggaagaaagggcatacgatagctgaatgcaagcgtgg 15230464  T
Q  202 ggacattgtttgct 215  Q
     || ||||||||||    
T  15230463 tgatattgtttgct 15230450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 15236531 - 15236318
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||||| |||| || ||||| ||||| |||||||||| |||||| ||||| | ||||| |||| |||| |||||||| | |||||    
T  15236531 aagccctatagtgctcctgctgacaaagggaagcaaagattaaatgatgagaggaggcctaagagaaaagatgttcctgctgagattgtttgctacaagt 15236432  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||| ||||||||||||||||||||| |  | |||||||| ||||| ||| | |||||   |||||| || ||  ||| ||| || ||||||||    
T  15236431 gtggtgaaaagggccacaagagtaatgtttgtaatggtgatgagaaaaagtgtttctgatgtgggaagaaagggcatacgatagctgaatgcaagcgtgg 15236332  T
Q  202 ggacattgtttgct 215  Q
     || ||||||||||    
T  15236331 tgatattgtttgct 15236318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 115 - 273
Target Start/End: Original strand, 11949107 - 11949265
Alignment:
Q  115 ccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgc 214  Q
    |||||||||||||||||||     ||||||||||||||||||||| ||||||| |||||||||||  |||| |||||||||||| || ||  ||||||||    
T  11949107 ccacaagagtaatgtttgtactaaagatgagaagaagtgcttcagatgtggtcagaaaggacacatattagctgattgtaagcggggagatgttgtttgc 11949206  T
Q  215 tacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    || |||| ||| ||||||||||| |||| || | |||||||| || | |||||||||||    
T  11949207 tataactgcaatgaggaaggtcacatcagtttgcagtgtacgtagacgaagaaggttag 11949265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 13317638 - 13317840
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || || || | ||| |||||||||| |||||| | | ||||||||||||||  |||| ||||||||| |||||    
T  13317638 aagccctacagtgctcctgctgacaaaggaaaacaaatattaaatgatgagaggaggcctagggggagagatgctcctgttgatgttgtttgttacaagt 13317737  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||| |||||||||||| |||||||||||   |  ||||||||||||||| ||||| |||||||  ||||| ||   |||||  ||||| ||||||||    
T  13317738 gtggtgcaaaaggccacaaaagtaatgtttgcaccaaagatgagaagaagtgtttcagatgtggtcaaaaaggtcatgttttagcggattgcaagcgtgg 13317837  T
Q  202 gga 204  Q
    |||    
T  13317838 gga 13317840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 132
Target Start/End: Original strand, 15008684 - 15008783
Alignment:
Q  33 agcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttg 132  Q
    |||| |||||||||||||||| ||| || ||||||||||||| |||| |||| |||||||| | |||||||||||| | |||||||||||||||||||||    
T  15008684 agcaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgagattgtttgctacaagtgtggtgagagaggccacaagagtaatgtttg 15008783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 2037014 - 2037136
Alignment:
Q  35 cagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtg 134  Q
    |||||||||| |||||||| ||| || ||||||||||||| |||| |||| |||||||| | |||||||||||| || ||||||||||||||||||||      
T  2037014 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 2037113  T
Q  135 accgagatgagaagaagtgcttc 157  Q
    |  | || |||||||||||||||    
T  2037114 atggtgaggagaagaagtgcttc 2037136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 2040755 - 2040877
Alignment:
Q  35 cagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtg 134  Q
    |||||||||| |||||||| ||| || ||||||||||||| |||| |||| |||||||| | |||||||||||| || ||||||||||||||||||||      
T  2040755 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 2040854  T
Q  135 accgagatgagaagaagtgcttc 157  Q
    |  | || |||||||||||||||    
T  2040855 atggtgaggagaagaagtgcttc 2040877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 14039773 - 14039651
Alignment:
Q  35 cagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtg 134  Q
    |||||||||| |||||||| ||| || ||||||||||||| |||| |||| |||||||| | |||||||||||| || ||||||||||||||||||||      
T  14039773 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 14039674  T
Q  135 accgagatgagaagaagtgcttc 157  Q
    |  | || |||||||||||||||    
T  14039673 atggtgaggagaagaagtgcttc 14039651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 8744462 - 8744622
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||||||  || | || |||||||||||| | |||||||||| |||||| |  | ||| ||||||||| |||| || || || || |||||||    
T  8744462 ccgtatagtgccccgactgataagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtg 8744561  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtgg 165  Q
    | || ||||| ||||||||||| |||||| ||| | |||||||||||||| ||||| |||||    
T  8744562 gcgagaaaggtcacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 8744622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 13945081 - 13944921
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||||||  || | || |||||||||||| | |||||||||| |||||| |  | ||| ||||||||| |||| || || || || |||||||    
T  13945081 ccgtatagtgccccgactgataagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtg 13944982  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtgg 165  Q
    | || ||||| ||||||||||| |||||| ||| | |||||||||||||| ||||| |||||    
T  13944981 gcgagaaaggtcacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 13944921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 23079166 - 23079228
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| |||  ||||||||||| || |||||||| |||||||||||||| |||||||||    
T  23079166 gatgctcctgctgtgattgtttgttttaattgtggtgagaaaggccacaagagcaatgtttgt 23079228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 11861403 - 11861272
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || || |||||| ||   ||||| | | |||| |||| ||  ||||||||| | || ||||| | |||||| |    
T  11861403 aagccctatagtgcccctgctgataaaggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctatttcaatt 11861304  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||| |||||||||||||| |||||||||    
T  11861303 gtggtgagaaaggccacaagagcaatgtttgt 11861272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 16804027 - 16804158
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || || |||||| ||   ||||| | | |||| |||| ||  ||||||||  |||| |||  ||||||||| |    
T  16804027 aagccctatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctccagctgagattacttgtttcaatt 16804126  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||| |||||||||||||| |||||||||    
T  16804127 gtggtgagaaaggccacaagagcaatgtttgt 16804158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 23414870 - 23415001
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || || |||||| ||   ||||| | | |||| |||| ||  ||||||||| | || ||||| |||||||| |    
T  23414870 aagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtctgtttcaact 23414969  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
     ||| || ||||||||||||||||||||||||    
T  23414970 atggcgagaaaggccacaagagtaatgtttgt 23415001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 15066052 - 15065990
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| |||  ||||| ||||| || |||||||| |||||||||||||| |||||||||    
T  15066052 gatgctcctgctgcgattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 15065990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 14993208 - 14993479
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14993208 aagccgtatagtgcccctgctgacaagggtaagcagagattgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 14993307  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||||||||||||||| |||||| |||| |||    
T  14993308 gtggtgaaaaaggccacaagagtaatgtttgtgaccgtgagaagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgcaagcatgg 14993407  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||  ||||||||||||||| ||| |||||||||||||||| |||| |||||||||| ||||||||||||||    
T  14993408 ggatgttgtttgctacaactgcaatgaggaaggtcatatcagttcgcagtgtacgcaacctaagaaggttag 14993479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 15267207 - 15266936
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| ||||||||||| || |||||||||| |||||||||||||||||||||||||||  |||||||||| |||||||    
T  15267207 aagccgtatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaagaggagagatgctcctacgaatattgtttgcttcaagt 15267108  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||| ||| || ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||| |||    
T  15267107 gtgatgagaagggccataagagtaatgtttgtgacagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgtaagcatgg 15267008  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     |||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||||| |||||||||||    
T  15267007 agacattgtttgctataactgcaacgaagaaggtcatatcagttcgtagtgtacgcagccgaagaaggttag 15266936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 18259872 - 18259632
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| ||||||||||| || |||||||||| |||||||||||||| ||||||||||||| |||||||||| || ||||    
T  18259872 aagccgtatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaagaggacagatgctcctactaatattgtttgctttaagt 18259773  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  18259772 gtggtgaaaaaggccacaagagtaatgtttgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgtaagcgtgg 18259673  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    ||||||||||||||| |||| ||| ||||||||||||||||    
T  18259672 ggacattgtttgctataactgcaatgaggaaggtcatatca 18259632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 20893462 - 20893191
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || |||||||   |||||||||| | |||||| |||||||||||||||||| |||| |||||||||| |||||    
T  20893462 aagccttaaagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagt 20893363  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||||| ||||||| ||||||||||   ||||||||| |||||||||||||||||||| ||| ||||||| ||||| ||| || ||||||||    
T  20893362 gtggtgaaaaaggcaacaagagcaatgtttgtggtagagatgagaggaagtgcttcaggtgtggtcagaagggacacaatttagctgaatgcaagcgtgg 20893263  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| ||||| | |||||||| ||| || || || ||||||| |||| |||||||  |||| |||||||||||    
T  20893262 ggatattgtctactacaactgcaatgaagaggggcatatcagttcgcagtgtactgagccgaagaaggttag 20893191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 5 - 197
Target Start/End: Complemental strand, 15073787 - 15073595
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||||| |||| | ||| |||||| |||||||||||| |||||| | ||||||||||||||||||||| ||||| |||||||||||||    
T  15073787 ccgtatagtgctcctgctgacaaagttaaacagagactgaatgatgagaggaggcctaggaggagagatgctcctactgagattgtctgtttcaagtgtg 15073688  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagc 197  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||   |||||||||||| |||| |||||| ||||    
T  15073687 gtgaaaaaggccacaagagtaatgtatgtgaccgtgatgagaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagc 15073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 16151067 - 16150848
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| ||| || |||| || |||||||  ||||||||||||| |||||||||||||||||||||||||  |||||||||||| |  ||||    
T  16151067 aagccgtatagtgctcctactgacaaaggaaagcagaagttgaatgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgctataagt 16150968  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || ||||||||||||||||||||||||     ||||||||||||||||||||||||||||| ||||||||||||  ||| |||||| ||||||||    
T  16150967 gtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacactagctgattgcaagcgtgg 16150868  T
Q  202 ggacattgtttgctacaact 221  Q
     ||  |||||||||| ||||    
T  16150867 tgatgttgtttgctataact 16150848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 16155213 - 16154994
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| ||| || |||| || |||||||  ||||||||||||| |||||||||||||||||||||||||  |||||||||||| |  ||||    
T  16155213 aagccgtatagtgctcctactgacaaaggaaagcagaagttgaatgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgctataagt 16155114  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || ||||||||||||||||||||||||     ||||||||||||||||||||||||||||| ||||||||||||  ||| |||||| ||||||||    
T  16155113 gtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacactagctgattgcaagcgtgg 16155014  T
Q  202 ggacattgtttgctacaact 221  Q
     ||  |||||||||| ||||    
T  16155013 tgatgttgtttgctataact 16154994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 242
Target Start/End: Original strand, 3261679 - 3261875
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | |||||||||||||||||||||||||  ||| |||||||| | |||||||||||| |||||||||||||||||||||||||   |||||||     
T  3261679 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 3261778  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||||| ||| | ||||||||||||||    
T  3261779 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatca 3261875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 46 - 242
Target Start/End: Original strand, 29450422 - 29450618
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | |||||| ||||||||||||||||||  ||| |||||||| | |||||||||||| |||||||||||||||||||||||||   |||||||     
T  29450422 tgatgataggaggcctaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaggagatgat 29450521  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | |||||| ||||||||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||||| ||| | ||||||||| ||||    
T  29450522 aggaagtgtttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcacatca 29450618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 46 - 221
Target Start/End: Complemental strand, 7357654 - 7357479
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | ||||||||||||||||||||||||| |||| |||||||||| |||| ||||||| |||||||||||||| ||||||| ||    |||||||    
T  7357654 tgatgataggaggcccaagaggagagatgctcctgctgagattgtttgttacaagagtggtgagaaaggccacaagagcaatgtttatggtaaagatgag 7357555  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaact 221  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || |||||||| |||||||| ||||||||||    
T  7357554 aggaagtgcttcaggtgtggtcagaagggtcacaatttagctgaatgcaagcgtggagacattgtctgctacaact 7357479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 219
Target Start/End: Original strand, 44658760 - 44658924
Alignment:
Q  55 gaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgc 154  Q
    |||||||||||||||||||||||||  ||| |||||||| | |||||||||||| |||||||||||||||||||||||||   ||||||| | |||||||    
T  44658760 gaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgc 44658859  T
Q  155 ttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaa 219  Q
    ||||||||||||| ||| || |||| ||||| ||| || ||||||||||| ||||| || |||||    
T  44658860 ttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggatattgtctgttacaa 44658924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 11204073 - 11204290
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||||| |||| || ||| |||   |||||||||| | ||| ||||||||||||||||||||| |||| ||||||||||  ||||    
T  11204073 aagccttatagtgctcctgctgacaaaggaaagtagaagatgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttataagt 11204172  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||||||||||||| ||||||||||   ||||||| |  || |||||||||||||||| ||| || |||| | ||| | | || ||||||||    
T  11204173 gtggtgagaaaggccacaagagcaatgtttgtggtagagatgatagaaaatgcttcaggtgtggtcagaagggtcacagtctagcttaatgcaagcgtgg 11204272  T
Q  202 ggacattgtttgctacaa 219  Q
    ||| ||||| ||||||||    
T  11204273 ggatattgtctgctacaa 11204290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 8709102 - 8708953
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || ||||| |||||||||||||||| ||| || ||||| | ||||| |||| |||| |||||||| | |||||||||||    
T  8709102 tatagtgctcctgctgacaaagggaagcaaagattgaatgatgagaggagacctaagagaatagatgttcctgctgagattgtttgctacaagtgtggtg 8709003  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttc 157  Q
    | || ||||||||||||||||||||  |  | ||||| ||||||||||||    
T  8709002 agaagggccacaagagtaatgtttgcaatggtgatgaaaagaagtgcttc 8708953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 27903801 - 27903644
Alignment:
Q  17 cctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggcc 116  Q
    |||||| |||| || || || |||||||||||||||| | |||| | | ||||||||||||||  |||| ||||||||| |||||||||||  |||||||    
T  27903801 cctgctgacaaaggaaaacaaagattgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggcc 27903702  T
Q  117 acaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaagg 174  Q
    ||||||||||||| ||   |  ||||||||||||||| ||||| ||||||| ||||||    
T  27903701 acaagagtaatgtctgcaccaaagatgagaagaagtgtttcagatgtggtcagaaagg 27903644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 129
Target Start/End: Complemental strand, 13879509 - 13879413
Alignment:
Q  33 agcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgt 129  Q
    |||| |||||||||||||||| ||| || ||||| ||||||| | ||||||| |||||||||| |||||||||||| || |||||||||||||||||    
T  13879509 agcaaagattgaatgatgagaggagacctaagagaagagatgtttctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgt 13879413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 51603636 - 51603796
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||||||  || | || |||||||||||| | |||||||||| |||||| |  | ||| ||||||||| |||| || || || || |||||||    
T  51603636 ccgtatagtgccccgactgataagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtg 51603735  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtgg 165  Q
    | || ||||| ||||||||||| |||||| ||| | |||||||||||||| ||||| |||||    
T  51603736 gcgagaaaggtcacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 51603796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 53750314 - 53750474
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||||||  || | || |||||||||||| | |||||||||| |||||| |  | ||| ||||||||| |||| || || || || |||||||    
T  53750314 ccgtatagtgccccgactgataagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtg 53750413  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtgg 165  Q
    | || ||||| ||||||||||| |||||| ||| | |||||||||||||| ||||| |||||    
T  53750414 gcgagaaaggtcacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 53750474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 14697533 - 14697401
Alignment:
Q  1 aaagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaag 100  Q
    |||||| || ||||| |||||| | || |||||||| |||||||||||||||| |||||| |  | || ||||||| || |||| |||||||| |  |      
T  14697533 aaagccttacagtgctcctgctgataagggtaagcaaagattgaatgatgagaggaggcctagaaagaaagatgctactgctgagattgtttgctatact 14697434  T
Q  101 tgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||| |||||||| |||||||||| ||||    
T  14697433 tgtggtgagaaaggccataagagtaatgcttgt 14697401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 13513781 - 13513650
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||| | | || || ||||||||| ||  |||||| | | |||| |||| ||  ||||||||| | || ||||| |||||||| |    
T  13513781 aagccttatagtgcccctgttgataagggcaagcagagaatggttgatgataggcggcctaagaagaaggatgctcctgcagagattgtctgtttcaact 13513682  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||| || |||||||||||||| |||||||||    
T  13513681 gtggcgagaaaggccacaagagcaatgtttgt 13513650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 18224123 - 18224185
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | || |||||||||||||| ||||| || |||||||||||| |||||||||||    
T  18224123 gatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagtgtaatgtttgt 18224185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 18604400 - 18604531
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||| |||||||||| | || || ||||||||| ||   ||||| | | |||| |||| ||  ||||||||| | || ||| ||||||| || |    
T  18604400 aagccttataatgcccctgctgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctccttcggagattatttgttttaact 18604499  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||| || ||||||||||||||||||||||||    
T  18604500 gtggcgagaaaggccacaagagtaatgtttgt 18604531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 16248326 - 16248388
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||| ||||| |||   |||||||| | |||||| ||||||||||||||||||||||||    
T  16248326 gatgctccaactgagattacatgtttcaattatggtgagaaaggccacaagagtaatgtttgt 16248388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 2 - 268
Target Start/End: Complemental strand, 5640 - 5375
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| ||||||||| || |||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  5640 aagccgtacagtgcccctactgacaagggtaagcagagattgaatgatgagaggaggcc-aagaggagagatgctcctactgatattgtttgtttcaagt 5542  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  5541 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgtaagcgtgg 5442  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaag 268  Q
    |||  |||||||||||||||  || || ||||||||||||| |||| ||||||||||||||||||||    
T  5441 ggatgttgtttgctacaactgtaatgaagaaggtcatatcagttcgcagtgtacgcagcctaagaag 5375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 16 - 273
Target Start/End: Original strand, 63377 - 63634
Alignment:
Q  16 ccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggc 115  Q
    ||||||| |||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  63377 ccctgctgacaagggtaagcaaagattgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgataaaggc 63476  T
Q  116 cacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgct 215  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  63477 cacaagagtaatgtttgtgaccgagatgagaagaagtgtttcaggtgtggtcagaaaggacacactttagctgattgtaagcatggggatattgtttgct 63576  T
Q  216 acaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||||  || |||||||||||||||| |||| |||||||||||||||||||||||||    
T  63577 acaactataatgaggaaggtcatatcagttcgcagtgtacgcagcctaagaaggttag 63634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 2 - 269
Target Start/End: Original strand, 12798332 - 12798596
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  12798332 aagccgtatagtgctcctgctgacaagggtaagcagagattgaatgatgagaggaggctcaagaggagagatgctcatactgatattgtttgtttcaagt 12798431  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  12798432 gtgg---aaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgtgagcgtgg 12798528  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
    |||  |||||||||||||||  || || ||||||||||||| |||| ||||||| |||||||||||||    
T  12798529 ggatgttgtttgctacaactgtaatgaagaaggtcatatcagttcgcagtgtacacagcctaagaagg 12798596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 4 - 273
Target Start/End: Original strand, 15099433 - 15099702
Alignment:
Q  4 gccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgt 103  Q
    |||||||||||| |||||| |||| ||||||||||| || ||||||| || |||||||||||||||||||||||||||||| || ||||| |||||||||    
T  15099433 gccgtatagtgctcctgctgacaagggtaagcagaggttaaatgatgggaggaggcccaagaggagagatgctcctactgacatagtttgcttcaagtgt 15099532  T
Q  104 ggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggg 203  Q
    ||||| ||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||| ||||||||| ||| |||||||||||||||||    
T  15099533 ggtgagaaaggccacaagagtaacgtttgtgatagagatgagaagaagtgcttcaggtgtggtcagaagggacacactctagatgattgtaagcgtgggg 15099632  T
Q  204 acattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||| ||||| || |||| ||| |||||||||||||||| |||| ||||||||||||| |||||||||||    
T  15099633 acatcgtttgttataactgcaatgaggaaggtcatatcagttcgcagtgtacgcagccgaagaaggttag 15099702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 269
Target Start/End: Complemental strand, 19150432 - 19150165
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||| ||||||||||||| |||| ||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||    
T  19150432 aagccgtttagtgcccctgctgacaagggtaagcagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttgcttcaagt 19150333  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| ||||||||||| |||||||| ||||| |||||| ||||||||||||| |||||||||| |||||||||||| || | |||||| ||||||||    
T  19150332 gtggtgagaaaggccacaacagtaatgtgtgtgatcgagatcagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtgg 19150233  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
     || ||||||||||||||||  || || ||||| ||||| | |||| |||||||||| ||||||||||    
T  19150232 agatattgtttgctacaactgtaatgaagaaggacatattagttcgcagtgtacgcaacctaagaagg 19150165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 269
Target Start/End: Complemental strand, 20749831 - 20749564
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||| ||||||||||||| |||| ||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||    
T  20749831 aagccgtttagtgcccctgctgacaagggtaagcagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttgcttcaagt 20749732  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| ||||||||||| |||||||| ||||| |||||| ||||||||||||| |||||||||| |||||||||||| || | |||||| ||||||||    
T  20749731 gtggtgagaaaggccacaacagtaatgtgtgtgatcgagatcagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtgg 20749632  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
     || ||||||||||||||||  || || ||||| ||||| | |||| |||||||||| ||||||||||    
T  20749631 agatattgtttgctacaactgtaatgaagaaggacatattagttcgcagtgtacgcaacctaagaagg 20749564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 14261074 - 14261345
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||||||||||||||||| |||| |||||| ||||| |||||||||||| |||||| ||| ||||| ||||||||||||| ||| |||| |||||||    
T  14261074 aagccgtatagtgcccctgctgacaagggtaagtagagactgaatgatgagaggaggcctaaggggagatatgctcctactgagattatttgcttcaagt 14261173  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| ||||||||||||||||||||  || | |||||||||||||||| ||| |||||| ||| |||||||||||| || | |||||| ||||||||    
T  14261174 gtggtgagaaaggccacaagagtaatgtgcgtcatcgagatgagaagaagtactttaggtgtagtcagaaaggacacacattggctgattgcaagcgtgg 14261273  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| ||||||||||||||||  || |||||||| ||||| | |||| ||| || ||||||||||||||||||    
T  14261274 ggatattgtttgctacaactgtaatgaggaaggacatattagttcgcagtttatgcagcctaagaaggttag 14261345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 16947309 - 16947540
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    |||||||||||| |||| || ||||||||| ||||||||||||  |||||||||||||||||||||||   ||| |||||||||| ||||||||||||||    
T  16947309 agtgcccctgctgacaagggaaagcagagaatgaatgatgagagaaggcccaagaggagagatgctccagttgaaattgtttgttacaagtgtggtgaaa 16947408  T
Q  111 aaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgt 210  Q
    |||||||||||||||||| |||||   ||||||||| ||||||  | |||||||||| ||||||||||||  ||| ||| ||||||||||| ||||||||    
T  16947409 aaggccacaagagtaatgcttgtggtagagatgagaggaagtgtgttaggtgtggtcagaaaggacacacactagctgaatgtaagcgtggagacattgt 16947508  T
Q  211 ttgctacaacttcaacgaggaaggtcatatca 242  Q
    ||||||||||| |||||| || ||||||||||    
T  16947509 ttgctacaactgcaacgaagagggtcatatca 16947540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 13676869 - 13676601
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||||| |||| || || ||||| ||||||||||||| |||||||||||||||||||||||||  ||| |||||||| | ||||||||    
T  13676869 ccgtatagtgctcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtg 13676770  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    || | ||||||||||||||||||||||||||   |||||||||||||| |||||||||||| | ||| |||||||| |||| |||||||||||| || ||    
T  13676769 gtaagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtacttcaggtgtggacagaagggacacacattagctgattgtaagcggggaga 13676670  T
Q  205 cattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| |||||||| |||| ||| ||||| || ||||||| |||  ||||| | || || |||||||||||    
T  13676669 catagtttgctataactgcaatgaggagggccatatcagttcacagtgtgcacaaccgaagaaggttag 13676601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 269
Target Start/End: Complemental strand, 13024756 - 13024498
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    ||||| |||||| |||| || ||||||||  |||||||||| | ||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  13024756 agtgctcctgctgacaaagggaagcagaggatgaatgatgataggaggcccaagaggagagatgctcctgctgaaattgtttgttacaagtgtggtgaaa 13024657  T
Q  111 aaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgt 210  Q
    |||||||||| || |||| || ||   || |||||| ||| || ||||||||||||  ||||||||||||  ||| ||| ||||||||||| ||||||||    
T  13024656 aaggccacaaaagcaatgcttatggtagatatgagaggaaatgtttcaggtgtggttagaaaggacacaccctagctgaatgtaagcgtggagacattgt 13024557  T
Q  211 ttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
     |||||||||| |||||| ||||||||||||| |||  ||||||| ||||| |||||||    
T  13024556 ctgctacaactgcaacgaagaaggtcatatcagttctcagtgtactcagccgaagaagg 13024498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 14283202 - 14283442
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||||||||||||||||| | || |||||||||||| | |||||||||| |||||||   ||||||||||||||| ||||  ||||||||| |||||    
T  14283202 aagccgtatagtgcccctgctgataagggtaagcagagactcaatgatgagaggaggcccgttaggagagatgctcctgctgaggttgtttgttacaagt 14283301  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtg 200  Q
    |||| || |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||| ||| || ||||| |||| |||||| |||||||    
T  14283302 gtggcgagaaaggccacaagagtaatgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacacattagctgattgcaagcgtg 14283400  T
Q  201 gggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | ||  |||| || || |||| |||||| || ||||||||||    
T  14283401 gtgatgttgtatgttataactgcaacgaagagggtcatatca 14283442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 12460032 - 12459781
Alignment:
Q  19 tgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccac 118  Q
    |||| |||| || ||||||| | |||||||||| | |||||||||||||||||||| |||| |||| ||||| |||| ||||||||||||||||||||||    
T  12460032 tgctgacaagggaaagcagaaaatgaatgatgataggaggcccaagaggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccac 12459933  T
Q  119 aagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctaca 218  Q
    ||||| |||| |||||   ||||||||| ||| || || |||||||||| ||| ||||||||  ||| ||| |||||||||||||||||||| ||||| |    
T  12459932 aagagcaatgcttgtggtagagatgagaggaaatgttttaggtgtggtcagaagggacacaccctagctgaatgtaagcgtggggacattgtctgctata 12459833  T
Q  219 acttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggt 270  Q
    ||| ||| || ||||||||||| | |||  ||||||| ||||| ||||||||    
T  12459832 actgcaatgaagaaggtcatattagttcacagtgtactcagccgaagaaggt 12459781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 242
Target Start/End: Original strand, 26091670 - 26091866
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | |||||||||||||||||||||||||  ||| |||||||| | |||||||||||| |||||||||||||||||||||||||   |||||||     
T  26091670 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 26091769  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||||| ||| | ||||||||||||||    
T  26091770 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatca 26091866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 242
Target Start/End: Original strand, 40924689 - 40924885
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | |||||||||||||||||||||||||  ||| |||||||| | |||||||||||| |||||||||||||||||||||||||   |||||||     
T  40924689 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 40924788  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||||| ||| | ||||||||||||||    
T  40924789 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatca 40924885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 21755833 - 21755614
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || |||||||   ||| |||||| | |||||| |||||||||||||||||  |||| |||||||||| |||||    
T  21755833 aagccttacagtgctcctgctgacaaaggaaagcagaatatgagtgatgacatgaggcctaagaggagagatgctccctctgagattgtttgttacaagt 21755734  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||||||||||||| ||||||||||    |||||||| |||||| ||||||||||||| ||| || |||||||||| ||| |||||||||||    
T  21755733 gtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgtttcaggtgtggtcagaagggtcacactttagctgaatgtaagcgtgg 21755634  T
Q  202 ggacattgtttgctacaact 221  Q
    ||| ||||| ||||||||||    
T  21755633 ggatattgtctgctacaact 21755614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 240
Target Start/End: Original strand, 26115418 - 26115656
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || |||||||   ||| |||||| | ||||||||||||||||||||||||  |||| |||||||||| |||||    
T  26115418 aagccttacagtgctcctgctgacaaaggaaagcagaagatgagtgatgataggaggcccaagaggagagatgctccggctgagattgtttgttacaagt 26115517  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||||||||||||||||||||||||   ||||||| | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||    
T  26115518 gtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 26115617  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatat 240  Q
    ||||||||| || ||||| | ||| |  |||||||||||    
T  26115618 ggacattgtctgttacaattgcaatggagaaggtcatat 26115656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 49155722 - 49155482
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || ||||||||  ||  ||| || | |||||||||||||||||||||||||  ||| |||||||| | |||||    
T  49155722 aagccttacagtgctcctgctgacaaaggaaagcagaggatgggtgaggataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagt 49155623  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||||||||||||||||||||||||   ||||||| | |||||||||||||||||||| ||| || || | ||||| ||| || ||||||||    
T  49155622 gtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcatagtttagctgaatgcaagcgtgg 49155523  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    ||||||||| || ||||||| ||| | ||||||||||||||    
T  49155522 ggacattgtctgttacaactgcaatggggaaggtcatatca 49155482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 11385257 - 11385435
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| |||||||||||| |||| || |||||  || ||||||||||||  |||||||||||||||||||||||| |||| || ||||| |  ||||    
T  11385257 aagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagagaaggcccaagaggagagatgctcctgctgagatagtttgctataagt 11385356  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacac 180  Q
    |||| || ||||||||||| ||||||||||||  |  ||||||||||||||||||||||||||||| ||||||||||||    
T  11385357 gtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacac 11385435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 14145082 - 14144917
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| |||||||||||| |||| |||||||||||| | |||||||||| ||||||  | ||||||||||||||| |||| || |||||||| ||||    
T  14145082 aagccgtacagtgcccctgctgacaagggtaagcagagacttaatgatgagaggaggccatataggagagatgctcctgctgagatagtttgttttaagt 14144983  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtc 167  Q
     ||| || ||||||||||||||||| |||||| ||| | || |||||||||||||||||||||||||    
T  14144982 atggcgagaaaggccacaagagtaacgtttgt-accaaggaggagaagaagtgcttcaggtgtggtc 14144917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 13965540 - 13965713
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | ||||||||||||||||||||||||| |||| |||| ||| | |||||||||||| |||| ||||||||||||||||||||    ||||||     
T  13965540 tgatgataggaggcccaagaggagagatgctcctgctgagattgattgctacaagtgtggtgagaaagaccacaagagtaatgtttgtggtaaagatgat 13965639  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaa 219  Q
    |  || |||||||||||||||| ||| || |||| | ||| ||| || ||||||||||| ||||| ||||||||    
T  13965640 agaaaatgcttcaggtgtggtcagaagggtcacagtctagctgaatgcaagcgtggggatattgtctgctacaa 13965713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 12203628 - 12203783
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || || || |||||||||||||||| ||| || ||||||||||||| |||| |||  |||||||| | |||||    
T  12203628 aagccctacagtgctcctgctgacaaagggaaacaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgtgattgtttgctacaagt 12203727  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttc 157  Q
    ||||||| || ||||||||||||||||||||| |  | |||||||| |||||||||    
T  12203728 gtggtgagaagggccacaagagtaatgtttgtaatggtgatgagaaaaagtgcttc 12203783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 246
Target Start/End: Original strand, 12712531 - 12712735
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgaga 141  Q
    ||||||||||||  || |||||| | |||||  |||||  ||| || ||||| || |||||||| || ||||||||||| ||||||||||||  |  |||    
T  12712531 tgaatgatgagagaagacccaagggaagagacactcctgttgagatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaaga 12712630  T
Q  142 tgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatc 241  Q
    |||||||||||||||||||||||| | ||| || |||   |||| |||||| || ||||| || ||||| ||||| |||| ||| | ||| |||||||||    
T  12712631 tgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgcaaacgtggtgatattgtatgctataactgcaatggggagggtcatatc 12712730  T
Q  242 aattc 246  Q
    |||||    
T  12712731 aattc 12712735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 16726360 - 16726422
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | ||||||||||||||||| ||||| |  ||||||||||||||||||||||||    
T  16726360 gatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 16726422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 17703374 - 17703436
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | ||||||||||||||||| ||||| |  ||||||||||||||||||||||||    
T  17703374 gatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 17703436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 18050784 - 18050944
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| ||  || | || |||||||||||| | |||||||||| |||||| |  | ||| ||||||||| |||| || || || || |||||||    
T  18050784 ccgtatagtgctccgactgataagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtg 18050883  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtgg 165  Q
    | || ||||| ||||||||||| |||||| ||| | |||||||||||||| ||||| |||||    
T  18050884 gcgagaaaggtcacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 18050944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 9591784 - 9591653
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||| | | || || ||||||||| ||  |||||| | | |||| |||| ||  ||||||||| | || ||||| |||||||| |    
T  9591784 aagccttatagtgcccctgttgataagggcaagcagagaatggttgatgataggcggcctaagaagaaggatgctcctgcagagattgtctgtttcaact 9591685  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||| || |||||||||||||| |||||||||    
T  9591684 gtggcgagaaaggccacaagagcaatgtttgt 9591653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 15627945 - 15627820
Alignment:
Q  1 aaagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaag 100  Q
    |||||| || ||||| |||||| | || ||||| || ||  ||||||||||||||||||| |  | || |||| ||||| ||||  ||||||| | |||     
T  15627945 aaagccttacagtgctcctgctgataagggtaaacaaagggtgaatgatgagaagaggcctagaaagaaagatactcctgctgaagttgtttgctacaac 15627846  T
Q  101 tgtggtgaaaaaggccacaagagtaa 126  Q
    |||||||| |||||||||||||||||    
T  15627845 tgtggtgagaaaggccacaagagtaa 15627820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 11984323 - 11984281
Alignment:
Q  91 ttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| |||||||| |||||||||||||| |||||||||    
T  11984323 ttgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 11984281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 34797 - 34526
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||| ||||||||| |||||| |||| |||||||| || || |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  34797 aagctgtatagtgctcctgctgacaagggtaagcaaaggttaaatgatgagaggaggcccaagaggagagatgctcctactgacattgtttgtttcaagt 34698  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||||||||||||||||||| |||||  |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  34697 gtggtgagaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtgtggttagaaaggacacacattagttgattgtaagcgtgg 34598  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||| ||||||| || |||| ||| |||||||||||||| | |||||||||||||||||| |||||||||||    
T  34597 ggacgttgtttgttataactgcaatgaggaaggtcatattagttcgtagtgtacgcagccgaagaaggttag 34526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 62616 - 62887
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||  |||||||    
T  62616 aagccgtatagtgcccctgctgacaagggtaagcagagattgaatgatgagaggaggcctaagaggagagatgctcctactgatattgtttaattcaagt 62715  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||||||||||||||||||| |||||||  ||||||||||||||||| |||||||||| ||||| ||||||||||| |||||||||||||||    
T  62716 gtggtgagaaaggccacaagagtaatgtatgtgaccatgatgagaagaagtgctttaggtgtggtcagaaagtacacactttagctgattgtaagcgtgg 62815  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||  |||||| ||||||||  || ||  |||||||||||| |||| ||||||||||||||||||| |||||    
T  62816 ggatgttgttttctacaactgtaatgaataaggtcatatcagttcgcagtgtacgcagcctaagaaagttag 62887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 65211 - 65320
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcgga 170  Q
    ||||||||| ||||  ||||||||| ||||||||| || ||||||||||||||||||||||||  |  ||||||||| ||||||||||||||||||| ||    
T  65211 gatgctcctgctgaggttgtttgttacaagtgtggcgagaaaggccacaagagtaatgtttgtaccaaagatgagaaaaagtgcttcaggtgtggtcaga 65310  T
Q  171 aaggacacac 180  Q
    ||||||||||    
T  65311 aaggacacac 65320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 1155 - 1426
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| ||||| |||||  |||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||    
T  1155 aagccatacagtgctcctgctgacaagggtaaacagaggctgaatgatgagaggaggcccaagaggagagatgctcctactgagataatttgtttcaagt 1254  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||    
T  1255 gtggtgaaaaaggccacaagagtaatgcttgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgaatgtaagcgtgg 1354  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| |||||||||||||  | ||| |||||||||||||||| |||| ||||||| |||||||||||||||||    
T  1355 ggatattgtttgctacacttgcaatgaggaaggtcatatcagttcgcagtgtactcagcctaagaaggttag 1426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 659 - 930
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||  |||| || |||||||| || |||||||||| ||||||||||||||||||||||||||| || |||| ||| |||||||    
T  659 aagccgtatagtgctcctgccgacaaggggaagcagaggttaaatgatgagaggaggcccaagaggagagatgctcctacggacattgattgcttcaagt 758  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||| ||||||||  ||| |||||||||||||||    
T  759 gtggtgaaaaaggccacaagagtaatgtttgtgatagagatgagaagaagtgcttcaggtgtggtcagaagggacacacactagctgattgtaagcgtgg 858  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||||||||||| || |||| |||||||||||| ||||||| |||| ||||||||||||| |||||||||||    
T  859 ggacattgtttgttataactgcaacgaggaaggacatatcagttcgcagtgtacgcagccaaagaaggttag 930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 8204 - 7933
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| ||||| |||||  |||||||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||    
T  8204 aagccatacagtgctcctgctgacaagggtaaacagaggctgaatgatgagaggaggcccaagaggagagatgctcctactgagataatttgtttcaagt 8105  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||    
T  8104 gtggtgaaaaaggccacaagagtaatgcttgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgaatgtaagcgtgg 8005  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| |||||||||||||  | ||| |||||||||||||||| |||| ||||||| |||||||||||||||||    
T  8004 ggatattgtttgctacacttgcaatgaggaaggtcatatcagttcgcagtgtactcagcctaagaaggttag 7933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 4e-90; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 21738949 - 21739220
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||| |||| |||| |||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||| ||| |||| |||||||    
T  21738949 aagccatatagcgcccatgctgacaagggtaagcagagattgaatgatgagaggaggcctaagaggagaggtgctcctactgagattatttgcttcaagt 21739048  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  21739049 gtggtgagaaaggccacaagagtaatgtttgtgatcgagatgagaagaagtgctttaggtgtggtcagaaaggacacaccttagttgattgtaagcgtgg 21739148  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||  || ||||||||||||  || || ||||||||||||| |||| |||||||| ||||||||||||||||    
T  21739149 ggatgttttttgctacaactataatgaagaaggtcatatcagttcgcagtgtacggagcctaagaaggttag 21739220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 21742468 - 21742736
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| ||| || |||| |||||||||||| |||||||||||| |||||| ||||||||||||||||||||||| ||| |||| ||||||||||    
T  21742468 ccgtatagtgctcctactgacaagggtaagcagagactgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtg 21742567  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||| || | |||||| |||||||||||    
T  21742568 gtgagaaaggccacaagagtaatgtatgtgaccgagatgagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtgggga 21742667  T
Q  205 cattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
      |||||||||||||||  || |||||||| ||||| | |||| |||||||||||||||||||||||||    
T  21742668 tgttgtttgctacaactgtaatgaggaaggacatattagttcgcagtgtacgcagcctaagaaggttag 21742736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 22015658 - 22015929
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| |||||| ||||| | |||||||||| |||||| |||| |||||||||||||||  |||||||||| |||||||    
T  22015658 aagccgtatagtgctcctgctgacaagggtaagaagagaataaatgatgagaggaggccaaagaagagagatgctcctacaaatattgtttgattcaagt 22015757  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| ||||||||||| || ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  22015758 gtggagaaaaaggccaaaaaagtaatgtttgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctgattgcaagcgtgg 22015857  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||  ||||||| || |||| ||||||||||| |||||| | || | ||||||||||||| |||||||||||    
T  22015858 ggatgttgtttgttataactgcaacgaggaagatcatattagtttgcagtgtacgcagccgaagaaggttag 22015929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 8 - 272
Target Start/End: Complemental strand, 19857745 - 19857481
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| ||||||||||| ||||||||||||| |||||| ||||||||||||||| |||| || |||||||| |||||||||||||    
T  19857745 tatagtgctcctgctgacaagggtaagcagaggttgaatgatgagaggaggcctaagaggagagatgcttctaccgagattgtttgcttcaagtgtggtg 19857646  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    |||||||||||||||||||||| |||||  ||||||||||||| |||||||||||||||| ||||||||||||  ||| |||||||||||| || |||||    
T  19857645 aaaaaggccacaagagtaatgtctgtgatagagatgagaagaaatgcttcaggtgtggtcagaaaggacacacactagctgattgtaagcggggagacat 19857546  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggtta 272  Q
    |||||| || |||| ||| |||||||||||||| | |||| ||||||| || || ||||||||||    
T  19857545 tgtttgttataactacaatgaggaaggtcatattagttcgcagtgtactcaaccgaagaaggtta 19857481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 8 - 269
Target Start/End: Original strand, 24096534 - 24096795
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || || |||||  |||||||||||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  24096534 tatagtgctcctgctgacaaaggaaaacagaggatgaatgatgagaggaggcccaagaggagagatgctcctgttgagattgtttgtttcaagtgtggtg 24096633  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    ||||||||||||||||||||| |||||   ||||||||| |||||| || |||||||||| ||||||||||||  ||| ||| |||||||||||||||||    
T  24096634 aaaaaggccacaagagtaatgcttgtggtagagatgagaggaagtgttttaggtgtggtcagaaaggacacacactagctgaatgtaagcgtggggacat 24096733  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
    |||||||||||||| |||||| ||||||||||||| |||  ||||||| ||||| |||||||    
T  24096734 tgtttgctacaactgcaacgaagaaggtcatatcagttcacagtgtactcagccgaagaagg 24096795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 42 - 273
Target Start/End: Complemental strand, 21961464 - 21961233
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgaga 141  Q
    |||||||||| | ||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||    |||    
T  21961464 tgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttacaagtgtggtgaaaaaggccacaagagcaatgtttgtggtaaaga 21961365  T
Q  142 tgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatc 241  Q
    ||||| |||||||||||||||||||| ||| ||||||| ||||| ||| |||||||||||||| ||||| |||||||||| ||| |  || |||||||||    
T  21961364 tgagaggaagtgcttcaggtgtggtcagaagggacacagtttagctgaatgtaagcgtggggatattgtctgctacaactgcaatggagagggtcatatc 21961265  T
Q  242 aattcgtagtgtacgcagcctaagaaggttag 273  Q
    | |||| ||||  |  |||| |||||||||||    
T  21961264 agttcgcagtgccctgagccgaagaaggttag 21961233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 52989218 - 52988978
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || |||||||   |||||||||| | |||||| |||||||||||||||||| |||| |||||||||| |||||    
T  52989218 aagccttacagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagt 52989119  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||||||||||||| ||||||||||    |||||||| |||||| ||||||||||||| ||| || |||| ||||| ||| |||||||||||    
T  52989118 gtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgtttcaggtgtggtcagaagggtcacaatttagctgaatgtaagcgtgg 52989019  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    ||||||||| |||||||||| ||| |  || ||||||||||    
T  52989018 ggacattgtctgctacaactgcaatggagagggtcatatca 52988978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 20832819 - 20833084
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || ||||||||  |||||||||||| ||| |||||||||||||||||||||  |||||||||||| | ||||||||| |    
T  20832819 tatagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggagacccaagaggagagatgctcctgttgatattgtttgctacaagtgtggcg 20832918  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    | ||||||||||||||||||||||||     |||||||||||| || ||||||||||||| ||||||||||||  ||| |||||| ||| | || ||  |    
T  20832919 agaaaggccacaagagtaatgtttgtactaaagatgagaagaattgtttcaggtgtggtcagaaaggacacacactagctgattgcaagaggggagatgt 20833018  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||||| || |||| ||| ||||||||||| |||| |||| |||||||||| || | |||||||||    
T  20833019 tgtttgttataactgcaatgaggaaggtcacatcagttcgcagtgtacgcaaccgaggaaggttag 20833084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 38909748 - 38909979
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    ||||| |||||| |||| || ||||||||  ||  |||||| | |||||||||||||||||||||||||  ||| |||||||| | |||||||||||| |    
T  38909748 agtgctcctgctgacaaaggaaagcagaggatgggtgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgaga 38909847  T
Q  111 aaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgt 210  Q
    ||||||||||||||||||||||||   ||||||| | |||||||||||||||||||| ||| || |||| ||||| ||| || |||||||||||||||||    
T  38909848 aaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgt 38909947  T
Q  211 ttgctacaacttcaacgaggaaggtcatatca 242  Q
     || ||||||| ||| | ||||||||||||||    
T  38909948 ctgttacaactgcaatggggaaggtcatatca 38909979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 242
Target Start/End: Complemental strand, 48426306 - 48426110
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | |||||||||||||||||||||||||  ||| |||||||| | |||||||||||| |||||||||||||||||||||||||   |||||||     
T  48426306 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 48426207  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||||| ||| | ||||||||||||||    
T  48426206 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatca 48426110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 240
Target Start/End: Original strand, 31536910 - 31537148
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||||| |||| || ||||||||  |||||||||| | ||| ||||||||||||||||||||| |||| ||||||||||  ||||    
T  31536910 aagccttatagtgctcctgctgacaaaggaaagcagaggatgaatgatgataggagacccaagaggagagatgctccttctgagattgtttgttataagt 31537009  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||||||||||||| ||||||||||   ||||||| |  || |||||||||||||||| ||| || |||| ||||| ||| || ||||||||    
T  31537010 gtggtgagaaaggccacaagagcaatgtttgtggtagagatgatagaaaatgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtgg 31537109  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatat 240  Q
    ||||||||| || ||||||| ||| | |||||| |||||    
T  31537110 ggacattgtctgttacaactgcaatggggaaggccatat 31537148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 46 - 253
Target Start/End: Complemental strand, 20297816 - 20297609
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | ||||||||||||||||||||||||| |||| |||||||||| |||||||||||| ||| |||||||||||||||||||||    |||||||    
T  20297816 tgatgacaggaggcccaagaggagagatgctcctgctgagattgtttgttacaagtgtggtgagaaatgccacaagagtaatgtttgtggtaaagatgag 20297717  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatcaatt 245  Q
    | |||||||||||||||||||  ||| || ||||   ||| ||| || ||||||||||||||||| |||||||||| ||| |  ||||||||||| | ||    
T  20297716 aggaagtgcttcaggtgtggttagaagggtcacagcctagctgaatgcaagcgtggggacattgtctgctacaactgcaatggagaaggtcatattagtt 20297617  T
Q  246 cgtagtgt 253  Q
    | ||||||    
T  20297616 catagtgt 20297609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 46 - 240
Target Start/End: Complemental strand, 37680482 - 37680288
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | ||||||||||||||||||| |||||  ||| |||||||| | |||||||||||| |||||||||||||||||||||||||   |||||||     
T  37680482 tgatgataggaggcccaagaggagagatactcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 37680383  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatat 240  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||| | ||| |  |||||||||||    
T  37680382 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaattgcaatggagaaggtcatat 37680288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 273
Target Start/End: Original strand, 20074682 - 20074893
Alignment:
Q  62 aagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggt 161  Q
    ||||||||||||||||| ||||| ||||| |||| |||||||||||| |||||||||||||| |||||||||     |||||||| ||||||||||||||    
T  20074682 aagaggagagatgctcccactgagattgtgtgttacaagtgtggtgagaaaggccacaagagcaatgtttgtagtaaagatgagaggaagtgcttcaggt 20074781  T
Q  162 gtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcc 261  Q
    |||||| ||| || ||||  || | ||| || ||||||||||| ||||| |||||||||| ||| |  || ||||||||||||||| ||||| |  ||||    
T  20074782 gtggtcagaagggtcacagcttggctgaatgcaagcgtggggatattgtctgctacaactgcaatggagagggtcatatcaattcgcagtgtcctgagcc 20074881  T
Q  262 taagaaggttag 273  Q
     |||||||||||    
T  20074882 gaagaaggttag 20074893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 132
Target Start/End: Complemental strand, 18273213 - 18273114
Alignment:
Q  33 agcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttg 132  Q
    |||| |||||||||||||||| ||| || ||||| ||||||| ||||||||| |||||||||| |||||||||||| || ||||||||||||||||||||    
T  18273213 agcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtttg 18273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 21228469 - 21228600
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || ||||| |||||| ||   ||||| | | |||| |||| ||  ||||||||| | || |||||||||||||| |    
T  21228469 aagccctatagtgcccctgctgataagggtaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagattgtttgtttcaact 21228568  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||| || ||||||||||||||||||||||||    
T  21228569 gtggcgagaaaggccacaagagtaatgtttgt 21228600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 20853673 - 20853830
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| ||| ||||||| || || || |||||||||||||||| |  ||| ||| ||||| ||||||||  |||| ||||||||| ||| |    
T  20853673 aagccctacagtgctcctactaacaaaggcaaacaaagattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtttgttacaaat 20853772  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcag 159  Q
    ||||||  || |||||||||||||||| |||   || |||||||||||| || |||||    
T  20853773 gtggtgtgaagggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcag 20853830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 24784839 - 24784901
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | || ||||| |||||||| | |||||| |||||||||||||| |||||||||    
T  24784839 gatgctcctgcggagattgtctgtttcaattatggtgagaaaggccacaagagcaatgtttgt 24784901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 17041929 - 17042057
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || ||||||||| ||   ||||| | | |||| |||| ||  ||||||||| | || ||| |||||||||| |    
T  17041929 aagccttatagtgcccctgctgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctccttcggagatt-tttgtttcaact 17042027  T
Q  102 gtggtgaaaaaggccacaagagtaatgttt 131  Q
    |||| |  ||||||||||||||||||||||    
T  17042028 gtggcgggaaaggccacaagagtaatgttt 17042057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 727 - 998
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||| ||| |||||| |||| |||||| |||| || |||||||||| ||||||||||||||||||||||||||| || |||||||| |||||||    
T  727 aagccgtataatgctcctgctgacaagggtaagaagaggttaaatgatgagaggaggcccaagaggagagatgctcctaccgagattgtttgcttcaagt 826  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||||||||||    
T  827 gtggtgaaaaaggccacaagagtaacgtttgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggatacactctagctgattgtaagcgtgg 926  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||||||||||  || |||| ||| |||||||||||||||| |||| |||||||||| || |||||||||||    
T  927 ggacattgtttattataactgcaatgaggaaggtcatatcagttcgcagtgtacgcaaccgaagaaggttag 998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 17097 - 16826
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||  |||| |||||||||| | |||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||||||||    
T  17097 aagccgtatagtgctcctgccgacaagggtaagcagaaactgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgtttcaagt 16998  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| |||||||||||| || | |||||| ||||||||    
T  16997 gtggagagaaaggccacaagagtaatgtgtgtgatcgagatgagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtgg 16898  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| ||||||||||||||||  || |||||||| ||||| | |||| ||||||||||| |||||||||||||    
T  16897 ggatattgtttgctacaactgtaatgaggaaggacatattagttcgcagtgtacgcagactaagaaggttag 16826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 37399 - 37128
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| | |||  |||| ||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||| |||| |||||||    
T  37399 aagccgtatagtgctcttgccgacaagggtaagcagagattgaatgatgagaggaggcccaagaggagagacactcctactgatattttttgcttcaagt 37300  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||| ||||||||  ||| |||||||||| ||||    
T  37299 gtggcgagaaaggccacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggtcagaagggacacacactagctgattgtaagtgtgg 37200  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| ||||||||||| |||| ||| |||||||||||||||| |||  ||||||||||||| |||||||||||    
T  37199 ggatattgtttgctataactgcaatgaggaaggtcatatcagttcacagtgtacgcagccgaagaaggttag 37128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 154; Significance: 9e-82; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 5886 - 5629
Alignment:
Q  16 ccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggc 115  Q
    ||||||| |||| ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||| ||  |||| |||||||||||||| ||||||    
T  5886 ccctgctgacaagggtaagcagagattgaatgatgagaggaggcttaagaggagagatgctcctactgagataatttgcttcaagtgtggtgagaaaggc 5787  T
Q  116 cacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgct 215  Q
    ||||||||||| || ||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||  |||||||||    
T  5786 cacaagagtaacgtgtgtgatcgagatgagaagaagtgctttaggtgtggtcagaaaggacacactttagctgattgtaagcgtggggatgttgtttgct 5687  T
Q  216 acaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||| |  || || ||||||||||||| |||| |||||||||| ||||||||||||||    
T  5686 acaattgtaatgaagaaggtcatatcagttcgcagtgtacgcaacctaagaaggttag 5629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 240
Target Start/End: Original strand, 11643 - 11825
Alignment:
Q  58 gcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttc 157  Q
    |||||||||||||||||| ||   ||| ||||| || | |||||||||| | |||||||||||||||||||| ||||   ||||||| | ||||||||||    
T  11643 gcccaagaggagagatgcaccagatgagattgtatgatacaagtgtggtaagaaaggccacaagagtaatgtatgtggaagagatgataggaagtgcttc 11742  T
Q  158 aggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatat 240  Q
    |||||||||| ||| || |||| ||||| |||  | ||||||||||||||||| || ||||||| ||| |  |||||||||||    
T  11743 aggtgtggtcagaagggtcacagtttagctgaaagcaagcgtggggacattgtctgttacaactgcaatggagaaggtcatat 11825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 43158 - 42887
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||||||||||||||||| |||| ||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||||||||||    
T  43158 aagccgtatagtgcccctgctgacaagggtaaacagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgagataatttgtttcaagt 43059  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    || |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||  |||| |||||||||    
T  43058 gttgtgagaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgctttaggtgtagtcagaaaggacacactttagcggattttaagcgtgg 42959  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||  ||||||||||||| |  || |  ||||||||||| | |||| |||||||||| ||||||||| ||||    
T  42958 ggatgttgtttgctacaattgtaatgcagaaggtcatattagttcgcagtgtacgcaacctaagaagattag 42887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 23563191 - 23563462
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| | || | ||||||||| || ||| |||||| |||||||||||||||||||||||||||||| |||||||| |||||||    
T  23563191 aagccgtatagtgctcctgctgaaaaggataagcagaggttaaataatgagaggaggcccaagaggagagatgctcctactgacattgtttgcttcaagt 23563290  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| ||||||||||||  ||| ||| |||||| ||||    
T  23563291 gtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacacactagctgactgtaagggtgg 23563390  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     |||| |||||| || |||| ||| |||||||||||||| | |||| ||||||||||||| |||||||||||    
T  23563391 agacaatgtttgttataactgcaatgaggaaggtcatattagttcgcagtgtacgcagccgaagaaggttag 23563462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 11 - 269
Target Start/End: Original strand, 23077937 - 23078195
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    ||||| |||||| |||| || |||||||   |||||||||| | ||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||    
T  23077937 agtgctcctgctgacaaagggaagcagaagatgaatgatgataggaggcccaagaggagagatgctcctgctgagattgtatgtttcaagtgtggtgaaa 23078036  T
Q  111 aaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgt 210  Q
    |||||||||| || |||| |||||   ||||||||| ||| || ||||||||||||| ||||||||||||  ||| ||| ||||||||||| ||||||||    
T  23078037 aaggccacaaaagcaatgcttgtggtagagatgagaggaaatgtttcaggtgtggtcagaaaggacacaccctagctgaatgtaagcgtggagacattgt 23078136  T
Q  211 ttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
    ||||||||||| |||||| ||||||||||||| ||| |||||||| ||||| |||||||    
T  23078137 ttgctacaactgcaacgaagaaggtcatatcagttcatagtgtactcagccgaagaagg 23078195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 2 - 240
Target Start/End: Complemental strand, 20345627 - 20345389
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||||| |||| || |||||||   ||  |||||| | ||||||||||||||||||||||||| |||| |||||||||| |||||    
T  20345627 aagccttatagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcccaagaggagagatgctcctgctgagattgtttgttacaagt 20345528  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||| ||||||||||||||||||||    |||||| | |||||||||||||||||||| ||| || |||| | ||||||| || ||||||||    
T  20345527 gtggtgagaaagcccacaagagtaatgtttgtggtaaagatgataggaagtgcttcaggtgtggtcagaagggtcacagtctagttgaatgcaagcgtgg 20345428  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatat 240  Q
    ||||||||| |||||||||| ||| | ||||||||||||    
T  20345427 ggacattgtctgctacaactgcaatggggaaggtcatat 20345389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 22506024 - 22505805
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || |||||||   |||||||||| | |||||| |||||||||||||||||| |||| |||||||||| |||||    
T  22506024 aagccttacagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagt 22505925  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||||||||||||| ||||||||||    ||| |||| |||||||||||||||||||| ||  ||||| |  |||| ||| |||||||||||    
T  22505924 gtggtgagaaaggccacaagagcaatgtttgtggtaaagacgagaggaagtgcttcaggtgtggtcagatgggacatagcttagctgaatgtaagcgtgg 22505825  T
Q  202 ggacattgtttgctacaact 221  Q
    ||||||||| ||||||||||    
T  22505824 ggacattgtctgctacaact 22505805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 46 - 240
Target Start/End: Original strand, 14884058 - 14884252
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | ||||||||||||||||||||||||  |||| |||||||||| |||||||||||| |||||||||||||||||||| ||||   |||||||     
T  14884058 tgatgataggaggcccaagaggagagatgctccagctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtctgtgggagagatgat 14884157  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatat 240  Q
    | |||||||||||||||||||| ||| || |||| ||| | ||| || ||||||||||||||||| || ||||||| ||| | ||||||||||||    
T  14884158 aggaagtgcttcaggtgtggtcagaagggtcacagtttggctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatat 14884252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 21870301 - 21870438
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||||| || |||||| ||||||||||||||||||||||| ||  |||| |||||||    
T  21870301 aagccgtatagtgcccctgctgacaagggtaagcagaaattgaatgatgggaggaggcctaagaggagagatgctcctactgagataatttgcttcaagt 21870400  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga 139  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  21870401 gtggtgagaaagaccacaagagtaatgtttgtgaccga 21870438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 139
Target Start/End: Original strand, 21874581 - 21874718
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||||||| || |||||| ||||||||||||||||||||||| ||  |||| |||||||    
T  21874581 aagccgtatagtgcccctgctgacaagggtaagcagaaattgaatgatgggaggaggcctaagaggagagatgctcctactgagataatttgcttcaagt 21874680  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga 139  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  21874681 gtggtgagaaagaccacaagagtaatgtttgtgaccga 21874718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 46 - 221
Target Start/End: Complemental strand, 25851373 - 25851198
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | ||||||||||||||||||||||| |  ||| |||||||| | |||||||||||| |||||||||||||||||||||||||    ||||||     
T  25851373 tgatgataggaggcccaagaggagagatgctcttgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaaagatgat 25851274  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaact 221  Q
    | |||||||||||||||||||| ||| || |||| | ||| ||| |  |||||||| |||||||| ||||||||||    
T  25851273 aggaagtgcttcaggtgtggtcagaagggtcacagtctagctgaatacaagcgtggagacattgtctgctacaact 25851198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 17266360 - 17266520
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    |||||||||||||||||| |||| |||||||||||| | |||||||||| |||||| |  | ||| ||||||||| |||| || || ||||| |||||||    
T  17266360 ccgtatagtgcccctgctgacaagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgttttaagtgtg 17266459  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtgg 165  Q
    | || ||||| ||||||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  17266460 gcgagaaaggtcacaagagtaacgtttgt-accgaggatgagaagaagtgcttcaggtgtgg 17266520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 23669946 - 23669822
Alignment:
Q  33 agcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttg 132  Q
    |||| |||||||||||||||| ||| || |||||||||||||||||| |||| |||||||  | | |||||||||| |||||||||||||||||||||||    
T  23669946 agcaaagattgaatgatgagaggagacctaagaggagagatgctcctgctgagattgtttcctaccagtgtggtgagaaaggccacaagagtaatgtttg 23669847  T
Q  133 tgaccgagatgagaagaagtgcttc 157  Q
      |  | || |||||||||||||||    
T  23669846 caatggtgaggagaagaagtgcttc 23669822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 16258092 - 16258214
Alignment:
Q  35 cagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtg 134  Q
    |||||||||| |||||||| ||| || ||||||||||||| |||| |||| |||||||| | |||||||||||| || ||||||||||||||||||||      
T  16258092 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 16258191  T
Q  135 accgagatgagaagaagtgcttc 157  Q
    |  | || |||||||||||||||    
T  16258192 atggtgaggagaagaagtgcttc 16258214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 22591811 - 22591933
Alignment:
Q  35 cagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtg 134  Q
    |||||||||| |||||||| ||| || ||||||||||||| |||| |||| |||||||| | |||||||||||| || ||||||||||||||||||||      
T  22591811 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 22591910  T
Q  135 accgagatgagaagaagtgcttc 157  Q
    |  | || |||||||||||||||    
T  22591911 atggtgaggagaagaagtgcttc 22591933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 22595366 - 22595488
Alignment:
Q  35 cagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtg 134  Q
    |||||||||| |||||||| ||| || ||||||||||||| |||| |||| |||||||| | |||||||||||| || ||||||||||||||||||||      
T  22595366 cagagattgactgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgca 22595465  T
Q  135 accgagatgagaagaagtgcttc 157  Q
    |  | || |||||||||||||||    
T  22595466 atggtgaggagaagaagtgcttc 22595488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 21561084 - 21561176
Alignment:
Q  38 agattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtt 130  Q
    |||||||||||||||| ||| || ||||| ||||||| |||| |||| |||||||| |||||||||||| | || ||||||||||||||||||    
T  21561084 agattgaatgatgagaggagacctaagagaagagatgttcctgctgagattgtttgcttcaagtgtggtaagaagggccacaagagtaatgtt 21561176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 21983215 - 21983328
Alignment:
Q  17 cctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggcc 116  Q
    |||||| |||| || ||||| |||||||||||||||| ||| || ||||| ||||||| |||| |||| |||||||| |  | ||||||||| || ||||    
T  21983215 cctgctgacaaagggaagcaaagattgaatgatgagaggagacctaagagaagagatgttcctgctgagattgtttgctataggtgtggtgagaagggcc 21983314  T
Q  117 acaagagtaatgtt 130  Q
    ||||||||||||||    
T  21983315 acaagagtaatgtt 21983328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 273
Target Start/End: Complemental strand, 43122781 - 43122541
Alignment:
Q  33 agcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttg 132  Q
    |||| |||||||||||||||| ||| || ||||||||||||| || | | || |||||||| | ||||||||| || |  ||||||||||||||||| ||    
T  43122781 agcaaagattgaatgatgagaggagacctaagaggagagatgttcatgcagagattgtttgctacaagtgtggcgagaggggccacaagagtaatgtctg 43122682  T
Q  133 tgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaa 232  Q
      |  | || ||||||||||||||| | |||||   ||| || ||  |  ||| ||| || |||||||| || |||||||||| ||| |   |||| |||    
T  43122681 caatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatgcgatagctgaatgcaagcgtggtgatattgtttgcttcaattgtgacgaagaa 43122582  T
Q  233 ggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    || ||| ||| |||  ||||||| |||||||||||||||||    
T  43122581 ggacatctcagttcacagtgtacacagcctaagaaggttag 43122541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 18782408 - 18782346
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | || |||||||||||||| ||||| || ||||||||||||||||||||||||    
T  18782408 gatgctcctgcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 18782346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 159
Target Start/End: Complemental strand, 22465259 - 22465138
Alignment:
Q  38 agattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgacc 137  Q
    |||||||||||||||| |  ||| ||| ||||| ||||||||  |||| || |||||| ||| |||||||  || |||||||||||||||| |||   ||    
T  22465259 agattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttatttgttacaaatgtggtgtgaagggccacaagagtaatgcttgcatcc 22465160  T
Q  138 gagatgagaagaagtgcttcag 159  Q
     |||||||||||| || |||||    
T  22465159 aagatgagaagaaatgtttcag 22465138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 23461265 - 23461203
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | || ||||| | |||||| |||||||| |||||||||||||| |||||||||    
T  23461265 gatgctcctgcggaaattgtctatttcaattgtggtgagaaaggccacaagagcaatgtttgt 23461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 23526345 - 23526283
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| |||| ||||| ||||| || |||||||| |||||||||||||| |||| ||||    
T  23526345 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgcttgt 23526283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 20803891 - 20803830
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttg 132  Q
    ||||||||| | || ||||| |||||||| | |||||| |||||||||||||| ||||||||    
T  20803891 gatgctcctgcggagattgtctgtttcaattatggtgagaaaggccacaagagaaatgtttg 20803830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 2 - 255
Target Start/End: Complemental strand, 153952 - 153699
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||||| |||| ||||||||| || |||||||||||| |||||||||||||||||||||||| ||||| |||||||| |||||||    
T  153952 aagccatatagtgctcctgctgacaagggtaagcagcgactgaatgatgagaggaggcccaagaggagagatgctcccactgagattgtttgcttcaagt 153853  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||||||| |||| ||||||||||| |||||  |||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  153852 gtggtgaaaaaagccataagagtaatgtctgtgatagagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcgtgg 153753  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtac 255  Q
     |||||||||||||| |||| ||| ||||||||||| || | |||| |||||||    
T  153752 agacattgtttgctataactgcaatgaggaaggtcacattagttcgcagtgtac 153699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 8 - 273
Target Start/End: Complemental strand, 19456312 - 19456047
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || || || ||  |||||||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  19456312 tatagtgctcctgctgacaaaggaaaacaaaggctgaatgatgagaggaggcccaagaggagagatactcctactgagattgtttgcttcaagtgtggtg 19456213  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||||||||||  ||| ||||||||||||  ||| ||||||||||||||| |||||    
T  19456212 aaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtggtgtcagaaaggacacacactagatgattgtaagcgtggagacat 19456113  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||||||| |||| |||||||||||||||||| | |||||||||||| || || |||||||||||    
T  19456112 tgtttgctataactgcaacgaggaaggtcatattagttcgtagtgtactcaaccaaagaaggttag 19456047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 8 - 273
Target Start/End: Complemental strand, 19466457 - 19466192
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || || || ||  |||||||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||    
T  19466457 tatagtgctcctgctgacaaaggaaaacaaaggctgaatgatgagaggaggcccaagaggagagatactcctactgagattgtttgcttcaagtgtggtg 19466358  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    |||||||||||||||||||||| |||||  |||||||||||||||||||||||||  ||| ||||||||||||  ||| ||||||||||||||| |||||    
T  19466357 aaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcaggtggtgtcagaaaggacacacactagatgattgtaagcgtggagacat 19466258  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||||||| |||| |||||||||||||||||| | |||||||||||| || || |||||||||||    
T  19466257 tgtttgctataactgcaacgaggaaggtcatattagttcgtagtgtactcaaccaaagaaggttag 19466192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 21474895 - 21474678
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| ||||||||||   |||||||||||| |||||| | ||||||||||||||||||||| ||||||||||||||||    
T  21474895 aagccgtatagtgctcctgctgacaagggtaagcagatgctgaatgatgagaggaggcctaggaggagagatgctcctactgagattgtttgtttcaagt 21474796  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| | |||||   |||||||||||| || | ||| || ||||||||    
T  21474795 gtggtgaaaaaggccacaagagtaatgtatgtgaccgtgatgagaagaagtgtttccgatgtgggaagaaaggacacacattggctgagtgcaagcgtgg 21474696  T
Q  202 ggacattgtttgctacaa 219  Q
     || ||||| ||||||||    
T  21474695 tgatattgtgtgctacaa 21474678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 14376902 - 14377173
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| || || ||||| ||||||||||||| ||| ||||| |||||||||||||||  |||| ||||||| | |||||    
T  14376902 aagccgtatagtgctcctgctgacaagggaaaacagaggttgaatgatgagaggagacccaataggagagatgctcctgttgatgttgtttgctacaagt 14377001  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    | ||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  14377002 gcggtgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacactttagctaattgtaagcgtgg 14377101  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||  ||||||| || |||| ||| || || || || |||| |||| | ||||| ||||| |||||||||||    
T  14377102 tgatgttgtttgttataactgcaatgaagagggccacatcagttcgcaatgtacacagccgaagaaggttag 14377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 18797985 - 18797714
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| || ||||| |||||||||||||||| ||||||||||||||| |||||||||   |||||||||||||  ||||    
T  18797985 aagccgtatagtgctcctgctgacaagggaaagcaaagattgaatgatgagaggaggcccaagaggagggatgctcctgtggatattgtttgttataagt 18797886  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || |||||||||||||||||||||||      ||||||| |||| || ||||||||||||| ||| ||||||||| ||| |||||| ||||||||    
T  18797885 gtggcgagaaaggccacaagagtaatgtttgcactaaagatgagcagaaatgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtgg 18797786  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||| |||||||||| |||| ||| || ||||| ||||||| |||  |||| || || || |||||||||||    
T  18797785 tgacgttgtttgctataactgcaatgatgaaggccatatcagttcacagtgcactcaaccaaagaaggttag 18797714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 19438297 - 19438026
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||||| |||| ||||||||||| || |||||||||| ||||||||||||||||||||||||| |||| || ||| ||| |||||    
T  19438297 aagccatatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaagaggagagatgctcctgctgagatcgttcgttacaagt 19438198  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||||||||  |||||||||||||     ||||||||| ||||| ||||||||||||| ||||||||||||| ||| |||||| ||||||||    
T  19438197 gtggtgagaaaggccacttgagtaatgtttgtactaaagatgagaataagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtgg 19438098  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||  |||| || || |||| |||||| ||  | ||||||| |||| |||| || ||||| |||||||||||    
T  19438097 tgatgttgtatgttataactgcaacgaagagcgccatatcagttcgcagtgcacacagccgaagaaggttag 19438026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 8 - 258
Target Start/End: Original strand, 24515406 - 24515656
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || || |||||  |||||||||||| |||||||||||||||||||||||||  ||||||||||||||  ||||||||||    
T  24515406 tatagtgctcctgctgacaagggaaaacagaggctgaatgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgttataagtgtggtg 24515505  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    | ||||||||||||||||||||||||     ||||||||||||||| ||||||||||||| |||| |||||||  ||| |||||| ||| | || ||  |    
T  24515506 agaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaaaagacacacactagctgattggaagaggggagatgt 24515605  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgca 258  Q
    |||||| || |||| ||| ||||||||||| |||| |||| ||||||||||    
T  24515606 tgtttgttataactgcaatgaggaaggtcacatcagttcgcagtgtacgca 24515656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 25771136 - 25770922
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||||| |||| ||||| |||||  |||||||||||| |||||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  25771136 ccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattgtctgtttcaagtgtg 25771037  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    |||||||||||||||||| |||| | |||||||| |||||||||||||| ||  | |||||   |||||||||||| |||  |||||| |||||||| ||    
T  25771036 gtgaaaaaggccacaagaataatttatgtgaccgtgatgagaagaagtgttttcgatgtgggacgaaaggacacacattatctgattgcaagcgtggtga 25770937  T
Q  205 cattgtttgctacaa 219  Q
     ||||| ||||||||    
T  25770936 tattgtgtgctacaa 25770922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 270
Target Start/End: Original strand, 10465851 - 10466102
Alignment:
Q  19 tgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccac 118  Q
    |||| |||| || ||||||| | |||||||||| | |||||||||||||||||||| |||| |||| ||||| |||| ||||||||||||||||||||||    
T  10465851 tgctgacaagggaaagcagaaaatgaatgatgataggaggcccaagaggagagatgttcctgctgagattgtctgttacaagtgtggtgaaaaaggccac 10465950  T
Q  119 aagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctaca 218  Q
    ||||| |||| |||||   ||||||||| ||| || || |||||||||| ||| ||||||||  ||| ||| |||||||||||||||||||| ||||| |    
T  10465951 aagagcaatgcttgtggtagagatgagaggaaatgttttaggtgtggtcagaagggacacaccctagctgaatgtaagcgtggggacattgtctgctata 10466050  T
Q  219 acttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggt 270  Q
    ||| ||| || ||||||||||| | |||  ||||||| ||||| ||||||||    
T  10466051 actgcaatgaagaaggtcatattagttcacagtgtactcagccgaagaaggt 10466102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 21566977 - 21567155
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| |||||||||||| |||| || |||||  || ||||||||||||  |||||||||||||||||||||||| |||| || ||||| || ||||    
T  21566977 aagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagagaaggcccaagaggagagatgctcctgctgaaatagtttgctttaagt 21567076  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacac 180  Q
    |||| || ||||||||||| ||||||||||||     ||||||||||||||||||||||||||||| ||||||||||||    
T  21567077 gtggcgagaaaggccacaaaagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacac 21567155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 46 - 240
Target Start/End: Complemental strand, 24367651 - 24367457
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | ||||||||||||||||||||||| |  ||| |||||||| | |||||||||||| |||||||||||||||||||||||||   |||||||     
T  24367651 tgatgataggaggcccaagaggagagatgctcatgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 24367552  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatat 240  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||| ||||||||||| || ||||| | ||| |  |||||||||||    
T  24367551 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcggggggacattgtctgttacaattgcaatggagaaggtcatat 24367457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 157
Target Start/End: Original strand, 19486280 - 19486435
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || ||||| |||||||||||||||| ||| || ||||| ||||||| ||||||||| |||||||| | |||||    
T  19486280 aagccctacagtgctcctgctgacaaagggaagcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagt 19486379  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttc 157  Q
    ||||||| || ||||||||||||||||||||  |  | ||||||||||||||||||    
T  19486380 gtggtgagaagggccacaagagtaatgtttgcaatggtgatgagaagaagtgcttc 19486435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 16813902 - 16813780
Alignment:
Q  35 cagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtg 134  Q
    ||||||||||||||||||| ||| || ||||||||||||| |||| |||| |||||||| | |||||||||||| |||||||||||||||||||||||      
T  16813902 cagagattgaatgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgca 16813803  T
Q  135 accgagatgagaagaagtgcttc 157  Q
    |  | || |||||||||||||||    
T  16813802 atggtgaggagaagaagtgcttc 16813780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 8720727 - 8720846
Alignment:
Q  38 agattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgacc 137  Q
    |||||||||||||||| |||||| ||||||||||||| ||||  ||| |||||||| | |||||||||||| |||||||||||||||||||||||  |      
T  8720727 agattgaatgatgagaggaggcctaagaggagagatgatcctgatgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgcaatg 8720826  T
Q  138 gagatgagaagaagtgcttc 157  Q
    | || |||||||||||||||    
T  8720827 gtgaggagaagaagtgcttc 8720846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 273
Target Start/End: Original strand, 34642659 - 34642843
Alignment:
Q  89 gtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttg 188  Q
    ||||| || |||||||| || || |||||||| ||||||||||||  |  ||||||||||||||||||||||||||| | ||| || |||   |||| ||    
T  34642659 gtttgctttaagtgtggcgagaagggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctg 34642758  T
Q  189 attgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||||| ||||| || ||||| |||||||||| ||| | ||| |||||||||| |||  |||| || || || |||||||||||    
T  34642759 attgtaaacgtggtgatattgtatgctacaactgcaatggggagggtcatatcagttctcagtgcactcaaccgaagaaggttag 34642843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 15462631 - 15462459
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| ||||||||||| || || ||||||||||||||||||| |  ||| |   |||||||  |||||  |||| |||| |||| |||||    
T  15462631 aagccctacagtgctcctgctaacaaaggcaaacagagattgaatgatgagaggcagcctagagggagagagactcctgttgatgttgtgtgttacaagt 15462532  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaagg 174  Q
    ||||||  |||||||||||||||||||| ||   | ||||||||||||| || ||||| || |||| ||||||    
T  15462531 gtggtgcgaaaggccacaagagtaatgtctgcaccagagatgagaagaaatgtttcagatgcggtcagaaagg 15462459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 25958782 - 25958864
Alignment:
Q  45 atgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaat 127  Q
    ||||||||| ||| || ||||| ||||||||||||||||| |||||||| | || ||||||| | |||||||||| |||||||    
T  25958782 atgatgagaggagacctaagagtagagatgctcctactgagattgtttgctacaggtgtggtaagaaaggccacaggagtaat 25958864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 20010487 - 20010645
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgt-ttgtttcaag 100  Q
    ||||| || ||||| ||| ||||||| || || || |||||||||||||||| |  ||| ||| ||||| ||||||||  |||| |||| ||||| |||     
T  20010487 aagccctacagtgctcctactaacaaaggcaaacaaagattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtattgttacaaa 20010586  T
Q  101 tgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcag 159  Q
    |||||||  || |||||||||||||||| |||   || |||||||||||| || |||||    
T  20010587 tgtggtgtgaagggccacaagagtaatgcttgcacccaagatgagaagaaatgtttcag 20010645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 21765038 - 21764976
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | || ||||| |||||||| |||||||| |||||||||||||| |||||||||    
T  21765038 gatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 21764976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 30678050 - 30678141
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||||||| |||||| |  | || |||| ||||| ||||  ||||||| | |||||||||||| ||  ||||||||||||||||||||    
T  30678050 tgaatgatgagaggaggcctagaaagaaagatactcctgctgaggttgtttgctacaagtgtggtgagaagagccacaagagtaatgtttgt 30678141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 27559044 - 27559086
Alignment:
Q  91 ttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| |||||||| |||||||||||||||| |||||||    
T  27559044 ttgtttcaattgtggtgagaaaggccacaagagtactgtttgt 27559086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 23081676 - 23081587
Alignment:
Q  44 aatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||||| | |||| | || || ||||||||||  ||| ||||||||||  |  |||||||| ||||||||||||||||||| ||||    
T  23081676 aatgatgagaggcggcctaggaagaaagatgctcctgttgagattgtttgttatacttgtggtgagaaaggccacaagagtaatgcttgt 23081587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 716 - 956
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||| | |||||| |||| ||||||||| || |||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||    
T  716 aagccatatagtactcctgctgacaagggtaagcagcgactgaatgatgagaggaggcccaagaggagagatgctcctatggatattgtttgcttcaagt 815  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||||||||||| |||||||| ||||||||||||  ||| |||||||||||||||    
T  816 gtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcatgtgtggtcagaaaggacacacactagctgattgtaagcgtgg 915  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
     |||||||||||||| |||| ||||||||||||||| ||||    
T  916 tgacattgtttgctataactgcaacgaggaaggtcacatca 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 4151 - 4419
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||||| |||| ||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||| ||| |||| ||||||||||    
T  4151 ccgtatagtgctcctgctgacaaaggtaaacagaggttgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgcttcaagtgtg 4250  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    |||| |||| | |||| |||||||| ||||| |||||||||||||||||||| |||||||||| |||||||||||| || | |||||| |||||||||||    
T  4251 gtgagaaagactacaaaagtaatgtgtgtgatcgagatgagaagaagtgctttaggtgtggtcagaaaggacacacattggctgattgcaagcgtgggga 4350  T
Q  205 cattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||||||||||||||||  || |||||||| ||||| | |||| |||||||||||||||||||||||||    
T  4351 tattgtttgctacaactgtaatgaggaaggacatattagttcgcagtgtacgcagcctaagaaggttag 4419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 70565 - 70297
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||||| |||| ||||| |||||  |||||||||||| |||||| ||||||||||||||||||||||| ||| |||| || |||||||    
T  70565 ccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgctttaagtgtg 70466  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| | |||||||||||| || | |||||| |||||||||||    
T  70465 gtgagaaaggccacaagagtaatgtgtgtgaccgagatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagcgtgggga 70366  T
Q  205 cattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||||||||||||||||  || |||||||| ||||| | |||| |||||||||||||||||||||||||    
T  70365 tattgtttgctacaactgtaatgaggaaggacatattagttcgcagtgtacgcagcctaagaaggttag 70297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 148; Significance: 4e-78; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 30084 - 29813
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| ||||||||||| || |||||||||| |||||||||||||||||||| ||||||||| || ||||| |||||||    
T  30084 aagccgtatagtgctcctgctgacaagggtaagcagagtttaaatgatgagaggaggcccaagaggagagatgttcctactgacatagtttgcttcaagt 29985  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||  || ||||||||| ||| |||||||||| ||||    
T  29984 gtggtgagaaaggccacaagagtaacgtttgtgatagagatgagaagaagtgcttcaggtgtggtcaaaagggacacactctagctgattgtaagtgtgg 29885  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||||| ||||| || |  | ||| |||||||||||||||| |||| |||||||||| || |||||||||||    
T  29884 ggacatcgtttgttatatttgcaatgaggaaggtcatatcagttcgcagtgtacgcaaccgaagaaggttag 29813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 64449 - 64645
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    |||||||||||||| ||| |||| || ||||||||| |||||||||| | |||||| || ||||| ||||||||| |||| || ||||||| ||||||||    
T  64449 ccgtatagtgccccggctgacaagggaaagcagagactgaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtg 64548  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    | || |||||||||||||||||||||||| ||| | ||||||||||| || ||||||||||||| ||||||||||||  ||| | |||| ||||||||    
T  64549 gcgagaaaggccacaagagtaatgtttgt-accaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtgg 64645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 49027 - 49223
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    |||||||||||||| ||| |||| || ||||||||| |||||||||| | |||||| || ||||| ||||||||| |||| || ||||||| ||||||||    
T  49027 ccgtatagtgccccggctgacaagggaaagcagagactgaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtg 49126  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    | || || ||||||||||||||||||||| ||| | ||||||||||| || ||||||||||||| ||||||||||||  ||| | |||| ||||||||    
T  49127 gcgagaagggccacaagagtaatgtttgt-accaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtgg 49223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 201
Target Start/End: Original strand, 58061 - 58257
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    |||||||||||||| ||| |||| || ||||||||| |||||||||| | |||||| || ||||| ||||||||| |||| || ||||||| ||||||||    
T  58061 ccgtatagtgccccggctgacaagggaaagcagagactgaatgatgaaaggaggccgaataggagggatgctcctgctgagatagtttgttacaagtgtg 58160  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    | || || ||||||||||||||||||||| ||| | ||||||||||| || ||||||||||||| ||||||||||||  ||| | |||| ||||||||    
T  58161 gcgagaagggccacaagagtaatgtttgt-accaaggatgagaagaaatgtttcaggtgtggtcagaaaggacacacactagctaattgcaagcgtgg 58257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 128 - 399
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| | ||| |||||| |||| ||||||||||| || |||||||||| |||||||||||| ||||| |||||||||||||||||||| |||||||    
T  128 aagccgtaaaatgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaagagcagagaggctcctactgatattgtttgcttcaagt 227  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || |||||||||||||||||||| |||||  ||||||||||||||||||||| |||||||| |||| |||||||  ||| |||||||||||||||    
T  228 gtggcgagaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcatgtgtggtcagaaaagacacacactagctgattgtaagcgtgg 327  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||||||||||| || |||| ||| |||||||||||||| | |||| | |||||||| || |||||||||||    
T  328 ggacattgtttgttataactgcaatgaggaaggtcatattagttcgcaatgtacgcaaccgaagaaggttag 399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 6264 - 5994
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| ||| || |||| |||||||| || || |||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||    
T  6264 aagccgtatagtgctcctactgacaagggtaagca-aggttaaatgatgagaggaggcccaagaggagagatgctcttactgacattgtttgcttcaagt 6166  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||||||||||| ||||||| ||||||||||||  ||| |||||| ||||||||    
T  6165 gtggtgaaaaaggccacaagagtaatgtctgtgatagagatgagaagaagtgcttcagatgtggtcagaaaggacacacactagctgattgcaagcgtgg 6066  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||||||||||| || |||| |||||||||||| ||||| | |||  ||||||| || || |||||||||||    
T  6065 ggacattgtttgttataactgcaacgaggaaggacatattagttcacagtgtacacaaccgaagaaggttag 5994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 142; Significance: 1e-74; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 1802 - 2067
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || || |||||  |||||||||||| |||||||||||||| |||||||||| |||| |||||||| | |||||||||||    
T  1802 tatagtgctcctgctgacaaaggaaaacagaggctgaatgatgagaggaggcccaagaggatagatgctcctgctgaaattgtttgctacaagtgtggtg 1901  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    | ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| || ||| |    
T  1902 agaaaggccacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcggggagacgt 2001  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||||||| |||| ||| |||||||||||||||| |||| ||||||| || || |||||||||||    
T  2002 tgtttgctataactgcaatgaggaaggtcatatcagttcgcagtgtacacaaccgaagaaggttag 2067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 8 - 247
Target Start/End: Original strand, 11756 - 11995
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || ||||||||| | |||||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||||| |    
T  11756 tatagtgctcctgctgacaaaggaaagcagagacttaatgatgagaggaggcccaagaggagagatgctcctactgagatcgtttgttacaagtgtggcg 11855  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    | ||||||||||||||||||||||||     ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| |||||||| |||||    
T  11856 agaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtggtgacat 11955  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcg 247  Q
    |||||| ||||  |  ||||| ||||||||||||| ||||    
T  11956 tgtttgttacatttggaacgaagaaggtcatatcagttcg 11995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 70817 - 70675
Alignment:
Q  17 cctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggcc 116  Q
    |||||| |||| || || || |||||||||||||||| | |||| | | ||||||||||||||  |||| ||||||||| |||||||||||  |||||||    
T  70817 cctgctgacaaaggaaaacaaagattgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaagtgtggtgcgaaaggcc 70718  T
Q  117 acaagagtaatgtttgtgaccgagatgagaagaagtgcttcag 159  Q
    ||||| ||||||| ||   |  ||||||||||||||| |||||    
T  70717 acaagggtaatgtctgcaccaaagatgagaagaagtgtttcag 70675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 122020 - 122141
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || || |||||| ||   ||||| | | |||| |||| ||  ||||||||  |||| |||  ||||||||| |    
T  122020 aagccctatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctccagctgagattacttgtttcaatt 122119  T
Q  102 gtggtgaaaaaggccacaagag 123  Q
    ||||||||||||||||||||||    
T  122120 gtggtgaaaaaggccacaagag 122141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 5e-71; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 31413828 - 31414083
Alignment:
Q  14 gcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaag 113  Q
    ||||||||| |||| || ||||||||| |||||||||||| |||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  31413828 gcccctgctgacaagggaaagcagagaatgaatgatgagaggaggcccaagaggagagatgctcctgttgaaattgtttgtttcaagtgtggtgaaaaag 31413927  T
Q  114 gccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttg 213  Q
    |||| ||||| |||| |||||   ||||||||| |||||| || |||||||||| ||||||||||||  ||| ||| |||||||||||||||||||||||    
T  31413928 gccataagagcaatgcttgtggtagagatgagaggaagtgttttaggtgtggtcagaaaggacacacactagctgaatgtaagcgtggggacattgtttg 31414027  T
Q  214 ctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
    |||||||| |||||| ||||||||||||| |||  ||||||| ||| | |||||||    
T  31414028 ctacaactgcaacgaagaaggtcatatcagttcacagtgtactcagtcgaagaagg 31414083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 22027567 - 22027835
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||| |||||||||||| |||| || ||||| |||||||||||||||| ||||||||| ||||||||||||||| |||| || ||||||| ||||||||    
T  22027567 ccgtacagtgcccctgctgacaagggaaagcaaagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatagtttgttacaagtgtg 22027666  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    | || ||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||| ||| || ||||| |||| |||||||||| | || ||    
T  22027667 gcgataaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaagggtcacacattagctgattgtaagaggggaga 22027766  T
Q  205 cattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    | |||||||||| |||| ||| || || || ||||||| |||  |||| || ||||| |||||||||||    
T  22027767 cgttgtttgctataactacaatgaagagggccatatcagttctcagtgcacacagccgaagaaggttag 22027835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 19985677 - 19985463
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||||||||||||||||  |||| ||||| |||||  ||| |||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  19985677 aagccgtatagtgcccctgcggacaagggtaaacagaggatgattgatgagaggaggcctaagaggagagatgctcctactgagattgtttgtttcaagt 19985578  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| |||||| |||||||||||||||| |||||||| |||||||||||||  ||||| ||||| | |||| ||||||| |||| |||||| ||| ||||    
T  19985577 gtggcgaaaaaagccacaagagtaatgtatgtgaccgtgatgagaagaagtatttcagatgtggacagaaatgacacacattagctgattgcaagagtgg 19985478  T
Q  202 ggacattgtttgcta 216  Q
    |||  ||||||||||    
T  19985477 ggatgttgtttgcta 19985463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 5 - 201
Target Start/End: Complemental strand, 21928922 - 21928726
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||||| |||| || || |||||  |||||||||||| |||||| | ||||||||||||||||||||| ||| |||||||||||||||    
T  21928922 ccgtatagtgctcctgctgacaaaggaaaacagaggctgaatgatgagaggaggcctaggaggagagatgctcctactgagattctttgtttcaagtgtg 21928823  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    | ||||| |||||| ||||||||||  |||||||||||||||||||||| ||||| ||||| | ||||||||||||||| | |||||| ||||||||    
T  21928822 gcgaaaagggccacgagagtaatgtaagtgaccgagatgagaagaagtgtttcagatgtggacagaaaggacacactttgggtgattgcaagcgtgg 21928726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 22374363 - 22374152
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||||||||||  ||| ||||| || ||| | ||||| |||| |||||| | |||||||||| |||||||||| ||||| |||||||||||||    
T  22374363 ccgtatagtgcccctgctgtcaaaggtaaacaaagacttaatgaggagaggaggcctaggaggagagattctcctactgagattgtctgtttcaagtgtg 22374264  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    ||||||||| ||||||||||||||| |||||||| ||||| |||||||| || ||||||||   |||||||||||| |||| |||||| |||||||| ||    
T  22374263 gtgaaaaagaccacaagagtaatgtatgtgaccgtgatgaaaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagcgtggtga 22374164  T
Q  205 cattgtttgcta 216  Q
     |||||||||||    
T  22374163 tattgtttgcta 22374152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 242
Target Start/End: Complemental strand, 28984364 - 28984168
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | ||||||||||||||||||||||||   ||| |||||||||| |||||||||||| |||||||||||||||||||||||||   |||||||     
T  28984364 tgatgataggaggcccaagaggagagatgctccagttgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 28984265  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||||| ||| | ||||||||||||||    
T  28984264 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatca 28984168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 11 - 269
Target Start/End: Original strand, 29300719 - 29300977
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    ||||| |||||| |||| || |||||||   |||||||||| | ||||||||||||| |||||| |||  |||| ||||||||||| |||||||||||||    
T  29300719 agtgctcctgctgacaaagggaagcagaagatgaatgatgataggaggcccaagaggggagatgttcccgctgaaattgtttgttttaagtgtggtgaaa 29300818  T
Q  111 aaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgt 210  Q
     |||||||||||| |||| |||||   ||||||| | |||||| || |||||||||| || |||||||||  ||| ||| ||||||||||||||||||||    
T  29300819 gaggccacaagagcaatgcttgtggtagagatgaaaggaagtgttttaggtgtggtcagagaggacacacactagctgaatgtaagcgtggggacattgt 29300918  T
Q  211 ttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
     | ||| |||| ||| || ||||||||||||| |||  ||||||| ||||| |||||||    
T  29300919 ctactataactgcaatgaagaaggtcatatcagttctcagtgtactcagccgaagaagg 29300977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 22054360 - 22054120
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| |||||||||||| | || |||||||||||| | |||||||||| |||||| || |||||||||||| || |||| || |||||||| ||||    
T  22054360 aagccgtacagtgcccctgctgataagggtaagcagagacttaatgatgagaggaggccgaataggagagatgcttctgctgagatagtttgttttaagt 22054261  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtg 200  Q
    |||| || |||||||||||||||||||||||| ||| | |||||||||||||||||||| ||||||| ||| || |||  |||||  ||||| |||||||    
T  22054260 gtggcgagaaaggccacaagagtaatgtttgt-accaaggatgagaagaagtgcttcagatgtggtcagaagggtcaccttttagcggattgcaagcgtg 22054162  T
Q  201 gggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | ||  |||| || || |||| |||||| || || |||||||    
T  22054161 gtgatgttgtatgttataactgcaacgaagagggccatatca 22054120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 16268552 - 16268725
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | |||||| |||| ||||||||||||| |||| |||||||||| |||||||||||| |||||||||||||||||||||||||    |||||||    
T  16268552 tgatgacaggaggcctaagaagagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagtaatgtttgtggtaaagatgag 16268651  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaa 219  Q
    | |||||||||||||||||||| ||| || || |   ||| ||| || ||||||||||| ||||| ||||||||    
T  16268652 aggaagtgcttcaggtgtggtcagaagggtcatagcctagctgaatgcaagcgtggggatattgtctgctacaa 16268725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 273
Target Start/End: Original strand, 6606784 - 6607024
Alignment:
Q  33 agcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttg 132  Q
    |||| |||||||||||||||| ||| || ||||| ||||||| ||||||||| |||||||| | |||||||||||| || ||||||||||||||||||||    
T  6606784 agcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttg 6606883  T
Q  133 tgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaa 232  Q
      |  | || ||||||||||||||| | |||||   ||| || || ||  ||| ||| || ||||||||||| |||||||||| ||| |   | || |||    
T  6606884 caatggtgaggagaagaagtgcttccgatgtggaaagaaggggcatacgatagctgaatgcaagcgtggggatattgtttgcttcaattgtgatgaagaa 6606983  T
Q  233 ggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    || ||| ||| |||  ||||||| |||||||||||||||||    
T  6606984 ggacatctcagttcacagtgtacacagcctaagaaggttag 6607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 269
Target Start/End: Complemental strand, 20391583 - 20391316
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || || || |||||||||||||||| ||| || ||||| ||||||| |||| |||| |||||||| | |||||    
T  20391583 aagccctacagtgctcctgctgacaaagggaaacaaagattgaatgatgagaggagacctaagagtagagatgttccttctgagattgtttgctacaagt 20391484  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| || |||||||||||||||||||   |  | |||||||| ||||||||| | |||||   |||||| || ||| |||  || || ||||||||    
T  20391483 gtggtgagaagggccacaagagtaatgtttccaatggtgatgagaaaaagtgcttccgatgtgggaagaaagggcatactatagcggaatgcaagcgtgg 20391384  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
     || |||||||||| ||| |   |||| ||||||||| | | |||| |||| | | ||||||||||||    
T  20391383 tgatattgtttgcttcaattgtgacgaagaaggtcatcttagttcgcagtgcaggaagcctaagaagg 20391316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 30310497 - 30310559
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | ||||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  30310497 gatgctcctgcggatattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 30310559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 22043324 - 22043193
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||||||| || |||| || || |||||| ||   ||||| | | |||| |||| ||  |||||||| ||||| |||  ||||||||| |    
T  22043324 aagccttatagtgcccctactgacaagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctccaactgagattacttgtttcaatt 22043225  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||| ||||||||||||||||||||||||    
T  22043224 gtggtgagaaaggccacaagagtaatgtttgt 22043193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 32603642 - 32603511
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || ||||||||| ||   ||||| | | | || |||| ||  ||||||||| | || |||||||||||||| |    
T  32603642 aagccttatagtgcccctgctgataagggcaagcagagaatggtcgatgataggcgacctaagaagaaggatgctccttcggaaattgtttgtttcaact 32603543  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||  ||||||||||||||||||||||||    
T  32603542 gtggtgggaaaggccacaagagtaatgtttgt 32603511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 15536880 - 15536749
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||  | || || ||||||||| ||   ||||| | | |||| |||| ||  ||||||||| | || ||| ||||||| || |    
T  15536880 aagccttatagtgcccctgccgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctccttcggagattatttgttttaatt 15536781  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||| ||| |||||||||||||||||||||||    
T  15536780 gtggcgaagaaggccacaagagtaatgtttgt 15536749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 21391214 - 21391276
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| |||| |||||||||||    |||||||| ||||||||||||||||||| ||||    
T  21391214 gatgctcctgctgagattgtttgtttttcttgtggtgagaaaggccacaagagtaatgcttgt 21391276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 21780540 - 21780602
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| |||| |||||||||||    |||||||| ||||||||||||||||||| ||||    
T  21780540 gatgctcctgctgagattgtttgtttttcttgtggtgagaaaggccacaagagtaatgcttgt 21780602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 134; Significance: 8e-70; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 39183 - 39448
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || ||||||||  |||||||||||| ||||||||||||||||||||||||| |||| |||||||| | |||||||||||    
T  39183 tatagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggaggcccaagaggagagatgctcctgctgagattgtttgctacaagtgtggtg 39282  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    | ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||| || ||  |    
T  39283 agaaaggccacaagagtaatgtttgtgataaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctaattgtaagcggggagatgt 39382  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||||||| |||| ||| |||||||||| ||||| |||| ||||||| ||  | |||||||||||    
T  39383 tgtttgctataactgcaatgaggaaggtcgtatcagttcgcagtgtacacaatcgaagaaggttag 39448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 14884 - 14753
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || || |||||| ||   ||||| | | |||| |||| ||  ||||||||| | || ||||||||||||||||    
T  14884 aagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgatatgcggcctaagaagaaggatgctcctgcggagattgtttgtttcaagt 14785  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||| || || |||||||||||||||||||||    
T  14784 gtggcgagaatggccacaagagtaatgtttgt 14753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 4297 - 4496
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| | ||| |||||| |||| ||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  4297 aagccgtacactgctcctgctgacaagggtaagcagagtttaaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgcttcaagt 4396  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || |||||||| |||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||||||| |||| |||||||||||||||    
T  4397 gtggcgagaaaggccaaaagagtaatgtttgtgatagagatgagaagaaatgcttcaggtgtggtcagaaaggacacacattagctgattgtaagcgtgg 4496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 7 - 216
Target Start/End: Original strand, 43268 - 43477
Alignment:
Q  7 gtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggt 106  Q
    ||||||||| ||| ||||||| ||||| |||||  |||||||||||| |||||| ||||||||||||||||||| ||| ||||| |||||||||||| ||    
T  43268 gtatagtgctccttctaacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctaatgagattgtctgtttcaagtgtcgt 43367  T
Q  107 gaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggaca 206  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||      
T  43368 gaaaagggccacaagagtaatgtgtgtgatcgagatgagaagaagtgctttaggtgtggacagaaaggacacactttagctgattgtaagcgtggggatg 43467  T
Q  207 ttgtttgcta 216  Q
    ||||||||||    
T  43468 ttgtttgcta 43477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 7e-64; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 23274655 - 23274384
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||| ||||||||| |||||| |||| ||||||||||| || |||||||||| |||||||||||||||||||||||||||||| ||||||||   |||||    
T  23274655 aagcagtatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaagaggagagatgctcctactgaaattgtttgcaacaagt 23274556  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||||||| | ||| |||||||| |||| |||||||||||| ||    
T  23274555 gtggtgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggacagaagggacacacattagctgattgtaagcgggg 23274456  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||||| |||||||| |||| ||| ||||| || ||||||| |||  |||| || || || |||||||||||    
T  23274455 agacatagtttgctataactgcaatgaggagggccatatcagttcacagtgcacacaaccgaagaaggttag 23274384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 19716407 - 19716669
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    ||||||| || | |||| || |||||||||||||||||||||| ||||||||| ||||||||||||||| |||| || ||||||| ||||||||| || |    
T  19716407 agtgcccttgttgacaagggaaagcagagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgaga 19716506  T
Q  111 aaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgt 210  Q
    |||||||||||||||||||||||     ||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||| |||||| | ||  ||||    
T  19716507 aaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtagtgatgttgt 19716606  T
Q  211 ttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| || |||| |||| | || || ||||||| |||| |||| || ||||| |||||||||||    
T  19716607 ttgttataactgcaacaaagagggccatatcagttcgcagtgcacacagccgaagaaggttag 19716669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 19720970 - 19721232
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    ||||||| || | |||| || |||||||||||||||||||||| ||||||||| ||||||||||||||| |||| || ||||||| ||||||||| || |    
T  19720970 agtgcccttgttgacaagggaaagcagagattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaagtgtggcgaga 19721069  T
Q  111 aaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgt 210  Q
    |||||||||||||||||||||||     ||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||| |||||| | ||  ||||    
T  19721070 aaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtagtgatgttgt 19721169  T
Q  211 ttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| || |||| |||| | || || ||||||| |||| |||| || ||||| |||||||||||    
T  19721170 ttgttataactgcaacaaagagggccatatcagttcgcagtgcacacagccgaagaaggttag 19721232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 23097399 - 23097577
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| |||||||||||| |||| || |||||  || |||||||||||| ||||||||||||||||||||||||| |||| || ||||| || ||||    
T  23097399 aagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagaggaggcccaagaggagagatgctcctgctgagatagtttgctttaagt 23097498  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacac 180  Q
    |||| || ||||||||||| ||||||||||||  |  |||| ||||||||||||||| |||||||| ||||||||||||    
T  23097499 gtggcgagaaaggccacaaaagtaatgtttgtaccaaagatcagaagaagtgcttcaagtgtggtcagaaaggacacac 23097577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 20848592 - 20848411
Alignment:
Q  60 ccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcag 159  Q
    ||||||||||||||||||||  ||| |||||| | | |||||||||||| |||||||||||||||||||||||||   ||||||| | ||||||||||||    
T  20848592 ccaagaggagagatgctcctgttgagattgtt-gctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcag 20848494  T
Q  160 gtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    |||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||||| ||| | ||||||||||||||    
T  20848493 gtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatca 20848411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 269
Target Start/End: Complemental strand, 28350937 - 28350670
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||| | |||| ||  |||| |||||||||||||||| ||| || ||||||||||||| |||| |||| |||||||| | |||||    
T  28350937 aagccctatagtgctcctgttgacaaaggggagcaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgagattgtttgctacaagt 28350838  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| |||||||||||||||||||||||  |  | |||||||| ||||||||| | |||||   |||||| || ||  ||| ||| || ||||||||    
T  28350837 gtggtgagaaaggccacaagagtaatgtttgcaatggtgatgagaaaaagtgcttccgatgtgggaagaaagggcatacgatagctgaatgcaagcgtgg 28350738  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
     || |||||||||| ||| |   |||| ||||||||| ||| |||| |||| | | ||||||||||||    
T  28350737 tgatattgtttgcttcaattgtgacgaagaaggtcatctcagttcgcagtgcaagaagcctaagaagg 28350670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 21901599 - 21901386
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || || ||||||||||||||||||| ||| || ||||| ||||||| ||||||||| |||||||| | |||||    
T  21901599 aagccctacagtgctcctgctgacaaagggaaacagagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaagt 21901500  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| || ||||||||||||||||||||  |  | |||||||| ||||||||| | |||||   |||||| || ||  ||| ||| || ||||||||    
T  21901499 gtggtgagaagggccacaagagtaatgtttgcaatggtgatgagaaaaagtgcttccgatgtgggaagaaagggcatacgatagctgaatgcaagcgtgg 21901400  T
Q  202 ggacattgtttgct 215  Q
     || ||||||||||    
T  21901399 tgatattgtttgct 21901386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 165
Target Start/End: Complemental strand, 12577412 - 12577252
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    |||||||||||||| ||| |||| |||||||||||| | |||||||||| |||||| |  | ||| ||||||||| |||| || || || || |||||||    
T  12577412 ccgtatagtgccccggctgacaagggtaagcagagacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtg 12577313  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtgg 165  Q
    | || ||||| ||||||||||| |||||| ||| | |||||||||||||| ||||| |||||    
T  12577312 gcgagaaaggtcacaagagtaacgtttgt-accaaggatgagaagaagtgtttcagatgtgg 12577252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 22462931 - 22462993
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | || |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  22462931 gatgctcctgcggagattgtttgtttcaactgtggtgagaaaggccacaagagtaatgtttgt 22462993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 23116440 - 23116571
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || ||||||||| ||   ||||| | | |||| |||| ||  ||||||||| | || |||||||||||||| |    
T  23116440 aagccttatagtgcccctgctgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctccttcagagattgtttgtttcaact 23116539  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||| |  ||||||||||||||||||||||||    
T  23116540 gtggcgggaaaggccacaagagtaatgtttgt 23116571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 23205306 - 23205245
Alignment:
Q  72 atgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||| | || |||||||||||||| ||||| || ||||||||||||||||||||||||    
T  23205306 atgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 23205245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 23676910 - 23676849
Alignment:
Q  72 atgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||| | || |||||||||||||| ||||| || ||||||||||||||||||||||||    
T  23676910 atgctccttcggagattgtttgtttcaactgtggcgagaaaggccacaagagtaatgtttgt 23676849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 24817221 - 24817352
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||||| | || ||||| || |||||||||||||||| |||||| |  | || |||| || ||||||| |||||||| |  |  |    
T  24817221 aagccttatagtgctcctgctgataagggtaaacaaagattgaatgatgagaggaggcctagaaagaaagatactactactgagattgtttgctatactt 24817320  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||| || |||||||||||||||| ||||    
T  24817321 gtggtgagaagggccacaagagtaatgcttgt 24817352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 11351161 - 11351223
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | || ||||| |||||||| |||||||| |||||||||||||| |||||||||    
T  11351161 gatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 11351223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 24657128 - 24657170
Alignment:
Q  91 ttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| |||||||| |||||||||||||||| |||||||    
T  24657128 ttgtttcaattgtggtgagaaaggccacaagagtactgtttgt 24657170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 24704932 - 24704994
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||| |||| |||| ||| | |||||||| |||||||| |||||||||||||| |||||||||    
T  24704932 gatgttcctgctgagattatctgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 24704994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 19647911 - 19647827
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaa 126  Q
    |||||||||||| ||||||||  | || |||| ||||||| ||| |||||||||||   ||||| || ||||| |||||||||||    
T  19647911 tgaatgatgagaggaggcccataaagaaagatactcctaccgatgttgtttgtttccgatgtggagagaaaggtcacaagagtaa 19647827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 273
Target Start/End: Complemental strand, 9074 - 8803
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| || |||||||   ||||||||||||  || |||||||||||||||||||||  ||| ||||||||||  ||||    
T  9074 aagccgtatagtgctcctgctgacaaagggaagcagaagctgaatgatgagagaagacccaagaggagagatgctcctgatgagattgtttgttataagt 8975  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || || |||||||||||||||||||||     ||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||| ||||||||    
T  8974 gtggcgagaatggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtgg 8875  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||||||||||||||||||| |||||| ||||| ||||||| |||| |||| || || || |||||||||||    
T  8874 tgacattgtttgctacaactgcaacgaagaaggccatatcagttcgcagtgcactcaaccgaagaaggttag 8803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 3088 - 2820
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||||| |||| || || ||||| ||||||||||||| |||||||||||||||||||||||||  ||| |||||||| | ||||||||    
T  3088 ccgtatagtgctcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtg 2989  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    || | ||||||||||||||||||||||||||   |||||||||||||| |||||||||||| | ||| |||||||| |||| |||||||||||| || ||    
T  2988 gtaagaaaggccacaagagtaatgtttgtgataaagatgagaagaagttcttcaggtgtggacagaagggacacacattagctgattgtaagcggggaga 2889  T
Q  205 cattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| |||||||| |||| ||| ||||| || ||||||| |||  ||||| | || || |||||||||||    
T  2888 catagtttgctataactgcaatgaggagggccatatcagttcacagtgtgcacaaccgaagaaggttag 2820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 7498 - 7299
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||| | |||| ||||||||||| ||||||||||||| ||||||||| ||||||||||||||| |||| |||||||||| |||||    
T  7498 aagccgtatagtgctcctgttgacaagggtaagcagaggttgaatgatgagaggaggcccaataggagagatgctcctgctgagattgtttgttacaagt 7399  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || ||||||||||||||||||||||||     ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||||    
T  7398 gtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtgg 7299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 269
Target Start/End: Complemental strand, 11437 - 11170
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||||| |||| || |||||||  ||||||||||| | ||| || |||||||||||||||||| |||| |||||||||| |||||    
T  11437 aagccttatagtgctcctgctgacaaaggaaagcagattttgaatgatgataggagtcctaagaggagagatgctccttctgagattgtttgttacaagt 11338  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||||||||||||| |||| |||||   ||||||||| |||||||||||||||||||| ||| |||||| |  ||| ||| |||||||||||    
T  11337 gtggtgaaaaaggccacaagagcaatgcttgtggtagagatgagaggaagtgcttcaggtgtggtcagaagggacacgcactagctgaatgtaagcgtgg 11238  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
    ||||||||| |||||||||| ||| || || ||||||||||  ||  ||||||| ||||| |||||||    
T  11237 ggacattgtctgctacaactgcaatgaagagggtcatatcagctcacagtgtactcagccgaagaagg 11170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 5746 - 5888
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||    
T  5746 aagccgtatagtgctcctgctgacaagggtaagcagagactgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttattacaagt 5845  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatga 144  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5846 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatga 5888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 8871 - 9136
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||  |||| || ||||||||  |||||||||||| |||||||||||||||||||||| || || | |||||||| | |||||||||||    
T  8871 tatagtgctcctgcagacaagggaaagcagaggctgaatgatgagaggaggcccaagaggagagatgcttctgctaagattgtttgctacaagtgtggtg 8970  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    | ||| |||||||||||||||| |||||    |||||||||||||||||||||||||||| |||||||||||| |||| | |||||||||| || ||  |    
T  8971 agaaaagccacaagagtaatgtctgtgataaggatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctaattgtaagcggggagatgt 9070  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||||||| |||| ||| ||||||||||| ||||||||| ||||||| ||  | |||||||||||    
T  9071 tgtttgctataactgcaatgaggaaggtcaaatcaattcgcagtgtacacaaacgaagaaggttag 9136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 8 - 273
Target Start/End: Complemental strand, 5507 - 5242
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| | || || || ||||| ||||||||||||| |||||||| |||||||||||||||| |||| |||||||| | |||||| || |    
T  5507 tatagtgctcctgctgataagggaaaacagaggttgaatgatgagaggaggcccacgaggagagatgctcctgctgagattgtttgctacaagtgcggcg 5408  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    | |||||||||| ||||||||| |||||   ||||||||||||||||||||||||||||  |||||||||||| |||| | |||||||||| || ||| |    
T  5407 agaaaggccacaggagtaatgtctgtgataaagatgagaagaagtgcttcaggtgtggttagaaaggacacacattagctaattgtaagcggggagacgt 5308  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||||| || |||| ||| |||||||||||||||| |||| ||||||| || || |||||||||||    
T  5307 tgtttgttataactgcaatgaggaaggtcatatcagttcgcagtgtactcaaccgaagaaggttag 5242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 2164 - 1980
Alignment:
Q  18 ctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggcca 117  Q
    ||||| |||| ||||| |||||  |||||||||||| |||||| |||||| |||||||||||||||| ||| |||| |||||||||||||| ||||||||    
T  2164 ctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggtgagatgctcctactgaaattatttgcttcaagtgtggtgagaaaggcca 2065  T
Q  118 caagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggg 202  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||| | ||||||||| ||||||| ||||||||||||||||    
T  2064 caagagtaatgtgtgtgaccgagatgagaagaagtgctttaggtgtggacagaaaggacatactttagctgattgtaagcgtggg 1980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 113; Significance: 3e-57; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 5 - 273
Target Start/End: Complemental strand, 21271 - 21003
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    |||||||||||||||||| |||| || || |||||  |||||||||||| |||||||||||||||||||||| || |||| |||||||| | ||||||||    
T  21271 ccgtatagtgcccctgctgacaaaggaaaacagaggctgaatgatgagaggaggcccaagaggagagatgcttctgctgagattgtttgctacaagtgtg 21172  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    |||| ||||||||||||||||||||||||     || |||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||| || ||    
T  21171 gtgagaaaggccacaagagtaatgtttgtactaaaggtgagaagaagtgcttcaggtgtggacagaagggacacacattagttgattgtaagcggggaga 21072  T
Q  205 cattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |||  ||||||| |||| ||| ||||| || | ||||| |||  ||||||| || || |||||||||||    
T  21071 cataatttgctataactgcaatgaggagggccgtatcagttcacagtgtacacaaccgaagaaggttag 21003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 331 - 602
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| |||||||||||| |||| || ||||||| |||||||||||||| ||||||||| ||||||||||||||| |||| || ||||||| ||| |    
T  331 aagccgtacagtgcccctgctgacaagggaaagcagatattgaatgatgagaggaggcccaataggagagatgctcctgctgagatcgtttgttacaaat 430  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtg 200  Q
    ||||    ||||||||||||||| |||||||| ||| | |||||||||||||| ||||||||||||| |||||||||||   ||| |||||| |||||||    
T  431 gtggcaggaaaggccacaagagtgatgtttgt-accaaggatgagaagaagtgtttcaggtgtggtcagaaaggacacagcctagctgattgcaagcgtg 529  T
Q  201 gggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    | ||  |||||||||| |||| ||| || || || ||||||| |||  |||| || ||||| |||||||||||    
T  530 gtgatgttgtttgctataactgcaatgaagagggccatatcagttcacagtgcacacagccgaagaaggttag 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 7 - 271
Target Start/End: Complemental strand, 52106 - 51842
Alignment:
Q  7 gtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggt 106  Q
    ||||||||| |||||| |||| ||||| |||||  |||||||||||| |||||| | ||||||||||||||||||||| ||| | |||||||||||||||    
T  52106 gtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaggaggagagatgctcctactgagattatctgtttcaagtgtggt 52007  T
Q  107 gaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggaca 206  Q
    || |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||  ||||||||||||||||| | |||| |||| ||| ||      
T  52006 gagaaaggccacaagagtaatgtatgtgatcgagatgagaagaagtgctttaggtgtggtaagaaaggacacactttagcttattgcaagcatggtgatg 51907  T
Q  207 ttgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggtt 271  Q
    |||||| ||| ||||   | || |||||| |||| | |||  ||||||||||||| |||||||||    
T  51906 ttgttttctataactgtgatgaagaaggtaatattagttcacagtgtacgcagccaaagaaggtt 51842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 98427 - 98698
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| | |||| |||| ||||||||||| || |||||||||| |||||||||| |||||||||||||| |||| || ||||||| |||||    
T  98427 aagccatatagtgctcatgctgacaagggtaagcagaggttaaatgatgagaggaggcccaagtggagagatgctcctgctgagatcgtttgttacaagt 98526  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || ||||||||||||||||||||||||     ||||||||||||||| ||||||||||||| ||||||||||||| ||| |||||| ||||||||    
T  98527 gtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaaaggacacactctagctgattgcaagcgtgg 98626  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||  |||| || || |||| |||||| || || ||||||| |||| |||| || ||||| |||||||||||    
T  98627 tgatgttgtatgttataactgcaacgaagagggccatatcagttcgcagtgcacacagccgaagaaggttag 98698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 176444 - 176233
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| ||||| ||||| | ||| |||||| |||||||||||| |||||| | |||||||||||||||||| || ||||| |||||||||||||    
T  176444 ccgtatagtgctcctgccaacaaagttaaacagagactgaatgatgagaggaggcctaggaggagagatgctcctacagagattgtctgtttcaagtgtg 176345  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||   |||||||||||| |||| |||||| |||||||| ||    
T  176344 gtgaaaaaggccacaagagtaatgtatgtgaccgtgatgagaagaagtgttttaggtgtggaaagaaaggacacacattagctgattgcaagcgtggtga 176245  T
Q  205 cattgtttgcta 216  Q
      ||||||||||    
T  176244 tgttgtttgcta 176233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 2 - 270
Target Start/End: Original strand, 1331 - 1599
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || || |||| | |||||||||| | ||||||||||||||||||||||||| |||| ||||| |||| |||||    
T  1331 aagccttacagtgctcctgctgacaagggaaaacagaaaatgaatgatgataggaggcccaagaggagagatgctcctgctgagattgtctgttacaagt 1430  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||||||||||||| |||| |||||   |||||| || ||| || || |||||||||  ||| ||||||||  ||| ||| |||||| ||||    
T  1431 gtggtgaaaaaggccacaagagcaatgcttgtggtagagatgtgaggaaatgttttaggtgtggttagaagggacacaccctagctgaatgtaagtgtgg 1530  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggt 270  Q
    |||||||||||||||||||| ||| || ||||||||||||| |||| ||||||| ||||| ||||||||    
T  1531 ggacattgtttgctacaactgcaatgaagaaggtcatatcagttcgcagtgtactcagccgaagaaggt 1599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 110 - 273
Target Start/End: Complemental strand, 13079 - 12916
Alignment:
Q  110 aaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattg 209  Q
    |||||||||||||||||||| |||||||| || |||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||  |||    
T  13079 aaaggccacaagagtaatgtatgtgaccgtgacgagaagaagtgctttaggtgtggtcagaaaggacacactttagctgattgtaagcgtggggatgttg 12980  T
Q  210 tttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||||||||||  || || ||||||||||||| |||| |||||||||||||||||||||||||    
T  12979 tttgctacaactgtaatgaagaaggtcatatcagttcgcagtgtacgcagcctaagaaggttag 12916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 185
Target Start/End: Original strand, 386 - 569
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| ||| || |||| ||||||||||| || ||||||||||  |||||||||||||||||||||||||  |||||||||||||||||||    
T  386 aagccgtatagtgctccttctgacaagggtaagcagaggttaaatgatgagagaaggcccaagaggagagatgctcctatagatattgtttgtttcaagt 485  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttag 185  Q
    |||| || ||||||||||| |||| |||||||||   ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  486 gtggcgagaaaggccacaaaagtagtgtttgtgatacagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattag 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 269
Target Start/End: Original strand, 4998 - 5256
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    ||||| |||||| |||| || ||||||||  |||||||||| | ||||||||||||||||||||||||| |||| ||||||||||  ||| ||| |||||    
T  4998 agtgctcctgctgacaaagggaagcagaggatgaatgatgataggaggcccaagaggagagatgctcctgctgaaattgtttgttaaaagagtgatgaaa 5097  T
Q  111 aaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgt 210  Q
    |||||||||| |  |||| |||||   || |||||| ||| || ||||||||||||| ||||||||||||  ||| ||| ||||||||||| ||||||||    
T  5098 aaggccacaaaaacaatgcttgtggtagaaatgagaggaaatgtttcaggtgtggtcagaaaggacacaccctagctgaatgtaagcgtggagacattgt 5197  T
Q  211 ttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaagg 269  Q
     |||||||||| |||||| ||||||||||||| ||| |||||||| ||||| |||||||    
T  5198 ctgctacaactgcaacgaagaaggtcatatcagttcatagtgtactcagccgaagaagg 5256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 116084 - 115934
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| |||||| ||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||| ||    
T  116084 aagccgtatagtgctcctgctgacaagggtaagaagagactgaatgatgagaggaggcctaagaggagggatgctcctactgatattgtttgtttcatgt 115985  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagt 152  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  115984 gtggtgaaaaaggccacaagagtaatgtttgtgatagagatgagaagaagt 115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 273
Target Start/End: Original strand, 164254 - 164516
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    |||||||||||| |||| || || ||||| ||||||||||||| ||||||||| |||||||| |||||| |||| || ||||||| ||||||||| || |    
T  164254 agtgcccctgctgacaagggaaaacagaggttgaatgatgagaggaggcccaataggagagacgctcctgctgagatcgtttgttacaagtgtggcgaga 164353  T
Q  111 aaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgt 210  Q
    |||||||||||||||||||||||      |||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||  |  ||||    
T  164354 aaggccacaagagtaatgtttgttctaaggatgagaagaagtgtttcaggtgtggtcagaaaggacacactttagttgattgcaagcgtggtaatgttgt 164453  T
Q  211 ttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||| || |||| ||| || ||||| ||||||| |||| | | ||| ||||| |||||||||||    
T  164454 ttgttataactgcaatgaagaaggccatatcagttcgcattatactcagccgaagaaggttag 164516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 30487 - 30549
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| |||| ||||| ||||| || |||||||| |||||||||||||| |||| ||||    
T  30487 gatgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgcttgt 30549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 105; Significance: 2e-52; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 198
Target Start/End: Complemental strand, 319703 - 319507
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| | |||||||||  |||||||||||| ||||||||| ||||||||||||||| |||  |||||||| | |||||    
T  319703 aagccgtatagtgctcctgctgacaaggataagcagaggctgaatgatgagaggaggcccaataggagagatgctcctgctgggattgtttgctacaagt 319604  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcg 198  Q
    |||| || |||||||||||||||||||| |||||   ||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||    
T  319603 gtggcgagaaaggccacaagagtaatgtctgtgataaagatgagaagaagtgcttcaggtgtggtcagaaaggacacacattagctaattgtaagcg 319507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 273
Target Start/End: Complemental strand, 326151 - 325896
Alignment:
Q  17 cctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggcc 116  Q
    ||||||||||| |||||||||||  |||||||||||| |||||| || ||||||||||||||| |||| |||||||| | ||||||||| || |||| ||    
T  326151 cctgctaacaagggtaagcagaggctgaatgatgagaggaggcc-aataggagagatgctcctgctgagattgtttgctacaagtgtggcgagaaagacc 326053  T
Q  117 acaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgcta 216  Q
    ||||||||||||| |||||   |||||||||||||||||||| |||||||| |||||||||||| |||| | |||||||||| || ||  ||||||| ||    
T  326052 acaagagtaatgtctgtgataaagatgagaagaagtgcttcaagtgtggtcagaaaggacacacattagctaattgtaagcggggagatgttgtttgtta 325953  T
Q  217 caacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     |||| ||| || || || ||||||| |||  |||| || || || |||||||||||    
T  325952 taactgcaatgaagagggccatatcagttcacagtgcacacaaccaaagaaggttag 325896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 200357 - 200476
Alignment:
Q  38 agattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgacc 137  Q
    |||||||||||||||| ||| || ||||| ||||| | ||||| ||| |||||||| | |||||||||||| || ||||||||||||||||||||  |      
T  200357 agattgaatgatgagaggagacctaagagaagagaagttcctaatgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgtttgcaatg 200456  T
Q  138 gagatgagaagaagtgcttc 157  Q
    | ||||||||||||||||||    
T  200457 gtgatgagaagaagtgcttc 200476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 9656 - 9887
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgaga 141  Q
    |||||||||||| |||||| || ||||||||||||||| ||||||||||||| | |||||||||||| || ||||||||||||||||| |||||    ||    
T  9656 tgaatgatgagaggaggccaaacaggagagatgctcctgctgatattgtttgctacaagtgtggtgagaagggccacaagagtaatgtctgtgataagga 9755  T
Q  142 tgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatc 241  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| || ||  |||||||||| |||| ||| ||||| || |||||     
T  9756 tgagaagaagtgcttcaggtgtggtcagaaaggacacaccctagttgattgtaagcggggagatgttgtttgctataactgcaatgaggagggccatata 9855  T
Q  242 aattcgtagtgtacgcagcctaagaaggttag 273  Q
    | |||  | |||||||| || |||||||||||    
T  9856 agttcacaatgtacgcaaccgaagaaggttag 9887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 5059 - 5324
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| || ||||| ||  ||||| |||||| | |||| | |||||||||||||||| |||| |||||||| | ||||||||| |    
T  5059 tatagtgctcctgctgacaagggaaagcaaaggctgaataatgagaggtggcctaggaggagagatgctcctgctgagattgtttgctacaagtgtggcg 5158  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacat 207  Q
    |||||||||||||||||||||| |||||    |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||  | ||  |    
T  5159 aaaaaggccacaagagtaatgtctgtgataaggatgagaagaagtgcttcaggtgtggtcagaagggacacactttagctgattgtaagcggagagatgt 5258  T
Q  208 tgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||||||| |||| ||| ||||| || ||||||| ||| ||||||||  | || |||||||||||    
T  5259 tgtttgctataactgcaatgaggagggccatatcagttcatagtgtacataaccgaagaaggttag 5324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 921 - 702
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || ||| |||  |||| |||||| | |||||| |||||||||||||||||| |||| |||||||||| |||||    
T  921 aagccttacagtgctcctgctgacaaaggaaagtagaagttgattgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagt 822  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||||||||||||||||||||| ||||||||||    |||||||| ||||||||||||||| |||| ||| || |||| ||||| ||| |||||||||||    
T  821 gtggtgaaaaaggccacaagagcaatgtttgtggtaaagatgagaggaagtgcttcaggtgcggtcagaagggtcacaatttagctgaatgtaagcgtgg 722  T
Q  202 ggacattgtttgctacaact 221  Q
    ||||||||| ||||||||||    
T  721 ggacattgtctgctacaact 702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 219
Target Start/End: Original strand, 1119 - 1333
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||| | |||| |||||||||||| |||||||||||| |||||| | ||||||||||||||||||| | ||||| ||||| || ||||    
T  1119 ccgtatagtgctcctgttgacaagggtaagcagagactgaatgatgagaggaggcctaggaggagagatgctcctactaagattgtctgttttaaatgtg 1218  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||||| ||| | |||||   |||||||||||| || | ||| ||||||||||| ||    
T  1219 gtgaaaaaggccacaagggtaatgtatgtgaccgtgatgagaagaagtgtttccgatgtgggaagaaaggacacacattggctgagtgtaagcgtggtga 1318  T
Q  205 cattgtttgctacaa 219  Q
     ||||| ||||||||    
T  1319 tattgtgtgctacaa 1333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 5 - 219
Target Start/End: Original strand, 28132 - 28346
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||| | |||| |||||||||||| |||||||||||| |||||| | ||||||||||||||||||| | ||||| ||||| || ||||    
T  28132 ccgtatagtgctcctgttgacaagggtaagcagagactgaatgatgagaggaggcctaggaggagagatgctcctactaagattgtctgttttaaatgtg 28231  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||||| ||| | |||||   |||||||||||| || | ||| ||||||||||| ||    
T  28232 gtgaaaaaggccacaagggtaatgtatgtgaccgtgatgagaagaagtgtttccgatgtgggaagaaaggacacacattggctgagtgtaagcgtggtga 28331  T
Q  205 cattgtttgctacaa 219  Q
     ||||| ||||||||    
T  28332 tattgtgtgctacaa 28346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 1451 - 1691
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || |||||||   ||| |||||| | |||||| |||||||||||||||||| |||| |||||||||| |||||    
T  1451 aagccttacagtgctcctgctgacaaaggaaagcagaagatgagtgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagt 1550  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||| ||||| |||||||||||||||||||    |||||||| |||||||||||||||||||| ||| ||||||| ||||| ||| || ||||||||    
T  1551 gtggtgagaaaggacacaagagtaatgtttgtggtaaagatgagaggaagtgcttcaggtgtggtcagaagggacacagtttagctgaatgcaagcgtgg 1650  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    ||||||| | |||||||||| ||| |  || ||||||||||    
T  1651 ggacattatctgctacaactgcaatggagagggtcatatca 1691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 242
Target Start/End: Complemental strand, 42151 - 41955
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | |||||||||||||||||||||||||  ||| |||||||| | |||||||||||| |||||||||||||||||||||||||   |||||||     
T  42151 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgat 42052  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||||| ||| | ||||||||||||||    
T  42051 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaactgcaatggggaaggtcatatca 41955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 12258 - 12506
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| ||||| |||||| |||| |||||||||||| ||||||||||||  |||||||||||||||||||    ||   | |  | ||| |||||||    
T  12258 aagccgtacagtgctcctgctgacaagggtaagcagagactgaatgatgagagtaggcccaagaggagagatgagggtaagtaga--gattgcttcaagt 12355  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || |||||||||||||||||||||| |     |||||||||||||||||| ||||||| || |||||||||||| |||| |||||||||||||||    
T  12356 gtggcgagaaaggccacaagagtaatgtttttcgtaaagatgagaagaagtgctttaggtgtgctcagaaaggacacacattagatgattgtaagcgtgg 12455  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtg 252  Q
    |||||||||||| || |||| ||| |||||||||||||||| |||| ||||    
T  12456 ggacattgtttgttataactgcaatgaggaaggtcatatcagttcgcagtg 12506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 2 - 252
Target Start/End: Original strand, 20438 - 20686
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| ||||| |||||| |||| |||||||||||| ||||||||||||  |||||||||||||||||||    ||   | |  | ||| |||||||    
T  20438 aagccgtacagtgctcctgctgacaagggtaagcagagactgaatgatgagagtaggcccaagaggagagatgagggtaagtaga--gattgcttcaagt 20535  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    |||| || |||||||||||||||||||||| |     |||||||||||||||||| ||||||| || |||||||||||| |||| |||||||||||||||    
T  20536 gtggcgagaaaggccacaagagtaatgtttttcgtaaagatgagaagaagtgctttaggtgtgctcagaaaggacacacattagatgattgtaagcgtgg 20635  T
Q  202 ggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtg 252  Q
    |||||||||||| || |||| ||| |||||||||||||||| |||| ||||    
T  20636 ggacattgtttgttataactgcaatgaggaaggtcatatcagttcgcagtg 20686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 42 - 261
Target Start/End: Complemental strand, 252039 - 251820
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgaga 141  Q
    |||||||||| | ||||||||||||||||||||||| |  ||| ||||| ||||||||||||||||||||||||||||| ||  ||| |||||   ||||    
T  252039 tgaatgatgataggaggcccaagaggagagatgctcttgttgagattgtgtgtttcaagtgtggtgaaaaaggccacaaaagctatgcttgtggtagaga 251940  T
Q  142 tgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatc 241  Q
    ||||| ||| || || |||||||||| ||||||||||||  ||| ||| ||||||||||| |||||||||||||| |||| |||||| ||||||||||||    
T  251939 tgagaggaaatgttttaggtgtggtcagaaaggacacacactagctgaatgtaagcgtggagacattgtttgctaaaactgcaacgaagaaggtcatatc 251840  T
Q  242 aattcgtagtgtacgcagcc 261  Q
    | |||  ||||||| |||||    
T  251839 agttcacagtgtactcagcc 251820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 229765 - 229827
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | || |||||||||||||| |||||||| |||||||||||||| |||||||||    
T  229765 gatgctcctgcggagattgtttgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 229827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 29984 - 29770
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    |||| |||||| |||||| |||| |||||||||||| |||||||||||| |||||| | ||||||||||||||||| ||| || || | |||||||||||    
T  29984 ccgtctagtgctcctgctgacaaaggtaagcagagactgaatgatgagaggaggcctaggaggagagatgctcctattgagatagtctatttcaagtgtg 29885  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    ||||||| ||||||||||||||||||||| |||  |||||||||||||| ||| |||||||   ||||||||||||  ||| ||| || |||||||| ||    
T  29884 gtgaaaagggccacaagagtaatgtttgtaaccatgatgagaagaagtgtttccggtgtgggacgaaaggacacacaatagctgagtgcaagcgtggtga 29785  T
Q  205 cattgtttgctacaa 219  Q
      |||||||||||||    
T  29784 tgttgtttgctacaa 29770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 958 - 798
Alignment:
Q  8 tatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtg 107  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||| | |||||||||      
T  958 tatagtgctcctgctgacaagggtaagcagagattgaatgatgagaggaggcctaagaggagagatgctcctgctgagattgtttgctacaagtgtggct 859  T
Q  108 aaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcg 168  Q
    | |||||||||||||||||||| |||||   |||||||||||||| |||||||||||||||    
T  858 agaaaggccacaagagtaatgtctgtgataaagatgagaagaagtacttcaggtgtggtcg 798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 8306 - 8577
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| || ||||||||  |||||||||||| ||| ||||||||||||||||||| |  ||||||||||||||  ||||    
T  8306 aagccgtatagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggagacccaagaggagagatgctcatgttgatattgtttgttataagt 8405  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgag-atgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtg 200  Q
    |||| || || ||||||||||||||||||||| ||  || ||||||||||||| ||||||||||||| ||| ||||||||| ||| |||||| |||||||    
T  8406 gtggcgagaatggccacaagagtaatgtttgt-actaaggatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtg 8504  T
Q  201 gggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    | ||| ||||||| || |||| ||| ||  | || ||||||| |||| |||| |  || || |||||||||||    
T  8505 gtgacgttgtttgttataactgcaatgaatagggccatatcagttcgcagtgcaatcaaccgaagaaggttag 8577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 273
Target Start/End: Original strand, 18520 - 18791
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| |||| || ||||||||  |||||||||||| ||| ||||||||||||||||||| |  ||||||||||||||  ||||    
T  18520 aagccgtatagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggagacccaagaggagagatgctcatgttgatattgtttgttataagt 18619  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgag-atgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtg 200  Q
    |||| || || ||||||||||||||||||||| ||  || ||||||||||||| ||||||||||||| ||| ||||||||| ||| |||||| |||||||    
T  18620 gtggcgagaatggccacaagagtaatgtttgt-actaaggatgagaagaagtgtttcaggtgtggtcagaagggacacactctagctgattgcaagcgtg 18718  T
Q  201 gggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    | ||| ||||||| || |||| ||| ||  | || ||||||| |||| |||| |  || || |||||||||||    
T  18719 gtgacgttgtttgttataactgcaatgaatagggccatatcagttcgcagtgcaatcaaccgaagaaggttag 18791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 42 - 269
Target Start/End: Original strand, 30210 - 30437
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgaga 141  Q
    |||||||||| | |||||||||||||| |||||||||| |||| ||||||||||  |||||||||||||||||||||||||| |||| |||||   ||||    
T  30210 tgaatgatgacaggaggcccaagaggaaagatgctcctgctgagattgtttgttataagtgtggtgaaaaaggccacaagagcaatgcttgtggtagaga 30309  T
Q  142 tgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatc 241  Q
    | ||| ||| || || |||||||||  |||||||||||   ||| ||| ||||||  |||||||||||| |||||||||| ||| || ||||||||||||    
T  30310 taagaggaaatgttttaggtgtggtaagaaaggacacaaactagctgaatgtaagaatggggacattgtatgctacaactgcaaagaagaaggtcatatc 30409  T
Q  242 aattcgtagtgtacgcagcctaagaagg 269  Q
    | |||| ||||||| ||||| |||||||    
T  30410 agttcgaagtgtactcagccgaagaagg 30437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 263686 - 263521
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| |||||||||||| |||| |||||||||||| |||||||||||| |||||||   ||||||||||||||| |||| || |||||||| ||||    
T  263686 aagccgtacagtgcccctgctgacaagggtaagcagagactgaatgatgagaggaggcccgttaggagagatgctcctgctgagatagtttgttttaagt 263587  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtc 167  Q
    |||| || |||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  263586 gtggcgagaaaggccacaagagtaatgtttgt-accaaggatgagaagaagtgcttcaggtgtggtc 263521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 54508 - 54267
Alignment:
Q  1 aaagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaag 100  Q
    ||||||||||||||| |||||| |||| || |||||||| ||||||||||||| ||||||||| ||  || |||||| | |||| || ||||||| ||||    
T  54508 aaagccgtatagtgctcctgctgacaaagggaagcagaggttgaatgatgagaggaggcccaatagatgaaatgctcttgctgagatcgtttgttacaag 54409  T
Q  101 tgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtg 200  Q
    ||||| || ||||||||||||||||||||||||     ||||||||||||||| ||||||||||||| ||| ||||||||| ||| | |||| |||||||    
T  54408 tgtggcgagaaaggccacaagagtaatgtttgtactaaagatgagaagaagtgtttcaggtgtggtcagaagggacacactctagcttattgcaagcgtg 54309  T
Q  201 gggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | ||  ||||||| || |||| ||| || || ||||||||||    
T  54308 gtgatgttgtttgttataactgcaatgaagagggtcatatca 54267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 46 - 242
Target Start/End: Original strand, 23811 - 24007
Alignment:
Q  46 tgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgag 145  Q
    |||||| | |||||||||||||||||||||||||  ||| |||||||| | |||||||||||| |||||||||||||||||||| ||||   |||||||     
T  23811 tgatgataggaggcccaagaggagagatgctcctgttgagattgtttgatacaagtgtggtgagaaaggccacaagagtaatgtatgtggaagagatgat 23910  T
Q  146 aagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | |||||||||||||||||||| ||| || |||| ||||| ||| || ||||||||||||||||| || ||||| | ||| | ||||||||||||||    
T  23911 aggaagtgcttcaggtgtggtcagaagggtcacagtttagctgaatgcaagcgtggggacattgtctgttacaattgcaatggggaaggtcatatca 24007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 42 - 242
Target Start/End: Original strand, 514237 - 514437
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgaga 141  Q
    |||||||||| | |||||| |||||||||||||||||| |||| |||||||||| |||||||||||| |||||||||||||| ||||||||||    |||    
T  514237 tgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtgtggtgagaaaggccacaagagcaatgtttgtggtaaaga 514336  T
Q  142 tgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatc 241  Q
     |||| |||||||||||||||||||| ||| |||||||  |||  ||| |||||| ||||||||||||| |||||||||| ||| |  || |||||||||    
T  514337 cgagaggaagtgcttcaggtgtggtcagaagggacacagcttaactgaatgtaagtgtggggacattgtctgctacaactgcaatggagagggtcatatc 514436  T
Q  242 a 242  Q
    |    
T  514437 a 514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 42 - 221
Target Start/End: Original strand, 687 - 866
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgaga 141  Q
    |||||||||| | |||||| |||||||||||||||||| |||| |||||||||| ||||| |||||| |||||||||||||| ||||||||||    |||    
T  687 tgaatgatgataggaggcctaagaggagagatgctccttctgagattgtttgttacaagtttggtgagaaaggccacaagagcaatgtttgtggtaaaga 786  T
Q  142 tgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaact 221  Q
     |||| ||||||||||||||||||||  || ||||||| ||||| ||| |||||||||||||||||||| ||||| ||||    
T  787 cgagaggaagtgcttcaggtgtggtcaaaagggacacagtttagctgaatgtaagcgtggggacattgtctgctataact 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 273
Target Start/End: Complemental strand, 22573 - 22311
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    |||||||||||  |||| || || || ||| |||||||||||| ||||||||| |||||||||||||||  ||| || ||||||| ||||||||| || |    
T  22573 agtgcccctgccgacaaaggaaatcaaagactgaatgatgagaggaggcccaataggagagatgctcctgttgagatcgtttgttacaagtgtggcgaga 22474  T
Q  111 aaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattg 209  Q
    ||||||||||||||||||||| | ||  | ||||||||||| ||||||| |||||||| ||||||||||||  |||||||||| |||||||| ||  |||    
T  22473 aaggccacaagagtaatgttt-ttactaaggatgagaagaaatgcttcaagtgtggtcagaaaggacacaccctagttgattgcaagcgtggtgatgttg 22375  T
Q  210 tttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||||| |||| ||| || || || ||||||| |||  |||| || ||||| |||||||||||    
T  22374 tttgctataactgcaatgaagagggccatatcagttctcagtgcacacagccgaagaaggttag 22311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 87; Significance: 9e-42; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 203841 - 203676
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| |||||||||||| |||| |||||||||||| |||||||||||| |||||||   |||||||||||||||  ||| || |||||||| ||||    
T  203841 aagccgtacagtgcccctgctgacaagggtaagcagagactgaatgatgagaggaggcccgttaggagagatgctcctggtgagatagtttgttttaagt 203742  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtc 167  Q
    |||| || |||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  203741 gtggcgagaaaggccacaagagtaatgtttgt-accaaggatgagaagaagtgcttcaggtgtggtc 203676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 424697 - 424637
Alignment:
Q  73 tgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||||||| ||||| || ||||| |||||||  ||||||||||| || |||||||||    
T  424697 tgctcctactgagattgtgtgcttcaactgtggtgtgaaaggccacaaaagcaatgtttgt 424637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 68 - 273
Target Start/End: Original strand, 764 - 969
Alignment:
Q  68 agagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtc 167  Q
    |||||||||||| |||| |||||||||| |||||||||  | |||||||| |||||||||||||||     |||||||||||||||||||||||||||||    
T  764 agagatgctcctgctgagattgtttgttacaagtgtggcaagaaaggccataagagtaatgtttgtactaaagatgagaagaagtgcttcaggtgtggtc 863  T
Q  168 ggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaa 267  Q
     ||||||||||||| ||| |||||| |||||||| || |||||||| || |||| ||| || || |||||||||| |||  |||||||||| || | |||    
T  864 agaaaggacacactctagctgattgcaagcgtggtgatattgtttgttataactgcaatgaagagggtcatatcagttcacagtgtacgcaaccgaggaa 963  T
Q  268 ggttag 273  Q
    ||||||    
T  964 ggttag 969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 213
Target Start/End: Complemental strand, 6059 - 5851
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||||||||| |||||| |||| || || ||||   |||||||||||| |||||| | |||||||||||| |||| ||| | ||| | |||||||||||    
T  6059 ccgtatagtgctcctgctgacaaaggaaaacagatgctgaatgatgagaggaggcctaggaggagagatgcccctaatgagactgtctatttcaagtgtg 5960  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    |||| |||||||||||||||||||| |||||  ||||| |||||||||| ||||| ||||| | |||||||||||| |||| |||||| |||||||||||    
T  5959 gtgagaaaggccacaagagtaatgtgtgtgattgagataagaagaagtgtttcagatgtggacagaaaggacacacattagctgattgcaagcgtgggga 5860  T
Q  205 cattgtttg 213  Q
      |||||||    
T  5859 tgttgtttg 5851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 6101 - 6315
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| |||||||||||| |||| |||||||| ||| |||||||||||| |||||| || |||||||||||||||   || || |||||||| ||||    
T  6101 aagccgtacagtgcccctgctgacaagggtaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctgtcgagatagtttgttttaagt 6200  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtg 200  Q
    |||| || ||||||||||||||||| |||||| ||| | |||||||||||||||||||||||||||| ||| || |||    ||| ||||||||||||||    
T  6201 gtggcgagaaaggccacaagagtaacgtttgt-accaaggatgagaagaagtgcttcaggtgtggtcagaagggtcacgtgctagctgattgtaagcgtg 6299  T
Q  201 gggacattgtttgcta 216  Q
    | || ||||| |||||    
T  6300 gcgatattgtatgcta 6315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 53276 - 53466
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    |||||||||||| |||| || |||||||||||||||||||||| ||||||||| ||||||||||||| | |||  || ||||||| ||||||||| || |    
T  53276 agtgcccctgctgacaagggaaagcagagattgaatgatgagaggaggcccaataggagagatgctcttgctgggatcgtttgttacaagtgtggcgaga 53375  T
Q  111 aaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgg 201  Q
    ||||||||||||||||||||||| ||  | ||||||||||| || |||||||||||||  ||||||||||   |||||||||| ||||||||    
T  53376 aaggccacaagagtaatgtttgt-actaaggatgagaagaaatgattcaggtgtggtcaaaaaggacacatcctagttgattgcaagcgtgg 53466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 389 - 567
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| ||| |||||||| |||| || |||||  |  ||||||||||||  || |||||||||||||||||||||||||| || ||||| || ||||    
T  389 aagccgtacagtccccctgctgacaagggaaagcaacggctgaatgatgagagaagacccaagaggagagatgctcctactgagatagtttgctttaagt 488  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacac 180  Q
    |||| || ||||||||||| ||||||||||||  |  ||||||||||||||||||||||||||||| ||||||||||||    
T  489 gtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacac 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 15532 - 15292
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||||||||| |||||| ||||  | |||||||| || |||||||||| ||||||||| ||||||||||||||| |||| ||| | || |  ||||    
T  15532 aagccgtatagtgctcctgctgacaagcgaaagcagaggttaaatgatgagaggaggcccaataggagagatgctcctgctgagattttctgctataagt 15433  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtg 200  Q
    |||| || |||||||||||||||||||||||| ||  | || ||||||||||||||||||||||||| |||| |||||||| ||| |||||| |||||||    
T  15432 gtggcgagaaaggccacaagagtaatgtttgt-actaaggacgagaagaagtgcttcaggtgtggtcagaaatgacacactctagctgattgcaagcgtg 15334  T
Q  201 gggacattgtttgctacaacttcaacgaggaaggtcatatca 242  Q
    | ||  ||||||| || |||| ||| || || || |||||||    
T  15333 gtgatgttgtttgttataactgcaatgaagagggccatatca 15292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 105
Target Start/End: Complemental strand, 3325 - 3222
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||    
T  3325 aagccgtatagtgcccctgctgacaagggtaagcagagattgaatgatgagaggaggcccaagaggagagatgctcctactgagattatttgcttcaagt 3226  T
Q  102 gtgg 105  Q
    ||||    
T  3225 gtgg 3222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 1692 - 1870
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| |||||||||||| |||| || |||||  || ||||||||||||  ||||||||||||||||||||| || |||| ||  |||| |  ||||    
T  1692 aagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagagaaggcccaagaggagagatgctactgctgaaataatttgctataagt 1791  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacac 180  Q
    |||| || ||||||||||| ||||||||||||  |  ||||||||||||||||||||||||||||| ||||||||||||    
T  1792 gtggcgagaaaggccacaaaagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggtcagaaaggacacac 1870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 66992 - 67190
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgaga 141  Q
    |||||||||| | ||| ||||||||||||||||||||| | || ||||||||||  |||||||||||||||||||||||||| ||||||||||   || |    
T  66992 tgaatgatgataggagacccaagaggagagatgctccttccgagattgtttgttataagtgtggtgaaaaaggccacaagagcaatgtttgtggtagaca 67091  T
Q  142 tgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatat 240  Q
    ||||| ||| || |||||||||||||  || |||||||   ||| ||| ||||||| |||||||||||| |||||||||| ||| |  |||||||||||    
T  67092 tgagaggaaatgtttcaggtgtggtcaaaagggacacaacctagctgaatgtaagcttggggacattgtctgctacaactgcaatggagaaggtcatat 67190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 9631 - 9795
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    |||||||| |||||||||||| | || ||||||| |||| | |||||||||| |||||||   ||||||||||||||| |||| || |||||||| ||||    
T  9631 aagccgtacagtgcccctgctgataagggtaagctgagacttaatgatgagaggaggcccgttaggagagatgctcctgctgagatagtttgttttaagt 9730  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggt 166  Q
    |||| || |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  9731 gtggcgagaaaggccacaagagtaatgtttgt-accaaggatgagaagaagtgcttcaggtgtggt 9795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 4696 - 4964
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||| |||||||||  | |||| || ||||| ||| |||||||||||| |||||| || ||||||||||||||| |||| || || ||||  |||||||    
T  4696 ccgtacagtgccccttttgacaagggaaagcaaagactgaatgatgagaggaggccaaataggagagatgctcctgctgagatagtctgttataagtgtg 4795  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggga 204  Q
    |  | ||||||||||||||||||||||||  |  ||||||||||||||||||||||||||| | ||| || ||||  |||| |||||| |||||||| ||    
T  4796 gccagaaaggccacaagagtaatgtttgtaccaaagatgagaagaagtgcttcaggtgtggacagaagggtcacatgttagctgattgcaagcgtggtga 4895  T
Q  205 cattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
      |||| || || |||| ||||||||| || ||||||| | |  ||||||| ||||| | |||||||||    
T  4896 tgttgtatgttataactgcaacgaggagggccatatcagtactcagtgtacacagccgaggaaggttag 4964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 273
Target Start/End: Original strand, 17331 - 17599
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||| |||||||||||| |||| || || || ||| |||||||||||| |||||| || ||||||||||||||| |||| || |||||||  |||||||    
T  17331 ccgtacagtgcccctgctgacaagggaaaacaaagactgaatgatgagaggaggccgaataggagagatgctcctgctgagatagtttgttataagtgtg 17430  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccga-gatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtgggg 203  Q
    | || |||||||||||||||||||||||| ||| | ||||||||||||||||| ||||||| ||  || || ||||| ||||  ||||  | |||||| |    
T  17431 gcgagaaaggccacaagagtaatgtttgt-accaaggatgagaagaagtgctttaggtgtgatcaaaagggtcacacattagcggattacatgcgtggtg 17529  T
Q  204 acattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    |  |||| || ||||| | |||||| || || ||||||| | |  ||||||| ||||| |||||||||||    
T  17530 atgttgtatgttacaattgcaacgaagagggccatatcagtactcagtgtacacagccgaagaaggttag 17599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 1148 - 1305
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| || ||||| |||||| |||| || |||||||   |||||||||| | ||| ||||||||||||||||||||| |||| |||||||||| |||||    
T  1148 aagccttacagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggagacccaagaggagagatgctcctgctgagattgtttgttacaagt 1247  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcag 159  Q
    ||||||| |||||||||||||| ||||||||||   ||||||||| ||||||||||||    
T  1248 gtggtgagaaaggccacaagagcaatgtttgtggtagagatgagaggaagtgcttcag 1305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 166
Target Start/End: Complemental strand, 40515 - 40354
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtg 104  Q
    ||||| |||||||||||| |||| || ||||| ||| |||||||||||| |||||| || ||||||||||||||| |||| || || ||||  |||||||    
T  40515 ccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggccgaataggagagatgctcctgctgagatagtctgttataagtgtg 40416  T
Q  105 gtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggt 166  Q
    | || ||||||||||||||||||||||||  |  |||||| |||||||||||||||||||||    
T  40415 gcgagaaaggccacaagagtaatgtttgtaccaaagatgataagaagtgcttcaggtgtggt 40354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 121 - 271
Target Start/End: Complemental strand, 12301 - 12151
Alignment:
Q  121 gagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaac 220  Q
    ||||||||| ||||||||||||||||||||||| ||||| ||||| | |||||||||||| || | |||||| ||| ||||||| |||||||||||||||    
T  12301 gagtaatgtatgtgaccgagatgagaagaagtgtttcagatgtggacagaaaggacacacattggctgattgcaagtgtggggatattgtttgctacaac 12202  T
Q  221 ttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggtt 271  Q
    |  || || ||||| ||||| | |||  |||||||||||||||||||||||    
T  12201 tgtaatgaagaaggacatattagttcacagtgtacgcagcctaagaaggtt 12151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 12400 - 12322
Alignment:
Q  6 cgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactga 84  Q
    |||||||||| |||||| |||| | ||| |||||  |||||||||||| ||||||  ||||||||||||||||||||||    
T  12400 cgtatagtgctcctgctgacaaagataaacagaggctgaatgatgagaggaggccttagaggagagatgctcctactga 12322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 33225 - 33337
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    ||||| |||||| |||| || || |||||  |||||||||||| |||||||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  33225 agtgctcctgctgacaaaggaaaacagaggatgaatgatgagaggaggcccaagaggagagatgctcctgttgaaattgtttgtttcaagtgtggtgaaa 33324  T
Q  111 aaggccacaagag 123  Q
    |||||||||||||    
T  33325 aaggccacaagag 33337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 273
Target Start/End: Complemental strand, 30310 - 30123
Alignment:
Q  86 attgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttag 185  Q
    |||||||||| |||||||||||| ||||||||||| || || |||||||   ||||||||| |||||| ||||||||||||| |||| ||||||   |||    
T  30310 attgtttgttacaagtgtggtgagaaaggccacaaaagcaacgtttgtggtagagatgagaggaagtgattcaggtgtggtcagaaaagacacaacctag 30211  T
Q  186 ttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
     ||| |||||||||||||||||||| || ||||||| ||| |  || |||||||||| |||| ||||| |  |||| |||||||||||    
T  30210 ctgaatgtaagcgtggggacattgtctgttacaactgcaatggagagggtcatatcagttcgcagtgtcctgagccgaagaaggttag 30123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 86 - 221
Target Start/End: Complemental strand, 12173 - 12038
Alignment:
Q  86 attgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaagaagtgcttcaggtgtggtcggaaaggacacactttag 185  Q
    |||||||| | |||||||||||| |||||||||||||||||||||||||   ||||||| | |||||||||||||||||||| ||| || |||| |||||    
T  12173 attgtttgctacaagtgtggtgagaaaggccacaagagtaatgtttgtggaagagatgataggaagtgcttcaggtgtggtcagaagggtcacagtttag 12074  T
Q  186 ttgattgtaagcgtggggacattgtttgctacaact 221  Q
     ||| || ||||||||||||||| | || |||||||    
T  12073 ctgaatgcaagcgtggggacattatctgttacaact 12038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 1368 - 1244
Alignment:
Q  33 agcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttg 132  Q
    ||||||||||||||||||||| ||| || ||||| || |||| ||||||||| |||||||||| |||||||||||| || ||||||||||||||||||||    
T  1368 agcagagattgaatgatgagaggagacctaagagaagggatgttcctactgagattgtttgttacaagtgtggtgagaagggccacaagagtaatgtttg 1269  T
Q  133 tgaccgagatgagaagaagtgcttc 157  Q
      |  | || |||||||||||||||    
T  1268 caatggtgaggagaagaagtgcttc 1244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 7986 - 7911
Alignment:
Q  33 agcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtga 108  Q
    ||||||||||||||||||||| ||| || ||||| || |||| ||||||||| |||||||||| ||||||||||||    
T  7986 agcagagattgaatgatgagaggagacctaagagaagggatgttcctactgagattgtttgttacaagtgtggtga 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 273
Target Start/End: Complemental strand, 115982 - 115751
Alignment:
Q  42 tgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgaga 141  Q
    ||||||||||||  ||||||||| | |||||  ||||| |||| || ||||| || |||||||| || ||||||||||| ||||||||||||  |  |||    
T  115982 tgaatgatgagagaaggcccaagggaagagacactcctgctgaaatagtttgctttaagtgtggcgagaaaggccacaaaagtaatgtttgtaccaaaga 115883  T
Q  142 tgagaagaagtgcttcaggtgtggtcggaaaggacacactttagttgattgtaagcgtggggacattgtttgctacaacttcaacgaggaaggtcatatc 241  Q
    |||||||||||||||||||||||| | ||| || |||   |||| |||||| |||||||| || || || ||||| || | ||| | ||| |||||||||    
T  115882 tgagaagaagtgcttcaggtgtggacagaagggtcacgtgttagctgattgcaagcgtggtgatatagtatgctataattgcaatggggagggtcatatc 115783  T
Q  242 aattcgtagtgtacgcagcctaagaaggttag 273  Q
    | |||  |||| || || || |||||||||||    
T  115782 agttctcagtgcactcaaccgaagaaggttag 115751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 3999 - 4080
Alignment:
Q  68 agagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccgagatgagaaga 149  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||| ||  ||||||||||||| |||||||| ||||||||||    
T  3999 agagatgctcctactgagattgtctgtttcaagtttggtgaaaagggaaacaagagtaatgtatgtgaccgtgatgagaaga 4080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 707 - 775
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagat 73  Q
    ||||| ||||| |||||| |||| |||||  ||||| |||||||||||| |||||| ||||||||||||    
T  707 ccgtacagtgctcctgctgacaaaggtaaatagagactgaatgatgagaggaggcctaagaggagagat 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 156
Target Start/End: Original strand, 30895 - 31011
Alignment:
Q  40 attgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgtgaccga 139  Q
    |||||||||||||| |||  | ||||| ||||||| |||| |||| |||||||| | |||||||||||| || |||||||||||||||| |||  |  |     
T  30895 attgaatgatgagaggagaactaagagaagagatgttcctgctgagattgtttgctacaagtgtggtgagaagggccacaagagtaatgcttgcaatggt 30994  T
Q  140 gatgagaagaagtgctt 156  Q
    |||||||||||||||||    
T  30995 gatgagaagaagtgctt 31011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 3736 - 3863
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||||| |||| || || || |||||||||||||||| ||| || ||||||||||||| | ||  ||| |||||||| | |||||    
T  3736 aagccctatagtgctcctgctgacaaggggaaacaaagattgaatgatgagaggagacctaagaggagagatgtttctgttgagattgtttgctacaagt 3835  T
Q  102 gtggtgaaaaaggccacaagagtaatgt 129  Q
    |||| || |  |||||||||||||||||    
T  3836 gtggcgagaggggccacaagagtaatgt 3863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 7704 - 7754
Alignment:
Q  83 gatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||||||||||| ||||| |  ||||||||||||||||||||||||    
T  7704 gatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 7754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 36245 - 36161
Alignment:
Q  45 atgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgt 129  Q
    ||||||||| ||| || ||||| |||||||| |||||| | |||||||| | || ||||||||| ||||||||||||||||||||    
T  36245 atgatgagaggagacctaagagaagagatgcccctactaagattgtttgctacaggtgtggtgagaaaggccacaagagtaatgt 36161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 16452 - 16584
Alignment:
Q  1 aaagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaag 100  Q
    |||||| |||||||| |||||| | || |||||||| ||  |||||||||||| |||||| |  | || |||| ||||| ||||  ||||||| | ||||    
T  16452 aaagccttatagtgctcctgctgataaaggtaagcaaagggtgaatgatgagaggaggcctagaaagaaagatactcctgctgaggttgtttgctacaag 16551  T
Q  101 tgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||| || |||||||||||||||| ||||    
T  16552 tgtggtgagaagggccacaagagtaatgcttgt 16584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 393 - 455
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||||| || |||||||||||||| ||||| || |||||||||||||| |||||||||    
T  393 gatgctcctacggagattgtttgtttcaattgtggcgagaaaggccacaagagcaatgtttgt 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 159
Target Start/End: Complemental strand, 1721 - 1583
Alignment:
Q  21 ctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaa 120  Q
    ||||||| || || || |||||||||||||||| |  ||| ||| ||||| ||||||||  |||| ||||||||| ||| |||||||  || ||||||||    
T  1721 ctaacaaaggcaaacaaagattgaatgatgagaggcagcctaaggggagaaatgctcctgttgatgttgtttgttacaaatgtggtgttaagggccacaa 1622  T
Q  121 gagtaatgtttgtgaccgagatgagaagaagtgcttcag 159  Q
    |||||||| |||   || |||||||||||| || |||||    
T  1621 gagtaatgcttgcacccaagatgagaagaaatgtttcag 1583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 10071 - 10133
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||||| || ||||| |||||||| |||||||| |||||||||||||| |||||||||    
T  10071 gatgctcctacggagattgtctgtttcaattgtggtgagaaaggccacaagagcaatgtttgt 10133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 270 - 208
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | ||||||||||||||||| ||||| |  ||||||||||||||||||||||||    
T  270 gatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 13037 - 13099
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | ||||||||||||||||| ||||| |  ||||||||||||||||||||||||    
T  13037 gatgctcctgcggatattgtttgtttcaactgtggcgggaaaggccacaagagtaatgtttgt 13099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 17551 - 17489
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | || ||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  17551 gatgctcctgcggagattgtctgtttcaattgtggtgagaaaggccacaagagtaatgtttgt 17489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 613 - 744
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || || |||||| ||   ||||| | | |||| |||| ||| ||||||||  |||| |||  ||||||||| |    
T  613 aagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagagggatgctccagctgagattacttgtttcaatt 712  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||| |||| |||||||||||||||||||    
T  713 gtggtgagaaagaccacaagagtaatgtttgt 744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 248 - 117
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || || |||||| ||   ||||| | | |||| |||| ||  ||||||||| | || ||||| |||||||| |    
T  248 aagccctatagtgcccctgctgataagggaaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcagagattgtctgtttcaatt 149  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||| |||||||||||||| |||||||||    
T  148 gtggtgagaaaggccacaagagcaatgtttgt 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 9195 - 9326
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| |||||||| |||||| | || ||||| || |||||||||||||||| |||||| |  | || |||| || ||||||| |||||||| |  |  |    
T  9195 aagccttatagtgctcctgctgataagggtaaacaaagattgaatgatgagaggaggcctagaaagaaagatactactactgagattgtttgctatactt 9294  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||| || |||||||||||||||| ||||    
T  9295 gtggtgagaagggccacaagagtaatgcttgt 9326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 2288 - 2198
Alignment:
Q  5 ccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtt 95  Q
    ||||| ||||||||| || |||| || ||||| || ||||||||||||| |||||  || ||||||||||||||| |||| || |||||||    
T  2288 ccgtacagtgcccctactgacaaaggaaagcaaaggttgaatgatgagaggaggcggaataggagagatgctcctgctgagatagtttgtt 2198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 13327 - 13449
Alignment:
Q  11 agtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtggtgaaa 110  Q
    ||||| |||||| | || |||||||| |||||||||||||||| |||||| |  | || ||||| |  |||||| |||||||| | ||  |||||||| |    
T  13327 agtgctcctgctgataagggtaagcaaagattgaatgatgagaggaggcctagaaagaaagatgttgttactgagattgtttgctacacttgtggtgaga 13426  T
Q  111 aaggccacaagagtaatgtttgt 133  Q
    ||||||| |||||||||| ||||    
T  13427 aaggccataagagtaatgcttgt 13449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 11269 - 11331
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||||| || ||||| ||||| || |||||||| |||||||||||||| |||||||||    
T  11269 gatgctcctacggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 11331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 14954 - 15016
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||||| || ||||| ||||| || |||||||| |||||||||||||| |||||||||    
T  14954 gatgctcctacggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 15016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 10152 - 10214
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | ||||||||||||||||| | ||| |  ||||||||||||||||||||||||    
T  10152 gatgctcctgcggatattgtttgtttcaactatggcgggaaaggccacaagagtaatgtttgt 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 12807 - 12869
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | ||||||||||||||||| | ||| |  ||||||||||||||||||||||||    
T  12807 gatgctcctgcggatattgtttgtttcaactatggcgggaaaggccacaagagtaatgtttgt 12869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 12214 - 12162
Alignment:
Q  76 tcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatg 128  Q
    ||||||||| |||||||| | |||||||||||| || ||||||||||||||||    
T  12214 tcctactgagattgtttgctacaagtgtggtgagaagggccacaagagtaatg 12162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 7334 - 7202
Alignment:
Q  1 aaagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaag 100  Q
    |||||| || ||||| |||||| | || |||||||| ||| |||||||||||| |||||| |  | || ||||||||||  ||| |||||||| |  |      
T  7334 aaagccttacagtgctcctgctgataagggtaagcaaagaatgaatgatgagaggaggcctagaaagaaagatgctcctgttgagattgtttgctatact 7235  T
Q  101 tgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||| |||||||| |||||||||| ||||    
T  7234 tgtggtgagaaaggccataagagtaatgcttgt 7202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 14464 - 14332
Alignment:
Q  1 aaagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaag 100  Q
    |||||| || ||||| |||||| | || |||||||| ||| |||||||||||| |||||| |  | || ||||||||||  ||| |||||||| |  |      
T  14464 aaagccttacagtgctcctgctgataagggtaagcaaagaatgaatgatgagaggaggcctagaaagaaagatgctcctgttgagattgtttgctatact 14365  T
Q  101 tgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||| |||||||| |||||||||| ||||    
T  14364 tgtggtgagaaaggccataagagtaatgcttgt 14332  T

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Target: scaffold0819 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 131
Target Start/End: Complemental strand, 504 - 445
Alignment:
Q  72 atgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgttt 131  Q
    |||||||| |||| ||||| ||||| || |||||||| |||||||||||||| |||||||    
T  504 atgctcctgctgagattgtctgttttaattgtggtgagaaaggccacaagagcaatgttt 445  T

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Target: scaffold0079 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 133
Target Start/End: Complemental strand, 36958 - 36827
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || || |||||| ||   ||||| | | |||| |||| ||  ||||||||| | || || || |||||||| |    
T  36958 aagccctatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcggagatcgtctgtttcaatt 36859  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||| |||||||||||||| |||||||||    
T  36858 gtggtgagaaaggccacaagagcaatgtttgt 36827  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 133
Target Start/End: Original strand, 139454 - 139585
Alignment:
Q  2 aagccgtatagtgcccctgctaacaatggtaagcagagattgaatgatgagaagaggcccaagaggagagatgctcctactgatattgtttgtttcaagt 101  Q
    ||||| ||||||||||||||| | || || || |||||| ||   ||||| | | |||| |||| ||| ||| ||||  |||| |||  ||| ||||| |    
T  139454 aagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagagggatactccagctgagattacttgcttcaatt 139553  T
Q  102 gtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||| ||||||||||||||||||||||||    
T  139554 gtggtgagaaaggccacaagagtaatgtttgt 139585  T

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Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 217 - 179
Alignment:
Q  95 ttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  217 ttcaattgtggtgagaaaggccacaagagtaatgtttgt 179  T

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Target: scaffold0451 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 13945 - 14007
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | || ||||| ||||| || |||||||| |||||||||||||| |||||||||    
T  13945 gatgctcctgcggagattgtctgttttaattgtggtgagaaaggccacaagagcaatgtttgt 14007  T

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Target: scaffold0285 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 5389 - 5327
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||||||| | || |||||||||||||| ||||| || || ||||| |||||||||||||||    
T  5389 gatgctcctgcggagattgtttgtttcaactgtggcgagaagggccataagagtaatgtttgt 5327  T

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Target: scaffold0273 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 431 - 369
Alignment:
Q  71 gatgctcctactgatattgtttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||| |||| |||| ||||||||||| || |||||||| |||||||||||||| |||| ||||    
T  431 gatgttcctgctgagattgtttgttttaattgtggtgagaaaggccacaagagcaatgcttgt 369  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 171489 - 171447
Alignment:
Q  91 ttgtttcaagtgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    ||||| ||| |||||||| ||||||||||||||||||||||||    
T  171489 ttgttacaattgtggtgagaaaggccacaagagtaatgtttgt 171447  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 19023 - 19084
Alignment:
Q  212 tgctacaacttcaacgaggaaggtcatatcaattcgtagtgtacgcagcctaagaaggttag 273  Q
    ||||| |||| ||| |||||||||||||||| |||| ||||||| || || |||||||||||    
T  19023 tgctataactgcaatgaggaaggtcatatcagttcgcagtgtacacaaccgaagaaggttag 19084  T

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Target: scaffold0357 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 17920 - 17952
Alignment:
Q  101 tgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||| ||||||||||||||||||||||||    
T  17920 tgtggtgagaaaggccacaagagtaatgtttgt 17952  T

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Target: scaffold0207 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 4498 - 4530
Alignment:
Q  101 tgtggtgaaaaaggccacaagagtaatgtttgt 133  Q
    |||||||||||||||||||||||||||| ||||    
T  4498 tgtggtgaaaaaggccacaagagtaatgcttgt 4530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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