View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7792_low_8 (Length: 397)

Name: NF7792_low_8
Description: NF7792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7792_low_8
NF7792_low_8
[»] chr4 (9 HSPs)
chr4 (1-337)||(30218997-30219333)
chr4 (131-372)||(40996168-40996409)
chr4 (132-372)||(35417322-35417561)
chr4 (127-265)||(6639352-6639491)
chr4 (196-255)||(19248432-19248491)
chr4 (179-291)||(5274248-5274361)
chr4 (175-291)||(46692751-46692868)
chr4 (196-291)||(22047200-22047296)
chr4 (228-291)||(4839749-4839812)
[»] chr8 (8 HSPs)
chr8 (131-337)||(24040001-24040206)
chr8 (179-374)||(16957944-16958137)
chr8 (134-252)||(1606594-1606712)
chr8 (175-301)||(36737463-36737589)
chr8 (196-291)||(22179963-22180059)
chr8 (179-291)||(27353563-27353676)
chr8 (179-291)||(27347483-27347596)
chr8 (179-291)||(28926756-28926869)
[»] chr1 (8 HSPs)
chr1 (132-337)||(16129000-16129204)
chr1 (176-363)||(39453390-39453577)
chr1 (132-301)||(13829594-13829763)
chr1 (130-214)||(432867-432951)
chr1 (179-291)||(16833362-16833475)
chr1 (179-291)||(38122649-38122762)
chr1 (196-291)||(12168788-12168884)
chr1 (2-131)||(26233239-26233370)
[»] chr3 (5 HSPs)
chr3 (131-337)||(45527009-45527214)
chr3 (196-291)||(8614977-8615073)
chr3 (196-291)||(52045495-52045591)
chr3 (196-301)||(52308595-52308701)
chr3 (179-291)||(27031399-27031512)
[»] chr7 (12 HSPs)
chr7 (132-376)||(31665104-31665347)
chr7 (178-291)||(2798153-2798267)
chr7 (1-131)||(19596602-19596734)
chr7 (196-301)||(22817892-22817998)
chr7 (179-291)||(7143094-7143207)
chr7 (179-291)||(10346918-10347031)
chr7 (196-291)||(22322496-22322592)
chr7 (179-301)||(19472862-19472985)
chr7 (225-291)||(2477164-2477230)
chr7 (178-291)||(31878057-31878171)
chr7 (234-291)||(45501243-45501300)
chr7 (1-131)||(19754600-19754732)
[»] chr5 (10 HSPs)
chr5 (175-337)||(30422222-30422384)
chr5 (1-131)||(36233777-36233908)
chr5 (175-252)||(34870321-34870398)
chr5 (179-291)||(14343928-14344041)
chr5 (179-291)||(30607793-30607906)
chr5 (179-290)||(11723889-11724001)
chr5 (179-291)||(9403756-9403869)
chr5 (179-291)||(34455630-34455743)
chr5 (179-290)||(24835195-24835307)
chr5 (225-301)||(33434090-33434166)
[»] chr6 (8 HSPs)
chr6 (132-301)||(15641714-15641883)
chr6 (139-301)||(26603622-26603784)
chr6 (132-212)||(5671728-5671808)
chr6 (179-291)||(26511113-26511226)
chr6 (179-291)||(26516229-26516342)
chr6 (175-248)||(31131319-31131392)
chr6 (132-212)||(24878406-24878486)
chr6 (179-301)||(9934587-9934710)
[»] scaffold0458 (1 HSPs)
scaffold0458 (176-363)||(10097-10284)
[»] scaffold0002 (1 HSPs)
scaffold0002 (132-291)||(354352-354512)
[»] chr2 (6 HSPs)
chr2 (132-212)||(27256909-27256989)
chr2 (175-255)||(36668488-36668568)
chr2 (179-307)||(29223150-29223279)
chr2 (179-307)||(29336449-29336578)
chr2 (35-112)||(35283338-35283415)
chr2 (178-291)||(32522421-32522535)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-131)||(8622-8752)
[»] scaffold1494 (1 HSPs)
scaffold1494 (196-291)||(1018-1114)
[»] scaffold0744 (1 HSPs)
scaffold0744 (175-301)||(1890-2016)


Alignment Details
Target: chr4 (Bit Score: 277; Significance: 1e-155; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 30219333 - 30218997
Alignment:
Q  1 ctatcgtggttttggttcatattggggagaggcataataaaaaatttgttttctcagattaatggttaaaccctattatatgtcttcaaagcatgtaatt 100  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||||||    
T  30219333 ctatggtggttttggttcatattggggaggggcataataaaaaatttgtttcctcagattggtggttaaaccctattatatgtcttcaaaacatgtaatt 30219234  T
Q  101 gcttgacttattgtaatgggcttcgagtacctgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagtt 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||| ||||| |||||    
T  30219233 tcttgacttattgtaatgggcttcgagtacctgataagtgctcaaaactgttataatttttatgttaaaataagcattttagtgacttgttctgcaagtt 30219134  T
Q  201 atctaaggaaaaacaatcaattgttgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaa 300  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30219133 atctaaggaaaaacaatcaattgttgtaatttcacaatttatgctttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaa 30219034  T
Q  301 acaactttccaaaccaagcaaaactcgcttaagcgag 337  Q
    |||||||||||||||||||||||||||||||||||||    
T  30219033 acaactttccaaaccaagcaaaactcgcttaagcgag 30218997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 131 - 372
Target Start/End: Complemental strand, 40996409 - 40996168
Alignment:
Q  131 ctgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgt-aagttatctaaggaaaaacaatcaattgttgtaa 229  Q
    ||||||||||||||||||| ||||  ||| | ||||||||||   |||||||| |||| || ||| ||||||||||||||||| |||||| || ||||||    
T  40996409 ctgataagtgctcaaaagtattatctttcatgtgttaaaataggtattttagtgacttgttttgtcaagttatctaaggaaaagcaatcatttattgtaa 40996310  T
Q  230 tttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaaacaactttccaaaccaagcaaaactcgct 329  Q
    ||| |||||||||| |||  |||||| || | |||||||||||||||| |||| |||||||| | ||||||||||  ||||||  |||||| ||||||||    
T  40996309 tttgaccatttatgctttcgatgccttacactactcaacttgtgcagg-aatggcaagcaaggaccaagaaacaagattccaagtcaagcagaactcgct 40996211  T
Q  330 taagcgagggtaattcgcttaagcgagaaagttctagggagca 372  Q
    ||||||||   ||||||||||||||||| ||||| ||||||||    
T  40996210 taagcgagaccaattcgcttaagcgagatagttccagggagca 40996168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 132 - 372
Target Start/End: Complemental strand, 35417561 - 35417322
Alignment:
Q  132 tgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatt 231  Q
    ||||||||||||||||||  |||  ||| | |||||||  |  ||||||||| |||| || || || |||||||||||||| |||||| |||||||||||    
T  35417561 tgataagtgctcaaaagtactatctttcatgtgttaaataaggcattttagtgacttgttttgcaaattatctaaggaaaagcaatcatttgttgtaatt 35417462  T
Q  232 tcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaaacaactttccaaaccaagcaaaactcgctta 331  Q
    | |||||||||| |||  |||||  || | |||||||||||||||| |||| |||||||| | ||||||||||  ||||||  |||||| ||||||||||    
T  35417461 tgaccatttatgctttcgatgccctacgctactcaacttgtgcagg-aatggcaagcaaggaccaagaaacaaggttccaagtcaagcagaactcgctta 35417363  T
Q  332 agcgagggtaattcgcttaagcgagaaagttctagggagca 372  Q
    |||||||  ||||| ||||||||||| |||| |||||||||    
T  35417362 agcgaggcaaattcacttaagcgagatagttatagggagca 35417322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 265
Target Start/End: Original strand, 6639352 - 6639491
Alignment:
Q  127 gtacctgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaacaatcaa-ttgtt 225  Q
    |||| |||||||||||||| |||  |||| ||| | ||||||  ||  |||||| || |||| || || ||||||||||||||||| | | ||| |||||    
T  6639352 gtacttgataagtgctcaagagtaatatatttcatgtgttaatttaggcattttggtgacttgttttgcaagttatctaaggaaaagctaccaacttgtt 6639451  T
Q  226 gtaatttcaccatttatgttttacatgcctcactccactc 265  Q
    ||||||| |||||||||| ||||||||||| |||| ||||    
T  6639452 gtaattttaccatttatgctttacatgccttactctactc 6639491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 19248491 - 19248432
Alignment:
Q  196 aagttatctaaggaaaaacaatcaattgttgtaatttcaccatttatgttttacatgcct 255  Q
    ||||||||||||||||| | ||||||||||| | ||| |||||||||| |||||||||||    
T  19248491 aagttatctaaggaaaatctatcaattgttgcatttttaccatttatgctttacatgcct 19248432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 5274361 - 5274248
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  |||||| | |||||||||| ||||||||||| | || || ||| || ||||||    
T  5274361 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtaatattaccatttatgctttacatgcctgattctacgcaatttatgcagg 5274262  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  5274261 aaatgacaagcaag 5274248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 46692868 - 46692751
Alignment:
Q  175 cattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtg 273  Q
    ||||||||| |||| || || ||||||||||||||||| | |||| |||  |||| ||  |||||||||| ||||||||||| | || || ||| || ||    
T  46692868 cattttagtgacttgttttgcaagttatctaaggaaaagctatcatttgagtgtatttataccatttatgctttacatgcctgattctacccaatttatg 46692769  T
Q  274 caggaaatgacaagcaag 291  Q
    ||||||||| ||||||||    
T  46692768 caggaaatgtcaagcaag 46692751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 22047200 - 22047296
Alignment:
Q  196 aagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaag 291  Q
    ||||||||||||||||| | | || |||  || ||||| |||||||||| ||||||||||| | || || ||| || ||||||||||||||||||||    
T  22047200 aagttatctaaggaaaagctaccatttgagtgcaattttaccatttatgctttacatgcctgattctacccaatttatgcaggaaatgacaagcaag 22047296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 291
Target Start/End: Complemental strand, 4839812 - 4839749
Alignment:
Q  228 aatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaag 291  Q
    ||||| |||||||||| ||||||||||| | || || ||| || ||||||||||||||||||||    
T  4839812 aattttaccatttatgctttacatgcctgattctacccaatttatgcaggaaatgacaagcaag 4839749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 8e-37; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 131 - 337
Target Start/End: Original strand, 24040001 - 24040206
Alignment:
Q  131 ctgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaat 230  Q
    ||||||||||||||||||| ||||  ||| | ||||||||||  ||||||||| |||| || |||||||||| ||||||||| |||||| ||||||||||    
T  24040001 ctgataagtgctcaaaagtattatctttcatgtgttaaaataggcattttagtgacttgttttgtaagttatataaggaaaagcaatcatttgttgtaat 24040100  T
Q  231 ttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaaacaactttccaaaccaagcaaaactcgctt 330  Q
    || |||||||||| |||  |||||| || | |||||||||||||||| |||| |||||||| | ||| ||| ||  ||||||  |||||| |||||||||    
T  24040101 ttgaccatttatgctttcgatgccttacactactcaacttgtgcagg-aatggcaagcaaggaccaataaataaggttccaagtcaagcagaactcgctt 24040199  T
Q  331 aagcgag 337  Q
    |||||||    
T  24040200 aagcgag 24040206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 179 - 374
Target Start/End: Original strand, 16957944 - 16958137
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagga 278  Q
    ||||| |||| || || |||||||||||| ||| | ||||| |||||||||||| | |||||||| |||  |||||| |||| |||||| ||||||| ||    
T  16957944 ttagtgacttgttttgcaagttatctaagaaaata-aatcatttgttgtaatttaagcatttatgctttcgatgccttactctactcaagttgtgcaaga 16958042  T
Q  279 aatgacaagcaagaaacaagaaacaactttccaaaccaagcaaaactcgcttaagcgagggtaattcgcttaagcgagaaagttctagggagcaac 374  Q
    | || |||||||| | |||| ||| |  |||||| ||||||| |||| ||||||| |||    |||||||||||||||||||||| ||||||||||    
T  16958043 a-tggcaagcaaggaccaagtaaccatgttccaagccaagcagaacttgcttaagagagatccattcgcttaagcgagaaagttccagggagcaac 16958137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 252
Target Start/End: Original strand, 1606594 - 1606712
Alignment:
Q  134 ataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatttc 233  Q
    ||||||||||||||||  |||| ||| | ||||||  ||  ||||||||| |||| ||||| |||||||||||| |||| |  |||||||||||| |||     
T  1606594 ataagtgctcaaaagtaatatatttcatgtgttaatttaggcattttagtgacttgttctgcaagttatctaagaaaaagctttcaattgttgtactttt 1606693  T
Q  234 accatttatgttttacatg 252  Q
    |||||||||||||||||||    
T  1606694 accatttatgttttacatg 1606712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 301
Target Start/End: Complemental strand, 36737589 - 36737463
Alignment:
Q  175 cattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgc 274  Q
    |||||| || |||| ||||| ||||||||||||||||  | |||||||||||||  |  |||||||||| ||||||||||| | || || ||| || |||    
T  36737589 cattttggtgacttgttctgcaagttatctaaggaaaggctatcaattgttgtatctataccatttatgctttacatgcctgattctacccaatttatgc 36737490  T
Q  275 aggaaatgacaagcaagaaacaagaaa 301  Q
    ||||||||||||||||| | |||||||    
T  36737489 aggaaatgacaagcaaggaccaagaaa 36737463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 22179963 - 22180059
Alignment:
Q  196 aagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaag 291  Q
    ||||||||||||||||| | | || |||  |||||||| |||||||||| ||||||||||| | || |||||| || ||||||||||||||||||||    
T  22179963 aagttatctaaggaaaatctaccatttgagtgtaattttaccatttatgctttacatgcctgattctactcaatttatgcaggaaatgacaagcaag 22180059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 27353563 - 27353676
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | |||| |||  || ||||| |||||||||| ||||||||||| | || || ||| || ||||||    
T  27353563 ttagtgacttgttttgcaagttatctaaggaaaagctatcatttgagtgcaattttaccatttatgctttacatgcctgattctacccaatttatgcagg 27353662  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  27353663 aaatgacaagcaag 27353676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 27347483 - 27347596
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  |||||||| |||||||||| ||||||||||| | || |  ||| || ||||||    
T  27347483 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtaattttaccatttatgctttacatgcctgattctatccaatttatgcagg 27347582  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  27347583 aaatgacaagcaag 27347596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 28926869 - 28926756
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  || ||||| |||||||||| ||||||||||| | || || ||| || ||||||    
T  28926869 ttagtgactttttttgcaagttatctaaggaaaagctaccatttgagtgcaattttaccatttatgctttacatgcctgattctacccaatttatgcagg 28926770  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  28926769 aaatgacaagcaag 28926756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 132 - 337
Target Start/End: Original strand, 16129000 - 16129204
Alignment:
Q  132 tgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatt 231  Q
    ||||||||||||||||||   ||  ||| | ||||||||||  ||||||| | |||| || || ||||||||||||||||| |||||| |||||||||||    
T  16129000 tgataagtgctcaaaagtaccatctttcatgtgttaaaataggcattttaatgacttgttttgcaagttatctaaggaaaagcaatcatttgttgtaatt 16129099  T
Q  232 tcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaaacaactttccaaaccaagcaaaactcgctta 331  Q
    | |||||||||| |||  |||||| || | |||||||||||||||| ||||||||||||| | ||||||||||  ||||||  |||||| ||||||||||    
T  16129100 tgaccatttatgctttcgatgccttacgctactcaacttgtgcagg-aatgacaagcaaggaccaagaaacaaggttccaagtcaagcagaactcgctta 16129198  T
Q  332 agcgag 337  Q
    ||||||    
T  16129199 agcgag 16129204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 176 - 363
Target Start/End: Original strand, 39453390 - 39453577
Alignment:
Q  176 attttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgca 275  Q
    |||||||| |||| || || ||||||||||||||||||| | || ||||||||||||  ||||||||| ||||  ||||| |||| |||||| ||||| |    
T  39453390 attttagtgacttgttttgcaagttatctaaggaaaaactaccatttgttgtaattttgccatttatgctttatgtgccttactctactcaatttgtgta 39453489  T
Q  276 ggaaatgacaagcaagaaacaagaaacaactttccaaaccaagcaaaactcgcttaagcgagggtaattcgcttaagcgagaaagttc 363  Q
    |||||||||||||||| | |||||||| | |||   | |||||| |||||||||||||||||   || || |||||||||||||||||    
T  39453490 ggaaatgacaagcaaggaccaagaaacgattttttgagccaagccaaactcgcttaagcgagttcaactcacttaagcgagaaagttc 39453577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 13829594 - 13829763
Alignment:
Q  132 tgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatt 231  Q
    ||||||||||||||| ||  |||| ||| | ||||||| ||  |||||||||||||| | ||  ||||||||| ||||||| | | ||||| ||||| ||    
T  13829594 tgataagtgctcaaaggtaatatatttcatgtgttaaattatgcattttagtaacttgtcctacaagttatctgaggaaaagctaccaattattgtactt 13829693  T
Q  232 tcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaaa 301  Q
    | || |||| || ||||||||||| | || |||||| ||||||||||||||||||||||| | |||||||    
T  13829694 ttactatttgtgctttacatgcctgattctactcaatttgtgcaggaaatgacaagcaaggaccaagaaa 13829763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 432951 - 432867
Alignment:
Q  130 cctgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaac 214  Q
    ||||||||||||||||||||| |||| ||||||||||||  ||  ||||||||| |||| ||||  |||||||||| ||||||||    
T  432951 cctgataagtgctcaaaagtgatatatttcttatgttaatttaggcattttagtgacttgttctacaagttatctatggaaaaac 432867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 16833475 - 16833362
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattg-ttgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || ||| ||||| ||| |||||||||| ||||||||||| | || |  ||| || ||||||    
T  16833475 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgattgtatttttaccatttatgctttacatgcctgattctatccaatttatgcagg 16833376  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  16833375 aaatgacaagcaag 16833362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 38122762 - 38122649
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  |||||| | |||||||||| ||||||||||| | || || ||| || ||||||    
T  38122762 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtaatattaccatttatgctttacatgcctgattctacccaatttatgcagg 38122663  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  38122662 aaatgacaagcaag 38122649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 12168884 - 12168788
Alignment:
Q  196 aagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaag 291  Q
    ||||||||||||||||| | | || |||  || ||||| |||||||||| ||||||||||| | || || ||| || ||||||||||||||||||||    
T  12168884 aagttatctaaggaaaagctaccatttgagtgcaattttaccatttatgctttacatgcctgattctacccaatttatgcaggaaatgacaagcaag 12168788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 26233370 - 26233239
Alignment:
Q  2 tatcgtggttttggttcatattggggagag-gcataataaaaaatttgttttctcagattaatggttaaaccctattatatgtcttcaaagcatgtaatt 100  Q
    ||||||||| |||||| ||||| ||||  | ||||| |||||| |||||||| | | |||  ||||| ||| | ||| ||||||||||||| ||||||||    
T  26233370 tatcgtggtcttggtttatatttgggaaggagcatattaaaaattttgtttttttatattggtggttgaactc-attgtatgtcttcaaagtatgtaatt 26233272  T
Q  101 gcttgacttat--tgtaatgggcttcgagtacc 131  Q
     ||||||||||  ||||||||| || |||||||    
T  26233271 tcttgacttattatgtaatgggtttggagtacc 26233239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 131 - 337
Target Start/End: Original strand, 45527009 - 45527214
Alignment:
Q  131 ctgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaat 230  Q
    |||||||||||||||||||  |||| ||||||||||||||||  ||||| ||| |||| || |  || ||||||||||||||  ||||||||||||| ||    
T  45527009 ctgataagtgctcaaaagtaatatatttcttatgttaaaatatgcatttcagtgacttgttatacaaattatctaaggaaaactaatcaattgttgtgat 45527108  T
Q  231 ttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaaacaactttccaaaccaagcaaaactcgctt 330  Q
    |  |||||||||| |||| |||| | |||| |||||||||||||| | ||||||||||||| | ||||||||||  |||||| ||||||| ||||| |||    
T  45527109 taaaccatttatgctttaaatgctttactctactcaacttgtgcaag-aatgacaagcaaggaccaagaaacaatgttccaagccaagcataactcactt 45527207  T
Q  331 aagcgag 337  Q
    | |||||    
T  45527208 acgcgag 45527214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 8614977 - 8615073
Alignment:
Q  196 aagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaag 291  Q
    ||||||||||||||||| | | || |||  || ||||| |||||||||| ||||||||||| | || || ||| || ||||||||||||||||||||    
T  8614977 aagttatctaaggaaaagctaccatttgagtgcaattttaccatttatgctttacatgcctgattctacccaatttatgcaggaaatgacaagcaag 8615073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 52045591 - 52045495
Alignment:
Q  196 aagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaag 291  Q
    ||||||||||||||||| | | || |||  |||||||| |||||||||| ||||||||||| | || |  ||| || ||||||||||||||||||||    
T  52045591 aagttatctaaggaaaagctaccatttgagtgtaattttaccatttatgctttacatgcctgattctagccaatttatgcaggaaatgacaagcaag 52045495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 301
Target Start/End: Complemental strand, 52308701 - 52308595
Alignment:
Q  196 aagttatctaaggaaaaacaatcaattg-ttgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaa 294  Q
    ||||||||||||||||| | | || |||  |||||||| |||||||||| |||||||| || | || || ||| || ||||||||| |||||||||| |     
T  52308701 aagttatctaaggaaaagctaccatttgagtgtaattttaccatttatgctttacatgtctgattctacccaatttatgcaggaaacgacaagcaaggac 52308602  T
Q  295 caagaaa 301  Q
    |||||||    
T  52308601 caagaaa 52308595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 27031512 - 27031399
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  |||||| | |||||||||| ||||||||||| | || || ||| || |||| |    
T  27031512 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtaatattaccatttatgctttacatgcctgattctacccaatttatgcaag 27031413  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  27031412 aaatgacaagcaag 27031399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 376
Target Start/End: Complemental strand, 31665347 - 31665104
Alignment:
Q  132 tgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatt 231  Q
    ||||||||||||||||||  |||| ||| | ||||||||||  ||||  ||| |||| || || ||||||||||||||||| |||||||||||||| ||     
T  31665347 tgataagtgctcaaaagtaatatatttcatgtgttaaaatatgcattacagtgacttgttatgcaagttatctaaggaaaagcaatcaattgttgtgatc 31665248  T
Q  232 tcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaaacaactttccaaaccaagcaaaactcgctta 331  Q
    | |||||||||| |||| |||  | |||| |||||||| ||||||| |||| |||||||| | ||||||||||  |||||| ||||||| ||||| ||||    
T  31665247 ttaccatttatgctttaaatgttttactctactcaactggtgcagg-aatggcaagcaaggaccaagaaacaatattccaagccaagcagaactcactta 31665149  T
Q  332 agcgagggtaattcgcttaagcgagaaagttctagggagcaactc 376  Q
     |||||   |  | ||||| |||||||||||| ||||||||||||    
T  31665148 cgcgagatcatcttgcttacgcgagaaagttccagggagcaactc 31665104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 291
Target Start/End: Complemental strand, 2798267 - 2798153
Alignment:
Q  178 tttagtaacttattctgtaagttatctaaggaaaaacaatcaattg-ttgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcag 276  Q
    |||||| |||| ||||| |||||||||||||||||||||||| |||  |||| ||  |||||||||| ||||||| ||| | || |  ||| || |||||    
T  2798267 tttagtgacttgttctgcaagttatctaaggaaaaacaatcatttgagtgtatttataccatttatgctttacatacctgattctatccaatttatgcag 2798168  T
Q  277 gaaatgacaagcaag 291  Q
    |||||||||||||||    
T  2798167 gaaatgacaagcaag 2798153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19596602 - 19596734
Alignment:
Q  1 ctatcgtggttttggttcatat-tggggagaggcataataaaaaatttgttttctcagattaatggttaaaccctattatatgtcttcaaagcatgtaat 99  Q
    |||||||| | ||||||||| | ||||||| ||| ||||||||  ||||||||||  ||||  | ||| ||||| |||  |||| |||||||||||||||    
T  19596602 ctatcgtgatcttggttcatttgtggggaggggcgtaataaaacttttgttttcttggattggttgttgaaccccattgcatgtattcaaagcatgtaat 19596701  T
Q  100 tgcttgactt-attgtaatgggcttcgagtacc 131  Q
    | | ||||||  |||||||||||||||||||||    
T  19596702 ttcctgacttctttgtaatgggcttcgagtacc 19596734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 301
Target Start/End: Original strand, 22817892 - 22817998
Alignment:
Q  196 aagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaa 294  Q
    ||||||||||||||||| | | || |||  |||| ||| |||||||||| ||||||||||| | || || ||| || |||||||||||||||||||| |     
T  22817892 aagttatctaaggaaaagctaccatttgagtgtatttttaccatttatgctttacatgcctgattctacccaatttatgcaggaaatgacaagcaaggac 22817991  T
Q  295 caagaaa 301  Q
    |||||||    
T  22817992 caagaaa 22817998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 7143094 - 7143207
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  |||||| | |||||||||| ||||||||||| | || || ||| || ||||||    
T  7143094 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtaatattaccatttatgctttacatgcctgattctacccaatttatgcagg 7143193  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  7143194 aaatgacaagcaag 7143207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 10347031 - 10346918
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  || ||||| |||||||||| ||||||||||| | || || ||| || ||||||    
T  10347031 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgcaattttaccatttatgctttacatgcctgattctacccaatttatgcagg 10346932  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  10346931 aaatgacaagcaag 10346918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 22322592 - 22322496
Alignment:
Q  196 aagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaag 291  Q
    ||||||||||||||||| | | || |||  |||||||| |||||||||| ||||||| ||| | || || ||| || ||||||||||||||||||||    
T  22322592 aagttatctaaggaaaagctaccatttgagtgtaattttaccatttatgctttacatacctaattctacccaatttatgcaggaaatgacaagcaag 22322496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 301
Target Start/End: Complemental strand, 19472985 - 19472862
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| ||||||| || ||||||||||||||||| | | |  |||  |||| ||| |||||||||| ||||||||||| | || || ||| || ||||||    
T  19472985 ttagtgacttattttgcaagttatctaaggaaaagctaccttttgagtgtatttttaccatttatgctttacatgcctaattctacccaatttatgcagg 19472886  T
Q  278 aaatgacaagcaagaaacaagaaa 301  Q
    ||| |||||||||| | |||||||    
T  19472885 aaacgacaagcaaggaccaagaaa 19472862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 291
Target Start/End: Original strand, 2477164 - 2477230
Alignment:
Q  225 tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaag 291  Q
    |||| ||| |||||||||||||||||||||| | || ||  || || ||||||||||||||||||||    
T  2477164 tgtatttttaccatttatgttttacatgcctgattctacctaatttatgcaggaaatgacaagcaag 2477230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 31878057 - 31878171
Alignment:
Q  178 tttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcag 276  Q
    |||||| |||||| ||| |||||||||| |||||| | |||| |||  |||| ||  |||||||||| ||||||||||| | || || ||| || || ||    
T  31878057 tttagtgacttatcctgcaagttatctagggaaaagctatcatttgagtgtatttataccatttatgctttacatgcctgattctacccaatttatgtag 31878156  T
Q  277 gaaatgacaagcaag 291  Q
    |||||||||||||||    
T  31878157 gaaatgacaagcaag 31878171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 45501300 - 45501243
Alignment:
Q  234 accatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaag 291  Q
    |||||||||||||||||||||| | || || ||| || ||||| ||||||||||||||    
T  45501300 accatttatgttttacatgcctgattctacccaatttatgcagtaaatgacaagcaag 45501243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19754732 - 19754600
Alignment:
Q  1 ctatcgtggttttggttcatat-tggggagaggcataataaaaaatttgttttctcagattaatggttaaaccctattatatgtcttcaaagcatgtaat 99  Q
    |||||||| | ||||||||| | ||||||| ||| ||||||||  ||||||||||  ||||  ||||| ||||  |||  |||| |||||||||| ||||    
T  19754732 ctatcgtgatcttggttcatttgtggggaggggcgtaataaaacttttgttttcttggattggtggttgaaccaaattgcatgtattcaaagcatataat 19754633  T
Q  100 tgcttgacttatt-gtaatgggcttcgagtacc 131  Q
    | | |||||| || ||||||||||| |||||||    
T  19754632 ttcctgacttctttgtaatgggctttgagtacc 19754600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 337
Target Start/End: Original strand, 30422222 - 30422384
Alignment:
Q  175 cattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgc 274  Q
    ||||||||| |||| || || ||||||||||||||||||| | || || | |||||||  ||||||||| |||||||| || |||| |||||| ||||||    
T  30422222 cattttagtgacttgttttgcaagttatctaaggaaaaactaccatttatcgtaattttgccatttatgctttacatgtcttactctactcaatttgtgc 30422321  T
Q  275 aggaaatgacaagcaagaaacaagaaacaactttccaaaccaagcaaaactcgcttaagcgag 337  Q
    ||||||||||||||||| | |||||||| |||||   | |||||| |||||||||||||||||    
T  30422322 aggaaatgacaagcaaggaccaagaaaccactttatgagccaagccaaactcgcttaagcgag 30422384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 36233908 - 36233777
Alignment:
Q  1 ctatcgtggttttggttcatat-tggggagaggcataataaaaaatttgttttctcagattaatggttaaaccctattatatgtcttcaaagcatgtaat 99  Q
    |||||||| | || |||||||| | ||||| ||||||||||||||||||||||||| ||||| ||||| ||||| ||| ||| |||||||| ||||||||    
T  36233908 ctatcgtgatcttagttcatatgtagggaggggcataataaaaaatttgttttctcggattagtggttgaaccccattgtatatcttcaaaacatgtaat 36233809  T
Q  100 tgcttgacttattgtaatgggcttcgagtacc 131  Q
    | |||||||||||||||||| ||| |||||||    
T  36233808 ttcttgacttattgtaatggacttggagtacc 36233777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 34870398 - 34870321
Alignment:
Q  175 cattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatttcaccatttatgttttacatg 252  Q
    |||||||||  ||| || || ||||||||||||||||||| ||||||||||| | ||| |||||||||| ||||||||    
T  34870398 cattttagtggcttgttttgcaagttatctaaggaaaaactatcaattgttgcatttttaccatttatgctttacatg 34870321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 14343928 - 14344041
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  || ||||| |||||||||| ||||||||||| | || || ||| || ||||||    
T  14343928 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgcaattttaccatttatgctttacatgcctgattctacccaatttatgcagg 14344027  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  14344028 aaatgacaagcaag 14344041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 30607906 - 30607793
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  |||||| | |||||||||| ||||||||||| | || || ||| || ||||||    
T  30607906 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtaatattaccatttatgctttacatgcctgattctacccaatttatgcagg 30607807  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  30607806 aaatgacaagcaag 30607793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 11724001 - 11723889
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  || ||||| |||||||||| ||||||||||| | || || ||| || ||||||    
T  11724001 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgcaattttaccatttatgctttacatgcctgattctacccaatttatgcagg 11723902  T
Q  278 aaatgacaagcaa 290  Q
    |||||||||||||    
T  11723901 aaatgacaagcaa 11723889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 9403756 - 9403869
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  |||||| | || ||||||| ||||||||||| | || || ||| || ||||||    
T  9403756 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtaatattactatttatgctttacatgcctgattctacccaatttatgcagg 9403855  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  9403856 aaatgacaagcaag 9403869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 291
Target Start/End: Original strand, 34455630 - 34455743
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  |||||| | |||||||||| ||||||||||  | || || ||| || ||||||    
T  34455630 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtaatattaccatttatgctttacatgcccgattctacccaatttatgcagg 34455729  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  34455730 aaatgacaagcaag 34455743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 290
Target Start/End: Original strand, 24835195 - 24835307
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  |||| ||| |||||||||| ||||||||||| | || || ||| || ||||||    
T  24835195 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtatttttaccatttatgctttacatgcctgattctacccaatttatgcagg 24835294  T
Q  278 aaatgacaagcaa 290  Q
    ||| |||||||||    
T  24835295 aaacgacaagcaa 24835307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 33434090 - 33434166
Alignment:
Q  225 tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaaa 301  Q
    |||| ||| |||||||||| ||||||||||| | || || ||| || ||||||||| |||||||||| | |||||||    
T  33434090 tgtatttttaccatttatgctttacatgcctgattctacccaatttatgcaggaaacgacaagcaaggaccaagaaa 33434166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 132 - 301
Target Start/End: Original strand, 15641714 - 15641883
Alignment:
Q  132 tgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatt 231  Q
    ||||||||||||||||||  | |||||||||||||||| ||   |||||||| |||| ||||| ||||||||||||||||| | | ||||||||||| ||    
T  15641714 tgataagtgctcaaaagtaatttaattcttatgttaaattaggtattttagtgacttgttctgcaagttatctaaggaaaagctaccaattgttgtactt 15641813  T
Q  232 tcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaaa 301  Q
    | |||||||||| ||||||||||| | ||||  |   || ||| |||||||||||||||| |||||||||    
T  15641814 ttaccatttatgctttacatgcctgattccaacccttttatgctggaaatgacaagcaaggaacaagaaa 15641883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 139 - 301
Target Start/End: Original strand, 26603622 - 26603784
Alignment:
Q  139 tgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatttcaccat 238  Q
    |||||||||||| |||| ||| | ||||||  ||  ||||||||| |||| || || |||||||||||||||||   | ||||||||||| ||| |||||    
T  26603622 tgctcaaaagtgatatatttcatgtgttaatttaggcattttagtgacttgttttgcaagttatctaaggaaaatgtaccaattgttgtacttttaccat 26603721  T
Q  239 ttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaagaaacaagaaa 301  Q
    ||||| ||||||||||| | || |||||| ||||||||||||||||||||||| | |||||||    
T  26603722 ttatgctttacatgcctgattctactcaatttgtgcaggaaatgacaagcaagcaccaagaaa 26603784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 5671808 - 5671728
Alignment:
Q  132 tgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaa 212  Q
    ||||||||||||||||||| |||| ||||||||||||  ||  ||||||||| |||| ||||  |||||||||| ||||||    
T  5671808 tgataagtgctcaaaagtgatatatttcttatgttaatttaggcattttagtgacttgttctacaagttatctatggaaaa 5671728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 26511226 - 26511113
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  | |||||| |||||||||| ||||||||||| | || || ||| || ||||||    
T  26511226 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtataattttaccatttatgctttacatgcctgattctacccaatttatgcagg 26511127  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  26511126 aaatgacaagcaag 26511113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 291
Target Start/End: Complemental strand, 26516342 - 26516229
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  | |||||| |||||||||| ||||||||||| | || || ||| || ||||||    
T  26516342 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtataattttaccatttatgctttacatgcctgattctacccaatttatgcagg 26516243  T
Q  278 aaatgacaagcaag 291  Q
    ||||||||||||||    
T  26516242 aaatgacaagcaag 26516229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 248
Target Start/End: Original strand, 31131319 - 31131392
Alignment:
Q  175 cattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatttcaccatttatgtttta 248  Q
    ||||||||| |||| || || ||||||||||||||||| | ||||||||||||| ||  |||||||||| ||||    
T  31131319 cattttagtgacttgttttgcaagttatctaaggaaaatctatcaattgttgtatttataccatttatgcttta 31131392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 24878406 - 24878486
Alignment:
Q  132 tgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaa 212  Q
    ||||||||||||||||||| |||| |||||||||||   ||  ||||||||| |||| ||||  |||||||||| ||||||    
T  24878406 tgataagtgctcaaaagtgatatatttcttatgttagtttaggcattttagtgacttgttctacaagttatctatggaaaa 24878486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 301
Target Start/End: Complemental strand, 9934710 - 9934587
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattg-ttgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||||| | || |||  |||| ||| |||||||||| ||||||||||| | || |  ||| || ||||||    
T  9934710 ttagtgacttgttttgcaagttatctaaggaaaaactaccatttgagtgtatttttaccatttatgctttacatgcctgattctatccaatttatgcagg 9934611  T
Q  278 aaatgacaagcaagaaacaagaaa 301  Q
    ||| |||||||||| | |||||||    
T  9934610 aaacgacaagcaaggaccaagaaa 9934587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 176 - 363
Target Start/End: Complemental strand, 10284 - 10097
Alignment:
Q  176 attttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgca 275  Q
    |||||||| |||| || || ||||||||||||||||||| | || ||||||||||||  ||||||||| ||||  ||||| | || |||||| ||||| |    
T  10284 attttagtgacttgttttgcaagttatctaaggaaaaactaccatttgttgtaattttgccatttatgctttatgtgccttattctactcaatttgtgta 10185  T
Q  276 ggaaatgacaagcaagaaacaagaaacaactttccaaaccaagcaaaactcgcttaagcgagggtaattcgcttaagcgagaaagttc 363  Q
    |||||||||||||||| | |||||||| | |||   | |||||| |||||||||||||||||   || || |||||||||||||||||    
T  10184 ggaaatgacaagcaaggaccaagaaacgattttttgagccaagccaaactcgcttaagcgagttcaactcacttaagcgagaaagttc 10097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 291
Target Start/End: Complemental strand, 354512 - 354352
Alignment:
Q  132 tgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaat 230  Q
    ||||||||||||||||||   ||| ||| | ||||||  || |||  ||||| |||| || || ||||||||||||||||| | | || |||  ||||||    
T  354512 tgataagtgctcaaaagtaacatatttcatgtgttaacttagacaaattagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtaat 354413  T
Q  231 ttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaag 291  Q
     | |||||||||| ||||||||||| | || || ||| || ||||||||||||||||||||    
T  354412 attaccatttatgctttacatgcctgattctacccaatttatgcaggaaatgacaagcaag 354352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000009; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 27256909 - 27256989
Alignment:
Q  132 tgataagtgctcaaaagtgttataattcttatgttaaaataaacattttagtaacttattctgtaagttatctaaggaaaa 212  Q
    ||||||||||||||||||| |||| ||||||||||||  ||  ||||||||| |||| ||||  |||||||||| ||||||    
T  27256909 tgataagtgctcaaaagtgatatatttcttatgttaatttaggcattttagtgacttgttctacaagttatctatggaaaa 27256989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 175 - 255
Target Start/End: Complemental strand, 36668568 - 36668488
Alignment:
Q  175 cattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatttcaccatttatgttttacatgcct 255  Q
    |||||||||  ||| || || ||||||||||||||||| | ||||||||||| | ||| |||||||||| |||||||||||    
T  36668568 cattttagtggcttgttttgcaagttatctaaggaaaagctatcaattgttgcatttttaccatttatgctttacatgcct 36668488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 29223150 - 29223279
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  |||| ||| |||||||||| ||||||||||| | || || ||| || ||||||    
T  29223150 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtatttttaccatttatgctttacatgcctgattctacccaatttatgcagg 29223249  T
Q  278 aaatgacaagcaagaaacaagaaacaactt 307  Q
    ||| |||||||||| | ||||||| |||||    
T  29223250 aaacgacaagcaaggaccaagaaagaactt 29223279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 29336449 - 29336578
Alignment:
Q  179 ttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcagg 277  Q
    ||||| |||| || || ||||||||||||||||| | | || |||  |||| ||| |||||||||| ||||||||||| | || || ||| || ||||||    
T  29336449 ttagtgacttgttttgcaagttatctaaggaaaagctaccatttgagtgtatttttaccatttatgctttacatgcctgattctacccaatttatgcagg 29336548  T
Q  278 aaatgacaagcaagaaacaagaaacaactt 307  Q
    ||| |||||||||| | ||||||| |||||    
T  29336549 aaacgacaagcaaggaccaagaaagaactt 29336578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 35283415 - 35283338
Alignment:
Q  35 taataaaaaatttgttttctcagattaatggttaaaccctattatatgtcttcaaagcatgtaattgcttgacttatt 112  Q
    |||||||||||||||||||||| | |  |||||  |||| |||  |||||||| |||||||||||| |||||||||||    
T  35283415 taataaaaaatttgttttctcataatggtggttggacccaattggatgtcttcgaagcatgtaatttcttgacttatt 35283338  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 291
Target Start/End: Original strand, 32522421 - 32522535
Alignment:
Q  178 tttagtaacttattctgtaagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcag 276  Q
    |||||| |||| || || ||||||||||||||||| | |||| |||  |||| ||  |||||||||| ||||||||||| | || || ||| ||  ||||    
T  32522421 tttagtgacttgttttgcaagttatctaaggaaaagctatcatttgagtgtatttataccatttatgctttacatgcctgattctacccaatttacgcag 32522520  T
Q  277 gaaatgacaagcaag 291  Q
    |||||||||||||||    
T  32522521 gaaatgacaagcaag 32522535  T

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Target: scaffold0352 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 8622 - 8752
Alignment:
Q  1 ctatcgtggttttggttcatat-tggggagaggcataataaaaaatttgttttctcagattaatggttaaaccctattatatgtcttcaaagcatgtaat 99  Q
    |||||||| ||||||||||||| ||||||| ||| |||||||   ||| ||||||  ||||  || || ||||| ||| |||||||||||| ||||| ||    
T  8622 ctatcgtgattttggttcatatatggggaggggcgtaataaatttttt-ttttcttggattggtgcttgaaccccattgtatgtcttcaaaacatgttat 8720  T
Q  100 tgcttgacttattgtaatgggcttcgagtacc 131  Q
    |  |||||||||| |||||||||| |||||||    
T  8721 tttttgacttattataatgggctttgagtacc 8752  T

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Target: scaffold1494 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1494
Description:

Target: scaffold1494; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 291
Target Start/End: Original strand, 1018 - 1114
Alignment:
Q  196 aagttatctaaggaaaaacaatcaattgt-tgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgcaggaaatgacaagcaag 291  Q
    ||||||||||||||||| | | || |||  || ||||| |||||||||| ||||||||||| | || || ||| || ||||||||||||||||||||    
T  1018 aagttatctaaggaaaagctaccatttgagtgcaattttaccatttatgctttacatgcctgattctacccaatttatgcaggaaatgacaagcaag 1114  T

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Target: scaffold0744 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 301
Target Start/End: Original strand, 1890 - 2016
Alignment:
Q  175 cattttagtaacttattctgtaagttatctaaggaaaaacaatcaattgttgtaatttcaccatttatgttttacatgcctcactccactcaacttgtgc 274  Q
    ||||||||| |||| ||||| ||||||||||||||||| | | ||| |  |||  ||| |||||||||| ||||||||||| | | |   |   || |||    
T  1890 cattttagttacttgttctgcaagttatctaaggaaaagctaccaaattgtgttcttttaccatttatgctttacatgcctgatttcctcccttttatgc 1989  T
Q  275 aggaaatgacaagcaagaaacaagaaa 301  Q
    ||||||||||||||||| |||||||||    
T  1990 aggaaatgacaagcaaggaacaagaaa 2016  T

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