View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7790_high_6 (Length: 435)

Name: NF7790_high_6
Description: NF7790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7790_high_6
NF7790_high_6
[»] chr2 (10 HSPs)
chr2 (242-418)||(1020122-1020299)
chr2 (13-129)||(1021535-1021651)
chr2 (142-225)||(28365541-28365624)
chr2 (136-222)||(2986718-2986806)
chr2 (136-178)||(36464350-36464392)
chr2 (136-222)||(11175939-11176027)
chr2 (142-234)||(26829279-26829369)
chr2 (136-172)||(1020474-1020510)
chr2 (136-168)||(4587949-4587981)
chr2 (136-225)||(38716223-38716313)
[»] chr3 (17 HSPs)
chr3 (242-418)||(8315395-8315574)
chr3 (13-107)||(8313744-8313835)
chr3 (159-237)||(8313839-8313917)
chr3 (142-237)||(23320384-23320475)
chr3 (136-209)||(32314966-32315039)
chr3 (140-175)||(4775931-4775966)
chr3 (136-178)||(26127090-26127132)
chr3 (136-178)||(26177140-26177182)
chr3 (136-222)||(26628209-26628297)
chr3 (142-178)||(3780957-3780993)
chr3 (144-225)||(4521983-4522066)
chr3 (136-168)||(20001797-20001829)
chr3 (136-168)||(23428803-23428835)
chr3 (142-178)||(26633548-26633584)
chr3 (136-168)||(28173913-28173945)
chr3 (138-178)||(40836365-40836405)
chr3 (142-178)||(49657970-49658006)
[»] chr5 (10 HSPs)
chr5 (136-225)||(41663708-41663797)
chr5 (141-234)||(23040229-23040320)
chr5 (136-175)||(35302099-35302138)
chr5 (142-225)||(17825687-17825769)
chr5 (136-225)||(18695033-18695123)
chr5 (142-225)||(20653849-20653934)
chr5 (136-225)||(23765574-23765664)
chr5 (136-225)||(23815422-23815512)
chr5 (136-222)||(8645829-8645917)
chr5 (136-168)||(25557059-25557091)
[»] chr4 (11 HSPs)
chr4 (136-237)||(51291354-51291455)
chr4 (142-237)||(36729247-36729342)
chr4 (136-222)||(25011767-25011855)
chr4 (136-225)||(35475320-35475409)
chr4 (132-168)||(27018302-27018338)
chr4 (126-168)||(4433357-4433399)
chr4 (143-237)||(20919523-20919615)
chr4 (126-222)||(5304521-5304617)
chr4 (136-222)||(43793815-43793902)
chr4 (142-235)||(55780406-55780501)
chr4 (142-235)||(55844586-55844681)
[»] chr1 (10 HSPs)
chr1 (136-237)||(4455227-4455331)
chr1 (136-237)||(21147994-21148098)
chr1 (136-235)||(46432400-46432501)
chr1 (136-222)||(24196293-24196381)
chr1 (126-178)||(47685179-47685231)
chr1 (143-234)||(21185228-21185318)
chr1 (142-234)||(2260569-2260658)
chr1 (136-222)||(28920835-28920923)
chr1 (143-225)||(43706844-43706928)
chr1 (136-168)||(16551828-16551860)
[»] chr6 (7 HSPs)
chr6 (136-225)||(18791387-18791477)
chr6 (136-235)||(22968338-22968438)
chr6 (136-235)||(23819955-23820055)
chr6 (138-175)||(4013853-4013890)
chr6 (140-237)||(26239974-26240071)
chr6 (136-168)||(2059006-2059038)
chr6 (136-168)||(3118767-3118799)
[»] chr8 (4 HSPs)
chr8 (136-222)||(44147004-44147091)
chr8 (136-222)||(7117299-7117385)
chr8 (142-178)||(1824683-1824719)
chr8 (142-178)||(1859128-1859164)
[»] scaffold0291 (1 HSPs)
scaffold0291 (143-236)||(9941-10034)
[»] scaffold0267 (1 HSPs)
scaffold0267 (136-178)||(3752-3794)
[»] scaffold0002 (1 HSPs)
scaffold0002 (136-225)||(454958-455050)
[»] chr7 (8 HSPs)
chr7 (144-225)||(39181966-39182047)
chr7 (136-225)||(20636648-20636739)
chr7 (136-225)||(20638520-20638611)
chr7 (142-177)||(6650620-6650655)
chr7 (136-225)||(15681624-15681717)
chr7 (136-178)||(24464653-24464695)
chr7 (142-187)||(19493388-19493433)
chr7 (136-168)||(18754450-18754482)
[»] scaffold1202 (1 HSPs)
scaffold1202 (136-168)||(1958-1990)
[»] scaffold0607 (1 HSPs)
scaffold0607 (136-221)||(2233-2319)
[»] scaffold0087 (1 HSPs)
scaffold0087 (136-168)||(25148-25180)
[»] scaffold0060 (1 HSPs)
scaffold0060 (136-168)||(66262-66294)


Alignment Details
Target: chr2 (Bit Score: 162; Significance: 3e-86; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 242 - 418
Target Start/End: Complemental strand, 1020299 - 1020122
Alignment:
Q  242 tttattatattgagaggctcaaaagcctcgtctcgtttacgcttcacc-ccaaaggagaaatgcagcgacagaaacggagacggagaagttcaaaagcat 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1020299 tttattatattgagaggctcaaaagcctcgtctcgtttacgcttcaccgccaaaggagaaatgcagcgacagaaacggagacggagaagttcaaaagcat 1020200  T
Q  341 cattggcagtggcagataagatcagcaggttacaggacgatgttcttcactacatcctctctcttgtatccaccaaag 418  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1020199 cattggcagtggcggataagatcagcaggttaccggacgatgttcttcactacatcctctctcttgtatccaccaaag 1020122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 1021651 - 1021535
Alignment:
Q  13 aatatcatcgacctcattaactttatcgctctaaatcctatcattatgaaatctctaagtcacccaaatcatcgcatttaaaattaaccaaagtccttcc 112  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  1021651 aatatcatcgacctcattaactttatcactctaaatcctatcattacgaaatctctaagtcacccaaatcatcgcgtgtaaaattaaccaaagtccttcc 1021552  T
Q  113 ttgaatttctttgattt 129  Q
    |||||| ||||||||||    
T  1021551 ttgaatatctttgattt 1021535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 28365624 - 28365541
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatat-ggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    |||||||||  ||||||||||||||||||| |||||||  ||||||| ||| |||||||| ||| |||| |||||||||||||||    
T  28365624 ggggtcaaacgagcatatttccctaaatataggggtcacttttgtcattttttttcatag-gggtcaaaatcgcaactttttaaa 28365541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 2986806 - 2986718
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaacttttt 222  Q
    ||||||| |||||||| |||||||||||||||  ||| |||||||  ||||||| ||| ||| |||| |||||||| ||||||| ||||    
T  2986806 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgtcattttttttaatagggggccaaaatcgcaacatttt 2986718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 36464392 - 36464350
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    |||||||||||||||| | |||||||||||||| |||||||||    
T  36464392 tgttagggggtcaaaagatcatatttccctaaacatggggtca 36464350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 11176027 - 11175939
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaacttttt 222  Q
    ||||||| |||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| ||||    
T  11176027 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacatttt 11175939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 26829279 - 26829369
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataaggg 234  Q
    |||||| ||| ||||||||||| |||| ||| |||||  |||||||  || |||||||| |||||||| ||||||| ||||||| | ||||||    
T  26829279 ggggtccaaagagcatatttccttaaacatgaggtcacttttgtca--ttttttcatagggggccaaaatcgcaacattttaaaacttaaggg 26829369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 1020510 - 1020474
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatg 172  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  1020510 tgttagagggtcaaaatagcatatttccataaatatg 1020474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 4587981 - 4587949
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||||||||||| ||||||||||||||||    
T  4587981 tgttagggggtcaaaagagcatatttccctaaa 4587949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 38716313 - 38716223
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    ||||||| |||||||| |||||||||||||||  |||||||||||  |||| | |||| ||| |||| ||| |||| ||||||| |||||||    
T  38716313 tgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttg-ccatttttttaatagggggtcaaaatcgcaacattttaaa 38716223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 134; Significance: 1e-69; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 242 - 418
Target Start/End: Original strand, 8315395 - 8315574
Alignment:
Q  242 tttattatattgagaggctcaaaagcctcgtctcgtttacgcttcaccccaaaggagaa---atgcagcgacagaaacggagacggagaagttcaaaagc 338  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  8315395 tttattatattgagaggctcaaaagcctcgtctcgtttacgctacaccccaaaggagaagaaatgcagcgacagaaacggagacggagaagttcaaaagc 8315494  T
Q  339 atcattggcagtggcagataagatcagcaggttacaggacgatgttcttcactacatcctctctcttgtatccaccaaag 418  Q
    ||||||| ||||||| |||||||| ||||||||||  ||  |||||||||||||||||||||||||||||||||||||||    
T  8315495 atcattgacagtggcggataagatgagcaggttacctgataatgttcttcactacatcctctctcttgtatccaccaaag 8315574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 8313744 - 8313835
Alignment:
Q  13 aatatcatcgacctcattaactttatcgctctaaatcctatcattatgaaatctctaagtcacccaaatcatcgcatttaaaattaaccaaagtc 107  Q
    |||||||||||||||||||||||||||||| |||||   ||||||| ||| |||||||||||||||||||||||||| ||||||||| |||||||    
T  8313744 aatatcatcgacctcattaactttatcgctataaat---atcattacgaagtctctaagtcacccaaatcatcgcatgtaaaattaagcaaagtc 8313835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 8313839 - 8313917
Alignment:
Q  159 tttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataaggggtg 237  Q
    |||||||||| |||||| ||  ||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  8313839 tttccctaaaaatggggccacttttgtcaatttatttcatagagggctaaagtcgcaactttctaaaacataaggggtg 8313917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 23320475 - 23320384
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataaggggtg 237  Q
    |||||||||| |||||||||||||||| ||||| |||  |||||||   | |||||||| ||| |||| ||||||||||||||| | |||||||||    
T  23320475 ggggtcaaaagagcatatttccctaaacatgggatcacttttgtca---tttttcatag-gggtcaaaatcgcaactttttaaaacttaaggggtg 23320384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 32315039 - 32314966
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaa 209  Q
    |||||||||||||||| | |||||||||||||| |||| ||||  ||||||| ||| ||| |||| ||||||||    
T  32315039 tgttagggggtcaaaagaacatatttccctaaacatggagtcacttttgtcattttttttaatagggggccaaa 32314966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 175
Target Start/End: Complemental strand, 4775966 - 4775931
Alignment:
Q  140 agggggtcaaaatagcatatttccctaaatatgggg 175  Q
    ||||||||||||||||||||||||||||| ||||||    
T  4775966 agggggtcaaaatagcatatttccctaaacatgggg 4775931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 26127090 - 26127132
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    |||||| ||||||||||| |||||||||||||| |||||||||    
T  26127090 tgttagagggtcaaaataacatatttccctaaacatggggtca 26127132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 26177140 - 26177182
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    |||||| ||||||||||||||||||||||| || |||||||||    
T  26177140 tgttagagggtcaaaatagcatatttccctgaacatggggtca 26177182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 26628209 - 26628297
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaacttttt 222  Q
    ||||||| |||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| ||||    
T  26628209 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacatttt 26628297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 3780993 - 3780957
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    |||||||||| |||||||||||||||| |||||||||    
T  3780993 ggggtcaaaagagcatatttccctaaacatggggtca 3780957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 4522066 - 4521983
Alignment:
Q  144 ggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    |||||||| |||||||||||||||  |||||||||||  ||||  | ||| ||| |||| |||||||| ||||||| |||||||    
T  4522066 ggtcaaaagagcatatttccctaaacatatggggtcacttttgctactttttttaatagggggccaaaatcgcaacattttaaa 4521983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 20001829 - 20001797
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||||||||||| ||||||||||||||||    
T  20001829 tgttagggggtcaaaagagcatatttccctaaa 20001797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 23428803 - 23428835
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||||||||||| ||||||||||||||||    
T  23428803 tgttagggggtcaaaagagcatatttccctaaa 23428835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 26633548 - 26633584
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    |||||||||| |||||||||||||||| |||||||||    
T  26633548 ggggtcaaaagagcatatttccctaaagatggggtca 26633584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 28173913 - 28173945
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||||||||||| ||||||||||||||||    
T  28173913 tgttagggggtcaaaagagcatatttccctaaa 28173945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 40836365 - 40836405
Alignment:
Q  138 ttagggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    |||||||||||||| | |||||||||||||| |||||||||    
T  40836365 ttagggggtcaaaagaacatatttccctaaacatggggtca 40836405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 49657970 - 49658006
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  49657970 ggggtcaaaagagcatatttccctaaatattgggtca 49658006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 41663708 - 41663797
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    ||||| |||||||||| |||||||||||||||| |||||||||  ||||| | ||| |||| ||| |||||||| |||||||||||||||    
T  41663708 tgttatggggtcaaaagagcatatttccctaaacatggggtcacttttgtaattttttttcttagggggccaaaatcgcaactttttaaa 41663797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 23040229 - 23040320
Alignment:
Q  141 gggggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataaggg 234  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||  ||| ||| |||| ||| |||| ||||||||||||||| | ||||||    
T  23040229 gggggtcaaaagagcatatttccctaaatatggggtcacttttgtc-tttttttttatag-gggtcaaaatcgcaactttttaaaacttaaggg 23040320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 35302099 - 35302138
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatgggg 175  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  35302099 tgttagggggtcaaaagagcatatttccctaaatatgggg 35302138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 17825687 - 17825769
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatat--ggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    |||||||||| |||||||||||||||| ||  || |||| ||||||| |||| ||||  ||||||||||| |||||||||||||||    
T  17825687 ggggtcaaaagagcatatttccctaaacatgaggtgtcacatttgtc-atttttttc--agagggccaaaatcgcaactttttaaa 17825769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 18695123 - 18695033
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatat-ggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    ||||||| |||||||| |||||||||||||||| || |||||||  |||| || ||| ||| |||| ||| |||| ||||||| |||||||    
T  18695123 tgttaggaggtcaaaagagcatatttccctaaacataggggtcacttttgccattttttttaatagggggtcaaaatcgcaacattttaaa 18695033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 20653934 - 20653849
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatg--gggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    |||||||||| |||||||||||||||| |||   |||||  ||||||| ||| |||||||  ||| |||| |||||||||||||||    
T  20653934 ggggtcaaaagagcatatttccctaaacatgaaaggtcacttttgtcattttttttcataaggggtcaaaatcgcaactttttaaa 20653849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 23765574 - 23765664
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatat-ggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    ||||||| |||||||| |||||||||||||||| || |||||||  ||| ||| ||| ||| |||| |||||||| | ||||| |||||||    
T  23765574 tgttaggaggtcaaaagagcatatttccctaaacataggggtcacttttatcattttttttaatagggggccaaaattgcaacattttaaa 23765664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 23815422 - 23815512
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatat-ggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    ||||||| |||||||| |||||||||||||||| || |||||||  ||| ||| ||| ||| |||| |||||||| | ||||| |||||||    
T  23815422 tgttaggaggtcaaaagagcatatttccctaaacataggggtcacttttatcattttttttaatagggggccaaaattgcaacattttaaa 23815512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 8645917 - 8645829
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatat--ggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaacttttt 222  Q
    ||||||| |||||||| |||||||||||||||| ||  |||||||| |||| || ||| ||| |||| ||| |||| ||||||| ||||    
T  8645917 tgttaggaggtcaaaagagcatatttccctaaacattgggggtcaattttgccattttttttaatagggggtcaaaatcgcaacatttt 8645829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 25557059 - 25557091
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||||||||||| ||||||||||||||||    
T  25557059 tgttagggggtcaaaagagcatatttccctaaa 25557091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 51291354 - 51291455
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataagggg 235  Q
    |||||||||||||||| | |||||||||||||| ||| |||||  ||||||| ||| ||||||   |||||||| | ||||||||||||| | |||||||    
T  51291354 tgttagggggtcaaaagaacatatttccctaaacatgaggtcacttttgtcattttctttcattaggggccaaaattgcaactttttaaaacttaagggg 51291453  T
Q  236 tg 237  Q
    ||    
T  51291454 tg 51291455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 36729247 - 36729342
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatg-gggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataaggggtg 237  Q
    |||||||||| | |||||||||||||| ||| ||||||  ||||||||||| |||||||| | | |||| ||||||||||||||| | |||||||||    
T  36729247 ggggtcaaaagatcatatttccctaaacatgagggtcacttttgtcaattt-tttcatagggagtcaaaatcgcaactttttaaaacttaaggggtg 36729342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 25011855 - 25011767
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaacttttt 222  Q
    |||||||||||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| ||||    
T  25011855 tgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacatttt 25011767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 35475409 - 35475320
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    ||||||| |||||||| |||||||||||||||| || ||||||  |||| || ||| ||| |||| | |||||| ||||||| |||||||    
T  35475409 tgttaggaggtcaaaagagcatatttccctaaacatagggtcacttttgccattttttttaatagggagccaaaatcgcaacattttaaa 35475320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 27018338 - 27018302
Alignment:
Q  132 cttttgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||||||||||||||| ||||||||||||||||    
T  27018338 cttttgttagggggtcaaaagagcatatttccctaaa 27018302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 4433357 - 4433399
Alignment:
Q  126 attttgcttttgttagggggtcaaaatagcatatttccctaaa 168  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||    
T  4433357 attttccttatgttagggggtcaaaagagcatatttccctaaa 4433399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 20919523 - 20919615
Alignment:
Q  143 gggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataaggggtg 237  Q
    ||||||||| |||||||||||||||| || || |||  |||||| |||| |||||||| | | |||| ||||||||||||||| | |||||||||    
T  20919523 gggtcaaaagagcatatttccctaaacattggatcacttttgtc-atttttttcatag-gagtcaaaatcgcaactttttaaaacttaaggggtg 20919615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 5304521 - 5304617
Alignment:
Q  126 attttgcttttgttagggggtcaaaatagcatatttccctaaatat-ggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaacttttt 222  Q
    ||||| ||| ||||||| |||||||| |||||||||||||||| || |||||||  |||| | |||| ||| |||||||| |||| ||||||| ||||    
T  5304521 attttccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcacttttg-ccatttttttaatagagggtcaaaatcgcaacatttt 5304617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 43793815 - 43793902
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaacttttt 222  Q
    ||||||| |||||||| |||||||||||||||  |||||||||||  |||| | |||| ||| |||| |||||||| ||||||| ||||    
T  43793815 tgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttg-ccatttttttaatagggggccaaaatcgcaacatttt 43793902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 55780501 - 55780406
Alignment:
Q  142 ggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataagggg 235  Q
    |||||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| ||| ||| | |||||||    
T  55780501 ggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacatttgaaaacttaagggg 55780406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 55844681 - 55844586
Alignment:
Q  142 ggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataagggg 235  Q
    |||||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| ||| ||| | |||||||    
T  55844681 ggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacatttgaaaacttaagggg 55844586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 4455227 - 4455331
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatgggg--tcaaatttgtcaatttattt-catagagggccaaagtcgcaactttttaaatcataag 232  Q
    ||||| |||||||||| ||||||||| |||||| || |||  |||  ||||||||||| ||| |||||||||||||| ||||||||||||||| | ||||    
T  4455227 tgttacggggtcaaaagagcatattttcctaaacattggggatcacttttgtcaattttttttcatagagggccaaaatcgcaactttttaaaacttaag 4455326  T
Q  233 gggtg 237  Q
    |||||    
T  4455327 gggtg 4455331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 21148098 - 21147994
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcat-agagggccaaagtcgcaactttttaaatcataag 232  Q
    |||||||||||||||| |||||||||||||||  ||| |||||||  ||||||| ||| |||||| || |||||||| ||||||||||| ||| | ||||    
T  21148098 tgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgtcattttttttcataagggggccaaaatcgcaacttttaaaaacttaag 21147999  T
Q  233 gggtg 237  Q
    |||||    
T  21147998 gggtg 21147994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 46432400 - 46432501
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataagg 233  Q
    |||||||||||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| |||| || | |||||    
T  46432400 tgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttgaaacttaagg 46432499  T
Q  234 gg 235  Q
    ||    
T  46432500 gg 46432501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 24196381 - 24196293
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa--tatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaacttttt 222  Q
    ||||||| |||||||| |||||||||| |||||  ||||||||||  |||| || ||| ||| ||||||||||||| ||||||| ||||    
T  24196381 tgttaggaggtcaaaagagcatatttctctaaacatatggggtcacttttgccattttttttaatagagggccaaaatcgcaacatttt 24196293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 47685231 - 47685179
Alignment:
Q  126 attttgcttttgttagggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    ||||| ||| ||||||||| |||||||||||||||||| |||| |||||||||    
T  47685231 attttccttatgttaggggatcaaaatagcatatttccttaaacatggggtca 47685179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 21185318 - 21185228
Alignment:
Q  143 gggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataaggg 234  Q
    ||||||||| | |||||||||||||| |||||||||  ||| || |||| ||||||||  |||||||  |||||||||||||| | ||||||    
T  21185318 gggtcaaaagaacatatttccctaaacatggggtcacttttatc-atttttttcataggaggccaaaagcgcaactttttaaaacttaaggg 21185228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 2260569 - 2260658
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataaggg 234  Q
    |||||||||| |||||||||| ||||| |||||||||  ||||||| |||  ||||||| ||  |||| ||||||||||||||| | ||||||    
T  2260569 ggggtcaaaaaagcatatttcactaaacatggggtcacttttgtcatttt--ttcatag-ggatcaaaatcgcaactttttaaaacttaaggg 2260658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 28920835 - 28920923
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaacttttt 222  Q
    ||||||| |||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| ||||    
T  28920835 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacatttt 28920923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 43706844 - 43706928
Alignment:
Q  143 gggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    ||||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| |||||||    
T  43706844 gggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttaaa 43706928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 16551828 - 16551860
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||||||||||| ||||||||||||||||    
T  16551828 tgttagggggtcaaaagagcatatttccctaaa 16551860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 18791477 - 18791387
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    |||||||||||||||| |||||||||||||||  ||| |||||||  |||| | |||| ||| ||||||||||||| ||||||| |||||||    
T  18791477 tgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttg-ccatttttttaatagagggccaaaatcgcaacattttaaa 18791387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 22968338 - 22968438
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataagg 233  Q
    |||||||||||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| |||| || | |||||    
T  22968338 tgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatag-gggccaaaatcgcaacattttgaaacttaagg 22968436  T
Q  234 gg 235  Q
    ||    
T  22968437 gg 22968438  T

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Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 23820055 - 23819955
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataagg 233  Q
    |||||||||||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| |||| || | |||||    
T  23820055 tgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatag-gggccaaaatcgcaacattttgaaacttaagg 23819957  T
Q  234 gg 235  Q
    ||    
T  23819956 gg 23819955  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 4013853 - 4013890
Alignment:
Q  138 ttagggggtcaaaatagcatatttccctaaatatgggg 175  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  4013853 ttagggggtcaaaagagcatatttccctaaacatgggg 4013890  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 237
Target Start/End: Complemental strand, 26240071 - 26239974
Alignment:
Q  140 agggggtcaaaatagcatatttccctaaatatg--gggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataaggggtg 237  Q
    |||||||||||| ||||||||||| |||| |||  ||||||  ||||||| |||  ||||||| ||| |||| || |||||||||||| | |||||||||    
T  26240071 agggggtcaaaagagcatatttccgtaaacatgaggggtcacttttgtcatttt--ttcatagcgggacaaaatcacaactttttaaaacttaaggggtg 26239974  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 2059006 - 2059038
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||| ||||||||||||||||||||||||    
T  2059006 tgttagggtgtcaaaatagcatatttccctaaa 2059038  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 3118799 - 3118767
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||||||||||| ||||||||||||||||    
T  3118799 tgttagggggtcaaaagagcatatttccctaaa 3118767  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 222
Target Start/End: Complemental strand, 44147091 - 44147004
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatat-ggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaacttttt 222  Q
    ||||||| ||||||||||||||||||||||||| || |||||||  |||| || ||| ||| |||| |||||||| ||||||| ||||    
T  44147091 tgttaggaggtcaaaatagcatatttccctaaacataggggtcacttttgccattttttttaatagggggccaaaatcgcaacatttt 44147004  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 222
Target Start/End: Original strand, 7117299 - 7117385
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaacttttt 222  Q
    |||||| ||||||||| |||||||||| ||||| |||||||||  |||| || ||| ||| ||||  || |||| ||||||||||||    
T  7117299 tgttagtgggtcaaaagagcatatttctctaaacatggggtcacttttgccattttttttaataggtggtcaaaatcgcaacttttt 7117385  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 1824719 - 1824683
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    |||||||||| |||||||||||||||| |||||||||    
T  1824719 ggggtcaaaagagcatatttccctaaacatggggtca 1824683  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 1859164 - 1859128
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    |||||||||| |||||||||||||||| |||||||||    
T  1859164 ggggtcaaaagagcatatttccctaaacatggggtca 1859128  T

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Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 236
Target Start/End: Complemental strand, 10034 - 9941
Alignment:
Q  143 gggtcaaaatagcatatttccctaaatatg-gggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaatcataaggggt 236  Q
    ||||||||| |||||||||||||||| ||| ||||||  ||||||| ||| |||||||| |||||||| || ||||| |||||| | ||||||||    
T  10034 gggtcaaaagagcatatttccctaaacatgagggtcacttttgtcattttttttcatag-gggccaaaatcacaactatttaaaacttaaggggt 9941  T

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Target: scaffold0267 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 3752 - 3794
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  3752 tgttagggggtcaaaagagcatatttccctaaacatggggtca 3794  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 455050 - 454958
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatat--ggggtcaaatttgtcaatttattt-catagagggccaaagtcgcaactttttaaa 225  Q
    ||||||||||| |||| |||||||||||||||| ||  |||||||  ||||||| ||| ||| ||||| |||||||| || ||||||||||||    
T  455050 tgttagggggttaaaagagcatatttccctaaacatggggggtcacttttgtcattttttttccatagggggccaaaatcacaactttttaaa 454958  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 39182047 - 39181966
Alignment:
Q  144 ggtcaaaatagcatatttccctaaatatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    |||||||| |||||||||||||||| |||||||||  |||| || ||| ||| ||||  ||||||| ||||||| |||||||    
T  39182047 ggtcaaaagagcatatttccctaaacatggggtcatttttgccattttttttaataggaggccaaaatcgcaacattttaaa 39181966  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 20636739 - 20636648
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    ||||||| |||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| |||||||    
T  20636739 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttaaa 20636648  T

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Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 20638611 - 20638520
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttttaaa 225  Q
    ||||||| |||||||| |||||||||||||||  ||| |||||||  |||| || ||| ||| |||| |||||||| ||||||| |||||||    
T  20638611 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacattttaaa 20638520  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 177
Target Start/End: Complemental strand, 6650655 - 6650620
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatggggtc 177  Q
    |||||||||| |||||||||||||||||||||||||    
T  6650655 ggggtcaaaagagcatatttccctaaatatggggtc 6650620  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 15681717 - 15681624
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatat--ggggtcaaatttgtcaatttat--ttcatagagggccaaagtcgcaactttttaaa 225  Q
    |||||||||||||||| |||||||||||||||| ||  || |||| |||||||  ||| |  ||||||| || ||||| |||||||||||||||    
T  15681717 tgttagggggtcaaaagagcatatttccctaaacatgaggtgtcacatttgtcttttttttcttcataggggaccaaaatcgcaactttttaaa 15681624  T

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Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 24464695 - 24464653
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaatatggggtca 178  Q
    |||||||||||||||| | |||||||||||||| |||||||||    
T  24464695 tgttagggggtcaaaagaacatatttccctaaacatggggtca 24464653  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 19493433 - 19493388
Alignment:
Q  142 ggggtcaaaatagcatatttccctaaatatggggtcaaatttgtca 187  Q
    |||||||||||||||||||||| |||| |||||||||  |||||||    
T  19493433 ggggtcaaaatagcatatttccataaacatggggtcacttttgtca 19493388  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 18754450 - 18754482
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||||||||||| ||||||||||||||||    
T  18754450 tgttagggggtcaaaagagcatatttccctaaa 18754482  T

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Target: scaffold1202 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 1958 - 1990
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||||||||||||||||||||||||||||    
T  1958 tgttagggggtcaaaatagcatatttccctaaa 1990  T

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Target: scaffold0607 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 2233 - 2319
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaa--atatggggtcaaatttgtcaatttatttcatagagggccaaagtcgcaactttt 221  Q
    ||||||| |||||||| |||||||||||||||  ||| |||||||  |||| | |||| ||| |||| |||||||| |||||||||||    
T  2233 tgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttg-ccatttttttaatagggggccaaaatcgcaactttt 2319  T

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Target: scaffold0087 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 25148 - 25180
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    |||||||||||||||| ||||||||||||||||    
T  25148 tgttagggggtcaaaagagcatatttccctaaa 25180  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 66294 - 66262
Alignment:
Q  136 tgttagggggtcaaaatagcatatttccctaaa 168  Q
    ||||||| |||||||||||||||||||||||||    
T  66294 tgttaggaggtcaaaatagcatatttccctaaa 66262  T

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