View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7790_low_9 (Length: 431)

Name: NF7790_low_9
Description: NF7790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7790_low_9
NF7790_low_9
[»] chr8 (40 HSPs)
chr8 (119-431)||(20232177-20232494)
chr8 (17-112)||(20232007-20232102)
chr8 (331-431)||(35908685-35908795)
chr8 (331-431)||(17607201-17607311)
chr8 (332-431)||(15711503-15711612)
chr8 (384-431)||(8276556-8276603)
chr8 (384-431)||(14019815-14019862)
chr8 (384-431)||(18464077-18464124)
chr8 (384-431)||(38287787-38287834)
chr8 (384-430)||(35561674-35561720)
chr8 (384-431)||(18905863-18905910)
chr8 (384-431)||(21085198-21085245)
chr8 (384-431)||(32931408-32931455)
chr8 (384-430)||(5720917-5720963)
chr8 (384-430)||(43599319-43599365)
chr8 (384-424)||(3183961-3184001)
chr8 (384-431)||(9596043-9596090)
chr8 (384-431)||(9596269-9596316)
chr8 (384-431)||(23027555-23027602)
chr8 (384-431)||(34248084-34248131)
chr8 (384-431)||(39587908-39587955)
chr8 (384-430)||(8559589-8559635)
chr8 (384-430)||(10989291-10989337)
chr8 (384-430)||(15011079-15011125)
chr8 (384-430)||(42228779-42228825)
chr8 (385-430)||(20760711-20760756)
chr8 (385-425)||(3538031-3538071)
chr8 (384-431)||(8605497-8605544)
chr8 (384-431)||(20298566-20298613)
chr8 (384-431)||(21653334-21653381)
chr8 (384-431)||(23027878-23027925)
chr8 (384-431)||(34248366-34248413)
chr8 (337-417)||(38287957-38288047)
chr8 (384-430)||(15010871-15010917)
chr8 (384-426)||(40902443-40902485)
chr8 (384-430)||(45122319-45122365)
chr8 (389-430)||(8559733-8559774)
chr8 (389-430)||(33435891-33435932)
chr8 (384-429)||(43901067-43901112)
chr8 (386-430)||(8559851-8559894)
[»] chr7 (68 HSPs)
chr7 (119-431)||(44314084-44314401)
chr7 (17-112)||(44313914-44314009)
chr7 (331-431)||(33909144-33909254)
chr7 (331-431)||(27585263-27585373)
chr7 (335-431)||(34748785-34748891)
chr7 (331-431)||(36270457-36270567)
chr7 (331-431)||(36495896-36496006)
chr7 (331-431)||(47346081-47346191)
chr7 (331-431)||(47346310-47346420)
chr7 (334-431)||(36495673-36495780)
chr7 (331-431)||(34914907-34915017)
chr7 (337-431)||(37756158-37756261)
chr7 (384-431)||(39550028-39550075)
chr7 (384-431)||(43384330-43384377)
chr7 (331-431)||(24240181-24240275)
chr7 (337-431)||(37755932-37756035)
chr7 (337-431)||(37761906-37762009)
chr7 (384-431)||(36092649-36092696)
chr7 (384-431)||(37530973-37531020)
chr7 (331-431)||(24240393-24240487)
chr7 (331-429)||(36270684-36270792)
chr7 (346-431)||(7135245-7135340)
chr7 (384-431)||(257317-257364)
chr7 (384-431)||(19843714-19843761)
chr7 (384-431)||(20296270-20296317)
chr7 (384-431)||(22206328-22206375)
chr7 (384-431)||(22228364-22228411)
chr7 (384-431)||(40121989-40122036)
chr7 (387-431)||(1663658-1663702)
chr7 (384-428)||(22686783-22686827)
chr7 (384-431)||(1661241-1661288)
chr7 (384-431)||(36092442-36092489)
chr7 (384-431)||(37272095-37272142)
chr7 (384-431)||(41670590-41670637)
chr7 (384-431)||(43167943-43167990)
chr7 (384-431)||(43383996-43384043)
chr7 (384-430)||(6782834-6782880)
chr7 (384-430)||(6783046-6783092)
chr7 (384-430)||(9378801-9378847)
chr7 (384-426)||(9379012-9379054)
chr7 (384-418)||(14991559-14991593)
chr7 (384-418)||(15421170-15421204)
chr7 (384-430)||(29252584-29252630)
chr7 (384-430)||(39808647-39808693)
chr7 (384-430)||(48114005-48114051)
chr7 (385-430)||(21557024-21557069)
chr7 (384-428)||(43288274-43288318)
chr7 (384-428)||(47856041-47856085)
chr7 (384-430)||(2179662-2179709)
chr7 (387-430)||(16565106-16565149)
chr7 (387-430)||(16600513-16600556)
chr7 (384-431)||(28910039-28910086)
chr7 (384-431)||(40121668-40121715)
chr7 (384-430)||(6813128-6813174)
chr7 (392-430)||(19843492-19843530)
chr7 (384-430)||(31374773-31374819)
chr7 (337-383)||(33909371-33909417)
chr7 (384-430)||(35866689-35866735)
chr7 (384-430)||(36237810-36237856)
chr7 (385-430)||(8681892-8681937)
chr7 (384-429)||(10903327-10903372)
chr7 (384-429)||(10903534-10903579)
chr7 (384-429)||(14691081-14691126)
chr7 (384-429)||(23390599-23390644)
chr7 (385-430)||(23396617-23396662)
chr7 (330-383)||(27729460-27729513)
chr7 (384-429)||(31357725-31357770)
chr7 (384-429)||(33833959-33834004)
[»] chr1 (56 HSPs)
chr1 (331-431)||(17294985-17295095)
chr1 (331-427)||(29228459-29228565)
chr1 (331-431)||(12287855-12287965)
chr1 (331-431)||(29228682-29228792)
chr1 (331-431)||(45858662-45858772)
chr1 (335-431)||(4187505-4187610)
chr1 (384-431)||(28509437-28509484)
chr1 (331-431)||(33562114-33562224)
chr1 (384-431)||(40642826-40642873)
chr1 (385-431)||(45443227-45443273)
chr1 (341-431)||(51722260-51722361)
chr1 (384-431)||(2697381-2697428)
chr1 (384-431)||(4022175-4022222)
chr1 (384-431)||(18585045-18585092)
chr1 (384-431)||(19937093-19937140)
chr1 (384-431)||(40521543-40521590)
chr1 (331-431)||(31411543-31411657)
chr1 (388-431)||(4187336-4187379)
chr1 (384-431)||(17419794-17419841)
chr1 (384-431)||(30604510-30604557)
chr1 (384-431)||(38474290-38474337)
chr1 (385-431)||(8520144-8520190)
chr1 (384-430)||(39649134-39649180)
chr1 (386-431)||(29383675-29383720)
chr1 (384-431)||(27958097-27958144)
chr1 (384-431)||(31305718-31305765)
chr1 (384-430)||(11590428-11590474)
chr1 (384-430)||(13959410-13959456)
chr1 (384-430)||(15392033-15392079)
chr1 (389-431)||(20208137-20208179)
chr1 (389-431)||(20208436-20208478)
chr1 (384-430)||(43361602-43361648)
chr1 (384-430)||(43361807-43361853)
chr1 (384-430)||(52846899-52846945)
chr1 (386-430)||(29273277-29273321)
chr1 (384-428)||(43423289-43423333)
chr1 (385-428)||(2997312-2997355)
chr1 (384-431)||(27957859-27957906)
chr1 (384-431)||(33879828-33879875)
chr1 (384-431)||(33964380-33964427)
chr1 (384-431)||(40664217-40664264)
chr1 (384-430)||(2997106-2997152)
chr1 (385-431)||(11595237-11595283)
chr1 (384-430)||(15391756-15391802)
chr1 (384-426)||(15391831-15391873)
chr1 (384-430)||(39648928-39648973)
chr1 (384-430)||(48558371-48558417)
chr1 (402-431)||(17294874-17294903)
chr1 (384-429)||(22826795-22826840)
chr1 (384-429)||(25799129-25799174)
chr1 (384-428)||(20735532-20735576)
chr1 (384-431)||(28950968-28951013)
chr1 (386-430)||(29265926-29265970)
chr1 (333-377)||(30604449-30604493)
chr1 (387-431)||(45264670-45264714)
chr1 (386-430)||(49828679-49828723)
[»] chr5 (52 HSPs)
chr5 (331-428)||(5095888-5095990)
chr5 (335-431)||(30329843-30329949)
chr5 (331-431)||(32395301-32395411)
chr5 (335-431)||(83802-83907)
chr5 (337-431)||(84027-84131)
chr5 (331-431)||(2471680-2471790)
chr5 (331-431)||(29396330-29396440)
chr5 (335-431)||(22196317-22196423)
chr5 (384-431)||(38131771-38131818)
chr5 (385-431)||(14769883-14769929)
chr5 (341-431)||(22196550-22196650)
chr5 (384-431)||(873746-873793)
chr5 (384-431)||(1028143-1028190)
chr5 (384-431)||(19439867-19439914)
chr5 (392-431)||(33040292-33040331)
chr5 (384-431)||(37995684-37995731)
chr5 (384-431)||(39668467-39668514)
chr5 (385-431)||(27760082-27760128)
chr5 (384-426)||(30870935-30870977)
chr5 (384-430)||(35527038-35527084)
chr5 (384-430)||(38376739-38376785)
chr5 (384-430)||(43490306-43490352)
chr5 (384-429)||(3762915-3762960)
chr5 (390-431)||(33040477-33040518)
chr5 (331-431)||(24792254-24792363)
chr5 (387-430)||(395375-395418)
chr5 (384-431)||(13843704-13843751)
chr5 (384-431)||(13844020-13844067)
chr5 (384-430)||(48154-48200)
chr5 (384-430)||(15510554-15510600)
chr5 (385-431)||(28009848-28009894)
chr5 (384-430)||(28358085-28358131)
chr5 (331-431)||(30330068-30330180)
chr5 (384-430)||(34457311-34457357)
chr5 (384-430)||(43490513-43490559)
chr5 (385-430)||(11632439-11632484)
chr5 (384-428)||(9850483-9850527)
chr5 (384-431)||(29432419-29432466)
chr5 (384-431)||(30588064-30588111)
chr5 (387-430)||(39268026-39268069)
chr5 (384-430)||(2908612-2908658)
chr5 (384-430)||(13413592-13413638)
chr5 (384-430)||(17135527-17135573)
chr5 (384-422)||(18541738-18541776)
chr5 (397-431)||(18541957-18541991)
chr5 (333-383)||(24792111-24792161)
chr5 (384-430)||(34457104-34457150)
chr5 (392-430)||(35527199-35527237)
chr5 (384-430)||(37656782-37656828)
chr5 (384-430)||(37781894-37781940)
chr5 (384-430)||(40169091-40169137)
chr5 (331-383)||(33040535-33040587)
[»] chr4 (67 HSPs)
chr4 (335-431)||(11290176-11290282)
chr4 (335-431)||(46528914-46529020)
chr4 (335-431)||(50868004-50868110)
chr4 (330-431)||(2016539-2016650)
chr4 (387-431)||(4026080-4026124)
chr4 (331-431)||(33912050-33912160)
chr4 (384-431)||(51469488-51469535)
chr4 (387-431)||(37288922-37288966)
chr4 (384-431)||(15665160-15665207)
chr4 (384-431)||(22867091-22867138)
chr4 (384-431)||(29669413-29669460)
chr4 (384-431)||(37097781-37097828)
chr4 (388-431)||(51470490-51470533)
chr4 (384-431)||(52810675-52810722)
chr4 (384-431)||(53740189-53740236)
chr4 (384-430)||(43943681-43943727)
chr4 (384-426)||(49544344-49544386)
chr4 (390-431)||(43798183-43798224)
chr4 (383-431)||(36558515-36558563)
chr4 (387-431)||(47845795-47845839)
chr4 (384-431)||(990554-990601)
chr4 (384-431)||(29669728-29669775)
chr4 (384-431)||(43972362-43972409)
chr4 (384-427)||(45426986-45427029)
chr4 (384-431)||(50858335-50858382)
chr4 (384-431)||(53739873-53739920)
chr4 (384-431)||(56509616-56509663)
chr4 (384-430)||(5488375-5488421)
chr4 (384-430)||(12016733-12016779)
chr4 (384-430)||(12016941-12016987)
chr4 (385-431)||(13254390-13254436)
chr4 (384-430)||(27634376-27634422)
chr4 (384-430)||(28497264-28497310)
chr4 (384-430)||(39110915-39110961)
chr4 (384-430)||(49380930-49380976)
chr4 (385-431)||(50858019-50858065)
chr4 (384-429)||(1923041-1923086)
chr4 (384-425)||(23018483-23018524)
chr4 (384-429)||(29113458-29113503)
chr4 (384-421)||(35269028-35269065)
chr4 (386-430)||(50307284-50307328)
chr4 (388-431)||(991211-991254)
chr4 (384-427)||(5427139-5427182)
chr4 (384-431)||(26941868-26941915)
chr4 (384-431)||(27048458-27048505)
chr4 (384-431)||(29734568-29734615)
chr4 (385-428)||(33797160-33797203)
chr4 (384-431)||(43972046-43972093)
chr4 (384-431)||(48843067-48843114)
chr4 (384-431)||(52810902-52810949)
chr4 (384-431)||(53738258-53738305)
chr4 (384-426)||(991049-991091)
chr4 (384-430)||(3055791-3055837)
chr4 (384-430)||(4905555-4905601)
chr4 (384-430)||(7198036-7198082)
chr4 (384-430)||(21498539-21498585)
chr4 (384-430)||(21647631-21647677)
chr4 (384-430)||(25753655-25753701)
chr4 (388-430)||(26806519-26806561)
chr4 (384-430)||(52827282-52827328)
chr4 (384-430)||(54210385-54210431)
chr4 (384-425)||(4645865-4645906)
chr4 (389-430)||(8560026-8560067)
chr4 (331-368)||(42901887-42901924)
chr4 (384-429)||(49380669-49380714)
chr4 (384-428)||(9758314-9758358)
chr4 (386-430)||(53559357-53559401)
[»] chr3 (72 HSPs)
chr3 (331-431)||(24453785-24453895)
chr3 (335-431)||(48511401-48511507)
chr3 (335-431)||(48511630-48511736)
chr3 (335-431)||(10450639-10450745)
chr3 (341-431)||(15820602-15820702)
chr3 (331-431)||(9180375-9180485)
chr3 (339-431)||(11244536-11244638)
chr3 (329-428)||(42190462-42190570)
chr3 (384-431)||(53966240-53966287)
chr3 (383-431)||(51734606-51734654)
chr3 (335-431)||(10450415-10450521)
chr3 (384-431)||(22666368-22666415)
chr3 (384-431)||(54369046-54369093)
chr3 (384-431)||(5321586-5321633)
chr3 (384-431)||(9178914-9178961)
chr3 (384-431)||(10453753-10453800)
chr3 (384-431)||(10856676-10856723)
chr3 (384-431)||(27219336-27219383)
chr3 (335-431)||(40769903-40770009)
chr3 (384-431)||(41380731-41380778)
chr3 (384-431)||(43101421-43101468)
chr3 (384-431)||(44573333-44573380)
chr3 (384-431)||(47833712-47833759)
chr3 (384-430)||(4029694-4029740)
chr3 (384-430)||(42258918-42258964)
chr3 (384-430)||(49477542-49477588)
chr3 (384-430)||(54495539-54495585)
chr3 (386-431)||(2800013-2800058)
chr3 (384-431)||(3985780-3985827)
chr3 (384-431)||(9179140-9179187)
chr3 (384-431)||(13769341-13769388)
chr3 (331-431)||(16051522-16051632)
chr3 (331-431)||(16060872-16060982)
chr3 (384-431)||(34715505-34715552)
chr3 (384-431)||(45443287-45443334)
chr3 (384-431)||(48685367-48685414)
chr3 (384-431)||(48837058-48837105)
chr3 (384-431)||(50203907-50203954)
chr3 (384-430)||(4191172-4191218)
chr3 (384-430)||(9264136-9264182)
chr3 (384-430)||(9264550-9264596)
chr3 (384-430)||(22339749-22339795)
chr3 (384-426)||(24860111-24860153)
chr3 (384-430)||(34992585-34992631)
chr3 (384-430)||(34992877-34992923)
chr3 (384-430)||(37223583-37223629)
chr3 (384-430)||(50692331-50692377)
chr3 (384-430)||(51642685-51642731)
chr3 (387-431)||(16045423-16045467)
chr3 (384-428)||(29763746-29763790)
chr3 (386-430)||(54591517-54591561)
chr3 (384-431)||(4256241-4256288)
chr3 (387-430)||(25627974-25628017)
chr3 (387-430)||(26366739-26366782)
chr3 (384-431)||(42576298-42576345)
chr3 (331-378)||(53966323-53966370)
chr3 (384-426)||(5440589-5440631)
chr3 (384-430)||(9264343-9264389)
chr3 (393-431)||(10453944-10453982)
chr3 (335-377)||(10856617-10856659)
chr3 (388-430)||(21832745-21832787)
chr3 (384-430)||(39078821-39078867)
chr3 (384-430)||(39956724-39956770)
chr3 (384-430)||(42311221-42311267)
chr3 (384-430)||(50692534-50692580)
chr3 (384-430)||(51338491-51338537)
chr3 (384-430)||(53640222-53640268)
chr3 (384-429)||(11414373-11414417)
chr3 (384-429)||(39269509-39269554)
chr3 (384-429)||(40926463-40926508)
chr3 (384-429)||(40926712-40926757)
chr3 (384-429)||(40927039-40927084)
[»] chr2 (67 HSPs)
chr2 (331-431)||(10862045-10862155)
chr2 (337-431)||(936819-936923)
chr2 (331-431)||(15962144-15962254)
chr2 (331-431)||(39420704-39420814)
chr2 (329-431)||(33532721-33532833)
chr2 (384-431)||(4506090-4506137)
chr2 (331-431)||(10862313-10862423)
chr2 (331-431)||(11350174-11350284)
chr2 (331-431)||(32810863-32810973)
chr2 (384-431)||(11349843-11349890)
chr2 (331-431)||(15961787-15961897)
chr2 (337-431)||(17325177-17325281)
chr2 (387-431)||(28193388-28193432)
chr2 (384-431)||(3976521-3976568)
chr2 (384-431)||(3977053-3977100)
chr2 (384-431)||(14280287-14280334)
chr2 (384-431)||(28193625-28193672)
chr2 (384-431)||(43169249-43169296)
chr2 (384-430)||(883651-883697)
chr2 (384-430)||(6986466-6986512)
chr2 (384-430)||(12419846-12419892)
chr2 (384-430)||(12431906-12431952)
chr2 (384-430)||(12432113-12432159)
chr2 (384-430)||(17727412-17727458)
chr2 (385-431)||(30166130-30166176)
chr2 (337-431)||(36161340-36161444)
chr2 (384-429)||(27545166-27545211)
chr2 (384-428)||(6183416-6183460)
chr2 (385-425)||(43688472-43688512)
chr2 (388-431)||(3976209-3976252)
chr2 (384-431)||(4342308-4342355)
chr2 (384-431)||(10861884-10861931)
chr2 (384-431)||(11969059-11969106)
chr2 (384-431)||(18901914-18901961)
chr2 (384-431)||(21213935-21213982)
chr2 (384-431)||(25441703-25441750)
chr2 (383-430)||(29695388-29695435)
chr2 (384-431)||(43195791-43195838)
chr2 (384-431)||(44266358-44266405)
chr2 (384-430)||(3435536-3435582)
chr2 (384-430)||(19859933-19859979)
chr2 (384-430)||(19860045-19860091)
chr2 (384-430)||(20999039-20999085)
chr2 (384-430)||(26847292-26847338)
chr2 (384-428)||(21734426-21734470)
chr2 (390-426)||(30622126-30622162)
chr2 (390-426)||(30624747-30624783)
chr2 (390-426)||(30665456-30665492)
chr2 (384-428)||(33986025-33986069)
chr2 (384-431)||(42768384-42768429)
chr2 (384-431)||(7877851-7877898)
chr2 (384-431)||(14288928-14288975)
chr2 (384-419)||(14289145-14289180)
chr2 (384-431)||(21214251-21214298)
chr2 (384-431)||(23054333-23054380)
chr2 (384-430)||(884065-884111)
chr2 (384-430)||(7257658-7257704)
chr2 (384-430)||(16006985-16007031)
chr2 (384-430)||(25621335-25621381)
chr2 (384-430)||(34775365-34775411)
chr2 (394-431)||(15820161-15820198)
chr2 (389-430)||(31761140-31761181)
chr2 (384-429)||(39386679-39386724)
chr2 (386-430)||(883858-883902)
chr2 (386-430)||(10570943-10570987)
chr2 (394-430)||(33985829-33985865)
chr2 (385-425)||(35249745-35249785)
[»] chr6 (38 HSPs)
chr6 (331-431)||(26842727-26842837)
chr6 (331-431)||(25184217-25184327)
chr6 (384-431)||(33396314-33396361)
chr6 (384-431)||(8144024-8144071)
chr6 (384-431)||(12134533-12134580)
chr6 (384-431)||(16194027-16194074)
chr6 (384-431)||(21067107-21067154)
chr6 (384-431)||(21088898-21088945)
chr6 (331-431)||(25184010-25184120)
chr6 (384-431)||(26339892-26339939)
chr6 (384-431)||(27443587-27443634)
chr6 (385-431)||(24055160-24055206)
chr6 (384-426)||(33396537-33396579)
chr6 (384-431)||(17096748-17096795)
chr6 (384-431)||(19753654-19753701)
chr6 (384-431)||(21043831-21043878)
chr6 (384-430)||(5269323-5269369)
chr6 (384-430)||(15101161-15101207)
chr6 (384-430)||(16877060-16877106)
chr6 (385-431)||(19054500-19054546)
chr6 (389-431)||(27577839-27577881)
chr6 (331-425)||(8427563-8427667)
chr6 (386-431)||(30539242-30539287)
chr6 (386-430)||(6623477-6623521)
chr6 (384-428)||(11313432-11313476)
chr6 (331-383)||(30718746-30718798)
chr6 (384-431)||(1744892-1744939)
chr6 (384-431)||(10418388-10418435)
chr6 (337-425)||(13673868-13673966)
chr6 (384-431)||(27311234-27311281)
chr6 (385-431)||(31924-31970)
chr6 (384-430)||(24558591-24558637)
chr6 (389-431)||(27582124-27582166)
chr6 (384-421)||(19712659-19712696)
chr6 (384-425)||(24558801-24558842)
chr6 (384-429)||(28149802-28149847)
chr6 (387-431)||(16193659-16193703)
chr6 (386-430)||(30539428-30539472)
[»] scaffold0785 (1 HSPs)
scaffold0785 (384-431)||(3170-3217)
[»] scaffold0029 (1 HSPs)
scaffold0029 (346-430)||(76860-76954)
[»] scaffold0012 (1 HSPs)
scaffold0012 (384-431)||(165791-165838)
[»] scaffold0003 (1 HSPs)
scaffold0003 (384-431)||(43727-43774)
[»] scaffold0166 (2 HSPs)
scaffold0166 (331-431)||(34637-34746)
scaffold0166 (333-383)||(34494-34544)
[»] scaffold0989 (1 HSPs)
scaffold0989 (384-430)||(2997-3043)
[»] scaffold0054 (1 HSPs)
scaffold0054 (384-430)||(21313-21359)
[»] scaffold0434 (2 HSPs)
scaffold0434 (384-429)||(13315-13360)
scaffold0434 (384-430)||(13521-13567)


Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 119 - 431
Target Start/End: Original strand, 20232177 - 20232494
Alignment:
Q  119 ttcaatggaatatagaggagtggattggtggatagttatttttggagtttggtgaaaagatgaataagagtgaaaattcatcatttcaaaccacttccac 218  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20232177 ttcaatggaatatagaggagtggattggtggaaagttatttttggagtttggtgaaaagatgaataagagtgaaaattcatcatttcaaaccacttccac 20232276  T
Q  219 tagccttgttcttcctttgtttaatgaaagaaagaactaatccttagttcctaagcaaatgcaaagttgcattttacgcttgattatttttgttaatggc 318  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20232277 tagccctgttcttcctttgtttaatgaaagaaagaactaatccttagttcctaagcaaatgcaaagttgcattttacgcttgattatttttgttaatggc 20232376  T
Q  319 -----atgcttaataagtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtgactctttataaactcttctcaagaatcctat 413  Q
         ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||    
T  20232377 ttcaaatgcttaataagtgtaatgaatatcgaggcctaactcatctatacaaaaccggcttgtacggtgactctttataaactcttctcaagaatctcat 20232476  T
Q  414 ctatccgatgtgggacta 431  Q
    ||||||||||||||||||    
T  20232477 ctatccgatgtgggacta 20232494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 20232007 - 20232102
Alignment:
Q  17 aagaactgctactattgttattgaaagagctcaagaaatctgcaccaagagatcggtatttttaatattctctcattttctattttcgatgttcat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20232007 aagaactgctactattgttattgaaagagctcaagaaatctgcaccaagagatcggtatttttaatattctctcattttctattttcgatgttcat 20232102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 35908795 - 35908685
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          |||||||||||||||||||||| |||||||||| |||    
T  35908795 tgtaacgaatatcgaggcctaactcatccttacaaaaccggcttgtacggtgaggagtgccttctctttataaactcttctcaagtatcctatctacccg 35908696  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  35908695 atgtgggacta 35908685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 17607201 - 17607311
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  |||||||| || |||||||||||          ||||||||||||||||| |||||||||||||||||||    
T  17607201 tgtaacgaatatcgaggcctaactcatccttacaaaactggcttgtacggtgagtagtgcctcctctttataaactcttcacaagaatcctatctatccg 17607300  T
Q  421 atgtgggacta 431  Q
    ||||| |||||    
T  17607301 atgtgagacta 17607311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 332 - 431
Target Start/End: Complemental strand, 15711612 - 15711503
Alignment:
Q  332 gtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccga 421  Q
    |||| ||||||||||||||||||||||  || ||||| || |||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  15711612 gtaatgaatatcgaggcctaactcatccctataaaacaggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccga 15711513  T
Q  422 tgtgggacta 431  Q
    ||||||||||    
T  15711512 tgtgggacta 15711503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 8276603 - 8276556
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  8276603 ctctttataaactcttctcaagaatcctatctatccaatgtgggacta 8276556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 14019862 - 14019815
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  14019862 ctctttataaactcttctcaagaaacctatctatccgatgtgggacta 14019815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 18464124 - 18464077
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18464124 ctctttataaactcttctcaagaatcctatctatctgatgtgggacta 18464077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 38287787 - 38287834
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  38287787 ctctttataaactcttatcaagaatcctatctatccgatgtgggacta 38287834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 35561720 - 35561674
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  35561720 ctctttataaactcttctcaagaatcttatctatccgatgtgggact 35561674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 18905910 - 18905863
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  18905910 ctctttataaactcttctcaagagtgctatctatccgatgtgggacta 18905863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 21085198 - 21085245
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  21085198 ctctttataaactcttctcaagagtgctatctatccgatgtgggacta 21085245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 32931455 - 32931408
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||    
T  32931455 ctctttataaactcttctcaagaatgatatctatccgatgtgggacta 32931408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 5720917 - 5720963
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  5720917 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 5720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 43599365 - 43599319
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  43599365 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 43599319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 424
Target Start/End: Original strand, 3183961 - 3184001
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  3183961 ctctttataaactcttctcaagagtcctatctatccgatgt 3184001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 9596043 - 9596090
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  9596043 ctctttataaaatattctcaagaatcctatctatccgatgtggaacta 9596090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 9596269 - 9596316
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||| |||||||||||| || |||||    
T  9596269 ctctttataaactcttctcaagaatcttatctatccgatatgagacta 9596316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 23027555 - 23027602
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  23027555 ctctttataaactcttctcaagagttctatctatctgatgtgggacta 23027602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 34248131 - 34248084
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  34248131 ctctttataaactcttatcaagagtcctatctaaccgatgtgggacta 34248084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 39587908 - 39587955
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||||    
T  39587908 ctctttataaactcttctctagaatcctatccatctgatgtgggacta 39587955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 8559635 - 8559589
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||    
T  8559635 ctctttatatactcttctcaagagtcttatctatccgatgtgggact 8559589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 10989291 - 10989337
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  10989291 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 10989337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 15011079 - 15011125
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  15011079 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 15011125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 42228825 - 42228779
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  42228825 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 42228779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Original strand, 20760711 - 20760756
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||||||||| || | ||||||||||||||||||    
T  20760711 tctttataaactcttctcaagagtcttgtctatccgatgtgggact 20760756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 385 - 425
Target Start/End: Complemental strand, 3538071 - 3538031
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtg 425  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  3538071 tctttataaactcttctcaagagtcatatctatccgatgtg 3538031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 8605544 - 8605497
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||| ||||||||||||||||||||||||| ||||||| ||| |||||    
T  8605544 ctctatataaactcttctcaagaatcctatttatccgacgtgagacta 8605497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 20298566 - 20298613
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||  ||||||||  |||||||||||    
T  20298566 ctctttataaactcttctcaagaataatatctatcaaatgtgggacta 20298613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 21653381 - 21653334
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||| ||||||||||||||||||   ||||||||||||||||||||||    
T  21653381 ctctatataaactcttctcaagagcactatctatccgatgtgggacta 21653334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 23027878 - 23027925
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||| |||||||||||| | |||||||||| |||||||||||    
T  23027878 ctctttataagctcttctcaagagttctatctatcctatgtgggacta 23027925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 34248413 - 34248366
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||| ||||||||| || |||||||||||    
T  34248413 ctctttataaactcttatcaagagtcctatctaaccaatgtgggacta 34248366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 417
Target Start/End: Original strand, 38287957 - 38288047
Alignment:
Q  337 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctat 417  Q
    |||||||||| |||||||||||  ||||||||| | |||||||||||          ||||||||||||||||||||| ||||||||||||    
T  38287957 gaatatcgagacctaactcatccttacaaaaccagcttgtacggtgagtagtgtctcctctttataaactcttctcaaaaatcctatctat 38288047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 15010871 - 15010917
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||| ||||||||||| || | ||||||||||||||||||    
T  15010871 ctctttataaattcttctcaagagtcttgtctatccgatgtgggact 15010917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 40902443 - 40902485
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    ||||||||||||||||||||||| || | ||||||||||||||    
T  40902443 ctctttataaactcttctcaagagtcttgtctatccgatgtgg 40902485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 45122365 - 45122319
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || |||||||| |||||||||||    
T  45122365 ctctttatatactcttctcaagagtcttatctatcagatgtgggact 45122319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Original strand, 8559733 - 8559774
Alignment:
Q  389 tataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||| ||||||||||||| || ||||||||||||||||||||    
T  8559733 tatatactcttctcaagagtcttatctatccgatgtgggact 8559774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Complemental strand, 33435932 - 33435891
Alignment:
Q  389 tataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||| |||||| || ||||||||||||||||||||    
T  33435932 tataaactcttatcaagagtcttatctatccgatgtgggact 33435891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Original strand, 43901067 - 43901112
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  43901067 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 43901112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 8559851 - 8559894
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||    
T  8559851 ctttatatactcttctcaagagtc-tatctatccgatgtgggact 8559894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 119 - 431
Target Start/End: Original strand, 44314084 - 44314401
Alignment:
Q  119 ttcaatggaatatagaggagtggattggtggatagttatttttggagtttggtgaaaagatgaataagagtgaaaattcatcatttcaaaccacttccac 218  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44314084 ttcaatggaatatagaggagtggattggtggaaagttatttttggagtttggtgaaaagatgaataagagtgaaaattcatcatttcaaaccacttccac 44314183  T
Q  219 tagccttgttcttcctttgtttaatgaaagaaagaactaatccttagttcctaagcaaatgcaaagttgcattttacgcttgattatttttgttaatggc 318  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44314184 tagccctgttcttcctttgtttaatgaaagaaagaactaatccttagttcctaagcaaatgcaaagttgcattttacgcttgattatttttgttaatggc 44314283  T
Q  319 -----atgcttaataagtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtgactctttataaactcttctcaagaatcctat 413  Q
         ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||    
T  44314284 ttcaaatgcttaataagtgtaatgaatatcgaggcctaactcatctatacaaaaccggcttgtacggtgactctttataaactcttctcaagaatctcat 44314383  T
Q  414 ctatccgatgtgggacta 431  Q
    ||||||||||||||||||    
T  44314384 ctatccgatgtgggacta 44314401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 44313914 - 44314009
Alignment:
Q  17 aagaactgctactattgttattgaaagagctcaagaaatctgcaccaagagatcggtatttttaatattctctcattttctattttcgatgttcat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44313914 aagaactgctactattgttattgaaagagctcaagaaatctgcaccaagagatcggtatttttaatattctctcattttctattttcgatgttcat 44314009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 33909254 - 33909144
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||| |||||||||||||||||||||| |||||||||||| |||||| ||||          |||||||||||||||||||||||||||||||||||||    
T  33909254 tgtaaagaatatcgaggcctaactcatccatacaaaaccggcttgtacagtgaggagtgtatcctctttataaactcttctcaagaatcctatctatccg 33909155  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  33909154 atgtgggacta 33909144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 27585373 - 27585263
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||||||||||||| |||||||||||  ||||||||||| |||||||||||          || ||||||||||||||||||||||||||||||||||    
T  27585373 tgtaacgaatatcgagacctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctttttataaactcttctcaagaatcctatctatccg 27585274  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  27585273 atgtgggacta 27585263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 431
Target Start/End: Complemental strand, 34748891 - 34748785
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    ||||||||||||| ||||||||||  ||||||||||| |||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  34748891 acgaatatcgaggtctaactcatccttacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagaatcctatctatccgatgt 34748792  T
Q  425 gggacta 431  Q
    |||||||    
T  34748791 gggacta 34748785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 36270457 - 36270567
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  |||||| |||| |||||||||||          |||||||||||||| ||||||||||||||||||||||    
T  36270457 tgtaacgaatatcgaggcctaactcatccttacaaagccggcttgtacggtgaggagtgtctcctctttataaactcgtctcaagaatcctatctatccg 36270556  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  36270557 atgtgggacta 36270567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 36496006 - 36495896
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||||||||| |||||||||||||||  ||||||||||| |||||||||||          ||||||||||||| |||||||||||||||||||||||    
T  36496006 tgtaacgaatatagaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagaatcctatctatccg 36495907  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  36495906 atgtgggacta 36495896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 47346081 - 47346191
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          ||||||||||||||||||||||| ||||||||||| |    
T  47346081 tgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatctg 47346180  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  47346181 atgtgggacta 47346191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 47346310 - 47346420
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          ||||||||||||||||||||||| |||||||| ||||    
T  47346310 tgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctttccg 47346409  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  47346410 atgtgggacta 47346420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 334 - 431
Target Start/End: Complemental strand, 36495780 - 36495673
Alignment:
Q  334 aacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatg 423  Q
    |||||||||||||||||||||||||  ||||||||||| || ||||||||          ||||||||||||| ||||||||||||||||||||||||||    
T  36495780 aacgaatatcgaggcctaactcatccctacaaaaccggcttctacggtgaggagtgcctcctctttataaactattctcaagaatcctatctatccgatg 36495681  T
Q  424 tgggacta 431  Q
    ||||||||    
T  36495680 tgggacta 36495673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 34914907 - 34915017
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||           ||||| ||||||||||||||||||||| ||||||||    
T  34914907 tgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcatctttgtaaactcttctcaagaatcctgtctatccg 34915006  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  34915007 atgtgggacta 34915017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 431
Target Start/End: Original strand, 37756158 - 37756261
Alignment:
Q  337 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    |||||||||||||||||||||| ||| |||||||| |||||||||||          ||||||||||||||||||||||| |||||||||||||||||||    
T  37756158 gaatatcgaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgg 37756256  T
Q  427 gacta 431  Q
    |||||    
T  37756257 gacta 37756261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 39550028 - 39550075
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39550028 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 39550075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 43384330 - 43384377
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43384330 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 43384377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 24240181 - 24240275
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtgactctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||| ||||||||||||||||||||||  ||||||||||| ||||| |||||        ||||||||||||||| |||||||||||||||||||||||    
T  24240181 tgtaatgaatatcgaggcctaactcatcagtacaaaaccggcttgtatggtgagg------aaactcttctcaagattcctatctatccgatgtgggact 24240274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 337 - 431
Target Start/End: Original strand, 37755932 - 37756035
Alignment:
Q  337 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    |||||| ||||||||||||||| ||| |||||||| |||||||||||          ||||||||||||||||||||||| |||||||||||||||||||    
T  37755932 gaatattgaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgg 37756030  T
Q  427 gacta 431  Q
    |||||    
T  37756031 gacta 37756035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 337 - 431
Target Start/End: Original strand, 37761906 - 37762009
Alignment:
Q  337 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    |||||| ||||||||||||||| ||| |||||||| |||||||||||          ||||||||||||||||||||||| |||||||||||||||||||    
T  37761906 gaatattgaggcctaactcatccata-aaaaccggcttgtacggtgaagagtgcctcctctttataaactcttctcaagattcctatctatccgatgtgg 37762004  T
Q  427 gacta 431  Q
    |||||    
T  37762005 gacta 37762009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 36092649 - 36092696
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  36092649 ctctctataaactcttctcaagaatcctatctatccgatgtgggacta 36092696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 37530973 - 37531020
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  37530973 ctctttataaactcttctcaagaatcctatctatccgacgtgggacta 37531020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 24240393 - 24240487
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtgactctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||| ||||||||||||||  ||||||||||| |||||||||||        |||||||||| |||| |||||||||||||||||||||||    
T  24240393 tgtaacgaacatcaaggcctaactcatccgtacaaaaccggcttgtacggtga------ggaaactcttcttaagattcctatctatccgatgtgggact 24240486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 429
Target Start/End: Original strand, 36270684 - 36270792
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||| |||||||||||||||||||||  ||||||||||| |||||| ||||          |||||||||||||| | |||||||||||||||||||     
T  36270684 tgtaacaaatatcgaggcctaactcatccttacaaaaccggcttgtacagtgaggagtgcctcctctttataaactcctgtcaagaatcctatctatcca 36270783  T
Q  421 atgtgggac 429  Q
    |||||||||    
T  36270784 atgtgggac 36270792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 431
Target Start/End: Original strand, 7135245 - 7135340
Alignment:
Q  346 ggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||| ||||||||||| ||||| |||||          ||||||||||||||||||||||| |||||||||||||||||| |||||    
T  7135245 ggcctaactcatctttacaaaaccggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgtgacta 7135340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 257317 - 257364
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||    
T  257317 ctctttataaactcttctcaagaataatatctatccgatgtgggacta 257364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 19843761 - 19843714
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  19843761 ctctttataaactcttctcaagaatcctatctatctgatttgggacta 19843714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 20296317 - 20296270
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  20296317 ctctttataaactcttctcaagaatcctctctatccaatgtgggacta 20296270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 22206328 - 22206375
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||    
T  22206328 ctctttataaacttttctcaagaatcctatctattcgatgtgggacta 22206375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 22228411 - 22228364
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||    
T  22228411 ctctttataaacttttctcaagaatcctatctattcgatgtgggacta 22228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 40121989 - 40122036
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  40121989 ctctttataaactcttctcaagagtactatctatccgatgtgggacta 40122036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 1663658 - 1663702
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||| | ||||||||||||||||||||||    
T  1663658 tttataaactcttctcaagagtgctatctatccgatgtgggacta 1663702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 22686783 - 22686827
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||    
T  22686783 ctctttataaactcttttcaagaatcctatttatccgatgtggga 22686827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 1661241 - 1661288
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||    
T  1661241 ctctttataaactcttctcaagagttttatctatccgatgtgggacta 1661288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 36092442 - 36092489
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  36092442 ctctctataaactcttctcaagaatcatatctatccaatgtgggacta 36092489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 37272095 - 37272142
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  37272095 ctctttataaactcttatcaagagtcctatctaaccgatgtgggacta 37272142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 41670637 - 41670590
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||    
T  41670637 ctctttataaactcttctcaagagtactatctattcgatgtgggacta 41670590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 43167943 - 43167990
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  43167943 ctctttataaactcttctcaagagtgctatctatccgatttgggacta 43167990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 43383996 - 43384043
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  43383996 ctctttataaactctttgcaagactcctatctatccgatgtgggacta 43384043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 6782880 - 6782834
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||    
T  6782880 ctctttataaactcttctcaagagtcttatctatccgatgtgagact 6782834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 6783092 - 6783046
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||    
T  6783092 ctctttataaactcttctcaagagtcttatctatccgatgtgagact 6783046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 9378847 - 9378801
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||    
T  9378847 ctctttataaactcttctcaagagtcttatctattcgatgtgggact 9378801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 9379054 - 9379012
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  9379054 ctctttataaactcttctcaagagtcttatctatccgatgtgg 9379012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 418
Target Start/End: Original strand, 14991559 - 14991593
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatc 418  Q
    |||||||||||||||||||||||||||||||||||    
T  14991559 ctctttataaactcttctcaagaatcctatctatc 14991593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 418
Target Start/End: Original strand, 15421170 - 15421204
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatc 418  Q
    |||||||||||||||||||||||||||||||||||    
T  15421170 ctctttataaactcttctcaagaatcctatctatc 15421204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 29252630 - 29252584
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||    
T  29252630 ctctttataaactcttctcaagagtcttatctatccgacgtgggact 29252584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 39808647 - 39808693
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  39808647 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 39808693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 48114051 - 48114005
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||| |||||| || ||||||||||||||||||||    
T  48114051 ctctttataaactcttatcaagagtcttatctatccgatgtgggact 48114005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 21557069 - 21557024
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||| |||||| | |||||||||||||||||||||    
T  21557069 tctttataaactcttatcaagagttctatctatccgatgtgggact 21557024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 43288318 - 43288274
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    |||||||||||||||| |||||| ||||||||| |||||||||||    
T  43288318 ctctttataaactcttatcaagagtcctatctaaccgatgtggga 43288274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 47856041 - 47856085
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    |||||||||||||||| |||||| || ||||||||||||||||||    
T  47856041 ctctttataaactcttatcaagagtcttatctatccgatgtggga 47856085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 2179709 - 2179662
Alignment:
Q  384 ctctttataaactctt-ctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||| ||||||| || ||||||||||||||||||||    
T  2179709 ctctttataaactctttctcaagagtcttatctatccgatgtgggact 2179662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 16565149 - 16565106
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||| |||||| || ||||||||||||||||||||    
T  16565149 tttataaactcttatcaagagtcttatctatccgatgtgggact 16565106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 16600513 - 16600556
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||| |||||| || ||||||||||||||||||||    
T  16600513 tttataaactcttatcaagagtcttatctatccgatgtgggact 16600556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 28910086 - 28910039
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||| ||||| |||||||||||  |||||||||||    
T  28910086 ctctttataaactcttcccaagagtcctatctatcttatgtgggacta 28910039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 40121668 - 40121715
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||| |||||||||||||||||| | ||||||||||||||||| ||||    
T  40121668 ctctctataaactcttctcaagagtactatctatccgatgtggaacta 40121715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 6813128 - 6813174
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||  |||||| ||| |||||||||||||||||||    
T  6813128 ctctttataaactctcatcaagagtcccatctatccgatgtgggact 6813174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 430
Target Start/End: Complemental strand, 19843530 - 19843492
Alignment:
Q  392 aaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  19843530 aaactcttctcaataatcctatctatccgatttgggact 19843492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 31374819 - 31374773
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||| | || |||||||||||||| |||||    
T  31374819 ctctttataaactcttctcaatagtcttatctatccgatgtaggact 31374773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 33909417 - 33909371
Alignment:
Q  337 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga 383  Q
    |||||| ||||||||||||||| |||||||||||| |||||| ||||    
T  33909417 gaatattgaggcctaactcatccatacaaaaccggcttgtacagtga 33909371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 35866689 - 35866735
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||| ||||||||||| |||||| || ||||||||||||||||||||    
T  35866689 ctctatataaactcttatcaagagtcttatctatccgatgtgggact 35866735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 36237856 - 36237810
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||| |||||| |||||| ||||| ||||||||||    
T  36237856 ctctttataaactcttatcaagagtcctatgtatccaatgtgggact 36237810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 8681937 - 8681892
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||| |||||| || |||||||| |||||||||||    
T  8681937 tctttataaactcttatcaagagtcttatctatctgatgtgggact 8681892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Original strand, 10903327 - 10903372
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  10903327 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 10903372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Original strand, 10903534 - 10903579
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  10903534 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 10903579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 14691126 - 14691081
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||    
T  14691126 ctctttataaactcttatcaagcgtcctatctaaccgatgtgggac 14691081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 23390644 - 23390599
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  23390644 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 23390599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 23396662 - 23396617
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||| ||||||||||||| || |||||||||| |||||||||    
T  23396662 tctttatatactcttctcaagagtcttatctatccgttgtgggact 23396617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 383
Target Start/End: Original strand, 27729460 - 27729513
Alignment:
Q  330 gtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga 383  Q
    |||| |||||||||||| |||||||||||  ||||||| ||| |||||||||||    
T  27729460 gtgtcacgaatatcgagacctaactcatccttacaaaatcggcttgtacggtga 27729513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Original strand, 31357725 - 31357770
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  31357725 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 31357770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 33834004 - 33833959
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  33834004 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 33833959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 8e-28; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 17295095 - 17294985
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          |||||||||||||||||||||||||||||||||||||    
T  17295095 tgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccg 17294996  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  17294995 atgtgggacta 17294985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 29228565 - 29228459
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          ||||||||||||||||||||||| |||||||||||||    
T  29228565 tgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatccg 29228466  T
Q  421 atgtggg 427  Q
    |||||||    
T  29228465 atgtggg 29228459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 12287965 - 12287855
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  ||||||||| | |||||||||||          |||||||||| ||||| ||||||||||||||||||||    
T  12287965 tgtaacgaatatcgaggcctaactcatccttacaaaaccagcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatctatccg 12287866  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  12287865 atgtgggacta 12287855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 29228792 - 29228682
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  |||||| |||| |||||| ||||          ||||||||||||||||||||||| |||||||||||||    
T  29228792 tgtaacgaatatcgaggcctaactcatccctacaaatccggcttgtacagtgaggagtgcctcctctttataaactcttctcaagattcctatctatccg 29228693  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  29228692 atgtgggacta 29228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 45858772 - 45858662
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||||||||| |||||||||||||||  || |||||||  |||||||||||          |||||||||||||||||||||||||||||||||||||    
T  45858772 tgtaacgaatattgaggcctaactcatccttataaaaccgacttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatccg 45858673  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  45858672 atgtgggacta 45858662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 4187505 - 4187610
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga-------ctctt--tataaactcttctcaagaatcctatctatccgatgtg 425  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||||||       ||| |  |||||||||||||||||| ||||||||||||||||||    
T  4187505 acgaatatcgaggcgtaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctcttataaactcttctcaagattcctatctatccgatgtg 4187604  T
Q  426 ggacta 431  Q
    ||||||    
T  4187605 ggacta 4187610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 28509437 - 28509484
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28509437 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 28509484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 33562114 - 33562224
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||| ||||||||||||||   |||||||||| |||||||||||          |||||||||| ||||| ||||||||||||||||||||    
T  33562114 tgtaacgaatatcaaggcctaactcatccccacaaaaccggcttgtacggtgaggagtgcctcctctttataacctcttttcaagaatcctatctatccg 33562213  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  33562214 atgtgggacta 33562224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 40642826 - 40642873
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40642826 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 40642873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 431
Target Start/End: Complemental strand, 45443273 - 45443227
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  45443273 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 45443227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 431
Target Start/End: Complemental strand, 51722361 - 51722260
Alignment:
Q  341 atcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctct-ttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    ||||||||||||||||||  ||||||||||| |||||||||||          |||| ||||||||||||||||||||||||||||||||||||||||||    
T  51722361 atcgaggcctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctctcttataaactcttctcaagaatcctatctatccgatgtgggac 51722262  T
Q  430 ta 431  Q
    ||    
T  51722261 ta 51722260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 2697381 - 2697428
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2697381 ctctttataaactcttctcaagagtcctatctatccgatgtgggacta 2697428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 4022175 - 4022222
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4022175 ctctttataaactcttctcaagagtcctatctatccgatgtgggacta 4022222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 18585092 - 18585045
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18585092 ctctttataaaatcttctcaagaatcctatctatccgatgtgggacta 18585045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 19937093 - 19937140
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19937093 ctctttataaactcttctcaagaattctatctatccgatgtgggacta 19937140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 40521543 - 40521590
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  40521543 ctctttataaactcttctcaagaatcttatctatccgatgtgggacta 40521590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 31411543 - 31411657
Alignment:
Q  331 tgtaacgaatatcgaggcctaact----catctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatcta 416  Q
    ||||||||||||||||||||||||    |||| |||||||||||| |||||||||||          || ||||||||||||| ||||||||||||||||    
T  31411543 tgtaacgaatatcgaggcctaacttatccatccatacaaaaccggcttgtacggtgagatgtgcctcctttttataaactcttttcaagaatcctatcta 31411642  T
Q  417 tccgatgtgggacta 431  Q
    || ||||||||||||    
T  31411643 tctgatgtgggacta 31411657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 431
Target Start/End: Original strand, 4187336 - 4187379
Alignment:
Q  388 ttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  4187336 ttataaactcttctcaagattcctatctatccgatgtgggacta 4187379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 17419841 - 17419794
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  17419841 ctctttataaactcttctcaagagtgctatctatccgatgtgggacta 17419794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 30604510 - 30604557
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  30604510 ctctttataaactattctcaagattcctatctatccgatgtgggacta 30604557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 38474337 - 38474290
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  38474337 ctctttataaactcttgtcaagaatcctatctatccgatgtaggacta 38474290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 385 - 431
Target Start/End: Original strand, 8520144 - 8520190
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||    
T  8520144 tctttataaactcttctcaagagtgctatctatccgatgtgggacta 8520190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 39649134 - 39649180
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  39649134 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 39649180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 29383675 - 29383720
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  29383675 ctttataaactcttctcaagtatcttatctatccgatgtgggacta 29383720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 27958097 - 27958144
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||    
T  27958097 ctctttataaactcttctcaagaatcctatctatctaatgcgggacta 27958144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 31305765 - 31305718
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  31305765 ctctttataaactcttctcaagagtgctatctatcggatgtgggacta 31305718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 11590474 - 11590428
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  11590474 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 11590428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 13959456 - 13959410
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||    
T  13959456 ctctttataaactcttctcaagagtcttatctatccgatgtgagact 13959410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 15392079 - 15392033
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||    
T  15392079 ctctttatatactcttctcaagagtcttatctatccgatgtgggact 15392033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 431
Target Start/End: Original strand, 20208137 - 20208179
Alignment:
Q  389 tataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  20208137 tataaactcttttcaagaatcatatctatccgatgtgggacta 20208179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 431
Target Start/End: Original strand, 20208436 - 20208478
Alignment:
Q  389 tataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  20208436 tataaactcttttcaagaatcatatctatccgatgtgggacta 20208478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 43361602 - 43361648
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  43361602 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 43361648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 43361807 - 43361853
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  43361807 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 43361853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 52846899 - 52846945
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||    
T  52846899 ctctttatatactcttctcaagagtcttatctatccgatgtgggact 52846945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 29273277 - 29273321
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||| || | ||||||||||||||||||    
T  29273277 ctttataaactcttctcaagagtcttgtctatccgatgtgggact 29273321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 43423333 - 43423289
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||    
T  43423333 ctctttataaactcttctcaagagtgttatctatccgatgtggga 43423289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 428
Target Start/End: Original strand, 2997312 - 2997355
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    |||||||| ||||||||||||| || ||||||||||||||||||    
T  2997312 tctttatatactcttctcaagagtcttatctatccgatgtggga 2997355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 27957859 - 27957906
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||| ||||||||||||| ||||||| |||| |||||||    
T  27957859 ctctttataaacttttctcaagaatcccatctatcagatgcgggacta 27957906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 33879828 - 33879875
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | |||| |||| ||||||||||||    
T  33879828 ctctttataaactcttctcaagagtgctatatatctgatgtgggacta 33879875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 33964427 - 33964380
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | |||| |||| ||||||||||||    
T  33964427 ctctttataaactcttctcaagagtgctatatatctgatgtgggacta 33964380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 40664264 - 40664217
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||| ||||||||| |||||||| |||||    
T  40664264 ctctttataaactcttatcaagagtcctatctaaccgatgtgagacta 40664217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 2997106 - 2997152
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| |  ||||||||||||||||||||    
T  2997106 ctctttatatactcttctcaagagttttatctatccgatgtgggact 2997152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 431
Target Start/End: Complemental strand, 11595283 - 11595237
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||| || |||||| |||||||||||||||||| |||||    
T  11595283 tctttataaacttttatcaagactcctatctatccgatgtgagacta 11595237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 15391802 - 15391756
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||| ||||||||| || ||||||||||||||||||||    
T  15391802 ctctttatatacttttctcaagagtcttatctatccgatgtgggact 15391756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 15391873 - 15391831
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    ||||||||| ||||||||||||| || ||||||||||||||||    
T  15391873 ctctttatatactcttctcaagagtcttatctatccgatgtgg 15391831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 39648928 - 39648973
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||| ||||||||||||    
T  39648928 ctctttataaactcttctcaagagtcttatctat-cgatgtgggact 39648973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 48558371 - 48558417
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || |||||||||||| |||||||    
T  48558371 ctctttatatactcttctcaagagtcttatctatccgatatgggact 48558417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 431
Target Start/End: Complemental strand, 17294903 - 17294874
Alignment:
Q  402 caagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||    
T  17294903 caagaatcctatctatccgatgtgggacta 17294874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Original strand, 22826795 - 22826840
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  22826795 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 22826840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 25799174 - 25799129
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    ||||||||||||||||||||||| |  |||||||| ||||||||||    
T  25799174 ctctttataaactcttctcaagagttttatctatctgatgtgggac 25799129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 20735576 - 20735532
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    ||||||||||| ||||||||||| | ||||||||| |||||||||    
T  20735576 ctctttataaattcttctcaagagtactatctatctgatgtggga 20735532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 28950968 - 28951013
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||| ||||  | |||||||||||||    
T  28950968 ctctttataaactcttctcaagaatcttatc--ttcgatgtgggacta 28951013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 29265970 - 29265926
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||| ||||||||||||| || |||| |||||||||||||||    
T  29265970 ctttatatactcttctcaagagtcttatccatccgatgtgggact 29265926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 377
Target Start/End: Original strand, 30604449 - 30604493
Alignment:
Q  333 taacgaatatcgaggcctaactcatctatacaaaaccggattgta 377  Q
    ||||||||||| || ||||||||||| |||||||||||| |||||    
T  30604449 taacgaatatcaagacctaactcatccatacaaaaccggcttgta 30604493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 431
Target Start/End: Complemental strand, 45264714 - 45264670
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||| |||||| |||||||||| ||| |||||||||    
T  45264714 tttataaactcttatcaagagtcctatctattcgacgtgggacta 45264670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 49828723 - 49828679
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| |||| |||||| ||||||||||| |||||||||||    
T  49828723 ctttataaaatcttatcaagagtcctatctatcagatgtgggact 49828679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 331 - 428
Target Start/End: Original strand, 5095888 - 5095990
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga-----ctctttataaactcttctcaagaatcctatctatccgatgtg 425  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||| |||||     |||||||||||||||||| || ||||||||||||||||||||    
T  5095888 tgtaacgaatatcgaggcctaactcatccctacaaaaccggcttgtagggtgaggatcctctttataaactcttctaaaaaatcctatctatccgatgtg 5095987  T
Q  426 gga 428  Q
    |||    
T  5095988 gga 5095990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 431
Target Start/End: Complemental strand, 30329949 - 30329843
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    |||||||||||||||||||| ||| |||||||||||  |||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  30329949 acgaatatcgaggcctaactgatccatacaaaaccgacttgtacggtgaggagttcctcctctttataaactcttctcaagaatcctatctatccgatgt 30329850  T
Q  425 gggacta 431  Q
    |||||||    
T  30329849 gggacta 30329843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 32395301 - 32395411
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||||||||||||||| ||||||||| |||||||||||| |||||| ||||          ||||||||||||||||||||||| |||||||||||||    
T  32395301 tgtaacgaatatcgaggcgtaactcatccatacaaaaccggcttgtacagtgaggagtgcctcctctttataaactcttctcaagattcctatctatccg 32395400  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  32395401 atgtgggacta 32395411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 83802 - 83907
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga---------ctctttataaactcttctcaagaatcctatctatccgatgtg 425  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||||||         ||||||||||||| |||||||||||||||| |||||||||||    
T  83802 acgaatatcgagacctaactcatccatacaaaaccggcttgtacggtgagagtgcctcctctttataaacttttctcaagaatcctatatatccgatgtg 83901  T
Q  426 ggacta 431  Q
    ||||||    
T  83902 ggacta 83907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 337 - 431
Target Start/End: Original strand, 84027 - 84131
Alignment:
Q  337 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||||          |||||||||||||||||||||||||||||| ||||||||||||    
T  84027 gaatatcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatatatccgatgtgg 84126  T
Q  427 gacta 431  Q
    |||||    
T  84127 gacta 84131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 2471680 - 2471790
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||| |||||||||| ||||||||||| |||||||||||| |||||||||||          ||||||||||||||||||||| || ||||||||||||    
T  2471680 tgtaaggaatatcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaaaaaccctatctatccg 2471779  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  2471780 atgtgggacta 2471790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 29396330 - 29396440
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||||||||          ||||||||||||| ||||||||| ||||||||||| |    
T  29396330 tgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtacggtgaggagtgcctcctctttataaacttttctcaagattcctatctatctg 29396429  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  29396430 atgtgggacta 29396440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 22196317 - 22196423
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    ||||||||||||||||||||||||  ||||||||||| || ||||||||          ||||||||||||||||||||||| | |||||||||||||||    
T  22196317 acgaatatcgaggcctaactcatccttacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagagtactatctatccgatgt 22196416  T
Q  425 gggacta 431  Q
    |||||||    
T  22196417 gggacta 22196423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 38131818 - 38131771
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38131818 ctctttataaactcttctcaagagtcctatctatccgatgtgggacta 38131771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 385 - 431
Target Start/End: Original strand, 14769883 - 14769929
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  14769883 tctttataaactcttctcaagaatcctatctatccgatgtgagacta 14769929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 22196550 - 22196650
Alignment:
Q  341 atcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||| |||||||||||||  ||||||||||| |||||||||||          ||||||||||||||||||||||| || ||||||||||||||||||||    
T  22196550 atcggggcctaactcatccttacaaaaccggcttgtacggtgatgagtgtctcctctttataaactcttctcaagagtcatatctatccgatgtgggact 22196649  T
Q  431 a 431  Q
    |    
T  22196650 a 22196650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 873746 - 873793
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  873746 ctctctataaactcttctcaagagtcctatctatccgatgtgggacta 873793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 1028143 - 1028190
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  1028143 ctctttataaactcttctcaagagtgctatctatccgatgtgggacta 1028190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 19439914 - 19439867
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  19439914 ctctttataaattcttctcaagaatcctatctatctgatgtgggacta 19439867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 431
Target Start/End: Complemental strand, 33040331 - 33040292
Alignment:
Q  392 aaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33040331 aaactcttctcaagaatcctatctatccgatgtgggacta 33040292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 37995684 - 37995731
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  37995684 ctctttataaactcttctcaagagtgctatctatccgatgtgggacta 37995731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 39668467 - 39668514
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||    
T  39668467 ctctttataaattcttctcaagaatcatatctatccgatgtgggacta 39668514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 385 - 431
Target Start/End: Complemental strand, 27760128 - 27760082
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  27760128 tctttagaaactcttctcaagagtcctatctatccgatgtgggacta 27760082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 30870935 - 30870977
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  30870935 ctctttataaactcttctcaagaatcttatctatccgatgtgg 30870977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 35527038 - 35527084
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  35527038 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 35527084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 38376785 - 38376739
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  38376785 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 38376739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 43490306 - 43490352
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  43490306 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 43490352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 3762960 - 3762915
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    ||||||||||||||||||||||| || |||||||||||||||||||    
T  3762960 ctctttataaactcttctcaagagtcttatctatccgatgtgggac 3762915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 431
Target Start/End: Complemental strand, 33040518 - 33040477
Alignment:
Q  390 ataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  33040518 ataaactcttctcaagaatcctatctatctgatgtgggacta 33040477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 24792254 - 24792363
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga-------ctctt--tataaactcttctcaagaatcctatctatccga 421  Q
    |||||||||||||||||||||| |||||   |||||||||| ||||| |||||       ||| |  |||||||||||||||||| ||||||||||||||    
T  24792254 tgtaacgaatatcgaggcctaaatcatccccacaaaaccggtttgtaaggtgaggagtgcctcctcttataaactcttctcaagattcctatctatccga 24792353  T
Q  422 tgtgggacta 431  Q
    | ||||||||    
T  24792354 tatgggacta 24792363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 395418 - 395375
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||    
T  395418 tttataaactcttatcaagaatcctatctatccaatgtgggact 395375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 13843751 - 13843704
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  13843751 ctctttataaactcttctcaagagtactatctatctgatgtgggacta 13843704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 13844067 - 13844020
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  13844067 ctctttataaactcttctcaagagtactatctatcagatgtgggacta 13844020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 48154 - 48200
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  48154 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 48200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 15510554 - 15510600
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  15510554 ctctttataaactcttctcaagagtcgtgtctatccgatgtgggact 15510600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 431
Target Start/End: Original strand, 28009848 - 28009894
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||||    
T  28009848 tctttataaactcttctcaagagttctatctatctgatgtgggacta 28009894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 28358085 - 28358131
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  28358085 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 28358131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 30330180 - 30330068
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatcta--tacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatc 418  Q
    ||||||||||||||||||||||||||| |   | ||||||||| |||||||||||          ||||||||| |||||||||||||||| |||||||     
T  30330180 tgtaacgaatatcgaggcctaactcatatccttgcaaaaccggcttgtacggtgaggagtgcctcctctttatatactcttctcaagaatcatatctatt 30330081  T
Q  419 cgatgtgggacta 431  Q
    | |||||||||||    
T  30330080 caatgtgggacta 30330068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 34457357 - 34457311
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  34457357 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 34457311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 43490513 - 43490559
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  43490513 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 43490559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 385 - 430
Target Start/End: Complemental strand, 11632484 - 11632439
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||||||||| || | ||||||||||||||||||    
T  11632484 tctttataaactcttctcaagagtcttgtctatccgatgtgggact 11632439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 9850527 - 9850483
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||    
T  9850527 ctctatataaactcttatcaagaatcctatctatccaatgtggga 9850483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 29432466 - 29432419
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||| ||||||||| || |||||||||||    
T  29432466 ctctttataaactcttatcaagagtcctatctaaccaatgtgggacta 29432419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 30588111 - 30588064
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||| | ||||||| ||||||||||||||    
T  30588111 ctctttataaactcttatcaagagttctatctaaccgatgtgggacta 30588064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 39268069 - 39268026
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||| |||||| || ||||||||||||||||||||    
T  39268069 tttataaactcttatcaagagtcttatctatccgatgtgggact 39268026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 2908612 - 2908658
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||| ||||||||| || | ||||||||||||||||||    
T  2908612 ctctttataaactattctcaagagtcttgtctatccgatgtgggact 2908658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 13413638 - 13413592
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || |||||||  |||||||||||    
T  13413638 ctctttataaactcttctcaagagtcttatctatttgatgtgggact 13413592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 17135573 - 17135527
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||| |||||| || ||| ||||||||||||||||    
T  17135573 ctctttataaactcttatcaagagtcttatttatccgatgtgggact 17135527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 422
Target Start/End: Complemental strand, 18541776 - 18541738
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgat 422  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  18541776 ctctttataaactattctcaagaatcttatctatccgat 18541738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 18541991 - 18541957
Alignment:
Q  397 cttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||| |||||    
T  18541991 cttctcaagaatcctatctatccgatgtgagacta 18541957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 24792111 - 24792161
Alignment:
Q  333 taacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga 383  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||    
T  24792111 taacgaatatcgaggtctaactcattcttacaaaaccggcttgtacggtga 24792161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 34457150 - 34457104
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||    
T  34457150 ctctttataaactcttctcaagagtcttgtctatccgatatgggact 34457104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 392 - 430
Target Start/End: Original strand, 35527199 - 35527237
Alignment:
Q  392 aaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  35527199 aaactcttctcaagagtcttatctatccgatgtgggact 35527237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 37656782 - 37656828
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||||||| ||||    
T  37656782 ctctttatatactcttctcaagagtcttatctatccgatgtgagact 37656828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 37781894 - 37781940
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||||||| ||||    
T  37781894 ctctttatatactcttctcaagagtcttatctatccgatgtgagact 37781940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 40169091 - 40169137
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || |||||||| |||||||||||    
T  40169091 ctctttatatactcttctcaagagtcttatctatctgatgtgggact 40169137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 33040587 - 33040535
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga 383  Q
    ||||||||||||||||||||| || |||  ||||||||||| ||||| |||||    
T  33040587 tgtaacgaatatcgaggcctaccttatccttacaaaaccggcttgtaaggtga 33040535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 5e-23; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 431
Target Start/End: Complemental strand, 11290282 - 11290176
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||          ||||||||||||||||||||||| |||||||||||||||||    
T  11290282 acgaatattgaggcctaactcatccatacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatctatccgatgt 11290183  T
Q  425 gggacta 431  Q
    |||||||    
T  11290182 gggacta 11290176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 46528914 - 46529020
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||          ||||||||||||||||||||||||||| |||||||||||||    
T  46528914 acgaatatcgaggcctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatccaatctatccgatgt 46529013  T
Q  425 gggacta 431  Q
    | |||||    
T  46529014 gagacta 46529020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 50868004 - 50868110
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    |||||||| ||||||| ||||||| |||||||||||| |||||||||||          ||||||||||||||||||||||| |||||||||||||||||    
T  50868004 acgaatattgaggcctgactcatccatacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatctatccgatgt 50868103  T
Q  425 gggacta 431  Q
    |||||||    
T  50868104 gggacta 50868110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 431
Target Start/End: Complemental strand, 2016650 - 2016539
Alignment:
Q  330 gtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatcc 419  Q
    ||||||||||| ||||||||||||||| || ||||||| ||| || ||||||||          |||||||||||||||||||||||||||||||||||     
T  2016650 gtgtaacgaatgtcgaggcctaactcaactctacaaaatcggcttatacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatct 2016551  T
Q  420 gatgtgggacta 431  Q
    |||||| |||||    
T  2016550 gatgtgagacta 2016539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 431
Target Start/End: Complemental strand, 4026124 - 4026080
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  4026124 tttataaactcttctcaagaatcctatctatccgatgtgggacta 4026080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 33912160 - 33912050
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||| |||||||||||||||||||||  ||||||||||| || ||| ||||          |||||||||||||||||||||| |||||||||| |||    
T  33912160 tgtaacaaatatcgaggcctaactcatccttacaaaaccggcttatacagtgaggagtgcctcctctttataaactcttctcaagtatcctatctacccg 33912061  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  33912060 atgtgggacta 33912050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 51469535 - 51469488
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51469535 ctctttataaactcttctcaagagtcctatctatccgatgtgggacta 51469488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 37288922 - 37288966
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  37288922 tttataaactcttctcaagaatcatatctatccgatgtgggacta 37288966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 15665207 - 15665160
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  15665207 ctctatataaactcttctcaagagtcctatctatccgatgtgggacta 15665160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 22867138 - 22867091
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  22867138 ctctttataaactcttctcaagagtcctatctatccgacgtgggacta 22867091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 29669413 - 29669460
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  29669413 ctctttataaactcttctcaagagtgctatctatccgatgtgggacta 29669460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 37097781 - 37097828
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  37097781 ctctttataaaatcttctcaagaatcctatctatctgatgtgggacta 37097828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 431
Target Start/End: Complemental strand, 51470533 - 51470490
Alignment:
Q  388 ttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  51470533 ttataaactcttctcaagagtcctatctatccgatgtgggacta 51470490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 52810675 - 52810722
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  52810675 ctctttataaactcttctcaagaatcttatctatccgatgtaggacta 52810722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 53740236 - 53740189
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  53740236 ctctttataaactcttctcaagagtactatctatccgatgtgggacta 53740189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 43943727 - 43943681
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  43943727 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 43943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 49544386 - 49544344
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  49544386 ctctttataaactcttctcaagaatcttatctatccgatgtgg 49544344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 43798183 - 43798224
Alignment:
Q  390 ataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  43798183 ataaactcttctcaagaatcctatatatccgatgtgggacta 43798224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 36558515 - 36558563
Alignment:
Q  383 actctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||| | || |||||||||||||||||||||    
T  36558515 actctttataaactcttctcaaaagtcatatctatccgatgtgggacta 36558563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 387 - 431
Target Start/End: Complemental strand, 47845839 - 47845795
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  47845839 tttataaactcttctcaagaaacctatctatccgacgtgggacta 47845795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 990601 - 990554
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||    
T  990601 ctctttataaactcttctcaagagtgttatctatccgatgtgggacta 990554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 29669728 - 29669775
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  29669728 ctctttataaactcttctcaagagtgctatctatctgatgtgggacta 29669775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 43972409 - 43972362
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  43972409 ctctttatcaacttttctcaagagtcctatctatccgatgtgggacta 43972362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 427
Target Start/End: Original strand, 45426986 - 45427029
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggg 427  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  45426986 ctctttataaactcttctcaagagtactatctatccgatgtggg 45427029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 50858382 - 50858335
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  50858382 ctctttataaactcttctcaagagtactatctatctgatgtgggacta 50858335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 53739920 - 53739873
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  53739920 ctctttataaactcttctcaagagtactatctatccgatatgggacta 53739873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 56509663 - 56509616
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  56509663 ctctttataaactcttctcaagggtcctatctatccgatgtaggacta 56509616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 5488421 - 5488375
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||||    
T  5488421 ctctttataaactcttctcaagagtcttatttatccgatgtgggact 5488375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 12016733 - 12016779
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  12016733 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 12016779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 12016941 - 12016987
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  12016941 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 12016987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 431
Target Start/End: Complemental strand, 13254436 - 13254390
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||    
T  13254436 tctttataaactcttctcaatagtcctatctatccaatgtgggacta 13254390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 27634376 - 27634422
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||    
T  27634376 ctctttatatactcttctcaagagtcttatctatccgatgtgggact 27634422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 28497264 - 28497310
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||| |||||| || ||||||||||||||||||||    
T  28497264 ctctttataaactcttatcaagagtcttatctatccgatgtgggact 28497310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 39110961 - 39110915
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||    
T  39110961 ctctttatatactcttctcaagagtcttatctatccgatgtgggact 39110915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 49380930 - 49380976
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||    
T  49380930 ctctttataaactcttctcaagagtcttatctatccgatgtgagact 49380976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 431
Target Start/End: Complemental strand, 50858065 - 50858019
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||| ||||||||||| | ||||||||||||||||||||||    
T  50858065 tctttataaaatcttctcaagagtactatctatccgatgtgggacta 50858019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 384 - 429
Target Start/End: Original strand, 1923041 - 1923086
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||    
T  1923041 ctctttataaactcttctcaagagtcttatctatctgatgtgggac 1923086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 384 - 425
Target Start/End: Complemental strand, 23018524 - 23018483
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtg 425  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  23018524 ctctttataaactcttctcaagagtcatatctatccgatgtg 23018483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 29113503 - 29113458
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||    
T  29113503 ctctttataaactcttctcaagagtcttatctatctgatgtgggac 29113458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 384 - 421
Target Start/End: Complemental strand, 35269065 - 35269028
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccga 421  Q
    |||||||||||||||||||||||||| |||||||||||    
T  35269065 ctctttataaactcttctcaagaatcttatctatccga 35269028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 50307328 - 50307284
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||| |||||| || ||||||||||||||||||||    
T  50307328 ctttataaactcttgtcaagagtcttatctatccgatgtgggact 50307284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 431
Target Start/End: Complemental strand, 991254 - 991211
Alignment:
Q  388 ttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||| |  |||||||||||||||||||||    
T  991254 ttataaactcttctcaagagtgttatctatccgatgtgggacta 991211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 427
Target Start/End: Complemental strand, 5427182 - 5427139
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggg 427  Q
    ||||||||||||||||||||| |||| ||||||||| |||||||    
T  5427182 ctctttataaactcttctcaaaaatcttatctatccaatgtggg 5427139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 26941915 - 26941868
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||| ||||||||||||||||| || |||||||| |||||||||||||    
T  26941915 ctctatataaactcttctcaaggatactatctattcgatgtgggacta 26941868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 27048458 - 27048505
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||  ||||||||| ||||||||||||||    
T  27048458 ctctttataaactcttatcaagcttcctatctaaccgatgtgggacta 27048505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 29734615 - 29734568
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||  |||||||||||| | ||||||||||||||||||||||||    
T  29734615 ctctttaataactcttctcaaaagtcctatctatccgatgtgggacta 29734568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 428
Target Start/End: Original strand, 33797160 - 33797203
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||    
T  33797160 tctttataaactcttatcaagagtcctatctatccaatgtggga 33797203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 43972093 - 43972046
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||| |||||||||||||| |||||||||||| | |||||||||    
T  43972093 ctctttatcaactcttctcaagagtcctatctatccaacgtgggacta 43972046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 48843067 - 48843114
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||| ||||||||||| |||| |||||||    
T  48843067 ctctttataaactcttttcaagagtcctatctatctgatgcgggacta 48843114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 52810902 - 52810949
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||| | ||||||||||||||||| | |||||||||||||||||||    
T  52810902 ctctttttgaactcttctcaagaatcttttctatccgatgtgggacta 52810949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 53738258 - 53738305
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| || ||||||| | |||||||||||    
T  53738258 ctctttataaactcttctcaagagtcttatctattctatgtgggacta 53738305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 991091 - 991049
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    ||||||||||||||||||||||| | |||||||||||| ||||    
T  991091 ctctttataaactcttctcaagagtgctatctatccgacgtgg 991049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 3055837 - 3055791
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||  |||||| |||||||||||| ||||||||||    
T  3055837 ctctttataaactctcatcaagagtcctatctatccaatgtgggact 3055791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 4905555 - 4905601
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||| ||||||||    
T  4905555 ctctttatacactcttctcaagagtcttatctatccgacgtgggact 4905601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 7198036 - 7198082
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||| |||||| || ||||||||| ||||||||||    
T  7198036 ctctttataaactcttatcaagagtcttatctatccaatgtgggact 7198082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 21498585 - 21498539
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || | ||||||||||||||||||    
T  21498585 ctctttatatactcttctcaagagtcttgtctatccgatgtgggact 21498539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 21647631 - 21647677
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||| ||||| |||||| || ||||||||||||||||||||    
T  21647631 ctctttataacctcttatcaagagtcatatctatccgatgtgggact 21647677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 25753655 - 25753701
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||| |||||| || | ||||||||||||||||||    
T  25753655 ctctttataaactcttatcaagagtcttgtctatccgatgtgggact 25753701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 430
Target Start/End: Complemental strand, 26806561 - 26806519
Alignment:
Q  388 ttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||| |||||| ||||||||||||||| |||||||    
T  26806561 ttataaactcttatcaagagtcctatctatccgatttgggact 26806519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 52827282 - 52827328
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||| |||||| |||||||||||| ||||| ||||    
T  52827282 ctctttataaactcttatcaagagtcctatctatccaatgtgagact 52827328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 54210431 - 54210385
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || | ||||||||||||||||||    
T  54210431 ctctttatatactcttctcaagagtcttgtctatccgatgtgggact 54210385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 425
Target Start/End: Complemental strand, 4645906 - 4645865
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtg 425  Q
    ||||||||| ||||||||||||| || |||||||||||||||    
T  4645906 ctctttatatactcttctcaagagtcttatctatccgatgtg 4645865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Original strand, 8560026 - 8560067
Alignment:
Q  389 tataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||| |||||| || ||||||||||||||||||||    
T  8560026 tataaactcttatcaagagtcttatctatccgatgtgggact 8560067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 368
Target Start/End: Complemental strand, 42901924 - 42901887
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaac 368  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  42901924 tgtaacgaatatcgaggtctaactcatccatacaaaac 42901887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 49380714 - 49380669
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    ||||||||||||||||||||||| || ||||||||| |||| ||||    
T  49380714 ctctttataaactcttctcaagagtcttatctatccaatgtaggac 49380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 9758358 - 9758314
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    |||| ||||||||||| |||||| || ||||||||||||||||||    
T  9758358 ctctatataaactcttatcaagagtcttatctatccgatgtggga 9758314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 53559357 - 53559401
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||| ||||||||||||| |  ||||||||||||||||||||    
T  53559357 ctttatatactcttctcaagagttttatctatccgatgtgggact 53559401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 5e-23; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 24453895 - 24453785
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||||||||          || ||||||||||||||||||||| ||||||||||||    
T  24453895 tgtaacgaatatcgagacctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctgtttataaactcttctcaagaaccctatctatccg 24453796  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  24453795 atgtgggacta 24453785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 48511401 - 48511507
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    |||||||| ||||||||||||||||| |||||||||| |||||||||||          ||||||||||||||||||||||| |||||||||||||||||    
T  48511401 acgaatattgaggcctaactcatctagacaaaaccggcttgtacggtgaggaatgcctcctctttataaactcttctcaagattcctatctatccgatgt 48511500  T
Q  425 gggacta 431  Q
    |||||||    
T  48511501 gggacta 48511507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 48511630 - 48511736
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||          ||||||||||||||||||||||| |||||||||||||||||    
T  48511630 acgaatattgaggcctaactcatccatacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagattcctatctatccgatgt 48511729  T
Q  425 gggacta 431  Q
    |||||||    
T  48511730 gggacta 48511736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 10450639 - 10450745
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    ||||||||||||||||||||||||   |||||||||| |||||||||||          |||||||||||||||||||||||| ||||||||||||||||    
T  10450639 acgaatatcgaggcctaactcatccccacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgt 10450738  T
Q  425 gggacta 431  Q
    |||||||    
T  10450739 gggacta 10450745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 431
Target Start/End: Original strand, 15820602 - 15820702
Alignment:
Q  341 atcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||  ||||||||||| |||||||||||          ||| |||||||||||||||||||||||||||||||||||||||||||    
T  15820602 atcgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgtctcctcgttataaactcttctcaagaatcctatctatccgatgtgggact 15820701  T
Q  431 a 431  Q
    |    
T  15820702 a 15820702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 9180485 - 9180375
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||| |||||||||||||||||| |||  ||||||||| | |||||||||||          ||||||||||||| |||||||||||||||||||||||    
T  9180485 tgtaatgaatatcgaggcctaactgatccttacaaaaccagcttgtacggtgaggagtgtctcctctttataaacttttctcaagaatcctatctatccg 9180386  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  9180385 atgtgggacta 9180375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 431
Target Start/End: Original strand, 11244536 - 11244638
Alignment:
Q  339 atatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    |||||||| |||||||||||  ||||||||||| |||||||||||          |||||||||||||||||||||||| ||||||||||||||||||||    
T  11244536 atatcgagacctaactcatccttacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccgatgtggga 11244635  T
Q  429 cta 431  Q
    |||    
T  11244636 cta 11244638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 428
Target Start/End: Original strand, 42190462 - 42190570
Alignment:
Q  329 agtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga-------ctc--tttataaactcttctcaagaatcctatctatcc 419  Q
    |||||||||||||||||||||||||||||| ||| |||| ||| |||||||||||       |||   ||||||||||||||||||| ||||||||||||    
T  42190462 agtgtaacgaatatcgaggcctaactcatccatataaaatcggtttgtacggtgaagagtgcctcctcttataaactcttctcaagattcctatctatcc 42190561  T
Q  420 gatgtggga 428  Q
    |||||||||    
T  42190562 gatgtggga 42190570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 53966287 - 53966240
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53966287 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 53966240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 51734606 - 51734654
Alignment:
Q  383 actctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51734606 actccttataaactcttctcaagaatcctatctatccgatgtgggacta 51734654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 10450415 - 10450521
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    ||||||||||||||||||||||||   |||||||| | |||||||||||          ||| |||||||||||||||||||| ||||||||||||||||    
T  10450415 acgaatatcgaggcctaactcatccccacaaaaccagcttgtacggtgaggagtgcctcctcgttataaactcttctcaagaaacctatctatccgatgt 10450514  T
Q  425 gggacta 431  Q
    |||||||    
T  10450515 gggacta 10450521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 22666368 - 22666415
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  22666368 ctctttataaactcttctcaagaatcctatctatccgacgtgggacta 22666415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 54369093 - 54369046
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54369093 ctctttataaactcttctcaagagtcctatctatccgatgtgggacta 54369046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 5321586 - 5321633
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  5321586 ctctttataaactcttttcaaaaatcctatctatccgatgtgggacta 5321633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 9178961 - 9178914
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||    
T  9178961 ctctttataaactcttcttaagaatcctatctatccgatatgggacta 9178914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 10453753 - 10453800
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  10453753 ctctttataaacccttctcaagaatcctatctatccgatctgggacta 10453800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 10856676 - 10856723
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  10856676 ctctttataaactcttttcaagaatcctatccatccgatgtgggacta 10856723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 27219383 - 27219336
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  27219383 ctctttataaactcttctcaagagtgctatctatccgatgtgggacta 27219336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 431
Target Start/End: Original strand, 40769903 - 40770009
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgt 424  Q
    |||||||| ||||||||||||||| |||||||||||| |||||| ||||          |||||||| |||||||| ||| |||| ||||||||||||||    
T  40769903 acgaatattgaggcctaactcatccatacaaaaccggcttgtacagtgaggagtgtctcctctttatgaactcttcacaataatcatatctatccgatgt 40770002  T
Q  425 gggacta 431  Q
    |||||||    
T  40770003 gggacta 40770009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 41380778 - 41380731
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  41380778 ctctttataaactcttctcaagagtgctatctatccgatgtgggacta 41380731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 43101421 - 43101468
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  43101421 ctctttataaactcttctcaagagtcctatctatctgatgtgggacta 43101468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 44573380 - 44573333
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  44573380 ctctttataaactcttctcaagagtactatctatccgatgtgggacta 44573333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 47833712 - 47833759
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  47833712 ctctttataaacacttctcaagagtcctatctatccgatgtgggacta 47833759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 4029694 - 4029740
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  4029694 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 4029740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 42258964 - 42258918
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||    
T  42258964 ctctttatatactcttctcaagaatcttatctatccgatgtgggact 42258918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 49477588 - 49477542
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  49477588 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 49477542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 54495585 - 54495539
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  54495585 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 54495539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 2800013 - 2800058
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||    
T  2800013 ctttataaactcatcttaagaatcctatctatccgatgtgggacta 2800058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 3985827 - 3985780
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||    
T  3985827 ctctttataaactcttctcaaaagtcatatctatccgatgtgggacta 3985780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 9179187 - 9179140
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||| ||||| | |||||||||||||||||||    
T  9179187 ctctttataaactcttctcatgaatcatgtctatccgatgtgggacta 9179140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 13769341 - 13769388
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||    
T  13769341 ctctttataaactcttctcaagagtgctatctatccaatgtgggacta 13769388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 16051522 - 16051632
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||| |||||||||| |||||||||||  ||||||||||| |||||||||||           ||||||||||||||||||||||||  ||| |||| |    
T  16051522 tgtaatgaatatcgagacctaactcatccttacaaaaccggcttgtacggtgaagaatgtctcatctttataaactcttctcaagaatattatatatctg 16051621  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  16051622 atgtgggacta 16051632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 16060872 - 16060982
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtgac----------tctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||| |||||||||| |||||||||||  ||||||||| | |||||||||||           ||||||||||||||||||||||||  ||| ||||||    
T  16060872 tgtaatgaatatcgagacctaactcatccttacaaaaccagcttgtacggtgaagagtgtctcatctttataaactcttctcaagaatattatatatccg 16060971  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  16060972 atgtgggacta 16060982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 34715505 - 34715552
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||| | | ||||||||||||||||||||||    
T  34715505 ctctttataaactcttctcaaaagtgctatctatccgatgtgggacta 34715552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 45443334 - 45443287
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||    
T  45443334 ctctttataaactcttctcaagagtgctatctatccaatgtgggacta 45443287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 48685367 - 48685414
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||||    
T  48685367 ctctttataaactcttctcaagagtactatatatccgatgtgggacta 48685414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 48837058 - 48837105
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  48837058 ctctatatatactcttctcaataatcctatctatccgatgtgggacta 48837105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 50203907 - 50203954
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| || ||||||||||||||| |||||    
T  50203907 ctctttataaactcttctcaagagtcttatctatccgatgtgagacta 50203954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 4191172 - 4191218
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  4191172 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 4191218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 9264136 - 9264182
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||    
T  9264136 ctctttatatactcttctcaagagtcttatctatccgatgtgggact 9264182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 9264550 - 9264596
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||    
T  9264550 ctctttatatactcttctcaagagtcttatctatccgatgtgggact 9264596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 22339795 - 22339749
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  22339795 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 22339749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 426
Target Start/End: Original strand, 24860111 - 24860153
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  24860111 ctctttataaactcttctcaagagtcctatttatccgatgtgg 24860153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 34992631 - 34992585
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||    
T  34992631 ctctttataaactcttctcaagagtcttatctatctgatgtgggact 34992585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 34992923 - 34992877
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||    
T  34992923 ctctttataaactcttctcaagagtcttatctatctgatgtgggact 34992877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 37223629 - 37223583
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||||||| || || ||||||||||||||||||||    
T  37223629 ctctttataaactcttctcaggagtcttatctatccgatgtgggact 37223583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 50692377 - 50692331
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  50692377 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 50692331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 51642685 - 51642731
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||    
T  51642685 ctctttatatactcttctcaagagtcttatctatccgatgtgggact 51642731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 16045423 - 16045467
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||    
T  16045423 tttataaactcttctcaagaatattatatatccgatgtgggacta 16045467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 29763746 - 29763790
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    |||||||||||||||| |||||| || ||||||||||||||||||    
T  29763746 ctctttataaactcttatcaagagtcttatctatccgatgtggga 29763790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 54591517 - 54591561
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||| || | ||||||||||||||||||    
T  54591517 ctttataaactcttctcaagagtcttgtctatccgatgtgggact 54591561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 4256288 - 4256241
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| |  |||| ||||||||||||||||    
T  4256288 ctctttataaactcttctcaagagtgttatccatccgatgtgggacta 4256241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 25627974 - 25628017
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||    
T  25627974 tttatatactcttctgaagaatcttatctatccgatgtgggact 25628017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 430
Target Start/End: Complemental strand, 26366782 - 26366739
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||||||| || | ||||||||||||||||||    
T  26366782 tttataaactcttctcaagagtcttgtctatccgatgtgggact 26366739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 42576345 - 42576298
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||  |||||| |||| ||||||||||||||||    
T  42576345 ctctttataaactcttcttgagaatcttatcaatccgatgtgggacta 42576298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 378
Target Start/End: Complemental strand, 53966370 - 53966323
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtac 378  Q
    ||||| |||||| ||||||||||||||| |||||||||||| ||||||    
T  53966370 tgtaatgaatattgaggcctaactcatccatacaaaaccggcttgtac 53966323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 5440631 - 5440589
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    ||||||||||||||||||||||| || | ||||||||||||||    
T  5440631 ctctttataaactcttctcaagagtcttgtctatccgatgtgg 5440589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 9264343 - 9264389
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || | ||||||||||||||||||    
T  9264343 ctctttatatactcttctcaagagtcttgtctatccgatgtgggact 9264389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 431
Target Start/End: Original strand, 10453944 - 10453982
Alignment:
Q  393 aactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  10453944 aactcttctcatgaatcctatttatccgatgtgggacta 10453982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 335 - 377
Target Start/End: Original strand, 10856617 - 10856659
Alignment:
Q  335 acgaatatcgaggcctaactcatctatacaaaaccggattgta 377  Q
    ||||||||||||||||||||||||  ||||||||||| |||||    
T  10856617 acgaatatcgaggcctaactcatccttacaaaaccggcttgta 10856659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 430
Target Start/End: Original strand, 21832745 - 21832787
Alignment:
Q  388 ttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||| || | ||||||||||||||||||    
T  21832745 ttataaactcttctcaagagtcttgtctatccgatgtgggact 21832787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 39078821 - 39078867
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||    
T  39078821 ctctttataaactcttctcaagagtcttgtctatccgatatgggact 39078867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 39956724 - 39956770
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | |||||| |||||||||||    
T  39956724 ctctttataaactcttctcaagagtcttgtctatctgatgtgggact 39956770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 42311267 - 42311221
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||| || ||| || |||||||||||||||||||||||    
T  42311267 ctctttataaacttttatcaggattcctatctatccgatgtgggact 42311221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 50692580 - 50692534
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||| |||||| || | ||||||||||||||||||    
T  50692580 ctctttataaactcttatcaagagtcttgtctatccgatgtgggact 50692534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 51338491 - 51338537
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || |||||||| |||||||||||    
T  51338491 ctctttatatactcttctcaagagtcttatctatctgatgtgggact 51338537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 53640222 - 53640268
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || |||||||| |||||||||||    
T  53640222 ctctttatatactcttctcaagagtcttatctatctgatgtgggact 53640268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 11414417 - 11414373
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||    
T  11414417 ctctttataaactcttctcaagagtcttat-tatccgatgtgggac 11414373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 39269554 - 39269509
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  39269554 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 39269509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 40926508 - 40926463
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  40926508 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 40926463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 40926757 - 40926712
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  40926757 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 40926712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 40927084 - 40927039
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  40927084 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 40927039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 10862045 - 10862155
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||||||||| |||| ||||||||||  ||||||||||| |||||||||||          |||||||||||||||||||||||||||||||||||||    
T  10862045 tgtaacgaatatggaggtctaactcatccttacaaaaccggcttgtacggtgatgagtgcctcctctttataaactcttctcaagaatcctatctatccg 10862144  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  10862145 atgtgggacta 10862155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 337 - 431
Target Start/End: Complemental strand, 936923 - 936819
Alignment:
Q  337 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    |||||||||||||||||||||||||||||||| || |||||||||||          ||||||||||||||||||||||| ||||||||||||||||||     
T  936923 gaatatcgaggcctaactcatctatacaaaactggcttgtacggtgaggagtgtctcctctttataaactcttctcaagattcctatctatccgatgtga 936824  T
Q  427 gacta 431  Q
    |||||    
T  936823 gacta 936819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 15962144 - 15962254
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||||||||| |||||||||||||||  ||||||||||| |||||||||||          ||||||||||||| ||||||||| |||||||||||||    
T  15962144 tgtaacgaatatagaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactattctcaagattcctatctatccg 15962243  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  15962244 atgtgggacta 15962254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 39420814 - 39420704
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||| ||||          ||||||||||||||||||||| | |||||||||||||    
T  39420814 tgtaacgaatatcgaggcctaactcatccgtacaaaaccggcttgtactgtgaggagtgcctcctctttataaactcttctcaaaattcctatctatccg 39420715  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  39420714 atgtgggacta 39420704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 431
Target Start/End: Original strand, 33532721 - 33532833
Alignment:
Q  329 agtgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatc 418  Q
    ||||| ||||||||| || ||||||||| |  ||||||||||| |||||||||||          |||||||||||||||||||||||||||||||||||    
T  33532721 agtgtcacgaatatcaagacctaactcaaccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaactcttctcaagaatcctatctatc 33532820  T
Q  419 cgatgtgggacta 431  Q
    |||||||||||||    
T  33532821 cgatgtgggacta 33532833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 4506090 - 4506137
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4506090 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 4506137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 10862423 - 10862313
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||||||||||||||||||||||| || |||||||| || |||||||||||          |||||||||||||||||| || |||| ||||||||||    
T  10862423 tgtaacgaatatcgaggcctaactcacctttacaaaactggcttgtacggtgatgagtgtctcctctttataaactcttctaaaaaatcttatctatccg 10862324  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  10862323 atgtgggacta 10862313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 11350174 - 11350284
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||| || ||||||||||| |||||||||||| || ||||||||          |||||||||||||||||||||||| ||||||||||||    
T  11350174 tgtaacgaatatcaagacctaactcatccatacaaaaccggcttttacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccg 11350273  T
Q  421 atgtgggacta 431  Q
    || ||||||||    
T  11350274 atatgggacta 11350284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 32810863 - 32810973
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||   |||||||||| ||||| |||||          |||||||||||||||| ||||||||||||||||||||    
T  32810863 tgtaacgaatatcgaggcctaactcatccccacaaaaccggcttgtaaggtgatgattgtctcctctttataaactcttatcaagaatcctatctatccg 32810962  T
Q  421 atgtgggacta 431  Q
    ||| |||||||    
T  32810963 atgcgggacta 32810973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 11349843 - 11349890
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  11349843 ctctttataaactcttctcaagaaacctatctatccgatgtgggacta 11349890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 15961787 - 15961897
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||||||||| |||||||||||||||  ||||||||||| |||||||||||          |||||||||||   ||||||||| |||||||||||||    
T  15961787 tgtaacgaatattgaggcctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctctttataaaagattctcaagattcctatctatccg 15961886  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  15961887 atgtgggacta 15961897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 431
Target Start/End: Complemental strand, 17325281 - 17325177
Alignment:
Q  337 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    ||||||||||||||||||||||  ||||||||||| |||||| ||||          ||||||||||| |||||| |||||||||||||||| |||||||    
T  17325281 gaatatcgaggcctaactcatccttacaaaaccggcttgtacagtgaagagtgcctcctctttataaattcttcttaagaatcctatctatcagatgtgg 17325182  T
Q  427 gacta 431  Q
    |||||    
T  17325181 gacta 17325177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 28193388 - 28193432
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  28193388 tttataaactcttctcaagaatcctatctatccgatgtgagacta 28193432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 3976521 - 3976568
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||    
T  3976521 ctctttataaactcttctcaagaatattatctatccgatgtgggacta 3976568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 3977053 - 3977100
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  3977053 ctctttataaactcttctcaagagtactatctatccgatgtgggacta 3977100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 14280334 - 14280287
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  14280334 ctctttataaactcttctcatgaatcctatctatccaatgtgggacta 14280287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 28193625 - 28193672
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  28193625 ctctttataaaatcttctcaagaatcctatctatctgatgtgggacta 28193672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 43169296 - 43169249
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  43169296 ctctttataaactcttctcaagagtactatctatccgatgtgggacta 43169249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 883651 - 883697
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  883651 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 883697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 6986466 - 6986512
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  6986466 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 6986512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 12419892 - 12419846
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  12419892 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 12419846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 12431952 - 12431906
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  12431952 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 12431906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 12432159 - 12432113
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  12432159 ctctttataaactcttctcaagattcttatctatccgatgtgggact 12432113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 17727458 - 17727412
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  17727458 ctctttataaactcttctcaagagtcttatctatccgatgtgggact 17727412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 385 - 431
Target Start/End: Original strand, 30166130 - 30166176
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||    
T  30166130 tctttataaactcttctcaagagtgctatctatccgatgtgggacta 30166176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 337 - 431
Target Start/End: Original strand, 36161340 - 36161444
Alignment:
Q  337 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatc-tatccgatgtg 425  Q
    |||||||||| |||||||||||  ||||||||||| |||||||||||          |||||| |||||||||||||||||||||||| |||||||||||    
T  36161340 gaatatcgagacctaactcatccctacaaaaccggcttgtacggtgaggagtgcctcctcttt-taaactcttctcaagaatcctatcttatccgatgtg 36161438  T
Q  426 ggacta 431  Q
    ||||||    
T  36161439 ggacta 36161444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 429
Target Start/End: Original strand, 27545166 - 27545211
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    ||||||||||||||||||||||| || |||||||||||||||||||    
T  27545166 ctctttataaactcttctcaagagtcttatctatccgatgtgggac 27545211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 6183416 - 6183460
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    ||||||||||||||||||||||| | |||||||||||||||||||    
T  6183416 ctctttataaactcttctcaagagtactatctatccgatgtggga 6183460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 425
Target Start/End: Original strand, 43688472 - 43688512
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtg 425  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  43688472 tctttataaactcttctcaagagtcctatctatccgatgtg 43688512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 388 - 431
Target Start/End: Original strand, 3976209 - 3976252
Alignment:
Q  388 ttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||| | ||||||||||||||||||||||    
T  3976209 ttataaactcttctcaagagtactatctatccgatgtgggacta 3976252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 4342308 - 4342355
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  4342308 ctctttattaactctcctcaagaattctatctatccgatgtgggacta 4342355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 10861884 - 10861931
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||||    
T  10861884 ctctttataaactcttctcaagaatcctatatatccaatatgggacta 10861931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 11969106 - 11969059
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||    
T  11969106 ctctttataaactcttctcaagagtactatctatccgacgtgggacta 11969059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 18901914 - 18901961
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||    
T  18901914 ctctttataaactcttttcaagagtcttatctatccgatgtgggacta 18901961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 21213935 - 21213982
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||    
T  21213935 ctctttataaactcttctcaagagtactatctatccaatgtgggacta 21213982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 25441750 - 25441703
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  25441750 ctctttataaactcttctcaagagtactatctatctgatgtgggacta 25441703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 29695388 - 29695435
Alignment:
Q  383 actctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||||||||||| || ||||||||||||||| ||||    
T  29695388 actctttataaactcttctcaagagtcttatctatccgatgtgagact 29695435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 43195838 - 43195791
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  43195838 ctctttataaactcttctcaagagtactatctatctgatgtgggacta 43195791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 44266358 - 44266405
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||||||    
T  44266358 ctctttataaactcttctcaaaaatcttatctatctgatgtgggacta 44266405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 3435536 - 3435582
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||    
T  3435536 ctctgtataaactcttctcaagagtcttatctatccgatgtgggact 3435582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 19859979 - 19859933
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  19859979 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 19859933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 19860091 - 19860045
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  19860091 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 19860045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 20999039 - 20999085
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  20999039 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 20999085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 26847292 - 26847338
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||| |||||| |||||||||||| ||||||||||    
T  26847292 ctctttataaactcttatcaagagtcctatctatccaatgtgggact 26847338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 21734470 - 21734426
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||    
T  21734470 ctctttatatactcttctcaagagtcttatctatccgatgtggga 21734426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 30622126 - 30622162
Alignment:
Q  390 ataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    |||||||||||||||||||||||||||||||| ||||    
T  30622126 ataaactcttctcaagaatcctatctatccgaagtgg 30622162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 30624747 - 30624783
Alignment:
Q  390 ataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    |||||||||||||||||||||||||||||||| ||||    
T  30624747 ataaactcttctcaagaatcctatctatccgaagtgg 30624783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 390 - 426
Target Start/End: Original strand, 30665456 - 30665492
Alignment:
Q  390 ataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    |||||||||||||||||||||||||||||||| ||||    
T  30665456 ataaactcttctcaagaatcctatctatccgaggtgg 30665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 33986025 - 33986069
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||    
T  33986025 ctctttatatactcttctcaagagtcttatctatccgatgtggga 33986069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 42768384 - 42768429
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| |  |||||||||||||||||||||    
T  42768384 ctctttataaactcttctcaagagt--tatctatccgatgtgggacta 42768429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 7877898 - 7877851
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||| ||| | ||||||||||||||| ||||||    
T  7877898 ctctttataaactcttctcgagagtgctatctatccgatgtaggacta 7877851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 14288975 - 14288928
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||||||| ||| |||||||  ||||||||    
T  14288975 ctctttataaactcttctcaagaatcatatttatccgacatgggacta 14288928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 419
Target Start/End: Complemental strand, 14289180 - 14289145
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatcc 419  Q
    |||||||||||||||||||||||||| |||||||||    
T  14289180 ctctttataaactcttctcaagaatcttatctatcc 14289145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 21214251 - 21214298
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | |||||||||  |||||||||||    
T  21214251 ctctttataaactcttctcaagagtgctatctatctaatgtgggacta 21214298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 23054380 - 23054333
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| |  |||||||| ||||||||||||    
T  23054380 ctctttataaactcttctcaagagttatatctatctgatgtgggacta 23054333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 884111 - 884065
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| ||  |||||||||||||||||||    
T  884111 ctctttatatactcttctcaagagtctcatctatccgatgtgggact 884065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 7257658 - 7257704
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||| ||||||||| || |||||||||||| |||||||    
T  7257658 ctctttataaactattctcaagagtcttatctatccgatatgggact 7257704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 16007031 - 16006985
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || | ||||||||||||||||||    
T  16007031 ctctttatatactcttctcaagagtcttgtctatccgatgtgggact 16006985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 25621335 - 25621381
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || ||||||||||||||| ||||    
T  25621335 ctctttatatactcttctcaagagtcttatctatccgatgtgagact 25621381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 34775411 - 34775365
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||| ||||||||||| || | ||||||||||||||||||    
T  34775411 ctctttataaattcttctcaagagtcttgtctatccgatgtgggact 34775365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Original strand, 15820161 - 15820198
Alignment:
Q  394 actcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  15820161 actcttctcaagagtgctatctatccgatgtgggacta 15820198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 430
Target Start/End: Complemental strand, 31761181 - 31761140
Alignment:
Q  389 tataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||||| | || ||||||||||||||||||||    
T  31761181 tataaactcttctcaaaagtcttatctatccgatgtgggact 31761140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 39386724 - 39386679
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||| ||||||||||| |||||| || |||||||||||||||||||    
T  39386724 ctctatataaactcttatcaagagtcttatctatccgatgtgggac 39386679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 883902 - 883858
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||| || | |||||||||| |||||||    
T  883902 ctttataaactcttctcaagagtcttgtctatccgatatgggact 883858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 10570987 - 10570943
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||| ||||||||||||| || |||||||| |||||||||||    
T  10570987 ctttatatactcttctcaagagtcttatctatctgatgtgggact 10570943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 430
Target Start/End: Original strand, 33985829 - 33985865
Alignment:
Q  394 actcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||| || ||||||||||||||||||||    
T  33985829 actcttctcaagagtcttatctatccgatgtgggact 33985865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 385 - 425
Target Start/End: Original strand, 35249745 - 35249785
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtg 425  Q
    ||||||||||||||| |||||| ||||||||| ||||||||    
T  35249745 tctttataaactcttatcaagagtcctatctaaccgatgtg 35249785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 26842837 - 26842727
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||   |||||||| | |||||||||||          |||||||||||||||||||||||| ||||||||||||    
T  26842837 tgtaacgaatatcgaggcctaactcatccccacaaaaccagcttgtacggtgaggagtgcctcctctttataaactcttctcaagaaacctatctatccg 26842738  T
Q  421 atgtgggacta 431  Q
    |||||||||||    
T  26842737 atgtgggacta 26842727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 25184327 - 25184217
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    ||||||||||||||||||||||||||||   |||||||||| ||||| |||||          |||||||||||||||| ||||||||||||||||||||    
T  25184327 tgtaacgaatatcgaggcctaactcatccccacaaaaccggcttgtaaggtgaggattgcttcctctttataaactcttatcaagaatcctatctatccg 25184228  T
Q  421 atgtgggacta 431  Q
    ||| |||||||    
T  25184227 atgcgggacta 25184217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 33396361 - 33396314
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33396361 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 33396314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 8144071 - 8144024
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  8144071 ctctttataaactcttctcaagagtgctatctatccgatgtgggacta 8144024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 12134533 - 12134580
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  12134533 ctctttataaactcttctcaagagtgctatctatccgatgtgggacta 12134580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 16194074 - 16194027
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  16194074 ctctttataaactcttctaaagaatcctatatatccgatgtgggacta 16194027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 21067107 - 21067154
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  21067107 ctctttataaactcttctcaagaatgctatctatccgatatgggacta 21067154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 21088898 - 21088945
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  21088898 ctctttataaactcttctcaagaatgctatctatccgatatgggacta 21088945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 25184120 - 25184010
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||||| ||||||||||||||||| |||   |||||||||| |||||||||||          |||||||||||||||| ||||||||| ||||||||||    
T  25184120 tgtaacaaatatcgaggcctaacttatccccacaaaaccggcttgtacggtgaggattgtcttctctttataaactcttatcaagaatcttatctatccg 25184021  T
Q  421 atgtgggacta 431  Q
    ||| |||||||    
T  25184020 atgcgggacta 25184010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 26339892 - 26339939
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||    
T  26339892 ctctttataaactcttctcaagattcttatctatccgatgtgggacta 26339939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 27443587 - 27443634
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  27443587 ctctttataaactcttctcaagaatcctatctatctgatgtggtacta 27443634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 385 - 431
Target Start/End: Original strand, 24055160 - 24055206
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||    
T  24055160 tctttataaactcttctcaagagtgctatctatccgatgtgggacta 24055206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 384 - 426
Target Start/End: Complemental strand, 33396579 - 33396537
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgg 426  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  33396579 ctctttataaactcttctcaaaaatcctatctatccgatgtgg 33396537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 17096748 - 17096795
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| |||||||||| ||||||| |||||    
T  17096748 ctctttataaactcttctcaagactcctatctattcgatgtgagacta 17096795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 19753654 - 19753701
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| |||||||||| | |||||||||||    
T  19753654 ctctttataaactcttctcaagagtcctatctataccatgtgggacta 19753701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 21043831 - 21043878
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||||    
T  21043831 ctctttataaactcttctcaagagtgctatctatccgatatgggacta 21043878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 5269323 - 5269369
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||    
T  5269323 ctctttataaactcttctcaagagtcttatctatccgatgtgagact 5269369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 15101161 - 15101207
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  15101161 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 15101207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 16877060 - 16877106
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  16877060 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 16877106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 431
Target Start/End: Complemental strand, 19054546 - 19054500
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||    
T  19054546 tctttataaactcttctcaagagtgttatctatccgatgtgggacta 19054500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 431
Target Start/End: Original strand, 27577839 - 27577881
Alignment:
Q  389 tataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  27577839 tataaactcttctcaagaatcttatctatccgttgtgggacta 27577881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 425
Target Start/End: Complemental strand, 8427667 - 8427563
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccg 420  Q
    |||| ||||||||||||||||||||| |  ||||||||||  |||||||||||          |||||| ||||||||||||||||||| ||| ||||||    
T  8427667 tgtagcgaatatcgaggcctaactcaaccttacaaaaccgacttgtacggtgaggagtgcctcctctttctaaactcttctcaagaatcttatatatccg 8427568  T
Q  421 atgtg 425  Q
    |||||    
T  8427567 atgtg 8427563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 30539287 - 30539242
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||| |||||| || |||||||||||||||||||||    
T  30539287 ctttataaactcttatcaagagtcttatctatccgatgtgggacta 30539242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 6623477 - 6623521
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||| ||||||||||||| || ||||||||||||||||||||    
T  6623477 ctttatatactcttctcaagagtcttatctatccgatgtgggact 6623521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 384 - 428
Target Start/End: Original strand, 11313432 - 11313476
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtggga 428  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||    
T  11313432 ctctttatatactcttctcaagagtcttatctatccgatgtggga 11313476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 30718798 - 30718746
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga 383  Q
    |||||||||||||||| | ||||||||| | |||||||||| |||||||||||    
T  30718798 tgtaacgaatatcgagacttaactcatccacacaaaaccggcttgtacggtga 30718746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 1744892 - 1744939
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||| |||||| | |||||||||| |||||||||||    
T  1744892 ctctttataaactcttttcaagagtactatctatccaatgtgggacta 1744939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 10418388 - 10418435
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||||||||||||||  |||||| | ||||||||||||||||||||||    
T  10418388 ctctttataaactctcatcaagagtgctatctatccgatgtgggacta 10418435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 425
Target Start/End: Complemental strand, 13673966 - 13673868
Alignment:
Q  337 gaatatcgaggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtg 425  Q
    ||||||||| ||||||||||||  ||||||| ||| |||||||||||          ||| |||||||||||||||||||| |||||||||| ||||||    
T  13673966 gaatatcgaagcctaactcatcactacaaaatcggtttgtacggtgatgagggtctcctcattataaactcttctcaagaaacctatctatctgatgtg 13673868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 27311234 - 27311281
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    |||| ||||||||||||||||||||| |||||||||| |||| |||||    
T  27311234 ctctatataaactcttctcaagaatcttatctatccgttgtgcgacta 27311281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 385 - 431
Target Start/End: Original strand, 31924 - 31970
Alignment:
Q  385 tctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||| |||||| || |||||||||||||| ||||||    
T  31924 tctttataaactcttatcaagagtcttatctatccgatgttggacta 31970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 24558637 - 24558591
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||| ||||||||||||| || |||||||| |||||||||||    
T  24558637 ctctttatatactcttctcaagagtcttatctatctgatgtgggact 24558591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 431
Target Start/End: Original strand, 27582124 - 27582166
Alignment:
Q  389 tataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||  |||||||||| ||||||||||    
T  27582124 tataaactcttctcaagaattttatctatccgttgtgggacta 27582166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 421
Target Start/End: Original strand, 19712659 - 19712696
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccga 421  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  19712659 ctctttataaactcttctcaagagtgctatctatccga 19712696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 425
Target Start/End: Complemental strand, 24558842 - 24558801
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtg 425  Q
    |||||||||||||||||| |||| || |||||||||||||||    
T  24558842 ctctttataaactcttctaaagagtcttatctatccgatgtg 24558801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 28149847 - 28149802
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    |||||||||||||||| |||||| |  |||||||||||||||||||    
T  28149847 ctctttataaactcttatcaagagttttatctatccgatgtgggac 28149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 387 - 431
Target Start/End: Complemental strand, 16193703 - 16193659
Alignment:
Q  387 tttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||| || ||| ||||||||| ||||||||||||    
T  16193703 tttataaactcttctaaaaaattctatctatctgatgtgggacta 16193659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 30539472 - 30539428
Alignment:
Q  386 ctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||| |||| | || ||||||||||||||||||||    
T  30539472 ctttataaactcttatcaaaagtcttatctatccgatgtgggact 30539428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0785 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 3170 - 3217
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  3170 ctctttataaactcttctcaaaaattctatctatccgatgtgggacta 3217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 430
Target Start/End: Complemental strand, 76954 - 76860
Alignment:
Q  346 ggcctaactcatctatacaaaaccggattgtacggtga----------ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    |||||||||||||| ||||||||||| ||||| |||||          ||||||||||||||||||||||| || ||||||||||||||||||||    
T  76954 ggcctaactcatctttacaaaaccggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggact 76860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 165838 - 165791
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  165838 ctctttataaactcttctcaagaattctatctatccgatgtaggacta 165791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 43774 - 43727
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggacta 431  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  43774 ctctttataaactcttctcaagaatcctatctatctgatgtggtacta 43727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 34637 - 34746
Alignment:
Q  331 tgtaacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga-------ctctt--tataaactcttctcaagaatcctatctatccga 421  Q
    |||||||||||||||||||||| |||||   |||||||||| ||||| |||||       ||| |  |||||||||||||||||| ||||||||||||||    
T  34637 tgtaacgaatatcgaggcctaaatcatccccacaaaaccggtttgtaaggtgaggagtgcctcctcttataaactcttctcaagattcctatctatccga 34736  T
Q  422 tgtgggacta 431  Q
    | ||||||||    
T  34737 tatgggacta 34746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 383
Target Start/End: Original strand, 34494 - 34544
Alignment:
Q  333 taacgaatatcgaggcctaactcatctatacaaaaccggattgtacggtga 383  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||    
T  34494 taacgaatatcgaggtctaactcattcttacaaaaccggcttgtacggtga 34544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 2997 - 3043
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  2997 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 3043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 21313 - 21359
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||    
T  21313 ctctttataaactcttctcaagagtcttgtctatccgatgtgggact 21359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 384 - 429
Target Start/End: Complemental strand, 13360 - 13315
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggac 429  Q
    ||||||||||||||||||||||| || | |||||||||||||||||    
T  13360 ctctttataaactcttctcaagagtcttgtctatccgatgtgggac 13315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 13567 - 13521
Alignment:
Q  384 ctctttataaactcttctcaagaatcctatctatccgatgtgggact 430  Q
    ||||||||||||||||||||||| || | |||||||||| |||||||    
T  13567 ctctttataaactcttctcaagagtcttgtctatccgatttgggact 13521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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