View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7793_low_1 (Length: 994)

Name: NF7793_low_1
Description: NF7793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7793_low_1
NF7793_low_1
[»] chr3 (47 HSPs)
chr3 (166-781)||(29856061-29856679)
chr3 (155-704)||(31115115-31115654)
chr3 (709-781)||(31114998-31115070)
chr3 (155-208)||(45081405-45081458)
chr3 (160-208)||(31974654-31974702)
chr3 (153-208)||(14871149-14871204)
chr3 (155-206)||(48648201-48648252)
chr3 (154-208)||(46150731-46150785)
chr3 (156-208)||(265100-265152)
chr3 (156-303)||(31114943-31115087)
chr3 (155-211)||(37988217-37988273)
chr3 (154-214)||(41458030-41458090)
chr3 (159-206)||(21727533-21727580)
chr3 (160-211)||(51469278-51469329)
chr3 (160-206)||(17603171-17603217)
chr3 (178-305)||(29856588-29856715)
chr3 (156-206)||(51827498-51827548)
chr3 (154-208)||(52281763-52281817)
chr3 (154-204)||(55373712-55373762)
chr3 (160-205)||(54458670-54458715)
chr3 (155-214)||(10847289-10847348)
chr3 (154-205)||(20213536-20213587)
chr3 (157-208)||(37520563-37520614)
chr3 (150-205)||(48413312-48413367)
chr3 (154-213)||(48507029-48507088)
chr3 (163-213)||(981673-981723)
chr3 (155-205)||(13477055-13477105)
chr3 (155-205)||(20212978-20213028)
chr3 (155-213)||(41474648-41474706)
chr3 (155-213)||(48764475-48764533)
chr3 (156-206)||(48765074-48765124)
chr3 (155-213)||(52266450-52266508)
chr3 (162-260)||(48506443-48506539)
chr3 (157-206)||(48649177-48649226)
chr3 (156-204)||(44699826-44699874)
chr3 (166-213)||(17605715-17605762)
chr3 (154-205)||(33277509-33277560)
chr3 (178-213)||(44699882-44699917)
chr3 (168-214)||(13477774-13477820)
chr3 (160-206)||(17603965-17604011)
chr3 (155-205)||(27082774-27082824)
chr3 (155-205)||(33276890-33276940)
chr3 (162-204)||(37987238-37987280)
chr3 (162-204)||(40872814-40872856)
chr3 (161-206)||(46149633-46149678)
chr3 (163-204)||(52282418-52282459)
chr3 (155-204)||(52605489-52605538)
[»] chr7 (52 HSPs)
chr7 (186-471)||(39803273-39803574)
chr7 (819-993)||(22606419-22606593)
chr7 (1-133)||(22606658-22606789)
chr7 (154-213)||(26636099-26636158)
chr7 (155-208)||(25599019-25599072)
chr7 (155-208)||(46428184-46428237)
chr7 (156-208)||(7668480-7668532)
chr7 (154-214)||(37949601-37949661)
chr7 (159-214)||(19067638-19067693)
chr7 (159-214)||(30661451-30661506)
chr7 (154-208)||(25342493-25342547)
chr7 (154-208)||(30660589-30660643)
chr7 (155-208)||(25343300-25343353)
chr7 (156-213)||(26636857-26636914)
chr7 (155-208)||(37950469-37950522)
chr7 (155-204)||(45099899-45099948)
chr7 (160-208)||(14686133-14686181)
chr7 (159-206)||(13785597-13785644)
chr7 (155-213)||(3772523-3772581)
chr7 (158-216)||(21496977-21497035)
chr7 (154-208)||(25343241-25343295)
chr7 (154-208)||(46428819-46428873)
chr7 (155-208)||(27948443-27948496)
chr7 (155-204)||(36378809-36378858)
chr7 (156-204)||(3903345-3903393)
chr7 (156-208)||(18977771-18977823)
chr7 (160-208)||(24389618-24389666)
chr7 (154-214)||(40273556-40273616)
chr7 (162-206)||(43065120-43065164)
chr7 (154-205)||(3689276-3689327)
chr7 (159-214)||(19068391-19068446)
chr7 (160-206)||(1417610-1417656)
chr7 (155-213)||(25599816-25599874)
chr7 (160-206)||(38225979-38226025)
chr7 (160-206)||(47719708-47719754)
chr7 (160-205)||(3029203-3029248)
chr7 (155-208)||(16664127-16664180)
chr7 (155-208)||(17638487-17638540)
chr7 (155-204)||(23889812-23889861)
chr7 (160-205)||(31278159-31278204)
chr7 (155-204)||(37395505-37395554)
chr7 (155-208)||(45161966-45162019)
chr7 (158-208)||(24581046-24581093)
chr7 (160-204)||(24719337-24719381)
chr7 (159-206)||(3688385-3688432)
chr7 (160-206)||(14305092-14305138)
chr7 (154-204)||(37706424-37706474)
chr7 (154-208)||(45931219-45931273)
chr7 (179-208)||(23889867-23889896)
chr7 (179-208)||(23902062-23902091)
chr7 (161-206)||(24453730-24453775)
chr7 (156-205)||(45099136-45099185)
[»] chr1 (48 HSPs)
chr1 (155-214)||(30663972-30664031)
chr1 (153-214)||(30663353-30663414)
chr1 (160-208)||(4439208-4439256)
chr1 (154-206)||(25469090-25469142)
chr1 (154-213)||(13263513-13263572)
chr1 (159-214)||(34309226-34309281)
chr1 (155-208)||(11704810-11704863)
chr1 (160-213)||(28181535-28181588)
chr1 (155-208)||(49680808-49680861)
chr1 (160-208)||(4433849-4433897)
chr1 (160-208)||(7558451-7558499)
chr1 (153-205)||(25671165-25671217)
chr1 (153-208)||(10121554-10121609)
chr1 (153-208)||(13262828-13262883)
chr1 (154-205)||(19171774-19171825)
chr1 (156-207)||(36389773-36389824)
chr1 (550-608)||(8473499-8473556)
chr1 (155-205)||(19172580-19172630)
chr1 (155-213)||(25468507-25468565)
chr1 (154-208)||(30932797-30932851)
chr1 (156-214)||(37852521-37852579)
chr1 (155-208)||(7406242-7406295)
chr1 (159-208)||(7559201-7559250)
chr1 (155-208)||(8987787-8987840)
chr1 (160-216)||(168892-168948)
chr1 (155-207)||(9778975-9779027)
chr1 (154-206)||(25672028-25672080)
chr1 (154-214)||(34308469-34308529)
chr1 (146-205)||(10120771-10120830)
chr1 (159-214)||(27256708-27256763)
chr1 (158-208)||(11548800-11548850)
chr1 (160-206)||(47967864-47967910)
chr1 (160-205)||(17172667-17172712)
chr1 (160-205)||(24991972-24992017)
chr1 (155-204)||(37853141-37853190)
chr1 (159-204)||(46391872-46391917)
chr1 (153-206)||(50271787-50271840)
chr1 (160-204)||(17171933-17171977)
chr1 (153-213)||(32038472-32038532)
chr1 (162-213)||(8988545-8988596)
chr1 (155-214)||(12760773-12760832)
chr1 (155-206)||(28182076-28182127)
chr1 (178-213)||(46812184-46812219)
chr1 (155-205)||(36390372-36390422)
chr1 (162-204)||(45818025-45818067)
chr1 (155-204)||(13142673-13142722)
chr1 (156-201)||(26118671-26118716)
chr1 (156-205)||(46909367-46909416)
[»] scaffold0085 (3 HSPs)
scaffold0085 (155-213)||(15020-15078)
scaffold0085 (156-213)||(15080-15137)
scaffold0085 (154-204)||(22076-22126)
[»] chr8 (33 HSPs)
chr8 (155-211)||(41974638-41974694)
chr8 (154-204)||(8373698-8373748)
chr8 (154-203)||(37732823-37732872)
chr8 (154-205)||(9197824-9197875)
chr8 (159-204)||(8372915-8372960)
chr8 (155-208)||(38576303-38576356)
chr8 (155-211)||(3165120-3165176)
chr8 (153-213)||(11686960-11687020)
chr8 (154-206)||(22320371-22320423)
chr8 (154-206)||(31641508-31641560)
chr8 (160-208)||(37025009-37025056)
chr8 (153-204)||(15198295-15198346)
chr8 (155-206)||(26654381-26654432)
chr8 (154-213)||(31602013-31602072)
chr8 (155-205)||(9197093-9197143)
chr8 (159-205)||(17724767-17724813)
chr8 (155-205)||(26652291-26652341)
chr8 (155-213)||(31642083-31642141)
chr8 (160-206)||(32414527-32414573)
chr8 (155-208)||(8996975-8997028)
chr8 (154-214)||(39778915-39778975)
chr8 (155-206)||(3417355-3417406)
chr8 (155-206)||(11686224-11686275)
chr8 (154-205)||(17725658-17725709)
chr8 (154-205)||(32979828-32979879)
chr8 (155-214)||(39779836-39779895)
chr8 (155-205)||(3043240-3043290)
chr8 (155-205)||(14825641-14825691)
chr8 (160-206)||(27441469-27441515)
chr8 (155-205)||(27442145-27442195)
chr8 (159-206)||(39860112-39860161)
chr8 (155-204)||(3043970-3044019)
chr8 (156-205)||(37064815-37064864)
[»] chr6 (24 HSPs)
chr6 (154-213)||(26529509-26529568)
chr6 (155-213)||(10171273-10171331)
chr6 (155-205)||(18227729-18227778)
chr6 (153-214)||(8488464-8488525)
chr6 (154-213)||(10171962-10172021)
chr6 (153-208)||(11434458-11434513)
chr6 (155-206)||(33435337-33435388)
chr6 (156-206)||(19311830-19311880)
chr6 (155-213)||(26528820-26528878)
chr6 (156-206)||(33436277-33436327)
chr6 (155-208)||(19310998-19311051)
chr6 (159-208)||(19323768-19323817)
chr6 (153-216)||(3623170-3623233)
chr6 (155-214)||(8489275-8489334)
chr6 (165-208)||(19322990-19323033)
chr6 (154-208)||(9441233-9441287)
chr6 (159-204)||(2512439-2512484)
chr6 (155-216)||(19653967-19654028)
chr6 (155-216)||(21133220-21133281)
chr6 (154-204)||(1366964-1367014)
chr6 (155-213)||(12344891-12344949)
chr6 (155-204)||(505534-505583)
chr6 (155-216)||(3623740-3623801)
chr6 (155-208)||(25060813-25060866)
[»] chr5 (40 HSPs)
chr5 (154-208)||(4084876-4084930)
chr5 (154-208)||(29046025-29046079)
chr5 (155-216)||(19128767-19128828)
chr5 (154-204)||(234697-234747)
chr5 (154-208)||(6476792-6476846)
chr5 (155-213)||(28705875-28705933)
chr5 (154-208)||(29087921-29087975)
chr5 (155-204)||(237826-237875)
chr5 (155-204)||(19359701-19359750)
chr5 (155-213)||(235589-235647)
chr5 (160-206)||(7632097-7632143)
chr5 (155-216)||(17071221-17071282)
chr5 (155-204)||(19360481-19360530)
chr5 (159-208)||(27364488-27364537)
chr5 (155-208)||(28705162-28705215)
chr5 (153-205)||(13306273-13306325)
chr5 (156-204)||(14478919-14478967)
chr5 (160-216)||(34600263-34600319)
chr5 (161-208)||(10554550-10554597)
chr5 (155-213)||(236925-236983)
chr5 (160-206)||(1281838-1281884)
chr5 (160-206)||(1554086-1554132)
chr5 (159-201)||(10554523-10554565)
chr5 (154-216)||(17071787-17071849)
chr5 (155-205)||(25858207-25858257)
chr5 (158-208)||(34709038-34709088)
chr5 (161-206)||(1283503-1283548)
chr5 (160-201)||(1283533-1283574)
chr5 (169-206)||(9407261-9407298)
chr5 (153-206)||(33005516-33005569)
chr5 (160-216)||(22212972-22213028)
chr5 (161-208)||(36038698-36038745)
chr5 (156-206)||(22799763-22799813)
chr5 (160-214)||(33471084-33471138)
chr5 (154-216)||(34600824-34600886)
chr5 (154-204)||(43510228-43510278)
chr5 (155-204)||(235483-235532)
chr5 (155-204)||(237040-237089)
chr5 (160-205)||(33006299-33006344)
chr5 (160-205)||(38057599-38057644)
[»] chr4 (51 HSPs)
chr4 (154-216)||(47688473-47688535)
chr4 (160-208)||(599303-599351)
chr4 (154-206)||(8247693-8247745)
chr4 (160-208)||(11939443-11939491)
chr4 (155-214)||(20774176-20774235)
chr4 (154-213)||(30573706-30573765)
chr4 (154-208)||(47785801-47785855)
chr4 (155-206)||(8248524-8248575)
chr4 (155-206)||(8266189-8266240)
chr4 (153-208)||(24374785-24374840)
chr4 (154-204)||(2444369-2444419)
chr4 (155-213)||(7841542-7841600)
chr4 (155-205)||(31329722-31329772)
chr4 (159-213)||(53732437-53732491)
chr4 (154-204)||(53772804-53772854)
chr4 (161-206)||(8265365-8265410)
chr4 (155-208)||(26147034-26147087)
chr4 (160-205)||(26159626-26159671)
chr4 (161-213)||(16903640-16903692)
chr4 (155-211)||(40495093-40495149)
chr4 (155-211)||(53773585-53773641)
chr4 (155-206)||(24158824-24158875)
chr4 (154-205)||(42882686-42882737)
chr4 (162-205)||(52871303-52871346)
chr4 (163-206)||(55976172-55976215)
chr4 (154-213)||(56262475-56262534)
chr4 (178-216)||(5046005-5046043)
chr4 (154-208)||(9365166-9365220)
chr4 (155-201)||(16903677-16903723)
chr4 (158-216)||(53147872-53147930)
chr4 (155-213)||(53148608-53148666)
chr4 (162-216)||(55001434-55001488)
chr4 (155-208)||(2446163-2446216)
chr4 (160-205)||(3654520-3654565)
chr4 (159-204)||(19080387-19080432)
chr4 (155-216)||(47687907-47687968)
chr4 (160-204)||(19550289-19550333)
chr4 (154-205)||(1465317-1465368)
chr4 (154-208)||(7841790-7841842)
chr4 (155-214)||(44792632-44792691)
chr4 (160-206)||(142528-142574)
chr4 (160-206)||(5046486-5046532)
chr4 (158-208)||(7842531-7842581)
chr4 (160-206)||(24551927-24551973)
chr4 (166-208)||(43146650-43146692)
chr4 (178-216)||(43146692-43146730)
chr4 (160-206)||(55000690-55000736)
chr4 (160-206)||(55976959-55977005)
chr4 (164-205)||(9365821-9365862)
chr4 (156-205)||(44469491-44469540)
chr4 (153-214)||(44791720-44791781)
[»] chr2 (43 HSPs)
chr2 (154-213)||(22560564-22560623)
chr2 (154-208)||(1296376-1296430)
chr2 (155-208)||(1297124-1297177)
chr2 (155-208)||(9275584-9275637)
chr2 (155-208)||(9276331-9276384)
chr2 (159-208)||(29719448-29719497)
chr2 (155-204)||(33512095-33512144)
chr2 (154-214)||(11750254-11750314)
chr2 (155-205)||(6584231-6584281)
chr2 (155-205)||(23857028-23857078)
chr2 (154-208)||(24933833-24933887)
chr2 (154-204)||(36237628-36237678)
chr2 (155-216)||(18174663-18174724)
chr2 (155-208)||(19918723-19918776)
chr2 (155-208)||(29512369-29512422)
chr2 (160-208)||(15774205-15774253)
chr2 (160-204)||(26589022-26589066)
chr2 (152-208)||(42459046-42459102)
chr2 (159-206)||(9540333-9540380)
chr2 (153-216)||(18174095-18174158)
chr2 (154-213)||(42182611-42182670)
chr2 (156-214)||(8542543-8542601)
chr2 (155-205)||(12725619-12725669)
chr2 (160-206)||(15902885-15902931)
chr2 (160-206)||(22301873-22301919)
chr2 (162-208)||(23856640-23856686)
chr2 (160-206)||(29513150-29513196)
chr2 (155-208)||(29559421-29559474)
chr2 (156-208)||(23343778-23343830)
chr2 (156-208)||(24754995-24755047)
chr2 (160-204)||(27177915-27177959)
chr2 (157-205)||(34812860-34812908)
chr2 (155-214)||(11751064-11751123)
chr2 (154-205)||(18821235-18821286)
chr2 (168-206)||(16692977-16693015)
chr2 (155-205)||(18820430-18820480)
chr2 (155-205)||(22301192-22301242)
chr2 (167-208)||(11007241-11007282)
chr2 (155-208)||(24121291-24121344)
chr2 (155-216)||(26587146-26587207)
chr2 (161-206)||(26752726-26752771)
chr2 (160-205)||(27178649-27178694)
chr2 (159-208)||(38361069-38361118)
[»] scaffold0176 (1 HSPs)
scaffold0176 (155-205)||(26589-26639)
[»] scaffold0002 (1 HSPs)
scaffold0002 (154-208)||(428903-428957)
[»] scaffold2007 (1 HSPs)
scaffold2007 (155-208)||(748-801)
[»] scaffold0504 (1 HSPs)
scaffold0504 (155-204)||(5385-5434)
[»] scaffold0096 (1 HSPs)
scaffold0096 (155-204)||(39893-39942)
[»] scaffold0418 (1 HSPs)
scaffold0418 (155-211)||(6883-6939)
[»] scaffold0093 (1 HSPs)
scaffold0093 (154-214)||(23724-23784)
[»] scaffold0086 (2 HSPs)
scaffold0086 (161-208)||(7554-7600)
scaffold0086 (155-213)||(8288-8346)
[»] scaffold1213 (1 HSPs)
scaffold1213 (155-205)||(1893-1943)
[»] scaffold1207 (1 HSPs)
scaffold1207 (159-205)||(1588-1634)


Alignment Details
Target: chr3 (Bit Score: 475; Significance: 0; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 475; E-Value: 0
Query Start/End: Original strand, 166 - 781
Target Start/End: Original strand, 29856061 - 29856679
Alignment:
Q  166 cgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtttacnnnnnnn---aatccaaaggaccacaattgtttgtaaaatttactcct 262  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||          |||||||||||| ||||||| |||| ||||||||||||    
T  29856061 cgttgacagctggtgtcaacggattcgttgacaccaaatctcagccgtttacttttttttttaatccaaaggacgacaattgcttgttaaatttactcct 29856160  T
Q  263 tgtgctttt-ttcacttgattcccagccgctccatcttctttaacctccttttattctcttatggagaatttgttacgctcagtttcttagattatcaca 361  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29856161 tgtgctttttttcacttgattcggagccgctccatcttctttaacctccttttattctcttatggagaatttgttacgctcagtttcttagattatcaca 29856260  T
Q  362 atttttcttgttcccttctcttttggctaattggtggctaattctaccgattaaattaaaacaacttatgtataaagcttgtgataactattgcaattgg 461  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29856261 atttttcttgttcccttctcttttggctaattggtggctaattctaccgattaaattaaaacaacttatgtataaagcttgtgataactattgcaattag 29856360  T
Q  462 atatgagggtactgaaggcagaagtaattttgttgattttgcatctattgaattaattggtggaattttaggttaaccaccatgattaaatatgtaaatt 561  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29856361 atatgagggtactgaaggcagaagtaattttgttgattttgcttctattgaattaattggtggaattttaggttaaccaccatgattaaatatgtaaatt 29856460  T
Q  562 aaatttatgattttggtaaaatggtaaagcccttaaattgaattgctttcaatcgtcctatagagagaagagatcaataattttcatgtgattgtgtaat 661  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||          |||||||||    
T  29856461 aaatttatgattttggtaaaatggtaaagcccttaaattgaattgctttcaatcctcctatagagagaagagatcaataat----------ttgtgtaat 29856550  T
Q  662 tgaaatcggtgaggagaatactttctttcttggctgcttaa---------agcaggtggaaatcaagtgaaaatagcgcagatgaataattttaacaaac 752  Q
    |||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  29856551 tgaaatcggtgaggagaatactttctttcttggctgcttaaagcagatagagcaggtggaaatcaagtgaaaatagcgcaaatgaataattttaacaaac 29856650  T
Q  753 aattgtagccctttggattaaaaaagtaa 781  Q
    |||||||||||||||||||||||||||||    
T  29856651 aattgtagccctttggattaaaaaagtaa 29856679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 242; E-Value: 1e-133
Query Start/End: Original strand, 155 - 704
Target Start/End: Complemental strand, 31115654 - 31115115
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtttacnnnnnnn-aatccaaaggaccacaattgtttgtaaaa 253  Q
    ||||| ||||||||||||||   |||||||| ||||||||||||||||||||||  |||||||        ||||||||||||||||||||||||| |||    
T  31115654 gagtcgggatccgttgacactaggtgtcaacagattcgttgacaccaaatctcaatcgtttacttttttttaatccaaaggaccacaattgtttgttaaa 31115555  T
Q  254 tttactccttgtgctttttt---cacttgattcccagccgctccatcttctttaacctccttttattctcttatggagaatttgttacgctcagtttctt 350  Q
    |||||||  |||| ||||||   ||||||||| ||| | | |||||||||||||||||||||  ||||||||  ||||||||||||||||||| ||||||    
T  31115554 tttactctctgtgttttttttttcacttgatttccatctgttccatcttctttaacctcctt--attctctttgggagaatttgttacgctcaatttctt 31115457  T
Q  351 agattatcacaatttttcttgtt-------cccttctcttttggctaattggtggctaattctaccgattaaattaaaacaacttatgtataaagcttgt 443  Q
    || || |||||||| ||||||||       |||||||||||  ||||||||||||||||||||||| |||| |||||||||| |||||||||||||| ||    
T  31115456 aggttctcacaattgttcttgtttgcatctcccttctctttgtgctaattggtggctaattctaccaattagattaaaacaatttatgtataaagctagt 31115357  T
Q  444 gataactattgcaattggatatgagggtactgaaggcagaagtaat-tttgttgattttgcatctattgaattaattggtggaattttaggttaaccacc 542  Q
    ||||||||||||||||||                      |||||| |||||||| ||||| |||||||||||||||||||||| ||||| |||||||||    
T  31115356 gataactattgcaattgg----------------------agtaatatttgttgagtttgcttctattgaattaattggtggaaatttagattaaccacc 31115279  T
Q  543 atgattaaatatgtaaattaaatttatgattttggtaaaatggtaaagcccttaaattgaattgctttcaatcgtcctatagagag--aagagatcaata 640  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||  || | |||||||    
T  31115278 atgattgaatatgtaaattaaatttatgattttgataaaatggtaaagcccttaaattgaattgttttcaatcgtcctatagagagaaaaaaaatcaata 31115179  T
Q  641 attttcatgtgattgtgtaattgaaatcggtgaggagaatactttctttcttggctgcttaaag 704  Q
    ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31115178 attatcatgtgattgtgtaattgaaatcggtgaggagaatacattctttcttggctgcttaaag 31115115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 709 - 781
Target Start/End: Complemental strand, 31115070 - 31114998
Alignment:
Q  709 tggaaatcaagtgaaaatagcgcagatgaataattttaacaaacaattgtagccctttggattaaaaaagtaa 781  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  31115070 tggaaatcaagtgaaaatagcccaggtgaataattttaacaaacaattgcggccctttggattaaaaaagtaa 31114998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 45081458 - 45081405
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45081458 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 45081405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 31974654 - 31974702
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31974654 aggatccgttgacaccaagtgtcaacggattcgttgacaccaaatctca 31974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 14871149 - 14871204
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  14871149 aagagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctca 14871204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 48648201 - 48648252
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  48648201 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 48648252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 46150785 - 46150731
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  46150785 agagtcaggatccgttgacactaggtgtcaacggattcgttgacaccaaatctca 46150731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 265152 - 265100
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  265152 agtcatgatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 265100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 303
Target Start/End: Original strand, 31114943 - 31115087
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtttacnnnnnnnaatccaaaggaccacaattgtttgtaaaatt 255  Q
    |||||||||||||| ||||   ||||||||||||||||||| ||||||||||| ||||||||       |||||||||| || ||||||||||| ||| |    
T  31114943 agtcaggatccgttaacac---gtgtcaacggattcgttgataccaaatctcaaccgtttac-ttttttaatccaaagggccgcaattgtttgttaaaat 31115038  T
Q  256 tactc-cttgtgcttttttcacttgattcccagccgctccatcttcttt 303  Q
    || || | || ||| ||||||||||||| |||   ||||||||||||||    
T  31115039 tattcacctgggctattttcacttgatttccaagtgctccatcttcttt 31115087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 37988273 - 37988217
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagcc 211  Q
    |||||||||||| ||||||||  ||||||||| ||||||||||||||||||||||||    
T  37988273 gagtcaggatccattgacaccaggtgtcaacgaattcgttgacaccaaatctcagcc 37988217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 41458030 - 41458090
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    ||||||||||| |||||| |||  ||||||||||||||||||||||||||||||| |||||    
T  41458030 agagtcaggattcgttgataccaggtgtcaacggattcgttgacaccaaatctcaaccgtt 41458090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 21727580 - 21727533
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||    
T  21727580 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 21727533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 51469329 - 51469278
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagcc 211  Q
    |||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  51469329 aggatccgttgacatcaagtgtcaacggattcgttgacaccaaatcttagcc 51469278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 17603171 - 17603217
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||    
T  17603171 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 17603217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 305
Target Start/End: Complemental strand, 29856715 - 29856588
Alignment:
Q  178 gtgtcaacggattcgttgacaccaaatctcagccgtttacnnnnnnnaatccaaaggaccacaattgtttgtaaaatttactc-cttgtgcttttttcac 276  Q
    ||||||||||||||||||||||||||||||| ||||||||       |||||||||| | |||||||||||| ||| ||| ||  ||| ||| |||||||    
T  29856715 gtgtcaacggattcgttgacaccaaatctcaaccgtttac-ttttttaatccaaagggctacaattgtttgttaaaattattcatttgcgctattttcac 29856617  T
Q  277 ttgattcccagccgctccatcttctttaa 305  Q
    |||||| ||| | |||| |||| ||||||    
T  29856616 ttgatttccacctgctctatctgctttaa 29856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 51827548 - 51827498
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||    
T  51827548 agtcaagatccgttgacacctggtgtcaacggattcgttgtcaccaaatct 51827498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 52281763 - 52281817
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||| ||||||||| |||| |||||||||||||||||||||||| ||||||    
T  52281763 agagtcagaatccgttgatacctggtgtcaacggattcgttgacaccagatctca 52281817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 55373762 - 55373712
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||||    
T  55373762 agagtcaggattcgttgacaccaggtgtcaacggattcgttgacaccaaat 55373712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 54458715 - 54458670
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  54458715 aggatccgttgacacctggtgtcaacggattggttgacaccaaatc 54458670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 10847289 - 10847348
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||||||||||||| ||||||||| ||||||| |||| ||||| || |||||    
T  10847289 gagtcaggatccgttgacacctggtgtcaacgaattcgttaacactaaatcacatccgtt 10847348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 20213587 - 20213536
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||||||||||  ||||| ||| ||||||||||||||||||    
T  20213587 agagtcaggatccgttgacaccaggtgtcgacgaattcgttgacaccaaatc 20213536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 37520614 - 37520563
Alignment:
Q  157 gtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||| |||  ||||||||| |||||||||||||||||||||    
T  37520614 gtcaggatccgttgataccaggtgtcaacgaattcgttgacaccaaatctca 37520563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 48413312 - 48413367
Alignment:
Q  150 aacaagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||| |||||  |||||||||  ||||||||||||||||||||||||||||    
T  48413312 aacaagagtaaggatttgttgacaccaggtgtcaacggattcgttgacaccaaatc 48413367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 48507088 - 48507029
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||| |||||||||||||||||  ||||||| | ||||||||||||||||||||| ||||    
T  48507088 agagacaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaaccgt 48507029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 981673 - 981723
Alignment:
Q  163 atccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||| ||||    
T  981673 atccgttgacaccaggtgtcaacgaattcgttgacaccaaatctcaaccgt 981723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 13477055 - 13477105
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||||||||||  ||||||||| |||| |||||||||||||    
T  13477055 gagtcaggatccgttgacaccaggtgtcaacgaattcattgacaccaaatc 13477105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 20212978 - 20213028
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||| |||||||||||||  ||||||||| ||||||||||||||||||    
T  20212978 gagtcagaatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 20213028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 41474648 - 41474706
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||| ||||||||||||| || ||||||||||||||||| |||| |||||||| ||||    
T  41474648 gagtctggatccgttgacatctggtgtcaacggattcgtttacacaaaatctcaaccgt 41474706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 48764475 - 48764533
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||| |||||| |  ||||||||| ||||||||||||||||||||| ||||    
T  48764475 gagtcaggatccattgacatcaggtgtcaacgaattcgttgacaccaaatctcaaccgt 48764533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 48765124 - 48765074
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||| ||||||||  ||||||| |||||||||||||||||||||    
T  48765124 agtcaggatccattgacaccaggtgtcaatggattcgttgacaccaaatct 48765074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 52266508 - 52266450
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||||||||||||| |||||  |||| |||| ||||||||||||||||||||| ||||    
T  52266508 gagtcaggatccgttaacaccaggtgttaacgaattcgttgacaccaaatctcaaccgt 52266450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 48506443 - 48506539
Alignment:
Q  162 gatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtttacnnnnnnnaatccaaaggaccacaattgtttgtaaaatttactc 260  Q
    ||||||||||||| | ||||||||| ||||||||||||||||||||| |||| ||        |||||||||| ||| |||||||||| ||||||||||    
T  48506443 gatccgttgacac-tggtgtcaacgaattcgttgacaccaaatctcaaccgtcta-tatttttaatccaaaggtccataattgtttgttaaatttactc 48506539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 48649226 - 48649177
Alignment:
Q  157 gtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||| ||||||||  |||||||| ||||||||||||||||||||    
T  48649226 gtcaggatccattgacaccaggtgtcaacagattcgttgacaccaaatct 48649177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 44699874 - 44699826
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||| | |||||||  |||||||||||||||||||||||||||    
T  44699874 agtcaggatcagctgacaccaggtgtcaacggattcgttgacaccaaat 44699826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 17605715 - 17605762
Alignment:
Q  166 cgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||||||||  ||||||||||||||||||||||||||| ||| ||||    
T  17605715 cgttgacaccaggtgtcaacggattcgttgacaccaaatttcaaccgt 17605762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 33277560 - 33277509
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||| |||||||||||||  ||||||||| ||||||| ||||||||||    
T  33277560 agagtcagaatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 33277509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 213
Target Start/End: Original strand, 44699882 - 44699917
Alignment:
Q  178 gtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||||||||||||||||||||||||||||| ||||    
T  44699882 gtgtcaacggattcgttgacaccaaatctcaaccgt 44699917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 13477820 - 13477774
Alignment:
Q  168 ttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    ||||||||  ||||||||| ||||||||||||||||||||| |||||    
T  13477820 ttgacaccaggtgtcaacgaattcgttgacaccaaatctcaaccgtt 13477774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 17604011 - 17603965
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||  |||||||  |||||||||||||||||||||||||||||    
T  17604011 aggatccaatgacaccaggtgtcaacggattcgttgacaccaaatct 17603965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 27082774 - 27082824
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||| |||||||   ||||||||| ||||||||||||||||||    
T  27082774 gagtcaggatccattgacactaggtgtcaacgaattcgttgacaccaaatc 27082824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 33276890 - 33276940
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||| ||| ||| || ||||||| ||||||||||||||||||||    
T  33276890 gagtcaggatctgttaacatctggtgtcaatggattcgttgacaccaaatc 33276940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 37987238 - 37987280
Alignment:
Q  162 gatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||||  ||||||| |||||||||||||||||||    
T  37987238 gatccgttgacaccaggtgtcaatggattcgttgacaccaaat 37987280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 40872856 - 40872814
Alignment:
Q  162 gatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  40872856 gatccgttgacaccaggtgtcaacggattcattgacaccaaat 40872814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 46149633 - 46149678
Alignment:
Q  161 ggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||| ||||||||  ||||||| |||||||||||||||||||||    
T  46149633 ggatccattgacaccaggtgtcaatggattcgttgacaccaaatct 46149678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 52282459 - 52282418
Alignment:
Q  163 atccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||  |||||||||||||| ||||||||||||    
T  52282459 atccgttgacaccaggtgtcaacggattcattgacaccaaat 52282418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 52605538 - 52605489
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||||||  ||||||||| ||||| ||| |||||||    
T  52605538 gagtcaggatccgttgacaccaggtgtcaacgaattcgatgataccaaat 52605489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 3e-97; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 186 - 471
Target Start/End: Complemental strand, 39803574 - 39803273
Alignment:
Q  186 ggattcgttgacaccaaatctcagccgtttacnnnnnnn-aatccaaaggaccacaattgtttgtaaaatttactccttgtgcttttttcacttgattcc 284  Q
    |||| |||||||||||||||||| ||||||||        ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  39803574 ggatccgttgacaccaaatctcaaccgtttacttttttttaatccaaaggaccacaattgtttgttaaatttactccttatgcttttttcacttgattcc 39803475  T
Q  285 cagccgctccatctt----------------ctttaacctccttttattctcttatggagaatttgttacgctcagtttcttagattatcacaatttttc 368  Q
     | ||||||||||||                |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39803474 taaccgctccatctttttaacgctccatcttctttaacctccttttattctcttatggagaatttgttatgctcagtttcttagattatcacaatttttc 39803375  T
Q  369 ttgttcccttctcttttggctaattggtggctaattctaccgattaaattaaaacaacttatgtataaagcttgtgataactattgcaattggatatgag 468  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39803374 ttgttcccttctcttttggctaattggtggctaattctatcgattaaattaaaacaacttatgtat-aagcttgtgataactattgcaattggatatgag 39803276  T
Q  469 ggt 471  Q
    |||    
T  39803275 ggt 39803273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 819 - 993
Target Start/End: Complemental strand, 22606593 - 22606419
Alignment:
Q  819 tttaaacaattatcaaactttggttataaacttccaaatttaatccatttattgcttccatctatttaaatattagataattgtcatcataatttaggaa 918  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  22606593 tttaaacaattatcaaactttggttataaacttccaaatttaatccatttattgcttccatctatttaaatatcagataattgtcatcataatttacgaa 22606494  T
Q  919 tccaaaactatatgagagctcgctatcttaaggcattagctttatgagtcttcacatttatatattcttcgacat 993  Q
    |||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||    
T  22606493 tccaaaactatatgagagctcattatcttaaggcattagccttacgagtcttcacatttatatattgttccacat 22606419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 22606789 - 22606658
Alignment:
Q  1 tgtttcaccgtaagttttgctggttgtttttctggtttcgtttgctgagtatgtttctgtgtcgagaaatgttagaaacactctctttcgagcgcactct 100  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22606789 tgtttcaccataagttt-gctggttgtttttctggtttcgtttggtgagtatgtttctgtgtcgagaaatgttagaaacactctctttctagcgcactct 22606691  T
Q  101 ctgacactcacatacaaatgataagataataca 133  Q
    || ||||||||||||||||||||||||| ||||    
T  22606690 ctaacactcacatacaaatgataagatagtaca 22606658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 26636099 - 26636158
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  26636099 agagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgt 26636158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 25599019 - 25599072
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  25599019 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 25599072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 46428184 - 46428237
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  46428184 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 46428237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 7668480 - 7668532
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  7668480 agtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 7668532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 37949601 - 37949661
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  37949601 agagacaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgtt 37949661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 19067638 - 19067693
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  19067638 caggatccgttgacaccacgtgtcaacggattcgttgacaccaaatctcaaccgtt 19067693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 30661506 - 30661451
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  30661506 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgtt 30661451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 25342493 - 25342547
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  25342493 agagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 25342547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 30660589 - 30660643
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  30660589 agagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 30660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 25343300 - 25343353
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  25343300 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 25343353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 26636914 - 26636857
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||    
T  26636914 agtcaggatccgttgacacaaggtgtcaacggattcgttgacaccaaatctcaaccgt 26636857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 37950522 - 37950469
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  37950522 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 37950469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 45099948 - 45099899
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  45099948 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 45099899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 14686133 - 14686181
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  14686133 aggatccgttgacaccaagtgtcaacggatttgttgacaccaaatctca 14686181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 13785644 - 13785597
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||    
T  13785644 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 13785597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 3772581 - 3772523
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||| ||||||||||||||||  ||||||||| ||||||||||||||||||||| ||||    
T  3772581 gagttaggatccgttgacaccaggtgtcaacgtattcgttgacaccaaatctcaaccgt 3772523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 21497035 - 21496977
Alignment:
Q  158 tcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||||||||||||||| |  ||||||||| ||||||||||||||||||||| |||||||    
T  21497035 tcaggatccgttgacaacaggtgtcaacgaattcgttgacaccaaatctcaaccgttta 21496977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 25343295 - 25343241
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||||  ||||||| | |||||||||||||||||||||    
T  25343295 agagtcaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctca 25343241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 46428873 - 46428819
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||||  ||||||||| ||||||||||| |||||||||    
T  46428873 agagtcaggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatctca 46428819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 27948443 - 27948496
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  27948443 gagttaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctca 27948496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 36378809 - 36378858
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||||||    
T  36378809 gagtcaggatctgttgacacctggtgtcgacggattcgttgacaccaaat 36378858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 3903393 - 3903345
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  3903393 agtcaggatccgttgacaccaggtgtcaacggatccgttgacaccaaat 3903345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 18977823 - 18977771
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||| ||||||||  ||||||||||||||||| |||||||||||||    
T  18977823 agtcaggatccattgacaccaggtgtcaacggattcgttaacaccaaatctca 18977771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 24389666 - 24389618
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  24389666 aggatccgttgacaccaggtgtcaacggattcattgacaccaaatctca 24389618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 40273556 - 40273616
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    ||||| ||||||||||||||||  ||||||| | ||||||||||||||||||||| |||||    
T  40273556 agagttaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaaccgtt 40273616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 43065164 - 43065120
Alignment:
Q  162 gatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  43065164 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 43065120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 3689327 - 3689276
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||| ||||||||||||||||||  ||||||| |||||||||||||||||||    
T  3689327 agagacaggatccgttgacacctgatgtcaacagattcgttgacaccaaatc 3689276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 19068446 - 19068391
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||| ||| |||||    
T  19068446 caggatccgttgacaccaggtgtcaacgtattcgttgacaccaaatttcaaccgtt 19068391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 1417610 - 1417656
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||    
T  1417610 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatct 1417656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 25599874 - 25599816
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||||||||||||  |||||||  ||||| |||||||||||||||| ||||    
T  25599874 gagtcaggatccgttgacaccaggtgtcaatagattcattgacaccaaatctcatccgt 25599816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 38226025 - 38225979
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||    
T  38226025 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatct 38225979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 47719754 - 47719708
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||    
T  47719754 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatct 47719708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 3029248 - 3029203
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||||  ||||||||| ||||||||||||||||||    
T  3029248 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 3029203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 16664180 - 16664127
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  |||||||||||| ||||||||| ||||||||    
T  16664180 gagttaggatccgttgacaccaggtgtcaacggatccgttgacactaaatctca 16664127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 17638540 - 17638487
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  |||||||||||| ||||||||| ||||||||    
T  17638540 gagttaggatccgttgacaccaggtgtcaacggatccgttgacactaaatctca 17638487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 23889861 - 23889812
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||| ||||||||| ||||| ||||||||| |||||||||||||||||    
T  23889861 gagtcaagatccgttggcacctggtgtcaacgaattcgttgacaccaaat 23889812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 31278204 - 31278159
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||||   |||||||||||||||||||||||||||    
T  31278204 aggatccgttgacaccagatgtcaacggattcgttgacaccaaatc 31278159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 37395554 - 37395505
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||| ||||||||||||||||  ||||||||||||||||| |||||||||    
T  37395554 gagttaggatccgttgacaccaggtgtcaacggattcgttaacaccaaat 37395505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 45161966 - 45162019
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||| ||||||||  |||| ||||||||||||||||||||||||||    
T  45161966 gagttaggatccattgacaccaggtgttaacggattcgttgacaccaaatctca 45162019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 24581046 - 24581093
Alignment:
Q  158 tcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||| ||||||||   |||||||||||||||||||||||||||||||    
T  24581046 tcaggatcagttgacac---gtgtcaacggattcgttgacaccaaatctca 24581093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 24719337 - 24719381
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||||||   ||||||||||||||||||||||||||    
T  24719337 aggatccgttgacaccagatgtcaacggattcgttgacaccaaat 24719381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 3688385 - 3688432
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||||   | ||||||||||||||||||||||||||    
T  3688385 caggatccgttgacaccagatatcaacggattcgttgacaccaaatct 3688432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 14305092 - 14305138
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||   |||||||||||||| ||||||||||||||    
T  14305092 aggatccgttgacactaggtgtcaacggattcattgacaccaaatct 14305138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 37706424 - 37706474
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||| ||||||||  || |||||||||||||| |||||||||    
T  37706424 agagtcaggatccattgacaccaggtatcaacggattcgttaacaccaaat 37706474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 45931273 - 45931219
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||| |||||||||| |||||   ||||||||||| ||||||||||||||||||    
T  45931273 agagttaggatccgttaacaccatatgtcaacggatccgttgacaccaaatctca 45931219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 208
Target Start/End: Original strand, 23889867 - 23889896
Alignment:
Q  179 tgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||||||||||||    
T  23889867 tgtcaacggattcgttgacaccaaatctca 23889896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 208
Target Start/End: Original strand, 23902062 - 23902091
Alignment:
Q  179 tgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||||||||||||    
T  23902062 tgtcaacggattcgttgacaccaaatctca 23902091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 24453775 - 24453730
Alignment:
Q  161 ggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||| ||||||||||  ||||||||||||| |||||||||||||||    
T  24453775 ggattcgttgacaccaggtgtcaacggatttgttgacaccaaatct 24453730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 45099136 - 45099185
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||||||| |  ||||||||| ||||||| ||||||||||    
T  45099136 agtcaggatccgttgacatcaggtgtcaacgaattcgttaacaccaaatc 45099185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 3e-20; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 30664031 - 30663972
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  30664031 gagtcaggatccgttgacacctggtgtcaacggattcgttgacaccaaatctcaaccgtt 30663972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 30663353 - 30663414
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||||||||||||||  || |||||||||||||||||||||||||||| |||||    
T  30663353 aagagtcaggatccgttgacaccaggtatcaacggattcgttgacaccaaatctcaaccgtt 30663414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 4439256 - 4439208
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4439256 aggatccgttgacacctggtgtcaacggattcgttgacaccaaatctca 4439208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 25469142 - 25469090
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  25469142 agagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 25469090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 13263572 - 13263513
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||| ||||    
T  13263572 agagtcaggatccgttgacaccaggtgtcaatggattcgttgacaccaaatctcaaccgt 13263513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 34309281 - 34309226
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  34309281 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgtt 34309226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 11704863 - 11704810
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  11704863 gagttaggatccattgacaccaagtgtcaacggattcgttgacaccaaatctca 11704810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 28181535 - 28181588
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  28181535 aggatccgttgacacctggtgtcaacgaattcgttgacaccaaatctcaaccgt 28181588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 49680808 - 49680861
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  49680808 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 49680861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 4433897 - 4433849
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  4433897 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 4433849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 7558451 - 7558499
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  7558451 aggatccgttgacaccaagtgtcaacggatttgttgacaccaaatctca 7558499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 25671165 - 25671217
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||||    
T  25671165 aagagtcaggatccgttgacacctggtgttaacggattcgttaacaccaaatc 25671217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 10121609 - 10121554
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  10121609 aagagttaggatccgttgacaccaggtgtcaacggattggttgacaccaaatctca 10121554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 13262828 - 13262883
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||| ||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  13262828 aagagttaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctca 13262883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 19171774 - 19171825
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  19171774 agagtcgggatccgttgacatcaagtgtcaacggattcgttgacaccaaatc 19171825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 36389773 - 36389824
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctc 207  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  36389773 agtcaggatccgttgacacctggtgtcaacggatttgctgacaccaaatctc 36389824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 550 - 608
Target Start/End: Original strand, 8473499 - 8473556
Alignment:
Q  550 aatatgtaaattaaatttatgattttggtaaaatggtaaagcccttaaattgaattgct 608  Q
    ||||||||||||||||||||| ||||| ||||||||||||| |||| ||||||||||||    
T  8473499 aatatgtaaattaaatttatggttttgataaaatggtaaag-ccttcaattgaattgct 8473556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 19172630 - 19172580
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  19172630 gagtcaggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 19172580  T

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Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 25468507 - 25468565
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||| ||||||||  |||||||||||||| |||||||||||||||| ||||    
T  25468507 gagtcaggatccattgacaccaggtgtcaacggattcattgacaccaaatctcaaccgt 25468565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 30932851 - 30932797
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||| ||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  30932851 agagtgaggatccgttgacaccaggtgtcaacggattcgttggcaccaaatctca 30932797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 37852521 - 37852579
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    ||||||||||||||||||||| ||||||||| ||||||| |||||||||| || |||||    
T  37852521 agtcaggatccgttgacacctggtgtcaacgaattcgttaacaccaaatcacatccgtt 37852579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 7406242 - 7406295
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||||||  |||| |||| |||||||||||||||||||||    
T  7406242 gagtcaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatctca 7406295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 7559250 - 7559201
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||  |||||||||||| ||||||||||||||||||    
T  7559250 caggatccgttgacaccaggtgtcaacggatccgttgacaccaaatctca 7559201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 8987787 - 8987840
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  8987787 gagtcaggatcggttgacatcaggtgtcaacggattcgttgacaccaaatctca 8987840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 168892 - 168948
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    ||||||||||||||||  |||||| ||||||| |||||||||||||||| |||||||    
T  168892 aggatccgttgacaccaggtgtcagcggattcattgacaccaaatctcaaccgttta 168948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 9779027 - 9778975
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctc 207  Q
    |||||||||||||||||||||| ||||||||||||   |||||||||||||||    
T  9779027 gagtcaggatccgttgacacctggtgtcaacggatagtttgacaccaaatctc 9778975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 25672080 - 25672028
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||| ||||||    
T  25672080 agagtcaggatccgttgacaccaagtgtcaatagattcgttgacactaaatct 25672028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 34308469 - 34308529
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||| |||||||||||||||||  ||||||||| ||||||||||||||||| ||| |||||    
T  34308469 agagacaggatccgttgacaccaggtgtcaacgtattcgttgacaccaaatttcaaccgtt 34308529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 10120771 - 10120830
Alignment:
Q  146 tttaaacaagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||| | |||| ||||||||||||||||  ||||||||||||| ||||||||||||||    
T  10120771 tttaaaaatgagttaggatccgttgacaccaggtgtcaacggattggttgacaccaaatc 10120830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 27256763 - 27256708
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||| ||| |||||    
T  27256763 caggatccgttgacaccaggtgtcaacgtattcgttgacaccaaatttcaaccgtt 27256708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 11548800 - 11548850
Alignment:
Q  158 tcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||  |||||||| ||||||||||||| ||||||||    
T  11548800 tcaggatccgttgacaccaggtgtcaacagattcgttgacactaaatctca 11548850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 47967864 - 47967910
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||    
T  47967864 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatct 47967910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 17172712 - 17172667
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||||  |||||||||||||||||||| |||||||    
T  17172712 aggatccgttgacaccaggtgtcaacggattcgttgacgccaaatc 17172667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 24991972 - 24992017
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||    
T  24991972 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 24992017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 37853190 - 37853141
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||||| ||| |  |||||||||||||||||||||||||||    
T  37853190 gagtcaggatccgttaacatcaggtgtcaacggattcgttgacaccaaat 37853141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 46391917 - 46391872
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||    
T  46391917 caggatccgttgacaccaggtgtcaacggattcgttgacatcaaat 46391872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 50271840 - 50271787
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||||||||||  || |||| | |||||||||||||||||||    
T  50271840 aagagtcaggatccgttgacaccaggtatcaatgaattcgttgacaccaaatct 50271787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 17171933 - 17171977
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||    
T  17171933 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 17171977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 32038472 - 32038532
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||| |||||| ||||| |||  ||||||||| ||||||||||||||||||||| ||||    
T  32038472 aagagttaggatcggttgataccaggtgtcaacgaattcgttgacaccaaatctcaaccgt 32038532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 8988596 - 8988545
Alignment:
Q  162 gatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||| |||||||  |||||||||||||| |||||||||||||||| ||||    
T  8988596 gatccgctgacaccaggtgtcaacggattccttgacaccaaatctcaaccgt 8988545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 12760773 - 12760832
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||| ||||||||||||||||| ||||||||| ||||||| ||| |||||| || |||||    
T  12760773 gagttaggatccgttgacacctggtgtcaacgaattcgttaacatcaaatcacatccgtt 12760832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 28182127 - 28182076
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||| |||||| |||||||||  |||||||||||||| ||||||||||||||    
T  28182127 gagtgaggatctgttgacaccaggtgtcaacggattctttgacaccaaatct 28182076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 213
Target Start/End: Complemental strand, 46812219 - 46812184
Alignment:
Q  178 gtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||||||||||||||||||||||||||||| ||||    
T  46812219 gtgtcaacggattcgttgacaccaaatctcaaccgt 46812184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 36390422 - 36390372
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||| ||||||||||||||||  ||||||||| || |||||||||||||||    
T  36390422 gagttaggatccgttgacaccaggtgtcaacgaatccgttgacaccaaatc 36390372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 45818025 - 45818067
Alignment:
Q  162 gatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  45818025 gatccgttgacaccaggtgtcaacggattcattgacaccaaat 45818067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 13142722 - 13142673
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||| ||||||| ||||||||  |||||||||||||||||||||| ||||    
T  13142722 gagttaggatcccttgacaccaggtgtcaacggattcgttgacactaaat 13142673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 201
Target Start/End: Original strand, 26118671 - 26118716
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacacca 201  Q
    ||||||||||||||||||||   |||||||||||| ||||||||||    
T  26118671 agtcaggatccgttgacaccagatgtcaacggatttgttgacacca 26118716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 46909416 - 46909367
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||||||||   ||||||| ||||| |||||||||||||    
T  46909416 agtcaggatccgttgacaccagatgtcaacagattcattgacaccaaatc 46909367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 51; Significance: 1e-19; HSPs: 3)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 15020 - 15078
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  15020 gagtcaggatccgttgacacctagtgtcaacggattcattgacaccaaatctcaaccgt 15078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 15080 - 15137
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  15080 agtcaggatccgttgacacctagtgtcaacggattcattgacaccaaatctcaaccgt 15137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #3
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 22126 - 22076
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||||||    
T  22126 agagacaggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 22076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 2e-18; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 41974638 - 41974694
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagcc 211  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  41974638 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcagcc 41974694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 8373748 - 8373698
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8373748 agagtcaggatccgttgacaccaagtgtcaacggattcgttgacaccaaat 8373698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 37732823 - 37732872
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaa 203  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  37732823 agagtcaggatccgttgacacctggtgtcaacggattcgttgacaccaaa 37732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 9197875 - 9197824
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  9197875 agagtcaggatccgttgacaccaagtgtcaacgaattcgttgacaccaaatc 9197824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 8372915 - 8372960
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  8372915 caggatccgttgacacctggtgtcaacggattcgttgacaccaaat 8372960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 38576356 - 38576303
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  38576356 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 38576303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 3165176 - 3165120
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagcc 211  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  3165176 gagtcaggatccgttgacatcaggtgtcaacggattcgttgacaccaaatctaagcc 3165120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 11687020 - 11686960
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||    
T  11687020 aagagttaggatccgttgacacctggtgtcaacgaattcgttgacactaaatctcaaccgt 11686960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 22320371 - 22320423
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||||  ||  |||||||||||||||||||||||||||||    
T  22320371 agagtcaggatccgttgatgccaggtgtcaacggattcgttgacaccaaatct 22320423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 31641508 - 31641560
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||| ||||||||  ||||||| |||||||||||||||||||||    
T  31641508 agagtcaggatccattgacaccaggtgtcaatggattcgttgacaccaaatct 31641560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 37025009 - 37025056
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  37025009 aggatccgttgacacc-agtgtcaacagattcgttgacaccaaatctca 37025056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 15198346 - 15198295
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||| ||||||||| ||||||||| ||| |||||||||||||    
T  15198346 aagagtcaggatcctttgacacctggtgtcaacgaatttgttgacaccaaat 15198295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 26654432 - 26654381
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||| ||||||||||||||  ||||||| |||||||||||||||||||||    
T  26654432 gagtcaagatccgttgacaccaggtgtcaatggattcgttgacaccaaatct 26654381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 31602013 - 31602072
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||| |||||| |||||||||  ||||||||| ||||||||||||||||||||| ||||    
T  31602013 agagttaggatcggttgacaccaggtgtcaacgaattcgttgacaccaaatctcaaccgt 31602072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 9197093 - 9197143
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||| |||||||||||||  ||||||||| ||||||||||||||||||    
T  9197093 gagtcagaatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 9197143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 17724767 - 17724813
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||    
T  17724767 caggatcagttgacacctggtgtcaacagattcgttgacaccaaatc 17724813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 26652291 - 26652341
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||||||||||  ||||||||| ||||||| ||||||||||    
T  26652291 gagtcaggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 26652341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 31642141 - 31642083
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||| ||||||||   |||||||| ||||||||||||||||||||| ||||    
T  31642141 gagtcaggatccattgacaccagatgtcaacgaattcgttgacaccaaatctcaaccgt 31642083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 32414573 - 32414527
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||    
T  32414573 aggatctgttgacaccaggtgtcaacggattcgttgacaccaaatct 32414527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 8997028 - 8996975
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||| |||  |||||||| |||| |||||||||||||||||    
T  8997028 gagtcaggatccgttgataccaggtgtcaactgatttgttgacaccaaatctca 8996975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 39778915 - 39778975
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    ||||||||||||| ||||||||  ||||||||| ||||||| |||||||||| || |||||    
T  39778915 agagtcaggatccattgacaccaggtgtcaacgaattcgttaacaccaaatcacatccgtt 39778975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 3417355 - 3417406
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||| ||||||| || |||| |||| |||||||||||||||||||    
T  3417355 gagtcaggatctgttgacatctggtgttaacgaattcgttgacaccaaatct 3417406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 11686224 - 11686275
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||| ||||||| ||| ||||  |||||||||||||||||||||||||||||    
T  11686224 gagttaggatccattggcaccaggtgtcaacggattcgttgacaccaaatct 11686275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 17725709 - 17725658
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||| ||||||||||||||| |  ||||||||| ||||||||||||||||||    
T  17725709 agagacaggatccgttgacagcaggtgtcaacgaattcgttgacaccaaatc 17725658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 32979879 - 32979828
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||||||||||  ||||||||| ||| ||| ||||||||||    
T  32979879 agagtcaggatccgttgacaccaggtgtcaacgaatttgttaacaccaaatc 32979828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 39779895 - 39779836
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||| ||||||||  ||||||||| ||||||| |||||||||| || |||||    
T  39779895 gagtcaggatccattgacaccaggtgtcaacgaattcgttaacaccaaatcacatccgtt 39779836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 3043240 - 3043290
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||| ||||||||||||||||| ||||||||  |||| |||||||||||||    
T  3043240 gagttaggatccgttgacacctggtgtcaacaaattcattgacaccaaatc 3043290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 14825641 - 14825691
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||| |||||||||||||||   ||||||||||||||||||||| ||||||    
T  14825641 gagttaggatccgttgacactaggtgtcaacggattcgttgacatcaaatc 14825691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 27441469 - 27441515
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||  ||||||||| ||||||||||| |||||||    
T  27441469 aggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatct 27441515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 27442195 - 27442145
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||||||||||  ||||||||| || |||| ||||||||||    
T  27442195 gagtcaggatccgttgacaccaggtgtcaacgaatccgttaacaccaaatc 27442145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 39860112 - 39860161
Alignment:
Q  159 caggatccgttgacacctagtgtcaac--ggattcgttgacaccaaatct 206  Q
    |||||||||||||||||  ||||||||  |||||||||||||||||||||    
T  39860112 caggatccgttgacaccaggtgtcaacaaggattcgttgacaccaaatct 39860161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 3044019 - 3043970
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||| ||||||||| ||||||  ||||||||| |||||||||||||||||    
T  3044019 gagttaggatccgtcgacaccaggtgtcaacgaattcgttgacaccaaat 3043970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 37064815 - 37064864
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||| |||||||||  ||||||||| |||| |||||||||||||    
T  37064815 agtcaggatctgttgacaccaggtgtcaacgaattcattgacaccaaatc 37064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 6e-18; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 26529568 - 26529509
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  26529568 agagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgt 26529509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 10171273 - 10171331
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  10171273 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgt 10171331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 18227729 - 18227778
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18227729 gagtcaggatccgttgacacc-agtgtcaacggattcgttgacaccaaatc 18227778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 8488464 - 8488525
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||| ||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||    
T  8488464 aagagttaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgtt 8488525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 10172021 - 10171962
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||| ||||    
T  10172021 agagttaggatccgttgacaccaggtgtcaacgcattcgttgacaccaaatctcaaccgt 10171962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 11434513 - 11434458
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||| ||||||| ||||| | ||||||||||||||||||||||||||||||    
T  11434513 aagagtcagtatccgttaacaccaaatgtcaacggattcgttgacaccaaatctca 11434458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 33435337 - 33435388
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||| ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  33435337 gagttaggatccgttgacacctggtgttaacggattcgttgacaccaaatct 33435388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 19311880 - 19311830
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  19311880 agtcaggattcgttgacaccaggtgtcaacggattcgttgacaccaaatct 19311830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 26528820 - 26528878
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||| ||||||||||||||||  ||||||||| ||||||||||||||||||||| ||||    
T  26528820 gagttaggatccgttgacaccaggtgtcaacgcattcgttgacaccaaatctcaaccgt 26528878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 33436327 - 33436277
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  33436327 agtcaggatccgttgacaccagatgtcaacggattcgttgacaccaaatct 33436277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 19310998 - 19311051
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||||||  |||| |||||||| |||||||||||||||||    
T  19310998 gagtcaggatccgttgacaccaggtgttaacggatttgttgacaccaaatctca 19311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 19323817 - 19323768
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  19323817 caggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctca 19323768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 3623170 - 3623233
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||||| |||||||||||||| |  ||||||||| |||| |||||||||||||||| |||||||    
T  3623170 aagagttaggatccgttgacatcaggtgtcaacgaattctttgacaccaaatctcaaccgttta 3623233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 8489334 - 8489275
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||||||||||||  ||||||||| ||||||| |||||||||| || |||||    
T  8489334 gagtcaggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatcacatccgtt 8489275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 19322990 - 19323033
Alignment:
Q  165 ccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||  |||||||||||||||||||||||||||||||    
T  19322990 ccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 19323033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 9441233 - 9441287
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| |||||| ||||||||||  |||||||||||| ||||||||||||||||||    
T  9441233 agagacaggattcgttgacaccaggtgtcaacggatccgttgacaccaaatctca 9441287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 2512439 - 2512484
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||    
T  2512439 caggatccgttgacacctgatgtcaacgaattcgttgacaccaaat 2512484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 19653967 - 19654028
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||||| |||| |||||||||| ||||||| ||| ||||||||||||||||| | |||||||    
T  19653967 gagtcaagatctgttgacacctggtgtcaatggactcgttgacaccaaatcttaaccgttta 19654028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 21133281 - 21133220
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||| ||||||||||||||||  |||| |||| ||||||||||||||||||| | |||||||    
T  21133281 gagttaggatccgttgacaccatgtgttaacgaattcgttgacaccaaatcttaaccgttta 21133220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 1366964 - 1367014
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||| ||||||||||||||  |  |||||||||||||||||||||||||||    
T  1366964 agagacaggatccgttgacttcaggtgtcaacggattcgttgacaccaaat 1367014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 12344891 - 12344949
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||| ||||||| ||||||||  |||||||| |||||||||| ||||||||||| ||||    
T  12344891 gagttaggatccattgacaccaggtgtcaacagattcgttgataccaaatctcaaccgt 12344949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 505534 - 505583
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||| ||||||| |  |||||||| ||||||||||||||||||    
T  505534 gagtcaggatctgttgacatcaggtgtcaacagattcgttgacaccaaat 505583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 3623801 - 3623740
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||| ||||||||||||||||   ||| |||| |||||||||||||||||| || |||||||    
T  3623801 gagttaggatccgttgacaccagatgttaacgaattcgttgacaccaaatcgcaaccgttta 3623740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 25060813 - 25060866
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  |||||||| |||||||| |||| ||||||||    
T  25060813 gagttaggatccgttgacaccaggtgtcaacagattcgttaacacaaaatctca 25060866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 3e-17; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 4084876 - 4084930
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  4084876 agagtcaggatccgttgacacctggtgtcaacgaattcgttgacaccaaatctca 4084930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 29046025 - 29046079
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  29046025 agagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 29046079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 19128767 - 19128828
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||| | |||||||    
T  19128767 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatcttaaccgttta 19128828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 234697 - 234747
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  234697 agagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 234747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 6476846 - 6476792
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  6476846 agagacaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 6476792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 28705933 - 28705875
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||||||||||||  |||||||||||||||||||||| |||||||| ||||    
T  28705933 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacactaaatctcaaccgt 28705875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 29087921 - 29087975
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||||||||    
T  29087921 agagtcaggatccgttgacaccaggtgtcaacggattcattgacaccaaatctca 29087975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 237875 - 237826
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  237875 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 237826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 19359701 - 19359750
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  19359701 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 19359750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 235589 - 235647
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||| ||||||| ||||||||  ||||||||||||||||||||||||||||||| ||||    
T  235589 gagttaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgt 235647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 7632097 - 7632143
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||    
T  7632097 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatct 7632143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 17071221 - 17071282
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||| |||||||||||||| |  ||||||||| ||||||||||||||||||||| |||||||    
T  17071221 gagttaggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaaccgttta 17071282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 19360530 - 19360481
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  19360530 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 19360481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 27364537 - 27364488
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  27364537 caggatccgttgacaccaggtgtcaatggattcgttgacaccaaatctca 27364488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 28705162 - 28705215
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||| |||||||||||||  ||||||||||||||||| |||||||||||||    
T  28705162 gagtcagtatccgttgacaccaggtgtcaacggattcgtttacaccaaatctca 28705215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 13306325 - 13306273
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||| ||||||    
T  13306325 aagagtcaggatccgttgacacctgatgtcaacgaattcgttgacatcaaatc 13306273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 14478919 - 14478967
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||| |  |||||||||||||||||||||||||||    
T  14478919 agtcaggatccgttgacatcaggtgtcaacggattcgttgacaccaaat 14478967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 34600263 - 34600319
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||||||||||||| |  ||||||||| ||||||||||||||||||||| |||||||    
T  34600263 aggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaaccgttta 34600319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 10554550 - 10554597
Alignment:
Q  161 ggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||||    
T  10554550 ggattcgttgacaccaggtgtcaacggattcgttgacaccaaatctca 10554597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 236983 - 236925
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||| ||||||| ||||||||  |||||||||||||||| |||||||||||||| ||||    
T  236983 gagttaggatccattgacaccaggtgtcaacggattcgtagacaccaaatctcaaccgt 236925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 1281838 - 1281884
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||    
T  1281838 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatct 1281884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 1554132 - 1554086
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||    
T  1554132 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatct 1554086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 10554523 - 10554565
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacacca 201  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  10554523 caggatccgttgacaccaggtgtcaacggattcgttgacacca 10554565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 17071849 - 17071787
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    ||||| ||||||||||||||||  |||| |||| |||||||||||||||||| || |||||||    
T  17071849 agagttaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatcgcaaccgttta 17071787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 25858207 - 25858257
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||| ||||||||||||||   ||||||||||||||||||||||||||||    
T  25858207 gagtcgggatccgttgacactaggtgtcaacggattcgttgacaccaaatc 25858257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 34709088 - 34709038
Alignment:
Q  158 tcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||| |||||||||  |||||||||||||||||| ||||||||||||    
T  34709088 tcaggatctgttgacaccaggtgtcaacggattcgttggcaccaaatctca 34709038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 1283548 - 1283503
Alignment:
Q  161 ggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||    
T  1283548 ggattcgttgacaccaggtgtcaacggattcgttgacaccaaatct 1283503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 1283574 - 1283533
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacacca 201  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  1283574 aggatccgttgacaccaggtgtcaacggattcgttgacacca 1283533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 9407261 - 9407298
Alignment:
Q  169 tgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  9407261 tgacaccaagtgtcaacggattcgttgacaccaaatct 9407298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 33005516 - 33005569
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||| |||||||||||||| |||||||| | |||||||||||| ||||||    
T  33005516 aagagtcatgatccgttgacaccaagtgtcaatgaattcgttgacacaaaatct 33005569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 22213028 - 22212972
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||||| |||||| ||  |||||||||||||| ||||||||||||||| ||||||||    
T  22213028 aggatcagttgacgccaggtgtcaacggattcattgacaccaaatctcggccgttta 22212972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 36038698 - 36038745
Alignment:
Q  161 ggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||  || |||||||||||||| |||||||||||||    
T  36038698 ggatccgttgacaccaggtatcaacggattcgttaacaccaaatctca 36038745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 22799813 - 22799763
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||| |||||||||||||  ||||||| | |||||||||||||||||||    
T  22799813 agtcagaatccgttgacaccaggtgtcaatgaattcgttgacaccaaatct 22799763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 33471138 - 33471084
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||| |||||||||  ||||||||| ||||||||||| ||||||||| |||||    
T  33471138 aggatctgttgacaccacgtgtcaacgaattcgttgacaacaaatctcaaccgtt 33471084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 34600886 - 34600824
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    ||||| ||||||| ||||||||  |||| |||| |||||||||||||||||| || |||||||    
T  34600886 agagttaggatcccttgacaccaggtgttaacgaattcgttgacaccaaatcgcaaccgttta 34600824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 43510228 - 43510278
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||| ||||||||||||||||  |||||||| |||||||| |||||||||    
T  43510228 agagttaggatccgttgacaccaggtgtcaacagattcgttaacaccaaat 43510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 235532 - 235483
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||||||   ||| |||||||||||||||| |||||    
T  235532 gagtcaggatccgttgacaccggatgttaacggattcgttgacatcaaat 235483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 237040 - 237089
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||||||   ||| |||||||||||||||| |||||    
T  237040 gagtcaggatccgttgacaccggatgttaacggattcgttgacatcaaat 237089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 33006344 - 33006299
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||| ||||||| | |||||||| ||||||||||||||||||||    
T  33006344 aggatctgttgacatcaagtgtcaatggattcgttgacaccaaatc 33006299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 38057644 - 38057599
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||||   ||||||||||||| ||||||||||||||    
T  38057644 aggatccgttgacactaggtgtcaacggattggttgacaccaaatc 38057599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 3e-17; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 47688535 - 47688473
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  47688535 agagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgttta 47688473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 599351 - 599303
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  599351 aggatccgttgacacctggtgtcaacggattcgttgacaccaaatctca 599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 8247693 - 8247745
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  8247693 agagtcaggatccgttgacacctggtgtcaacggattcgttgacacaaaatct 8247745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 11939491 - 11939443
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11939491 aggatccgttgacacctagtgtcaacggattcgttgacacgaaatctca 11939443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 20774235 - 20774176
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||    
T  20774235 gagtcaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgtt 20774176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 30573765 - 30573706
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||||    
T  30573765 agagtcaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgt 30573706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 47785855 - 47785801
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  47785855 agagtcaggatctgttgacaccaggtgtcaacggattcgttgacaccaaatctca 47785801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 8248575 - 8248524
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  8248575 gagtcaggatccgttgacaccagatgtcaacggattcgttgacaccaaatct 8248524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 8266240 - 8266189
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  8266240 gagtcaggatccgttgacaccagatgtcaacggattcgttgacaccaaatct 8266189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 24374785 - 24374840
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||||||||   |||||||| |||||||||||||||||||||    
T  24374785 aagagtcaggatccgttgacaccagctgtcaacgaattcgttgacaccaaatctca 24374840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 2444369 - 2444419
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  2444369 agagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 2444419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 7841542 - 7841600
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||||||||||||||||| |  |||| |||||||||||||||||||||||||| ||||    
T  7841542 gagtcaggatccgttgacatcaggtgttaacggattcgttgacaccaaatctcatccgt 7841600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 31329772 - 31329722
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  31329772 gagtcaggatccgttgacaccaggtgtcaacggattcgttaacaccaaatc 31329722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 53732437 - 53732491
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||||| ||||    
T  53732437 caggatccgttgacaccaggtgtcaacggattcgttgacactaaatctcaaccgt 53732491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 53772804 - 53772854
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  53772804 agagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 53772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 8265365 - 8265410
Alignment:
Q  161 ggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||    
T  8265365 ggatccgttgacacctggtgtcaacggattcgttgacacaaaatct 8265410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 26147087 - 26147034
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  26147087 gagttaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctca 26147034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 26159671 - 26159626
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||| | |||||||||||||||||||||||||||||    
T  26159671 aggatccgttgacatcaagtgtcaacggattcgttgacaccaaatc 26159626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 16903692 - 16903640
Alignment:
Q  161 ggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||| ||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  16903692 ggattcgttgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgt 16903640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 40495093 - 40495149
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagcc 211  Q
    |||||||||||||||||||||  ||||||||  |||||||||||||||| |||||||    
T  40495093 gagtcaggatccgttgacaccaggtgtcaacaaattcgttgacaccaaacctcagcc 40495149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 53773641 - 53773585
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagcc 211  Q
    |||| |||||||||||||| |  ||||||||||||||||||||||||||||| ||||    
T  53773641 gagttaggatccgttgacatcaggtgtcaacggattcgttgacaccaaatctaagcc 53773585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 24158875 - 24158824
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||| ||||||||  |||||||| ||||||||||||||||||||    
T  24158875 gagtcaggatccattgacaccaggtgtcaacagattcgttgacaccaaatct 24158824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 42882737 - 42882686
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||| ||||||||||||||||   |||||||||||||||||||||||||||    
T  42882737 agagttaggatccgttgacaccagatgtcaacggattcgttgacaccaaatc 42882686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 52871303 - 52871346
Alignment:
Q  162 gatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  52871303 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 52871346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 206
Target Start/End: Original strand, 55976172 - 55976215
Alignment:
Q  163 atccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||  |||||||||||||||||||||||||||||    
T  55976172 atccgttgacaccaggtgtcaacggattcgttgacaccaaatct 55976215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 213
Target Start/End: Original strand, 56262475 - 56262534
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||| |||||||||||||||||  ||||||| | ||||||||||||||||||||| ||||    
T  56262475 agagacaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatctcaaccgt 56262534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 5046005 - 5046043
Alignment:
Q  178 gtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  5046005 gtgtcaacggattcgttgacaccaaatctcaaccgttta 5046043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 9365166 - 9365220
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||| |||||  ||||||||| ||| |||||||||||||||||    
T  9365166 agagtcaggatccgttaacaccaggtgtcaacgaatttgttgacaccaaatctca 9365220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 16903723 - 16903677
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacacca 201  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||    
T  16903723 gagtcaggattcgttgacaccaggtgtcaacggattcgttgacacca 16903677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 53147872 - 53147930
Alignment:
Q  158 tcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    ||||||||| ||||||||   ||||||||||||||||||||||||||| || |||||||    
T  53147872 tcaggatccattgacaccagatgtcaacggattcgttgacaccaaatcccaaccgttta 53147930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 53148666 - 53148608
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||| |||||| |  |||||||| |||||||||||||||||||||| ||||    
T  53148666 gagtcaggatccattgacatcaggtgtcaacagattcgttgacaccaaatctcaaccgt 53148608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 55001488 - 55001434
Alignment:
Q  162 gatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    ||||||||||||||  |||||||||||||||||||||| |||||| | |||||||    
T  55001488 gatccgttgacaccaggtgtcaacggattcgttgacactaaatcttaaccgttta 55001434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 2446216 - 2446163
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  |||||||| |||||||| |||||||||||||    
T  2446216 gagttaggatccgttgacaccaggtgtcaacagattcgttaacaccaaatctca 2446163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 3654565 - 3654520
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||    
T  3654565 aggatccgttgacgccaggtgtcaacggattcgttgacaccaaatc 3654520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 19080387 - 19080432
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||    
T  19080387 caggatctgttgacaccaggtgtcaacggattcgttgacaccaaat 19080432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 47687907 - 47687968
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||| ||||||||||||||||  |||| |||| |||||||||||||||||| || |||||||    
T  47687907 gagttaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatcgcaaccgttta 47687968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 19550289 - 19550333
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||    
T  19550289 aggatcccttgacaccaggtgtcaacggattcgttgacaccaaat 19550333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 1465317 - 1465368
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||| ||||||    
T  1465317 agagtcaggatccgttgacaccaggtgtcaacagattcattgacatcaaatc 1465368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 7841790 - 7841842
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||| ||||||||||||||  | ||||||||| |||||||||||||||||||||    
T  7841790 agagttaggatccgttgaca--tggtgtcaacgaattcgttgacaccaaatctca 7841842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 44792691 - 44792632
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||| ||||||||  ||||||||| ||||||| |||||||||| || |||||    
T  44792691 gagtcaggatccattgacaccaggtgtcaacgaattcgttaacaccaaatcacatccgtt 44792632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 142574 - 142528
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||  ||||||||| |||| ||||||||||||||    
T  142574 aggatccgttgacaccgggtgtcaacgaattcattgacaccaaatct 142528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 5046532 - 5046486
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||  || ||||| ||||||||||||||||||||    
T  5046532 aggatccgttgacaccaggtatcaacagattcgttgacaccaaatct 5046486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 7842581 - 7842531
Alignment:
Q  158 tcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||| |||||| |  ||||||||| |||||||||||||||||||||    
T  7842581 tcaggatccattgacatcaggtgtcaacgaattcgttgacaccaaatctca 7842531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 24551973 - 24551927
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||||||    
T  24551973 aggatccattgacaccaggtgtcaacggatttgttgacaccaaatct 24551927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 43146692 - 43146650
Alignment:
Q  166 cgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||  |||||||||||||| ||||||||||||||||    
T  43146692 cgttgacaccaggtgtcaacggattccttgacaccaaatctca 43146650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 43146692 - 43146730
Alignment:
Q  178 gtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  43146692 gtgtcaacggattcgttgacaccaaatcttaaccgttta 43146730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 55000690 - 55000736
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||    
T  55000690 aggatccattgacaccagatgtcaacggattcgttgacaccaaatct 55000736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 55977005 - 55976959
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||| | ||||||  |||||||||||||||||||||||||||||    
T  55977005 aggatccatcgacaccaggtgtcaacggattcgttgacaccaaatct 55976959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 9365862 - 9365821
Alignment:
Q  164 tccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||  |||||||||||||| |||||||||||||    
T  9365862 tccgttgacaccaggtgtcaacggattcattgacaccaaatc 9365821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 44469491 - 44469540
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||| |||||| |||||||  ||||||||| ||||||||||||||||||    
T  44469491 agtcatgatccgatgacaccaggtgtcaacgaattcgttgacaccaaatc 44469540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 44791720 - 44791781
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||||||||||||| ||| ||||  ||||||||| ||||||| |||||||||| || |||||    
T  44791720 aagagtcaggatccattggcaccaggtgtcaacgaattcgttaacaccaaatcacatccgtt 44791781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 22560623 - 22560564
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||||||||||||||||||| |  ||||||||||||||||||||||||||||||| ||||    
T  22560623 agagtcaggatccgttgacatcaggtgtcaacggattcgttgacaccaaatctcaaccgt 22560564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 1296376 - 1296430
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  1296376 agagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctca 1296430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 1297177 - 1297124
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1297177 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 1297124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 9275584 - 9275637
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  9275584 gagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 9275637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 9276384 - 9276331
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  9276384 gagtcaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatctca 9276331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 29719448 - 29719497
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  29719448 caggatccgttgacaccaggtgtcaacggattcgttgacaccaaatctca 29719497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 33512095 - 33512144
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  33512095 gagtcaggatccgttgacacctagtgtcaacgaattcgttgacactaaat 33512144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 11750254 - 11750314
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    ||||| ||||||| ||||||||  ||||||||||||||||||||||||||||||| |||||    
T  11750254 agagttaggatccattgacaccaggtgtcaacggattcgttgacaccaaatctcaaccgtt 11750314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 6584281 - 6584231
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  6584281 gagtcagaatccattgacaccaagtgtcaacggattcgttgacaccaaatc 6584231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 23857078 - 23857028
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  23857078 gagttaggatccgttgacacctggtgtcaacggattggttgacaccaaatc 23857028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Original strand, 24933833 - 24933887
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| |||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  24933833 agagacaggatccgttgacacctggtgtcaacgaattcattgacaccaaatctca 24933887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 36237628 - 36237678
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  36237628 agagtcaggatccgttgacaccaggtgtcaacggattcattgacaccaaat 36237678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 216
Target Start/End: Complemental strand, 18174724 - 18174663
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||| |||||||||||||| |  ||||||||| ||||||||||||||||||||| |||||||    
T  18174724 gagttaggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatctcaaccgttta 18174663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 19918776 - 19918723
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||| ||  |||||||||||||||||||| |||||||||    
T  19918776 gagtcaggatccgttgacatctgatgtcaacggattcgttgacatcaaatctca 19918723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 29512369 - 29512422
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||    
T  29512369 gagtcatgatccgttgacacctggtgtcaacgaatttgttgacaccaaatctca 29512422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 15774205 - 15774253
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||    
T  15774205 aggatccgttgacacctggtgtcaacgaatttgttgacaccaaatctca 15774253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 26589066 - 26589022
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||    
T  26589066 aggatccgttgacaccaagtgtcaacggattcgttgactccaaat 26589022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 42459046 - 42459102
Alignment:
Q  152 caagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||||| |||||||||    
T  42459046 caagagtcaggatccattgacaccaggtgtcaacagattcgttgacatcaaatctca 42459102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 9540333 - 9540380
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||    
T  9540333 caggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatct 9540380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 18174095 - 18174158
Alignment:
Q  153 aagagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    |||||| ||||||||||||||||  |||| |||| |||||||||||||||||| || |||||||    
T  18174095 aagagttaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatcgcaaccgttta 18174158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 42182670 - 42182611
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    ||||| |||| |||||||||||  ||||||| ||||||||||||||||||||||| ||||    
T  42182670 agagttaggacccgttgacaccaggtgtcaagggattcgttgacaccaaatctcaaccgt 42182611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 8542601 - 8542543
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    ||||||||||| | |||||   ||||||||||||||||||||||||||||||| |||||    
T  8542601 agtcaggatccatggacactaggtgtcaacggattcgttgacaccaaatctcaaccgtt 8542543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 12725669 - 12725619
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||| ||||||||||||||||  ||||||||||||| ||||||||||||||    
T  12725669 gagttaggatccgttgacaccaggtgtcaacggatttgttgacaccaaatc 12725619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 15902931 - 15902885
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||  |||||||||||||||||||||| ||||||    
T  15902931 aggatccgttgacaccaggtgtcaacggattcgttgacacaaaatct 15902885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 22301919 - 22301873
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||    
T  22301919 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatct 22301873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 23856640 - 23856686
Alignment:
Q  162 gatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||    
T  23856640 gatccgttgacacctggtgtcaacggattgattgacaccaaatctca 23856686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 29513196 - 29513150
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||    
T  29513196 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatct 29513150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 29559474 - 29559421
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||| |||||| |||||||||  ||||||||| |||||||||||||||||||||    
T  29559474 gagttaggatctgttgacaccaggtgtcaacgaattcgttgacaccaaatctca 29559421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 23343778 - 23343830
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||| |||||||||   |||||||||||||||||||| |||||||||    
T  23343778 agtcaggatctgttgacaccagatgtcaacggattcgttgacatcaaatctca 23343830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 24755047 - 24754995
Alignment:
Q  156 agtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||  |||||||  |||||||||| |||||||||||    
T  24755047 agtcaggatccgttgacaccaggtgtcaattgattcgttgaaaccaaatctca 24754995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 27177915 - 27177959
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||    
T  27177915 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 27177959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 34812908 - 34812860
Alignment:
Q  157 gtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||||||||   |||||||||||||||| ||||||||||    
T  34812908 gtcaggatccgttgacaccagttgtcaacggattcgttaacaccaaatc 34812860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 11751123 - 11751064
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    |||| ||||||||||||||||  ||||||||| ||||||| |||||||||| || |||||    
T  11751123 gagttaggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatcacatccgtt 11751064  T

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Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 18821286 - 18821235
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||| ||||||||  |||||||||||||  |||||||||||||    
T  18821286 agagtcaggatccattgacaccaggtgtcaacggattaattgacaccaaatc 18821235  T

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Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 16693015 - 16692977
Alignment:
Q  168 ttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  16693015 ttgacaccaggtgtcaacggattcgttgacaccaaatct 16692977  T

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Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 18820430 - 18820480
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||| |||||| |||||| |  ||||||||||||||||||||||||||||    
T  18820430 gagtcgggatccattgacatcaggtgtcaacggattcgttgacaccaaatc 18820480  T

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Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 22301192 - 22301242
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||||||||||  ||||||||| || |||| ||||||||||    
T  22301192 gagtcaggatccgttgacaccaggtgtcaacgaatccgttaacaccaaatc 22301242  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 11007241 - 11007282
Alignment:
Q  167 gttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||  |||||||||||||||||||||| ||||||||    
T  11007241 gttgacaccaggtgtcaacggattcgttgacactaaatctca 11007282  T

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Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 24121344 - 24121291
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||| ||||||||  |||||||| ||||| |||| |||||||||||    
T  24121344 gagtcaggatccattgacaccaggtgtcaacagattcattgagaccaaatctca 24121291  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 26587146 - 26587207
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgttta 216  Q
    ||||||| ||||||||||| |  |||||||  |||||||||||| ||||||||| |||||||    
T  26587146 gagtcagaatccgttgacatcaggtgtcaatagattcgttgacatcaaatctcaaccgttta 26587207  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 26752771 - 26752726
Alignment:
Q  161 ggatccgttgacacctagtgtcaacggattcgttgacaccaaatct 206  Q
    |||||||||||||||  ||||||||| ||||||||||| |||||||    
T  26752771 ggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatct 26752726  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 27178694 - 27178649
Alignment:
Q  160 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||||||||||||  |||||||||||||  |||||||||||||    
T  27178694 aggatccgttgacaccaggtgtcaacggattgtttgacaccaaatc 27178649  T

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Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 38361069 - 38361118
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||| |||||||| |  ||||||||| |||||||||||||||||||||    
T  38361069 caggatacgttgacatcaggtgtcaacgaattcgttgacaccaaatctca 38361118  T

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Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 26589 - 26639
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  26589 gagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 26639  T

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Target: scaffold0002 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 428957 - 428903
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||||  || |||||| |||||||||||||||||||||    
T  428957 agagtcaggatccgttgacacccggtatcaacgaattcgttgacaccaaatctca 428903  T

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Target: scaffold2007 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 748 - 801
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    |||||||||||| ||||||||  || ||||||||||||||||||||||||||||    
T  748 gagtcaggatccattgacaccaggtttcaacggattcgttgacaccaaatctca 801  T

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Target: scaffold0504 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 5434 - 5385
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  5434 gagtcaggatccgttgacaccaggtgtcaacggatttgttgacaccaaat 5385  T

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Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 39893 - 39942
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaat 204  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||||||    
T  39893 gagtcagaatccgttgacaccaggtgtcaacggattcgttgacaccaaat 39942  T

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Target: scaffold0418 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Complemental strand, 6939 - 6883
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagcc 211  Q
    |||||||||||||||||||||  ||||||||  |||||||||||||||| |||||||    
T  6939 gagtcaggatccgttgacaccaggtgtcaacaaattcgttgacaccaaacctcagcc 6883  T

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Target: scaffold0093 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 23784 - 23724
Alignment:
Q  154 agagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgtt 214  Q
    ||||| ||||||| ||||||||   |||||||||||||||||||||||||||||| |||||    
T  23784 agagttaggatccattgacaccagttgtcaacggattcgttgacaccaaatctcaaccgtt 23724  T

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Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 7554 - 7600
Alignment:
Q  161 ggatccgttgacacctagtgtcaacggattcgttgacaccaaatctca 208  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||    
T  7554 ggatccgttgacacctagtgtcaaccga-tcgttgacaccaaatctca 7600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 8346 - 8288
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatctcagccgt 213  Q
    |||| ||||||| ||||||||  ||||||||| ||||||| ||||||||||||| ||||    
T  8346 gagttaggatccattgacaccaggtgtcaacgtattcgttaacaccaaatctcaaccgt 8288  T

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Target: scaffold1213 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 1893 - 1943
Alignment:
Q  155 gagtcaggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    |||||| |||||||||||| |   |||||||||||||||||||||||||||    
T  1893 gagtcaagatccgttgacagcagatgtcaacggattcgttgacaccaaatc 1943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 1588 - 1634
Alignment:
Q  159 caggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 205  Q
    ||||||| |||||||||  ||||||||| ||||||||||||||||||    
T  1588 caggatcggttgacaccaggtgtcaacgaattcgttgacaccaaatc 1634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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