View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7794_low_1 (Length: 732)

Name: NF7794_low_1
Description: NF7794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7794_low_1
NF7794_low_1
[»] chr5 (66 HSPs)
chr5 (129-699)||(38473468-38474038)
chr5 (16-132)||(38474146-38474262)
chr5 (489-666)||(19523976-19524152)
chr5 (513-620)||(15613522-15613629)
chr5 (501-666)||(1273094-1273259)
chr5 (505-620)||(42980701-42980816)
chr5 (501-625)||(19827127-19827251)
chr5 (491-662)||(5975751-5975922)
chr5 (501-619)||(5382947-5383065)
chr5 (505-603)||(15614969-15615067)
chr5 (501-603)||(18677981-18678083)
chr5 (501-669)||(5384289-5384457)
chr5 (505-602)||(27894033-27894130)
chr5 (519-619)||(42979471-42979571)
chr5 (501-612)||(19525288-19525399)
chr5 (491-625)||(224577-224711)
chr5 (501-615)||(1663192-1663306)
chr5 (494-603)||(12933749-12933858)
chr5 (501-625)||(12936089-12936213)
chr5 (505-613)||(15509204-15509312)
chr5 (495-619)||(40058017-40058141)
chr5 (550-625)||(15857605-15857680)
chr5 (513-603)||(7345399-7345489)
chr5 (494-620)||(8762392-8762518)
chr5 (494-603)||(12947910-12948019)
chr5 (505-603)||(18693707-18693805)
chr5 (505-603)||(21387646-21387744)
chr5 (501-666)||(22812332-22812498)
chr5 (501-666)||(12950206-12950371)
chr5 (550-619)||(42510168-42510237)
chr5 (505-613)||(4567973-4568081)
chr5 (222-302)||(38489744-38489824)
chr5 (491-613)||(10085844-10085966)
chr5 (513-568)||(32521703-32521758)
chr5 (505-571)||(5061037-5061103)
chr5 (514-603)||(26403325-26403414)
chr5 (501-603)||(26404219-26404321)
chr5 (505-625)||(18695634-18695754)
chr5 (555-619)||(32734190-32734254)
chr5 (494-569)||(1273383-1273458)
chr5 (565-620)||(10084667-10084722)
chr5 (16-59)||(38490000-38490043)
chr5 (505-607)||(4566960-4567062)
chr5 (505-571)||(5062227-5062293)
chr5 (494-620)||(40059320-40059446)
chr5 (554-619)||(12830931-12830996)
chr5 (554-619)||(12862911-12862976)
chr5 (554-603)||(22819558-22819607)
chr5 (505-571)||(15510304-15510370)
chr5 (565-619)||(22819510-22819564)
chr5 (513-603)||(26912347-26912437)
chr5 (505-571)||(32521963-32522029)
chr5 (546-668)||(32735423-32735545)
chr5 (550-628)||(42511650-42511728)
chr5 (550-603)||(326398-326451)
chr5 (554-603)||(2167523-2167572)
chr5 (514-571)||(22650669-22650726)
chr5 (491-548)||(33362631-33362688)
chr5 (514-619)||(38471307-38471412)
chr5 (505-573)||(20988699-20988767)
chr5 (546-614)||(24761719-24761787)
chr5 (501-540)||(24805296-24805335)
chr5 (505-571)||(15153886-15153952)
chr5 (505-571)||(19050758-19050824)
chr5 (555-625)||(21389130-21389200)
chr5 (491-583)||(223220-223313)
[»] scaffold0003 (2 HSPs)
scaffold0003 (491-699)||(48369-48577)
scaffold0003 (501-619)||(47075-47193)
[»] chr6 (33 HSPs)
chr6 (491-699)||(27438785-27438993)
chr6 (561-699)||(13800096-13800233)
chr6 (513-620)||(22299895-22300002)
chr6 (507-619)||(9927617-9927728)
chr6 (501-603)||(5311284-5311386)
chr6 (501-619)||(27440168-27440286)
chr6 (504-613)||(8412315-8412424)
chr6 (487-598)||(34084148-34084257)
chr6 (489-619)||(293633-293764)
chr6 (513-620)||(8411103-8411210)
chr6 (505-590)||(19368540-19368625)
chr6 (505-619)||(31738372-31738486)
chr6 (501-619)||(33802010-33802128)
chr6 (504-625)||(33807697-33807818)
chr6 (505-573)||(13173046-13173114)
chr6 (505-625)||(31740259-31740379)
chr6 (505-603)||(2138646-2138744)
chr6 (505-603)||(26581962-26582059)
chr6 (554-619)||(14328767-14328832)
chr6 (554-619)||(14421777-14421842)
chr6 (505-570)||(26584079-26584144)
chr6 (513-600)||(34083075-34083163)
chr6 (501-603)||(18139496-18139598)
chr6 (513-571)||(18773671-18773729)
chr6 (505-603)||(22298613-22298711)
chr6 (513-571)||(8447238-8447296)
chr6 (513-571)||(8456042-8456100)
chr6 (505-571)||(28225433-28225499)
chr6 (513-571)||(19367734-19367792)
chr6 (514-568)||(28226462-28226516)
chr6 (504-605)||(13176340-13176441)
chr6 (558-603)||(14326215-14326260)
chr6 (558-603)||(14419225-14419270)
[»] chr1 (76 HSPs)
chr1 (546-699)||(14171181-14171334)
chr1 (515-669)||(26054916-26055070)
chr1 (505-613)||(26056146-26056254)
chr1 (491-625)||(49139796-49139930)
chr1 (501-614)||(3978049-3978162)
chr1 (513-620)||(13641274-13641381)
chr1 (550-628)||(36511315-36511393)
chr1 (504-613)||(3979312-3979421)
chr1 (501-613)||(25787163-25787275)
chr1 (504-620)||(52181297-52181413)
chr1 (501-603)||(13930684-13930786)
chr1 (501-603)||(14071212-14071314)
chr1 (501-603)||(25785973-25786075)
chr1 (504-613)||(47410992-47411101)
chr1 (505-613)||(14390267-14390375)
chr1 (505-625)||(50679808-50679928)
chr1 (501-614)||(48467266-48467378)
chr1 (513-613)||(16217457-16217557)
chr1 (504-600)||(21277002-21277098)
chr1 (494-622)||(52741486-52741614)
chr1 (501-600)||(47411460-47411559)
chr1 (536-625)||(9592278-9592367)
chr1 (486-603)||(34531653-34531770)
chr1 (516-613)||(42248304-42248401)
chr1 (505-573)||(13568484-13568552)
chr1 (505-613)||(20953297-20953405)
chr1 (501-613)||(47136686-47136798)
chr1 (536-619)||(19466198-19466281)
chr1 (501-666)||(13929300-13929465)
chr1 (545-613)||(16218477-16218545)
chr1 (501-628)||(47560144-47560271)
chr1 (505-573)||(51424260-51424328)
chr1 (536-603)||(14169659-14169726)
chr1 (505-571)||(1061337-1061403)
chr1 (505-571)||(33941326-33941392)
chr1 (505-590)||(2236822-2236907)
chr1 (546-607)||(19464650-19464711)
chr1 (550-599)||(51726857-51726906)
chr1 (505-613)||(2237977-2238085)
chr1 (507-571)||(9119813-9119877)
chr1 (505-613)||(35683064-35683172)
chr1 (513-613)||(48935109-48935209)
chr1 (504-571)||(14312783-14312850)
chr1 (505-603)||(13642566-13642664)
chr1 (505-571)||(48974447-48974513)
chr1 (546-607)||(14764279-14764340)
chr1 (550-619)||(36509865-36509934)
chr1 (505-613)||(35684202-35684309)
chr1 (513-577)||(40135372-40135436)
chr1 (505-577)||(47512119-47512191)
chr1 (513-568)||(1873898-1873953)
chr1 (492-571)||(2973049-2973128)
chr1 (505-571)||(1061493-1061559)
chr1 (505-571)||(1898013-1898079)
chr1 (505-567)||(13567175-13567237)
chr1 (505-571)||(34532743-34532809)
chr1 (513-571)||(48934258-48934316)
chr1 (505-569)||(9123442-9123506)
chr1 (491-583)||(9633770-9633862)
chr1 (554-602)||(22167837-22167885)
chr1 (505-577)||(32823467-32823539)
chr1 (484-564)||(33793767-33793847)
chr1 (507-571)||(44340104-44340168)
chr1 (491-619)||(45570314-45570441)
chr1 (514-577)||(32823576-32823639)
chr1 (505-568)||(42244513-42244576)
chr1 (610-688)||(14429868-14429946)
chr1 (609-691)||(19194816-19194898)
chr1 (557-619)||(40811256-40811318)
chr1 (501-619)||(52742969-52743087)
chr1 (513-577)||(2971715-2971780)
chr1 (555-616)||(21278214-21278275)
chr1 (491-571)||(29264867-29264946)
chr1 (504-577)||(39193589-39193662)
chr1 (513-590)||(48973215-48973292)
chr1 (550-623)||(51725397-51725470)
[»] chr8 (66 HSPs)
chr8 (501-694)||(36939951-36940144)
chr8 (514-628)||(37274905-37275019)
chr8 (501-619)||(36756069-36756187)
chr8 (501-612)||(38589826-38589936)
chr8 (505-625)||(24068339-24068459)
chr8 (513-613)||(31625383-31625483)
chr8 (501-603)||(38591016-38591118)
chr8 (501-603)||(37472408-37472510)
chr8 (501-603)||(43275755-43275857)
chr8 (501-597)||(14820198-14820294)
chr8 (501-625)||(29739630-29739754)
chr8 (501-613)||(31623911-31624023)
chr8 (494-613)||(16363811-16363930)
chr8 (505-619)||(35943916-35944031)
chr8 (494-605)||(43277928-43278039)
chr8 (513-619)||(117065-117171)
chr8 (501-603)||(36070183-36070285)
chr8 (554-619)||(20308663-20308728)
chr8 (554-619)||(21095296-21095361)
chr8 (484-613)||(41867915-41868044)
chr8 (505-613)||(45385793-45385901)
chr8 (484-611)||(7796809-7796935)
chr8 (501-607)||(4810129-4810234)
chr8 (513-617)||(6843772-6843878)
chr8 (505-619)||(19913501-19913615)
chr8 (505-603)||(24069455-24069553)
chr8 (550-669)||(34616183-34616307)
chr8 (505-619)||(37994-38108)
chr8 (513-611)||(7816090-7816187)
chr8 (504-666)||(35945383-35945545)
chr8 (513-619)||(37324681-37324787)
chr8 (513-619)||(39546670-39546776)
chr8 (550-619)||(13367043-13367112)
chr8 (505-666)||(19914852-19915013)
chr8 (505-605)||(3237427-3237526)
chr8 (505-605)||(39515208-39515308)
chr8 (550-613)||(1570205-1570268)
chr8 (546-613)||(27750620-27750687)
chr8 (501-596)||(37323353-37323447)
chr8 (505-571)||(6844614-6844680)
chr8 (505-571)||(21267173-21267239)
chr8 (565-619)||(36938750-36938804)
chr8 (494-541)||(8395022-8395069)
chr8 (489-571)||(10052097-10052179)
chr8 (505-612)||(29738300-29738407)
chr8 (501-603)||(37276252-37276354)
chr8 (501-584)||(43386730-43386813)
chr8 (554-619)||(2421286-2421351)
chr8 (550-619)||(7486131-7486200)
chr8 (554-603)||(8095404-8095453)
chr8 (27-96)||(34572980-34573049)
chr8 (503-607)||(41866901-41867005)
chr8 (501-665)||(10053691-10053855)
chr8 (643-691)||(31844518-31844566)
chr8 (494-577)||(4675750-4675833)
chr8 (491-602)||(4807361-4807472)
chr8 (609-691)||(2075488-2075570)
chr8 (513-611)||(7770899-7770996)
chr8 (513-570)||(7815060-7815117)
chr8 (505-571)||(13360362-13360428)
chr8 (505-567)||(29441625-29441687)
chr8 (532-582)||(36757260-36757310)
chr8 (513-619)||(45194500-45194606)
chr8 (505-577)||(3612618-3612690)
chr8 (610-695)||(42793816-42793901)
chr8 (550-659)||(45195757-45195866)
[»] chr4 (85 HSPs)
chr4 (501-620)||(33376223-33376342)
chr4 (501-662)||(31711097-31711258)
chr4 (490-613)||(1273432-1273554)
chr4 (505-619)||(15446663-15446777)
chr4 (505-687)||(46795951-46796133)
chr4 (486-619)||(11114973-11115106)
chr4 (501-613)||(33377363-33377475)
chr4 (494-666)||(21104256-21104428)
chr4 (491-697)||(38553924-38554130)
chr4 (505-687)||(47667188-47667369)
chr4 (501-662)||(28103436-28103597)
chr4 (489-601)||(26393138-26393250)
chr4 (501-604)||(27408768-27408871)
chr4 (504-619)||(35787804-35787919)
chr4 (501-620)||(40146615-40146734)
chr4 (501-619)||(86808-86926)
chr4 (501-619)||(11113747-11113865)
chr4 (505-619)||(38370291-38370405)
chr4 (514-623)||(44304968-44305077)
chr4 (501-621)||(10403408-10403527)
chr4 (501-613)||(37560298-37560410)
chr4 (513-613)||(53400202-53400302)
chr4 (522-613)||(5688636-5688727)
chr4 (550-628)||(34439644-34439722)
chr4 (504-589)||(30682728-30682813)
chr4 (515-603)||(10403298-10403386)
chr4 (505-573)||(15445445-15445513)
chr4 (513-625)||(15787489-15787601)
chr4 (550-613)||(5687229-5687292)
chr4 (514-613)||(26788540-26788639)
chr4 (504-583)||(40143662-40143741)
chr4 (546-668)||(6139047-6139169)
chr4 (505-571)||(26791466-26791531)
chr4 (505-613)||(29833381-29833489)
chr4 (550-602)||(34438460-34438512)
chr4 (501-613)||(37559003-37559115)
chr4 (505-620)||(48206169-48206284)
chr4 (500-603)||(55952830-55952932)
chr4 (513-603)||(3217618-3217708)
chr4 (505-571)||(19049913-19049979)
chr4 (501-603)||(27410692-27410792)
chr4 (481-619)||(39592282-39592420)
chr4 (494-603)||(55953861-55953970)
chr4 (514-619)||(11094544-11094649)
chr4 (505-590)||(30671003-30671088)
chr4 (546-619)||(38419010-38419083)
chr4 (488-619)||(30683020-30683151)
chr4 (535-662)||(307755-307882)
chr4 (554-625)||(38417611-38417682)
chr4 (501-603)||(6616220-6616322)
chr4 (505-571)||(12396915-12396981)
chr4 (501-619)||(15786957-15787075)
chr4 (505-603)||(48207726-48207824)
chr4 (554-668)||(50531700-50531814)
chr4 (530-695)||(3528224-3528389)
chr4 (550-603)||(17319096-17319149)
chr4 (559-619)||(6140353-6140413)
chr4 (505-613)||(44128333-44128441)
chr4 (491-571)||(52881971-52882051)
chr4 (505-625)||(56001255-56001375)
chr4 (488-571)||(28370682-28370765)
chr4 (536-619)||(50530543-50530626)
chr4 (513-603)||(56000304-56000394)
chr4 (505-571)||(23752025-23752091)
chr4 (546-600)||(26121920-26121974)
chr4 (505-619)||(44302729-44302843)
chr4 (505-571)||(53401492-53401558)
chr4 (501-690)||(39590946-39591135)
chr4 (579-652)||(43895577-43895650)
chr4 (505-603)||(44126605-44126705)
chr4 (505-666)||(52658920-52659081)
chr4 (491-571)||(38555317-38555397)
chr4 (545-600)||(29663691-29663746)
chr4 (501-620)||(29686261-29686380)
chr4 (530-605)||(52660221-52660296)
chr4 (513-571)||(52880830-52880889)
chr4 (505-571)||(526760-526826)
chr4 (505-567)||(937143-937205)
chr4 (505-571)||(2310823-2310889)
chr4 (505-571)||(30672105-30672171)
chr4 (505-567)||(44690900-44690962)
chr4 (501-603)||(47668606-47668708)
chr4 (550-603)||(43419384-43419437)
chr4 (554-619)||(44159143-44159208)
chr4 (508-577)||(56297714-56297783)
[»] chr7 (82 HSPs)
chr7 (501-613)||(19278358-19278470)
chr7 (505-620)||(43936132-43936247)
chr7 (546-699)||(27897742-27897896)
chr7 (505-599)||(43935194-43935288)
chr7 (505-599)||(7347233-7347327)
chr7 (501-625)||(13446645-13446769)
chr7 (489-613)||(22060456-22060580)
chr7 (536-620)||(35127850-35127934)
chr7 (514-661)||(24873548-24873695)
chr7 (513-620)||(47163170-47163277)
chr7 (501-599)||(4858357-4858455)
chr7 (505-603)||(19279621-19279719)
chr7 (494-619)||(43930317-43930442)
chr7 (505-605)||(36702786-36702886)
chr7 (505-617)||(41126248-41126360)
chr7 (489-577)||(41516379-41516467)
chr7 (494-599)||(43007662-43007767)
chr7 (515-613)||(48754015-48754113)
chr7 (488-625)||(40926506-40926643)
chr7 (504-613)||(48672774-48672883)
chr7 (501-620)||(22744751-22744870)
chr7 (501-613)||(43006390-43006502)
chr7 (501-603)||(36702959-36703062)
chr7 (545-623)||(14206722-14206800)
chr7 (545-623)||(14215412-14215490)
chr7 (501-599)||(18802402-18802500)
chr7 (491-613)||(22746319-22746441)
chr7 (501-666)||(14107837-14108002)
chr7 (501-666)||(14417794-14417959)
chr7 (488-603)||(25153650-25153765)
chr7 (494-662)||(41514996-41515162)
chr7 (505-613)||(41618498-41618606)
chr7 (501-613)||(46674933-46675045)
chr7 (504-619)||(38406026-38406141)
chr7 (501-619)||(4857206-4857324)
chr7 (505-567)||(13446388-13446450)
chr7 (505-583)||(17288249-17288327)
chr7 (505-579)||(18801224-18801298)
chr7 (505-579)||(19848867-19848941)
chr7 (501-583)||(33459572-33459654)
chr7 (505-603)||(36673845-36673943)
chr7 (505-571)||(38002555-38002621)
chr7 (501-613)||(22061794-22061906)
chr7 (551-619)||(26406180-26406248)
chr7 (505-613)||(30222655-30222763)
chr7 (504-571)||(33341306-33341373)
chr7 (513-605)||(34557414-34557506)
chr7 (513-625)||(45721753-45721865)
chr7 (501-612)||(25154936-25155047)
chr7 (505-571)||(1884249-1884315)
chr7 (501-579)||(1970818-1970896)
chr7 (494-603)||(38408283-38408392)
chr7 (505-571)||(41616633-41616699)
chr7 (550-612)||(46458713-46458775)
chr7 (513-602)||(7148068-7148157)
chr7 (501-666)||(25532151-25532314)
chr7 (545-602)||(45719664-45719721)
chr7 (501-613)||(33458315-33458426)
chr7 (505-605)||(38001513-38001613)
chr7 (561-625)||(43931853-43931917)
chr7 (513-605)||(46457087-46457179)
chr7 (536-603)||(27899223-27899290)
chr7 (492-598)||(48671074-48671179)
chr7 (505-571)||(1885282-1885348)
chr7 (504-662)||(28326340-28326497)
chr7 (505-571)||(30224017-30224083)
chr7 (505-571)||(34558342-34558408)
chr7 (501-577)||(28325078-28325153)
chr7 (554-605)||(10256181-10256232)
chr7 (554-668)||(10257332-10257444)
chr7 (505-568)||(48755592-48755655)
chr7 (513-571)||(2903061-2903119)
chr7 (505-571)||(7345923-7345989)
chr7 (505-571)||(18670544-18670610)
chr7 (505-571)||(21171527-21171593)
chr7 (491-525)||(32894884-32894918)
chr7 (561-603)||(35128200-35128242)
chr7 (505-567)||(35480217-35480278)
chr7 (513-571)||(41127212-41127270)
chr7 (513-623)||(45089489-45089598)
chr7 (546-599)||(35315235-35315288)
chr7 (518-603)||(46673512-46673596)
[»] chr3 (88 HSPs)
chr3 (501-612)||(43101899-43102010)
chr3 (501-613)||(54653965-54654077)
chr3 (494-605)||(51825628-51825739)
chr3 (513-615)||(47808103-47808205)
chr3 (494-666)||(8372562-8372734)
chr3 (505-613)||(11219439-11219547)
chr3 (505-625)||(11220645-11220765)
chr3 (505-613)||(29536723-29536831)
chr3 (505-620)||(47855330-47855445)
chr3 (494-666)||(32980398-32980570)
chr3 (494-625)||(25585820-25585951)
chr3 (488-619)||(26798899-26799030)
chr3 (505-695)||(48252942-48253132)
chr3 (508-620)||(13077943-13078055)
chr3 (505-620)||(7820399-7820514)
chr3 (501-619)||(8371225-8371343)
chr3 (501-607)||(53808323-53808429)
chr3 (501-613)||(42632711-42632823)
chr3 (501-603)||(42633895-42633997)
chr3 (494-603)||(49122011-49122120)
chr3 (513-573)||(39190763-39190823)
chr3 (505-613)||(41386139-41386247)
chr3 (494-613)||(51824124-51824243)
chr3 (505-613)||(53049036-53049144)
chr3 (501-620)||(10987645-10987764)
chr3 (515-662)||(19252952-19253099)
chr3 (550-669)||(43345373-43345492)
chr3 (546-619)||(23559869-23559942)
chr3 (507-592)||(51401371-51401456)
chr3 (505-613)||(32974222-32974330)
chr3 (505-585)||(32979097-32979177)
chr3 (501-613)||(41387432-41387544)
chr3 (513-613)||(47806835-47806934)
chr3 (505-613)||(53047906-53048014)
chr3 (501-669)||(53809436-53809604)
chr3 (530-613)||(2124063-2124146)
chr3 (501-619)||(25583119-25583237)
chr3 (506-613)||(39287480-39287587)
chr3 (505-571)||(7822027-7822093)
chr3 (501-618)||(19622010-19622127)
chr3 (490-571)||(39133011-39133092)
chr3 (494-603)||(43103305-43103414)
chr3 (514-687)||(47766876-47767048)
chr3 (505-590)||(48825821-48825906)
chr3 (513-573)||(48034026-48034086)
chr3 (505-620)||(29537134-29537249)
chr3 (561-668)||(35173212-35173319)
chr3 (494-613)||(36626729-36626848)
chr3 (517-620)||(49334329-49334432)
chr3 (505-571)||(19579229-19579295)
chr3 (505-571)||(32973148-32973214)
chr3 (505-571)||(39288480-39288546)
chr3 (505-567)||(40502260-40502322)
chr3 (505-571)||(48035365-48035431)
chr3 (505-603)||(51400224-51400322)
chr3 (505-571)||(52293564-52293630)
chr3 (501-603)||(54752621-54752723)
chr3 (505-590)||(19579316-19579401)
chr3 (554-611)||(43346448-43346505)
chr3 (505-573)||(7583479-7583547)
chr3 (483-571)||(17350143-17350231)
chr3 (505-573)||(53347038-53347105)
chr3 (505-568)||(33563958-33564021)
chr3 (505-568)||(35633236-35633299)
chr3 (505-571)||(1301041-1301107)
chr3 (505-571)||(5416207-5416273)
chr3 (505-603)||(11482996-11483094)
chr3 (505-571)||(46446378-46446444)
chr3 (505-567)||(52292603-52292665)
chr3 (513-571)||(53342733-53342791)
chr3 (505-567)||(55015662-55015724)
chr3 (505-571)||(55443591-55443657)
chr3 (504-669)||(17345319-17345483)
chr3 (505-573)||(2225063-2225131)
chr3 (513-625)||(19622906-19623018)
chr3 (505-577)||(30431384-30431456)
chr3 (615-695)||(45422082-45422162)
chr3 (554-605)||(21127983-21128034)
chr3 (494-577)||(30838505-30838588)
chr3 (504-599)||(48254902-48254995)
chr3 (516-571)||(52705349-52705404)
chr3 (513-568)||(55442611-55442666)
chr3 (609-691)||(143096-143178)
chr3 (505-563)||(5417097-5417155)
chr3 (513-619)||(35174375-35174481)
chr3 (501-619)||(47765444-47765561)
chr3 (505-555)||(47854519-47854569)
chr3 (554-603)||(12060716-12060765)
[»] chr2 (62 HSPs)
chr2 (505-613)||(12852895-12853003)
chr2 (505-666)||(6706935-6707096)
chr2 (561-699)||(25569834-25569972)
chr2 (501-625)||(23178869-23178993)
chr2 (501-625)||(23590126-23590250)
chr2 (514-620)||(6209057-6209162)
chr2 (501-613)||(42028957-42029069)
chr2 (513-620)||(1624968-1625074)
chr2 (501-619)||(23177678-23177797)
chr2 (501-619)||(23588935-23589054)
chr2 (491-613)||(15650436-15650558)
chr2 (505-585)||(12854131-12854211)
chr2 (555-666)||(40174711-40174821)
chr2 (518-628)||(21012064-21012174)
chr2 (494-625)||(12958415-12958545)
chr2 (501-619)||(7036971-7037089)
chr2 (505-573)||(10477351-10477419)
chr2 (550-619)||(14509263-14509332)
chr2 (494-603)||(34039261-34039370)
chr2 (501-577)||(7038367-7038443)
chr2 (501-625)||(37867761-37867885)
chr2 (505-612)||(37869040-37869147)
chr2 (505-603)||(42027202-42027300)
chr2 (505-620)||(42246600-42246715)
chr2 (505-571)||(3254865-3254931)
chr2 (513-603)||(4829482-4829572)
chr2 (505-567)||(33837800-33837862)
chr2 (501-613)||(2581808-2581920)
chr2 (513-573)||(4630123-4630183)
chr2 (554-614)||(14510507-14510567)
chr2 (515-582)||(2583576-2583643)
chr2 (554-625)||(3533613-3533684)
chr2 (536-603)||(7490204-7490271)
chr2 (505-571)||(5564068-5564134)
chr2 (505-571)||(5565186-5565252)
chr2 (494-619)||(28109862-28109987)
chr2 (491-623)||(10368374-10368506)
chr2 (504-577)||(42368343-42368415)
chr2 (513-613)||(2305557-2305657)
chr2 (513-605)||(4628899-4628991)
chr2 (514-602)||(11386642-11386730)
chr2 (504-571)||(3666309-3666376)
chr2 (505-571)||(3665233-3665299)
chr2 (505-571)||(15268390-15268456)
chr2 (505-603)||(29424621-29424719)
chr2 (513-571)||(33836786-33836844)
chr2 (546-607)||(3532244-3532305)
chr2 (513-593)||(10367256-10367336)
chr2 (513-573)||(3255917-3255977)
chr2 (505-577)||(27264608-27264680)
chr2 (513-577)||(35799529-35799593)
chr2 (505-573)||(41312509-41312577)
chr2 (494-593)||(12959724-12959823)
chr2 (505-568)||(41313311-41313374)
chr2 (501-571)||(41795993-41796063)
chr2 (505-571)||(2306702-2306767)
chr2 (505-571)||(14482132-14482198)
chr2 (505-571)||(17179069-17179135)
chr2 (494-564)||(21010542-21010612)
chr2 (550-620)||(35801037-35801107)
chr2 (505-566)||(14573854-14573915)
chr2 (550-619)||(15850652-15850721)
[»] scaffold0051 (2 HSPs)
scaffold0051 (501-625)||(22133-22256)
scaffold0051 (504-583)||(39930-40009)
[»] scaffold0369 (1 HSPs)
scaffold0369 (494-607)||(12908-13021)
[»] scaffold1974 (1 HSPs)
scaffold1974 (501-619)||(621-739)
[»] scaffold1878 (1 HSPs)
scaffold1878 (501-619)||(535-653)
[»] scaffold0290 (2 HSPs)
scaffold0290 (501-619)||(9471-9589)
scaffold0290 (501-666)||(8384-8549)
[»] scaffold0025 (2 HSPs)
scaffold0025 (501-594)||(56718-56811)
scaffold0025 (501-583)||(54596-54678)
[»] scaffold0178 (2 HSPs)
scaffold0178 (505-620)||(2257-2372)
scaffold0178 (513-619)||(1229-1334)
[»] scaffold2127 (1 HSPs)
scaffold2127 (501-613)||(514-626)
[»] scaffold0177 (1 HSPs)
scaffold0177 (505-613)||(1764-1872)
[»] scaffold0155 (1 HSPs)
scaffold0155 (505-572)||(5178-5245)
[»] scaffold0007 (1 HSPs)
scaffold0007 (501-620)||(145861-145980)
[»] scaffold0098 (1 HSPs)
scaffold0098 (556-666)||(42292-42402)
[»] scaffold0045 (2 HSPs)
scaffold0045 (501-615)||(77178-77292)
scaffold0045 (513-564)||(75762-75813)
[»] scaffold0046 (2 HSPs)
scaffold0046 (505-625)||(24802-24922)
scaffold0046 (501-584)||(23411-23494)
[»] scaffold0024 (1 HSPs)
scaffold0024 (501-669)||(72929-73097)
[»] scaffold0084 (1 HSPs)
scaffold0084 (505-662)||(11715-11872)
[»] scaffold0013 (1 HSPs)
scaffold0013 (501-605)||(96165-96269)
[»] scaffold0038 (2 HSPs)
scaffold0038 (505-571)||(25931-25997)
scaffold0038 (514-568)||(26960-27014)
[»] scaffold1827 (1 HSPs)
scaffold1827 (514-571)||(1100-1156)
[»] scaffold0166 (1 HSPs)
scaffold0166 (546-614)||(4216-4284)
[»] scaffold0002 (1 HSPs)
scaffold0002 (519-571)||(458501-458553)
[»] scaffold0687 (1 HSPs)
scaffold0687 (513-570)||(6606-6663)
[»] scaffold0630 (1 HSPs)
scaffold0630 (505-571)||(2019-2085)
[»] scaffold0064 (1 HSPs)
scaffold0064 (505-571)||(20623-20689)
[»] scaffold0839 (1 HSPs)
scaffold0839 (504-577)||(160-233)


Alignment Details
Target: chr5 (Bit Score: 448; Significance: 0; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 129 - 699
Target Start/End: Complemental strand, 38474038 - 38473468
Alignment:
Q  129 aacaaaagaaagtttactagctatgaaaagcgatgagaaattgttgcgcaagttttttagcattgagtacaagtggcaagtgaggtgtagatcgtagata 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38474038 aacaaaagaaagtttactagctatgaaaagcgatgagaaattgttgcgcaagttttttagcattgagtacaagtggcaagtgaggtgtagatcgtagata 38473939  T
Q  229 gtagaaatatggtgttttagtcccaaatcactagtcaagatatataacataggtggagttattctatatatataacatcacgatgttcttccaagtatat 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38473938 gtagaaatatggtgttttagtcccaaatcactagtcaagatatataacataggtggtgttattctatatatataacatcacgatgttcttccaagtatat 38473839  T
Q  329 acatggagatgtgtctatcactgtctcaatgacatggctccgtttcttattgatgtgcagatgttagtgtgtaaaattagattttgggttgtcacgtcta 428  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||  || |||||||||||||||||||| ||||    
T  38473838 acatggagatgtgtctatcactgtctcaatgacatggctccgttccttattgatatgcagatgttaatgt-aaatattagattttgggttgtcacatcta 38473740  T
Q  429 cacattcgtaaggacggtgatcatgttgttgtgtcggatgacaataattgagtttaataattggtttaatgtatcatttggtctcttaactta-ttttta 527  Q
    ||||||| |||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||  |||| ||| ||||||    
T  38473739 cacattcataagaacggtgatcatgttgttgtgttggatgacactaattgagtttaataattggtttaatatattatttggtcctttaatttacttttta 38473640  T
Q  528 gattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtat 627  Q
    ||||| ||||||||  ||||| | |||||||||| ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  38473639 gatttcattttggtcatctaactgtaaagtgtcttaatttggtcccataaatcttctgtcgtttactattttggtcatttccgttaattttttaatgtat 38473540  T
Q  628 attaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacacttga 699  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  38473539 attaatcttgatatcattttaaccacttgattgcaggtctatagtatctaagagtgaaccatcaacacttga 38473468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 38474262 - 38474146
Alignment:
Q  16 aagtttgttcttccatcagtcatgtaaaatgttgattgcacttgatgaatttgaagttgatgttatcttgattcaacctggcccttgttacaatgttaat 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  38474262 aagtttgttcttccatcagtcatgtaaaatgttgattgcacttgatgaatttgaagttaatgttatcttgattcaacctggctcttgttacaatgttaat 38474163  T
Q  116 aaaatttaaacagaaca 132  Q
    |||||||||||||||||    
T  38474162 aaaatttaaacagaaca 38474146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 489 - 666
Target Start/End: Original strand, 19523976 - 19524152
Alignment:
Q  489 ttggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcg 588  Q
    |||| ||||| |||||||||||| |||||||||||||| | ||| | |||||| |  ||| ||||||||||||||||||||||| |||||| ||||||||    
T  19523976 ttggcttaatatatcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtct-ataaattttctgtcg 19524074  T
Q  589 tttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    ||||| ||||||||||| | ||||  ||||||||||| || |||| |||||||  |||| |||| | |||||||||||    
T  19524075 tttaccattttggtcatgtccgtttgttttttaatgtctaataattttgatattgttttgaccattcgattgcaggtc 19524152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 513 - 620
Target Start/End: Original strand, 15613522 - 15613629
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| ||||| ||||||||  ||||| |||||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||| ||||    
T  15613522 cttaacttatttttggatttcattttggtcttctaactataaagtgtctcaatttggtcccataaatcttcttccgtttactattttggtcctctccgtt 15613621  T
Q  613 aatttttt 620  Q
    ||||||||    
T  15613622 aatttttt 15613629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 1273094 - 1273259
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| ||||| |||||||| | ||| |||||||| || ||| |||||| ||||||||||||||| |||||||||||||  |||||| ||||||    
T  1273094 atcatttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcccataaatcttctgcagtttacaattttg 1273193  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    |||  || ||||| ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  1273194 gtcccctccgttagttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 1273259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 505 - 620
Target Start/End: Complemental strand, 42980816 - 42980701
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    |||| ||| |||| |||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||| |||||||| | ||||| |||||||||     
T  42980816 tttgatcttttaatttatttttagatttcattttggtcctataactataaagtgtctcaatttggtctcatatatcttctgccatttaccattttggtcc 42980717  T
Q  605 tcttcgttaatttttt 620  Q
    | | ||||||||||||    
T  42980716 tttccgttaatttttt 42980701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 501 - 625
Target Start/End: Complemental strand, 19827251 - 19827127
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| |||||||||||||||||| | ||| | |||||| |  |||||||||||||||||||||||||| ||||||||||||  ||||||| ||||||    
T  19827251 atcatttagtctcttaacttatttttggttttcaatttggtcccataattataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttg 19827152  T
Q  601 gtcatcttcgttaattttttaatgt 625  Q
    ||||  | ||||  |||||||||||    
T  19827151 gtcacatccgtttgttttttaatgt 19827127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 491 - 662
Target Start/End: Original strand, 5975751 - 5975922
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||||  |||||||||||  |||||||||||||   ||| |||||||| | ||||||||||||||||||||||||||||||||| |||||    |||    
T  5975751 ggtttaatacatcatttggtcctttaacttattttttattttaattttggtcccctaattataaagtgtctcaatttggtctcataagtcttcctctgtt 5975850  T
Q  591 tactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 662  Q
    ||||||| ||||  |||  |||| ||||||||||| ||    | ||||||| |||||||||| |||||||||    
T  5975851 tactattgtggttctctctgttagttttttaatgtctaaagtttttgatatgattttaaccatttgattgca 5975922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 5382947 - 5383065
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | |||   ||||||   ||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  5382947 atcatttggtcccttaacttatttttggttttctatttggtctcctaattataaagtgtctcaatttggtcccataaatctttggtcgtttactattttg 5383046  T
Q  601 gtcatcttcgttaattttt 619  Q
     || ||| ||||| |||||    
T  5383047 atcctctccgttagttttt 5383065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 505 - 603
Target Start/End: Complemental strand, 15615067 - 15614969
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| |||| ||||||||| ||||| |||||||| | |||| |||||||||||||||||||||  ||||||| ||||| |||||||||||||||||    
T  15615067 tttggtcccttatcttatttttggatttcattttggtccgctaactataaagtgtctcaatttggttccataaattttctgccgtttactattttggtc 15614969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 603
Target Start/End: Original strand, 18677981 - 18678083
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||| | | |||| |||||||||||||||||||||| |||||||||||||||||||||  |||||    
T  18677981 atcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtctcaatttggtcccataaatcttctgtcgtttaccgttttg 18678080  T
Q  601 gtc 603  Q
    |||    
T  18678081 gtc 18678083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 501 - 669
Target Start/End: Complemental strand, 5384457 - 5384289
Alignment:
Q  501 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||  ||||| |||||||| |||||| | |||| | | |||| |||||||||||||||||||||| |||||||||||   |||||||||||||    
T  5384457 atcatttggttccttaatttattttt-gattttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttcgtccgtttactatttt 5384359  T
Q  600 ggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 669  Q
    |||| ||| ||||| ||||||||||| || || | ||||||| |||| ||||| | ||||| || |||||    
T  5384358 ggtcctctccgttagttttttaatgtttaatatttttgatataatttcaaccattcgattgtagatctat 5384289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 505 - 602
Target Start/End: Complemental strand, 27894130 - 27894033
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 602  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  27894130 tttggtcgcttaacttattttttgttttcactttggtcccctaactataaagtgtttcaatttggtctcataaattttccgtcgtttactattttggt 27894033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 519 - 619
Target Start/End: Original strand, 42979471 - 42979571
Alignment:
Q  519 ttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttt 618  Q
    |||||||| ||||| |||||||| |||||| |||||||||| |||||||||||  |||| ||||||| ||||||||||||||||| ||| |||| |||||    
T  42979471 ttatttttggatttcattttggtcctctaactataaagtgtttcaatttggtccaataattcttctgccgtttactattttggtcctctccgttgatttt 42979570  T
Q  619 t 619  Q
    |    
T  42979571 t 42979571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 501 - 612
Target Start/End: Complemental strand, 19525399 - 19525288
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| ||||||||||||| |||||||| ||||| ||||||| ||||||| ||||||    
T  19525399 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctccatttggtcacataagtcttctgccgtttaccattttg 19525300  T
Q  601 gtcatcttcgtt 612  Q
    ||| ||| ||||    
T  19525299 gtcctctccgtt 19525288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 491 - 625
Target Start/End: Complemental strand, 224711 - 224577
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||||  ||||| ||||| |||||||||||||  | ||| |||||||| | |||| |||||||||||||||||||||||||||| |||||   || |    
T  224711 ggtttaatacatcatctggtcccttaacttattttatgttttcattttggtcccctaactataaagtgtctcaatttggtctcataagtcttcctccgat 224612  T
Q  591 tactattttggtcatcttcgttaattttttaatgt 625  Q
    ||||| | | ||||||| ||||| |||||||||||    
T  224611 tactaatgtagtcatctccgttagttttttaatgt 224577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 501 - 615
Target Start/End: Original strand, 1663192 - 1663306
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| ||| |||||||||||||| ||||| | |||| | |  ||| |||||||||||| |||||||||  |||||||||||| ||||||||||||||    
T  1663192 atcatttagtcccttaacttatttttggatttcactttgatccattaactataaagtgtcttaatttggtcctataaatcttctgccgtttactattttg 1663291  T
Q  601 gtcatcttcgttaat 615  Q
    ||| ||| |||||||    
T  1663292 gtcttctccgttaat 1663306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 12933749 - 12933858
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| |||||||| ||| |||||||||||||| | ||| |||||| | | |||| ||||||||||||||||||| |||||||| ||||||| |||||||    
T  12933749 ttaatatatcatttagtcccttaacttatttttggttttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttctgccgtttac 12933848  T
Q  594 tattttggtc 603  Q
     |||| ||||    
T  12933849 catttcggtc 12933858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 625
Target Start/End: Complemental strand, 12936213 - 12936089
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| ||| |||||||||||||| | ||| |||||||| | |||| ||||||||||||||||||||||  |||| |||| ||  |||||| ||||||    
T  12936213 atcatttagtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgctgtttaccattttg 12936114  T
Q  601 gtcatcttcgttaattttttaatgt 625  Q
    ||||| | ||||  |||||||||||    
T  12936113 gtcatttccgtttgttttttaatgt 12936089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 15509204 - 15509312
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  |||||||||||     
T  15509204 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctattttggtcc 15509303  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  15509304 tctccgtta 15509312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 495 - 619
Target Start/End: Original strand, 40058017 - 40058141
Alignment:
Q  495 taatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttact 594  Q
    |||| |||| |||| ||||||||||||||||| | ||| |||||| | |  ||| ||| |||||| |||| |||||||||||| ||||||| |||||||     
T  40058017 taatatatcgtttgatctcttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtctcataactcttctgccgtttacc 40058116  T
Q  595 attttggtcatcttcgttaattttt 619  Q
    ||||||||||||| ||||| |||||    
T  40058117 attttggtcatctccgttagttttt 40058141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 550 - 625
Target Start/End: Complemental strand, 15857680 - 15857605
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 625  Q
    |||||||||| |||||||| || |||||||||| |||||||||| ||||||||||||| ||||| |||||||||||    
T  15857680 tataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctccgttagttttttaatgt 15857605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 513 - 603
Target Start/End: Complemental strand, 7345489 - 7345399
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||||||||||  |||| |||||||| |||||| |||||||||||||||||||||| ||||||| || |||||||  || ||||||||    
T  7345489 cttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataaatattttgtcgttatctcttttggtc 7345399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 494 - 620
Target Start/End: Complemental strand, 8762518 - 8762392
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| |||| ||||||| |||||||||||||||  ||| | |||||| |  | | |||||| ||||||||||||||| ||||||| || ||||||||||    
T  8762518 ttaatatatcgtttggtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtcacataaattttatgtcgtttac 8762419  T
Q  594 tattttggtcatcttcgttaatttttt 620  Q
    |||||| ||| ||| ||||||| ||||    
T  8762418 tattttagtcctctccgttaatatttt 8762392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 12947910 - 12948019
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 592  Q
    ||||| |||||||| ||| |||||||||||||| |||||| |||||| | | |||| ||||||||||||||||||| |||||||| |||| |||||||||    
T  12947910 ttaatatatcatttagtcccttaacttattttt-gattttcattttgatcccctaactataaagtgtctcaatttgatctcataagtcttatgtcgttta 12948008  T
Q  593 ctattttggtc 603  Q
    | |||| ||||    
T  12948009 ccatttcggtc 12948019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 505 - 603
Target Start/End: Original strand, 18693707 - 18693805
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| ||||||||||||||  ||||||||||||| |  ||| |||||| ||||||||| ||||| ||||||||||||||||||  || ||||||||    
T  18693707 tttggtcccttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtc 18693805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 505 - 603
Target Start/End: Original strand, 21387646 - 21387744
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| ||||||||||||||  |||| |||||||| | |||| |||||| ||||||||||||||| ||||||||||||| ||||  || ||||||||    
T  21387646 tttggtcccttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtc 21387744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 22812498 - 22812332
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| ||||||||||||||   ||| ||||| || |  ||| |||||| ||||||| |||| || |||||||||||||  |||||||||||||    
T  22812498 atcatttggtcccttaacttattttttattttcattttagtcccttaactataaaatgtctcactttgatcccataaatcttctgcagtttactattttg 22812399  T
Q  601 gtcatcttcgtta-attttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    |||  || |||||  ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  22812398 gtcccctccgttagtttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 22812332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 501 - 666
Target Start/End: Complemental strand, 12950371 - 12950206
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| ||| |||||||||||| | | ||| |||||||| | |||| ||||||||||||||||||||||  |||| |||| ||  |||||| ||||||    
T  12950371 atcatttagtcccttaacttatttatggttttcattttggtcccctaactataaagtgtctcaatttggtccaataagtcttatgatgtttaccattttg 12950272  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    ||||| | ||||  ||||||||||| || || | || ||||  ||| ||||| |||||||| ||||    
T  12950271 gtcatttccgtttgttttttaatgtttactattttttatattgtttcaaccatttgattgctggtc 12950206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 550 - 619
Target Start/End: Original strand, 42510168 - 42510237
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||| ||||| |||||    
T  42510168 tataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctccgttagttttt 42510237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 613
Target Start/End: Complemental strand, 4568081 - 4567973
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| | ||  ||||||||||||    
T  4568081 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgcctttacctattttggtca 4567982  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  4567981 tctccgtta 4567973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 38489824 - 38489744
Alignment:
Q  222 gtagatagtagaaatatggtgttttagtcccaaatcactagtcaagatatataacataggtggagttattctatatatata 302  Q
    ||||| |||||||||||||||||||||||||| | | ||||| |||||| ||||||||  | |||||||||||||||||||    
T  38489824 gtagagagtagaaatatggtgttttagtcccacaccgctagtaaagatacataacatacatagagttattctatatatata 38489744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 491 - 613
Target Start/End: Complemental strand, 10085966 - 10085844
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctct-aattataaagtgtctcaatttggtctcataaatcttctgtcgt 589  Q
    ||||||||  ||||||||||| ||||||||||||||  |||| | |||||| |||| || | |||||||| ||||||||||| |||||||||||||   |    
T  10085966 ggtttaatacatcatttggtcccttaacttatttttgaatttcactttggt-ctcttaactttaaagtgtttcaatttggtcccataaatcttctgctat 10085868  T
Q  590 ttactattttggtcatcttcgtta 613  Q
    |||||||||||||| ||| |||||    
T  10085867 ttactattttggtcctctccgtta 10085844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 513 - 568
Target Start/End: Original strand, 32521703 - 32521758
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 568  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||||||||    
T  32521703 cttaacttatttttagattttattttggtcccctaactataaagtgtctcaatttg 32521758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 5061037 - 5061103
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||| ||||| |||||||| | ||||| |||||||||||||||||||||    
T  5061037 tttggtcccttaacttatttttggatttcattttggtcccctaatgataaagtgtctcaatttggtc 5061103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 514 - 603
Target Start/End: Original strand, 26403325 - 26403414
Alignment:
Q  514 ttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||||||||| |||||| | |||||| |  ||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
T  26403325 ttaacttattttt-gattttcaatttggtcccttaactataaagtgtctcaatttgatctcataaattttatgtcgtttactattttggtc 26403414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 26404321 - 26404219
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||| || ||||| |||||| |   ||||| |||||| || ||| ||||||||||||||||||| || |||||||||| |||| ||||||||||||    
T  26404321 atcatttgatcccttaatttatttatgatttttaatttggtcctttaactataaagtgtctcaatttgatcccataaatcttatgtcatttactattttg 26404222  T
Q  601 gtc 603  Q
    |||    
T  26404221 gtc 26404219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 505 - 625
Target Start/End: Complemental strand, 18695754 - 18695634
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||| |||||||| | ||| |||||  | |  ||| |||||||||||||||||||||| ||||| |||||   ||||||||| | ||||||    
T  18695754 tttggtcccttaatttatttttggttttcattttattcccttaactataaagtgtctcaatttggtcccataagtcttcatccgtttactaatatggtca 18695655  T
Q  605 tcttcgttaattttttaatgt 625  Q
    ||| ||||| |||||||||||    
T  18695654 tctccgttagttttttaatgt 18695634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 555 - 619
Target Start/End: Original strand, 32734190 - 32734254
Alignment:
Q  555 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||||| | ||||| |||||    
T  32734190 agtgtcttaatttggtcccataactcttctgtcgtttactattttggtcatttccgttagttttt 32734254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 494 - 569
Target Start/End: Complemental strand, 1273458 - 1273383
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttgg 569  Q
    ||||| |||| ||||||| |||||||||||||| | ||| |||||||| |  ||||||||||||||||||||||||    
T  1273458 ttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccttaattataaagtgtctcaatttgg 1273383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 565 - 620
Target Start/End: Original strand, 10084667 - 10084722
Alignment:
Q  565 tttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttttt 620  Q
    |||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||||    
T  10084667 tttggtctcataaatcttttgtcgtttactattttggtcctctccgttaatatttt 10084722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38490043 - 38490000
Alignment:
Q  16 aagtttgttcttccatcagtcatgtaaaatgttgattgcacttg 59  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  38490043 aagtttgttcttccatcagacatgtaaaatgttgattgcacttg 38490000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 607
Target Start/End: Original strand, 4566960 - 4567062
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||| ||||||  ||||| |||||| | | |||| |||||||||||||||||||||| | ||  ||||||||||||  || |||||||||    
T  4566960 tttggtcccttaacatattttcggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtca 4567059  T
Q  605 tct 607  Q
    |||    
T  4567060 tct 4567062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 5062293 - 5062227
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||||  |||| |||||||| | ||||| |||||||||||||||||||||    
T  5062293 tttggtcccttaacttatttttgaatttcattttggtcccctaatgataaagtgtctcaatttggtc 5062227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 494 - 620
Target Start/End: Complemental strand, 40059446 - 40059320
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| ||| |||||||| |||||||||||||| | ||| |||||| | | |||| ||| |||||| | || ||||||  |||| ||||||| ||||||     
T  40059446 ttaatatataatttggtcccttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtccaataactcttctgccgtttat 40059347  T
Q  594 tattttggtcatcttcgttaatttttt 620  Q
     |||||||| |||| ||||||||||||    
T  40059346 cattttggtgatctccgttaatttttt 40059320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 619
Target Start/End: Complemental strand, 12830996 - 12830931
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    ||||||||||||||||||  |||| |||||||  |||||||||||||||| ||| |||||||||||    
T  12830996 aagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaattttt 12830931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 619
Target Start/End: Complemental strand, 12862976 - 12862911
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    ||||||||||||||||||  |||| |||||||  |||||||||||||||| ||| |||||||||||    
T  12862976 aagtgtctcaatttggtcctataactcttctgctgtttactattttggtcctctccgttaattttt 12862911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 603
Target Start/End: Complemental strand, 22819607 - 22819558
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  22819607 aagtgtctcaatttggtcccataactcttctgccgtttactattttggtc 22819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 15510370 - 15510304
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||| | | |||| ||||||||||||||||||||||    
T  15510370 tttggtcccttaacttattttcggatttcattttgatcccctaactataaagtgtctcaatttggtc 15510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 565 - 619
Target Start/End: Complemental strand, 22819564 - 22819510
Alignment:
Q  565 tttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    ||||||| ||||| ||||||| ||||||||||||||||||||| ||||| |||||    
T  22819564 tttggtcccataactcttctgccgtttactattttggtcatctccgttagttttt 22819510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 603
Target Start/End: Complemental strand, 26912437 - 26912347
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||||| | ||| |||||||||  |||||||||||||| || ||||| |||  |||| |||||| |||||||| ||| |||||    
T  26912437 cttaacttattttttgttttcattttggtttcctaattataaagtgacttaatttagtcctataattcttctatcgtttacaattgtggtc 26912347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 32522029 - 32521963
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||||||||| |||||||  ||||| |||||||| | |||| |||| |||||||||||||||||    
T  32522029 tttggtctcttaatttattttcggatttcattttggtcccctaactatagagtgtctcaatttggtc 32521963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 668
Target Start/End: Complemental strand, 32735545 - 32735423
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 645  Q
    ||||||| || ||| | ||||||||| ||||| ||||||| |||||| ||||||||||||||  |||| | ||||||||| || || | || |||| |||    
T  32735545 taattattaaatgttttaatttggtcccataactcttctgccgtttattattttggtcatctctgttagtattttaatgtctaatattttttatataatt 32735446  T
Q  646 ttaaccacttgattgcaggtcta 668  Q
    | |||   |||||||||||||||    
T  32735445 tcaacagtttgattgcaggtcta 32735423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 550 - 628
Target Start/End: Complemental strand, 42511728 - 42511650
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtata 628  Q
    ||||||||||||||||||| |  ||||||||||||| ||||| |||||||||  |||| ||||  |||| |||||||||    
T  42511728 tataaagtgtctcaatttgcttccataaatcttctgccgtttcctattttggctatctccgttggttttctaatgtata 42511650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 603
Target Start/End: Original strand, 326398 - 326451
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||||||||||||  |||||||||||||| |||||  |||||||||    
T  326398 tataaagtgtctcaatttggttgcataaatcttctgttgtttatcattttggtc 326451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 603
Target Start/End: Complemental strand, 2167572 - 2167523
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||| ||||||||||| ||||||||||||| |||||| ||||||||||    
T  2167572 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggtc 2167523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 571
Target Start/End: Complemental strand, 22650726 - 22650669
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  22650726 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 22650669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 491 - 548
Target Start/End: Complemental strand, 33362688 - 33362631
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaa 548  Q
    |||||||| |||||||||||| |||||||||||||| | ||||| |||||| ||||||    
T  33362688 ggtttaatatatcatttggtcccttaacttattttttgtttttaatttggtcctctaa 33362631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 619
Target Start/End: Original strand, 38471307 - 38471412
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    |||||||||||||  |||| |||||||| |  ||| | |||| ||| ||||||||||  ||||||||||||  ||||||||||||||||  |||  ||||    
T  38471307 ttaacttatttttgaatttcattttggtcccttaactttaaattgtttcaatttggttccataaatcttcttccgtttactattttggttctctctgtta 38471406  T
Q  614 attttt 619  Q
    ||||||    
T  38471407 attttt 38471412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 573
Target Start/End: Original strand, 20988699 - 20988767
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| |||||||||||||||||| |||||    
T  20988699 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttagtctc 20988767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 24761787 - 24761719
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 614  Q
    ||||||| ||||||||||||||| |||||||| || |||| ||||||| |||||| || ||| ||||||    
T  24761787 taattattaagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgttaa 24761719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 540
Target Start/End: Original strand, 24805296 - 24805335
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttgg 540  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  24805296 atcatttggtctcttaacttatttttggtttttattttgg 24805335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 15153886 - 15153952
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||||  |||||| |||||| || ||| | |||| |||||||||||||||    
T  15153886 tttggtcccttaacttatttttgaattttaatttggtcctttaactttaaactgtctcaatttggtc 15153952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 19050758 - 19050824
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||| ||||| | |||||| | |||| | |||| |||||||||||||||    
T  19050758 tttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtc 19050824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 555 - 625
Target Start/End: Complemental strand, 21389200 - 21389130
Alignment:
Q  555 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 625  Q
    ||||||||||||||||| ||||| |||||   ||||||||| | ||||| ||| ||||| |||||||||||    
T  21389200 agtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcctctccgttagttttttaatgt 21389130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 491 - 583
Target Start/End: Original strand, 223220 - 223313
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattt-tattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 583  Q
    |||||||| |||| ||| ||| |||||||||||||||| |||  | |||||| | |||| |||||||||| | ||||||||| ||||| |||||    
T  223220 ggtttaatatatcgttttgtcccttaacttatttttagttttccactttggtcccctaactataaagtgtattaatttggtcccataagtcttc 223313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 129; Significance: 2e-66; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 491 - 699
Target Start/End: Complemental strand, 48577 - 48369
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||||  ||||||||||| |||||||||||||| ||||| |||||||| || ||| ||||||||||||||||||| || ||||||| ||||| ||||    
T  48577 ggtttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtt 48478  T
Q  591 tactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatc 690  Q
    |||| |||||||||||| ||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  48477 tactcttttggtcatctccgttaattttttaaaatatattattcttgatataattttaaccacttgattgcaggtctatagtatctaagagtgaaccatc 48378  T
Q  691 aacacttga 699  Q
    |||||||||    
T  48377 aacacttga 48369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 47075 - 47193
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| ||||||||||||||  |||| |||||| | |  ||| | |||| ||||||||||||||| ||||||||||||  ||||||||||||||    
T  47075 atcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttg 47174  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||| ||| |||||||||||    
T  47175 gtcctctccgttaattttt 47193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 2e-66; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 491 - 699
Target Start/End: Original strand, 27438785 - 27438993
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||||  ||||||||||| |||||||||||||| ||||| |||||||| || ||| ||||||||||||||||||| || ||||||| ||||| ||||    
T  27438785 ggtttaatacatcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataaatattctgccgtt 27438884  T
Q  591 tactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatc 690  Q
    |||| |||||||||||| ||||||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  27438885 tactcttttggtcatctccgttaattttttaaaatatattattcttgatataattttaaccacttgattgcaggtctatagtatctaagagtgaaccatc 27438984  T
Q  691 aacacttga 699  Q
    |||||||||    
T  27438985 aacacttga 27438993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 561 - 699
Target Start/End: Original strand, 13800096 - 13800233
Alignment:
Q  561 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattg 660  Q
    ||||||||||| ||||||||||    ||| |||| |||||||  | || |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  13800096 tcaatttggtcccataaatctttctccgtatactgttttggttttttt-gttagttttttaatgtatattattcttgatatcattttaaccacttgattg 13800194  T
Q  661 caggtctatggtaactaagagtgaaccatcaacacttga 699  Q
    ||||||||| |||  ||||||||||||||||||||||||    
T  13800195 caggtctatagtatttaagagtgaaccatcaacacttga 13800233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 513 - 620
Target Start/End: Complemental strand, 22300002 - 22299895
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  22300002 cttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtt 22299903  T
Q  613 aatttttt 620  Q
    | ||||||    
T  22299902 attttttt 22299895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 507 - 619
Target Start/End: Original strand, 9927617 - 9927728
Alignment:
Q  507 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatc 606  Q
    ||||| |||||||||||||| | ||||| |||||| | |||| |||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||    
T  9927617 tggtcccttaacttattttttgtttttagtttggtcccctaactataaagtgtctcaatttggtcccataaa-cttcaatcgtttactattttggtcatc 9927715  T
Q  607 ttcgttaattttt 619  Q
    | |||||||||||    
T  9927716 tccgttaattttt 9927728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 603
Target Start/End: Original strand, 5311284 - 5311386
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | ||| || | |||| ||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  5311284 atcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcctataaatcttatgtcgtttactattttg 5311383  T
Q  601 gtc 603  Q
    |||    
T  5311384 gtc 5311386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 619
Target Start/End: Complemental strand, 27440286 - 27440168
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| ||||||||||||||  |||| |||||| | |  ||| | |||| ||||||||||||||| ||||||||||||  ||||||||||||||    
T  27440286 atcatttggtcccttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataaatcttcttccgtttactattttg 27440187  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||| ||| |||||||||||    
T  27440186 gtcctctccgttaattttt 27440168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 613
Target Start/End: Complemental strand, 8412424 - 8412315
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||| |||||||||||||| | ||| | ||| || | |||| |||||||||||||||||||||| |||||||||| || |||||||||||||||||    
T  8412424 atttggtcccttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttggtc 8412325  T
Q  604 atcttcgtta 613  Q
     ||| |||||    
T  8412324 ctctccgtta 8412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 487 - 598
Target Start/End: Complemental strand, 34084257 - 34084148
Alignment:
Q  487 aattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgt 586  Q
    |||||| |||||  ||||||||||| |||||||||||| | | ||| | |||||| ||  || |||||||||||||||||||||||||||||||||||||    
T  34084257 aattggcttaatacatcatttggtcccttaacttatttctggttttcactttggtcct--aaatataaagtgtctcaatttggtctcataaatcttctgt 34084160  T
Q  587 cgtttactattt 598  Q
    ||||||| ||||    
T  34084159 cgtttaccattt 34084148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 489 - 619
Target Start/End: Complemental strand, 293764 - 293633
Alignment:
Q  489 ttggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtctcataaatcttctgtc 587  Q
    |||| ||||| ||| |||||||||||||| ||||||||   ||||   || | |||| |||||||||||||| ||||||||||||||||| |||||||||    
T  293764 ttggcttaatatattatttggtctcttaatttatttttttgttttcaatttgatctcctaattataaagtgtttcaatttggtctcataagtcttctgtc 293665  T
Q  588 gtttactattttggtcatcttcgttaattttt 619  Q
    |||||| ||||||||| ||| |||| ||||||    
T  293664 gtttaccattttggtcctctccgtttattttt 293633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 513 - 620
Target Start/End: Original strand, 8411103 - 8411210
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| | ||| | ||| || | |||| ||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||| ||||    
T  8411103 cttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcttataaatcttatgccgtttactattttggtcctctccgtt 8411202  T
Q  613 aatttttt 620  Q
    ||| ||||    
T  8411203 aatatttt 8411210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 505 - 590
Target Start/End: Complemental strand, 19368625 - 19368540
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||| |||||||||||||  ||||| |||||||| |||||| |||||||||||||||||||||||| ||  ||||||||||||    
T  19368625 tttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtctcttatgtcttctgtcgtt 19368540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 505 - 619
Target Start/End: Original strand, 31738372 - 31738486
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||| ||||||||||| ||||| |||||||  |||||| |||||||||     
T  31738372 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtttaccattttggtcc 31738471  T
Q  605 tcttcgttaattttt 619  Q
    ||| ||||| |||||    
T  31738472 tctccgttagttttt 31738486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 501 - 619
Target Start/End: Complemental strand, 33802128 - 33802010
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||| |||||| || |||||||||||||| ||||||  | |||    
T  33802128 atcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtcttaatttgatcccataaatcttctgtagtttaccgtattg 33802029  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||| ||| ||||| |||||    
T  33802028 gtcctctccgttagttttt 33802010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 504 - 625
Target Start/End: Original strand, 33807697 - 33807818
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||| || |||||||||||||| | ||| | |||||| |  ||| ||||||||||||||||||| |  ||||||| ||||| |||||||  ||||||||    
T  33807697 atttgatcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaatttgatgccataaattttctgccgtttaccgttttggtc 33807796  T
Q  604 atcttcgttaattttttaatgt 625  Q
     ||| |||||||||||||||||    
T  33807797 ctctccgttaattttttaatgt 33807818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 573
Target Start/End: Original strand, 13173046 - 13173114
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| ||||||||||||||||||||||||    
T  13173046 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtctc 13173114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 625
Target Start/End: Complemental strand, 31740379 - 31740259
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    |||||||  ||||||||||||| | ||| | |||||| |  ||| |||||||||||||||||||||| |||||||||| || ||||||| |||||||||     
T  31740379 tttggtcctttaacttattttttgttttcaatttggtcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtcc 31740280  T
Q  605 tcttcgttaattttttaatgt 625  Q
    | | ||||  |||||||||||    
T  31740279 tatccgtttgttttttaatgt 31740259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 603
Target Start/End: Complemental strand, 2138744 - 2138646
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| ||||| |||||||| |||||||||||||| | |||| |||||||||||||||||| ||| | ||  ||||||||||||  || ||||||||    
T  2138744 tttggtcccttaatttatttttggattttattttggtcccctaactataaagtgtctcaatttagtcccttatgtcttctgtcgttacctcttttggtc 2138646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 603
Target Start/End: Original strand, 26581962 - 26582059
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| |||||||||||||| |||||||||||||| |  ||| ||||||||| |||||||||||| | || ||||| ||||| ||||| ||||||||    
T  26581962 tttggtcccttaacttatttttggattttattttggtcccttaactataaagtgactcaatttggtcccttatatcttttgtcg-ttactcttttggtc 26582059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 619
Target Start/End: Complemental strand, 14328832 - 14328767
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| |||||    
T  14328832 aagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttacttttt 14328767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 619
Target Start/End: Complemental strand, 14421842 - 14421777
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||| ||||||||||||||| |||| |||||||||||||||||||| ||| ||||| |||||    
T  14421842 aagtgtcttaatttggtctcataattcttttgtcgtttactattttggtcctctccgttacttttt 14421777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 505 - 570
Target Start/End: Complemental strand, 26584144 - 26584079
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggt 570  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||    
T  26584144 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggt 26584079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 513 - 600
Target Start/End: Original strand, 34083075 - 34083163
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaa-tttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||||||| ||| | ||||||   ||||||||||| |||||||| |||| |||||||||| ||| ||||||||||||||||    
T  34083075 cttaacttatttttagttttcactttggtctcctaattataaactgtctcaaatttgatctcataaattttcagtcgtttactattttg 34083163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 18139598 - 18139496
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||  | ||| | |||| | |||||| ||||||||||||||| |||||| | || |||||||| |||||| | |||||    
T  18139598 atcatttggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttatatcttctgccgtttattgttttg 18139499  T
Q  601 gtc 603  Q
    |||    
T  18139498 gtc 18139496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 18773671 - 18773729
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||| ||||| |||||||| | ||||||||||| |||||||||||||||    
T  18773671 cttaacttatttttggatttcattttggtcccctaattataaaatgtctcaatttggtc 18773729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 603
Target Start/End: Original strand, 22298613 - 22298711
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||  ||||||||||||| | ||| |||||||| |||||||| |||||||||||| |||| || ||||| | ||||| ||||||  |||||||||    
T  22298613 tttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtc 22298711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 8447238 - 8447296
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  8447238 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 8447296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 8456042 - 8456100
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  8456042 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 8456100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 28225433 - 28225499
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  28225433 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 28225499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 19367734 - 19367792
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  19367734 cttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 19367792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 514 - 568
Target Start/End: Complemental strand, 28226516 - 28226462
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 568  Q
    ||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||    
T  28226516 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttg 28226462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 605
Target Start/End: Complemental strand, 13176441 - 13176340
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||| ||||| | |||||  ||||||||||| || | |||| |||||| ||||||||||||||||  ||  |||| |||||||  || ||||||||    
T  13176441 atttggtcccttaattcattttcggattttattttagtcccctaactataaaatgtctcaatttggtcttttatgtcttttgtcgttacctcttttggtc 13176342  T
Q  604 at 605  Q
    ||    
T  13176341 at 13176340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 14326215 - 14326260
Alignment:
Q  558 gtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||||| ||||| |||||| |||||||||||| |||||    
T  14326215 gtctcaatttggtcccataattcttctatcgtttactattgtggtc 14326260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 14419225 - 14419270
Alignment:
Q  558 gtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||||| ||||| |||||| |||||||||||| |||||    
T  14419225 gtctcaatttggtcccataattcttctatcgtttactattgtggtc 14419270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 4e-43; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 546 - 699
Target Start/End: Complemental strand, 14171334 - 14171181
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 645  Q
    |||||||||| ||| ||||||||||| |||||||| |||||| |||||||||||| |||| | | ||||||||||||||||||||| ||||||||| |||    
T  14171334 taattataaaatgtttcaatttggtcccataaatcatctgtcatttactattttgatcatttcctttaattttttaatgtatattattcttgatattatt 14171235  T
Q  646 ttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacacttga 699  Q
    ||||||||||||||||||||||||  ||  ||||||||||||||| ||||||||    
T  14171234 ttaaccacttgattgcaggtctataatatataagagtgaaccatccacacttga 14171181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 515 - 669
Target Start/End: Original strand, 26054916 - 26055070
Alignment:
Q  515 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 614  Q
    |||||||||||| ||||| |||||||| | |||| |||||||||| ||||||||||  |||||||||||||||||||||||||||||||  ||||||||     
T  26054916 taacttatttttggatttcattttggtcccctaactataaagtgtttcaatttggttccataaatcttctgtcgtttactattttggtctccttcgttag 26055015  T
Q  615 ttttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 669  Q
    |||||||||||  | || |  |||||| |||| ||||| | ||||||||||||||    
T  26055016 ttttttaatgtcaaatatttatgatataatttcaaccattagattgcaggtctat 26055070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 505 - 613
Target Start/End: Complemental strand, 26056254 - 26056146
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| ||||| |||||||| | |||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||     
T  26056254 tttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcc 26056155  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  26056154 tctccgtta 26056146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 491 - 625
Target Start/End: Original strand, 49139796 - 49139930
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||||  ||||||||||| |||||||||||||| | |||  ||||||| |  ||| |||||||||||||||||||||||||||||||||| |  |||    
T  49139796 ggtttaatacatcatttggtcccttaacttatttttggttttcgttttggtcccataactataaagtgtctcaatttggtctcataaatcttccgcagtt 49139895  T
Q  591 tactattttggtcatcttcgttaattttttaatgt 625  Q
    |||||||||||| |||| ||||| |||||||||||    
T  49139896 tactattttggtaatctccgttagttttttaatgt 49139930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 501 - 614
Target Start/End: Original strand, 3978049 - 3978162
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| ||||||||||||||  |||| |||||||| || ||| ||||||||||||||||||| || ||||| ||||||||||||||||||||||    
T  3978049 atcatttggtcccttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataattcttctgtcgtttactattttg 3978148  T
Q  601 gtcatcttcgttaa 614  Q
    ||| ||| ||||||    
T  3978149 gtcctctccgttaa 3978162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 513 - 620
Target Start/End: Original strand, 13641274 - 13641381
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  13641274 cttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggtcatctccgtt 13641373  T
Q  613 aatttttt 620  Q
    | ||||||    
T  13641374 attttttt 13641381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 550 - 628
Target Start/End: Complemental strand, 36511393 - 36511315
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtata 628  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||    
T  36511393 tataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttggtcatctccgttagttttctaatgtata 36511315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 504 - 613
Target Start/End: Complemental strand, 3979421 - 3979312
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  3979421 atttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtc 3979322  T
Q  604 atcttcgtta 613  Q
     ||| |||||    
T  3979321 ctctccgtta 3979312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 501 - 613
Target Start/End: Complemental strand, 25787275 - 25787163
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| ||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  25787275 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtctcataaatcttatgccatttactattttg 25787176  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  25787175 gtcctctccgtta 25787163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 504 - 620
Target Start/End: Complemental strand, 52181413 - 52181297
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||||  |||||||||||||   ||| | |||||| |||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  52181413 atttggtcctttaacttattttttattttcaatttggtcctctaactataaagtgtctcaatttagtctcataaatcttatgttgtttactattttggtc 52181314  T
Q  604 atcttcgttaatttttt 620  Q
    |||| ||||||| ||||    
T  52181313 atctccgttaatatttt 52181297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 13930786 - 13930684
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| |||||| |||||||||||||||||||||| ||||| |||| |||||||||| ||||||    
T  13930786 atcatttggtcccttaacttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttaccattttg 13930687  T
Q  601 gtc 603  Q
    |||    
T  13930686 gtc 13930684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 14071314 - 14071212
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| ||||| |||||||| | ||| | |||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  14071314 atcatttggtcccttaatttatttttggttttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcgtttaccattttg 14071215  T
Q  601 gtc 603  Q
    |||    
T  14071214 gtc 14071212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 501 - 603
Target Start/End: Original strand, 25785973 - 25786075
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  25785973 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgtttattattttg 25786072  T
Q  601 gtc 603  Q
    |||    
T  25786073 gtc 25786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 504 - 613
Target Start/End: Original strand, 47410992 - 47411101
Alignment:
Q  504 atttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 602  Q
    |||||||| ||||| |||||||| |||||| | |||| | | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47410992 atttggtcccttaaattattttt-gattttcaatttgatcccctaactataaagtgtctcaatttggtctcataaatcttatgtcgtttactattttggt 47411090  T
Q  603 catcttcgtta 613  Q
    ||||| |||||    
T  47411091 catctccgtta 47411101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 14390267 - 14390375
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||||||||  |||| |||||||| |||||| |||||| ||||||||||||||  |||||||||||| |||||||| |||||||||     
T  14390267 tttggtcccttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataaatcttctttcgtttaccattttggtcc 14390366  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  14390367 tctccgtta 14390375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 505 - 625
Target Start/End: Complemental strand, 50679928 - 50679808
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||||| |||||||||||| |  ||| |||||||||||||||||||||| ||||| |||||   ||||||||| | |||||     
T  50679928 tttggtcccttaacttatttttagtttttattttggtcccttaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatatggtcc 50679829  T
Q  605 tcttcgttaattttttaatgt 625  Q
    ||| ||||| |||||||||||    
T  50679828 tctccgttagttttttaatgt 50679808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 501 - 614
Target Start/End: Original strand, 48467266 - 48467378
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||||| |||| |||||||||| ||||||||||||| |||||||| ||||  ||||| |||||    
T  48467266 atcatttggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtctcttaaatcttatgtc-attactgttttg 48467364  T
Q  601 gtcatcttcgttaa 614  Q
    ||||||| ||||||    
T  48467365 gtcatctccgttaa 48467378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 513 - 613
Target Start/End: Original strand, 16217457 - 16217557
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| | ||||| |||| |  ||||| ||||||||||||||||||||||  ||||||||| |||| ||||||||||||||||||| ||||    
T  16217457 cttaacttatttttggtttttaatttgatcatctaactataaagtgtctcaatttggtcctataaatcttatgtcatttactattttggtcatctccgtt 16217556  T
Q  613 a 613  Q
    |    
T  16217557 a 16217557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 504 - 600
Target Start/End: Original strand, 21277002 - 21277098
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||| |||||||||||||| | ||| | |||||||  |||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  21277002 atttggtcccttaacttatttttggttttcaatttggttgcctaactataaagtatctcaatttggtcccataaatcttctgccgtttactattttg 21277098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 494 - 622
Target Start/End: Original strand, 52741486 - 52741614
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| |||||||||||| |||||||||||||| | |||||||||||| |||||| ||||||||||||||| ||| || | ||  ||||||||| ||||     
T  52741486 ttaatatatcatttggtcccttaacttatttttcgtttttattttggtcctctaactataaagtgtctcaaattgatcccttatgtcttctgtcatttat 52741585  T
Q  594 tattttggtcatcttcgttaattttttaa 622  Q
    | |||||||| ||| | ||| ||||||||    
T  52741586 tgttttggtcctctccattagttttttaa 52741614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 501 - 600
Target Start/End: Complemental strand, 47411559 - 47411460
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||  | |||   |||||||| |||| |||||||||||||||||||||| |||||||||| || ||||||||||||||    
T  47411559 atcatttggtcccttaacttattttcggttttccatttggttccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttactattttg 47411460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 536 - 625
Target Start/End: Original strand, 9592278 - 9592367
Alignment:
Q  536 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 625  Q
    |||||| | |||| |||||||||| |||||||| || |||||||||| ||||||||||||||||| |||| | |||||||||||||||||    
T  9592278 tttggtcccctaactataaagtgtttcaatttgatcccataaatcttttgtcgtttactattttgatcatttccgttaattttttaatgt 9592367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 486 - 603
Target Start/End: Original strand, 34531653 - 34531770
Alignment:
Q  486 taattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctg 585  Q
    |||||||||||||  ||  ||||||| |||||||||||||  ||||| |||||||| |||||| |||||| ||||||||||||||||| ||  |||||||    
T  34531653 taattggtttaatacatgctttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtctcaatttggtctcttatgtcttctg 34531752  T
Q  586 tcgtttactattttggtc 603  Q
    |||||  || ||||||||    
T  34531753 tcgttatctcttttggtc 34531770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 613
Target Start/End: Complemental strand, 42248401 - 42248304
Alignment:
Q  516 aacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    ||||||||||| ||||| |||||||| |  ||| ||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||| |||||||||    
T  42248401 aacttatttttggatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctcttcgtta 42248304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 573
Target Start/End: Complemental strand, 13568552 - 13568484
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||||||    
T  13568552 tttggtcccttaacttatttttagattttattttgattccctatttataaagtgtttcaatttggtctc 13568484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 20953297 - 20953405
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||  |||||||||  ||| ||||| ||||| |||     
T  20953297 tttggtcccttaacttatttttggatttcattttagttctataactataaagtgtctcaatttggtcctataaatcttaagtcatttaccattttagtcc 20953396  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  20953397 tctccgtta 20953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 613
Target Start/End: Complemental strand, 47136798 - 47136686
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||| ||  ||||||||||||| | ||| | || ||| | |||| ||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  47136798 atcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttg 47136699  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  47136698 gtcctctccgtta 47136686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 536 - 619
Target Start/End: Complemental strand, 19466281 - 19466198
Alignment:
Q  536 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||| || ||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||| ||||| |||||    
T  19466281 tttggtcctttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattgtggttctctccgttagttttt 19466198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 13929300 - 13929465
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| |  ||| |||||||||||||||||||||| | ||||||||||  ||||||  || |||    
T  13929300 atcatttggtcccttaacttatttttggttttcaatttggtcccttaactataaagtgtctcaatttggtcccgtaaatcttcttccgtttatcatcttg 13929399  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    ||| | | |||| |||||||||||| || || | |||||||  |||| |||| | ||| |||||||    
T  13929400 gtcctgtccgtttattttttaatgtctaatatttttgatattgttttgaccattcgatggcaggtc 13929465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 545 - 613
Target Start/End: Complemental strand, 16218545 - 16218477
Alignment:
Q  545 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    |||| |||||||| ||||||||||||| |||||||||| ||||||||| |||||||||||||| |||||    
T  16218545 ctaactataaagtatctcaatttggtcccataaatcttatgtcgtttaatattttggtcatctccgtta 16218477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 628
Target Start/End: Original strand, 47560144 - 47560271
Alignment:
Q  501 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||| |||| ||||||||  |||||| | |||||| | |||| |||||||||| |||||||| ||   ||||| ||||| |||||||| ||||    
T  47560144 atcatttggtcccttaccttattttc-gattttcactttggtcccctaactataaagtgtttcaatttgatcctttaaatattctgccgtttactgtttt 47560242  T
Q  600 ggtcatcttcgttaattttttaatgtata 628  Q
    |||||||| |||||||||||| |||||||    
T  47560243 ggtcatctccgttaattttttgatgtata 47560271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 573
Target Start/End: Original strand, 51424260 - 51424328
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||||||||    
T  51424260 tttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtctc 51424328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 536 - 603
Target Start/End: Original strand, 14169659 - 14169726
Alignment:
Q  536 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||| || ||| |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  14169659 tttggtcctttaactataaaatgtctcaatttggtcccataaatcttttgtcgtttactattttggtc 14169726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 1061337 - 1061403
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||| ||||||||||||||| | | || ||||||||||||||||||||||    
T  1061337 tttggtcgcttaacttattttcagattttattttggtccccaaactataaagtgtctcaatttggtc 1061403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 33941326 - 33941392
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||||  ||||||||||||| || |||||||||| |||||||||||||||    
T  33941326 tttggtcccttaacttatttttgaattttattttggtcctttaattataaaatgtctcaatttggtc 33941392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 505 - 590
Target Start/End: Original strand, 2236822 - 2236907
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||    
T  2236822 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 2236907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 546 - 607
Target Start/End: Original strand, 19464650 - 19464711
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatct 607  Q
    |||||||||||||| ||||||||||  || |||||||||| |||||||||||||||||||||    
T  19464650 taattataaagtgtttcaatttggttccacaaatcttctgccgtttactattttggtcatct 19464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 550 - 599
Target Start/End: Complemental strand, 51726906 - 51726857
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||    
T  51726906 tataaagtgtctcaatttggttccataaatcttctgtcgtttactatttt 51726857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 505 - 613
Target Start/End: Complemental strand, 2238085 - 2237977
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||  ||||| |||||||| |  ||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  2238085 tttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 2237986  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  2237985 tctccgtta 2237977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 507 - 571
Target Start/End: Original strand, 9119813 - 9119877
Alignment:
Q  507 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||| |||||||||||||  ||||||| |||||| |||||| ||||||||||||||||||||||    
T  9119813 tggtcccttaacttattttcggattttaatttggtcctctaactataaagtgtctcaatttggtc 9119877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 35683064 - 35683172
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || ||||||||     
T  35683064 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcc 35683163  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  35683164 tctccgtta 35683172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 513 - 613
Target Start/End: Complemental strand, 48935209 - 48935109
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || |||||||||||| ||||    
T  48935209 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcatctccgtt 48935110  T
Q  613 a 613  Q
    |    
T  48935109 a 48935109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 504 - 571
Target Start/End: Original strand, 14312783 - 14312850
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||| |||||||||||||| ||||||||||||||   |||  ||||||||||||||||||||||    
T  14312783 atttggtcccttaacttatttttggattttattttggtctcctagctataaagtgtctcaatttggtc 14312850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 603
Target Start/End: Complemental strand, 13642664 - 13642566
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||  ||||||||||||| | ||| |||||||| |||||||| |||||||||||| |||| || ||||| | ||||| ||||||  |||||||||    
T  13642664 tttggtcctttaacttatttttggttttcattttggtcctctaattttaaagtgtctcagtttgatcccataactattctgccgtttataattttggtc 13642566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 48974513 - 48974447
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||||| |||| ||||||||||||||| ||||||    
T  48974513 tttggtcccttaacttattttcggatttcattttggttccctaactataaagtgtctcaacttggtc 48974447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 546 - 607
Target Start/End: Original strand, 14764279 - 14764340
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatct 607  Q
    ||||||| |||||| | ||||||||||||||| |||||||||||||||| |||| |||||||    
T  14764279 taattattaagtgtgttaatttggtctcataagtcttctgtcgtttactgttttagtcatct 14764340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 550 - 619
Target Start/End: Original strand, 36509865 - 36509934
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||||| ||||||||||  ||||||||||||| ||||||||||||||||  ||| ||||| |||||    
T  36509865 tataaagtgtttcaatttggttccataaatcttctgccgtttactattttggttctctccgttagttttt 36509934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 613
Target Start/End: Complemental strand, 35684309 - 35684202
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    |||||||  ||||||||||||  |||||||||||||| | |||| |||||| ||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  35684309 tttggtccattaacttattttcggattttattttggtcccctaactataaa-tgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 35684211  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  35684210 tctccgtta 35684202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 577
Target Start/End: Complemental strand, 40135436 - 40135372
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    |||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| ||| |||||    
T  40135436 cttaacttatttttagatttcattttggtcctctaactttaaaatgtctcaattttgtcacataa 40135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 47512191 - 47512119
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    ||||||||||||||||||||||  |||| |||||||| |  ||| | |||| |||||||||||||||||||||    
T  47512191 tttggtctcttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtctcataa 47512119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 513 - 568
Target Start/End: Complemental strand, 1873953 - 1873898
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 568  Q
    ||||||||||||| | ||||||||||||| | |||| |||||||||||||||||||    
T  1873953 cttaacttattttcaaattttattttggtcccctaactataaagtgtctcaatttg 1873898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 492 - 571
Target Start/End: Complemental strand, 2973128 - 2973049
Alignment:
Q  492 gtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||| ||||| || |||||||||||||| | ||| ||||| || |  ||||||||||||||||||||||||||    
T  2973128 gtttaatatattatttgatcccttaacttattttttgttttcattttagtcccttaattataaagtgtctcaatttggtc 2973049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 1061559 - 1061493
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||| ||||||||||||||||| ||||| ||||| || | |||| |||||||||||| |||||||||    
T  1061559 tttgctctcttaacttatttttggatttcattttagtcccctaactataaagtgtcttaatttggtc 1061493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 1898013 - 1898079
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||||  |||||| |||||||| |||| | |||| |||||||||||||||    
T  1898013 tttggtcccttaacttatttttgaattttaatttggttccctaactttaaattgtctcaatttggtc 1898079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 567
Target Start/End: Original strand, 13567175 - 13567237
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 567  Q
    |||||||  ||||||||||||| ||||| |||||  ||| |||||||||||||||||||||||    
T  13567175 tttggtcctttaacttatttttggatttcattttaattccctaattataaagtgtctcaattt 13567237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 34532809 - 34532743
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||  ||||||||||||   ||||||||||||| | |||| ||||||||||||||||||||||    
T  34532809 tttggtcctttaacttattttcgaattttattttggtcccctaactataaagtgtctcaatttggtc 34532743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 48934258 - 48934316
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  48934258 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48934316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 569
Target Start/End: Complemental strand, 9123506 - 9123442
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttgg 569  Q
    ||||||| |||||||||||||  |||||||||||||| |  ||| |||||||||| |||||||||    
T  9123506 tttggtcccttaacttattttcggattttattttggtcccttaactataaagtgtttcaatttgg 9123442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 491 - 583
Target Start/End: Original strand, 9633770 - 9633862
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 583  Q
    ||||||||  || ||||||||  ||||||||||||| | ||| |||||||| |  ||| |||||||||||||||||||||   ||||||||||    
T  9633770 ggtttaatacataatttggtcctttaacttatttttggttttcattttggtcccttaactataaagtgtctcaatttggttatataaatcttc 9633862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 554 - 602
Target Start/End: Original strand, 22167837 - 22167885
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 602  Q
    |||||| ||||||||||| ||||||||||||| |||||| |||||||||    
T  22167837 aagtgtttcaatttggtcccataaatcttctgccgtttattattttggt 22167885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 32823467 - 32823539
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    ||||||| ||||||||||||||  ||||||||||||| |  ||| | |||| ||||||||||||||| |||||    
T  32823467 tttggtcccttaacttatttttgaattttattttggtcccttaactttaaactgtctcaatttggtcccataa 32823539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 33793767 - 33793847
Alignment:
Q  484 aataattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaa 564  Q
    |||| |||| |||||  |||||||| || |||||||||||||| | ||| | |||||| | ||||||||||||||||||||    
T  33793767 aatatttggcttaatacatcatttgatcccttaacttatttttggttttcactttggtcccctaattataaagtgtctcaa 33793847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 571
Target Start/End: Complemental strand, 44340168 - 44340104
Alignment:
Q  507 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||| |||| ||||||||| ||||| |||||| | | ||||||||||||||||||| |||||||    
T  44340168 tggtcccttatcttatttttggatttcattttgatcccctaattataaagtgtctcattttggtc 44340104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 491 - 619
Target Start/End: Original strand, 45570314 - 45570441
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||||| |||||  |||| ||||||||||||| |  ||| | ||||||||  ||| ||| || |||||||| |||||||||||| ||||||| | ||    
T  45570314 ggtttaatgcatcatccggtcccttaacttatttt-atttttcagtttggttccttaactatcaaatgtctcaacttggtctcataactcttctgccatt 45570412  T
Q  591 tactattttggtcatcttcgttaattttt 619  Q
      |||||||||||  ||| ||||||||||    
T  45570413 acctattttggtccactttgttaattttt 45570441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 577
Target Start/End: Complemental strand, 32823639 - 32823576
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    |||||||||||||  ||||||||||||| | |||| | |||| ||||||||||||||| |||||    
T  32823639 ttaacttatttttgaattttattttggtcccctaactttaaactgtctcaatttggtcccataa 32823576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 568
Target Start/End: Original strand, 42244513 - 42244576
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 568  Q
    ||||||| |||||||||||||| ||||| ||||||||  | ||| |||||| ||||||||||||    
T  42244513 tttggtcccttaacttatttttggatttcattttggtcatataactataaaatgtctcaatttg 42244576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 688
Target Start/End: Original strand, 14429868 - 14429946
Alignment:
Q  610 gttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacca 688  Q
    |||| ||||||||||| || || ||||||||| |||||||||  |||||||  |||||||| || |||| |||||||||    
T  14429868 gttatttttttaatgtctaatattcttgatatgattttaaccgtttgattgtgggtctatgatatctaacagtgaacca 14429946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 609 - 691
Target Start/End: Complemental strand, 19194898 - 19194816
Alignment:
Q  609 cgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 691  Q
    |||||||||||||||||||| ||    |||| | |||||||||||||||||||||||  || ||| |||| |||| |||||||    
T  19194898 cgttaattttttaatgtataatatgtatgatgtgattttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 19194816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 557 - 619
Target Start/End: Original strand, 40811256 - 40811318
Alignment:
Q  557 tgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||||||| || ||||| |||| || |||||| |||||||||||||| ||||| |||||    
T  40811256 tgtctcaatttgatcccataactcttttgccgtttattattttggtcatctccgttagttttt 40811318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 501 - 619
Target Start/End: Complemental strand, 52743087 - 52742969
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||| |||||||||   ||| | |||||| | |||| ||||||||||||||| |||||| | ||  | || ||||||||||| || ||    
T  52743087 atcatttggtcccttagcttatttttcattttcactttggtcccctaactataaagtgtctcaaattggtcccttaggttttatgtcgtttactgttatg 52742988  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||| ||| ||||| |||||    
T  52742987 gtcctctccgttagttttt 52742969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 577
Target Start/End: Original strand, 2971715 - 2971780
Alignment:
Q  513 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    ||||||||||||||  ||||| | ||| || |||||| |||||||||||||||||||||| |||||    
T  2971715 cttaacttatttttttattttcactttagtcctctaactataaagtgtctcaatttggtcccataa 2971780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 555 - 616
Target Start/End: Complemental strand, 21278275 - 21278214
Alignment:
Q  555 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatt 616  Q
    ||||| |||| |||||||||||| |||||| || ||||| ||||| ||||||| ||||||||    
T  21278275 agtgtttcaaattggtctcataactcttctatcatttaccattttagtcatctccgttaatt 21278214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 491 - 571
Target Start/End: Original strand, 29264867 - 29264946
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||| |||||||||||| |||||||||||||| |||||| | |||| | |||||| |||||| ||||| |||||||||    
T  29264867 ggtttaatatatcatttggtc-cttaacttattttt-gattttcaatttgatcctctaactataaaatgtcttaatttggtc 29264946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 39193589 - 39193662
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    |||||||| ||||||||||||||  ||||||||||||| |  ||| | |||| |||||||||||| || |||||    
T  39193589 atttggtcccttaacttattttttaattttattttggtcccttaactttaaactgtctcaatttgatcccataa 39193662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 513 - 590
Target Start/End: Original strand, 48973215 - 48973292
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    |||||||||||||  ||||| ||||| || | |||| ||||||||||||||||||| || | ||  ||||||||||||    
T  48973215 cttaacttattttcggatttcattttagtcccctaactataaagtgtctcaatttgatcccttatgtcttctgtcgtt 48973292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 623
Target Start/End: Original strand, 51725397 - 51725470
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaat 623  Q
    ||||||||||||||||||| ||  |||||  ||||| ||||||  ||||||||||| | |||| ||||||||||    
T  51725397 tataaagtgtctcaatttgatcctataaaatttctgccgtttatcattttggtcatgtccgtttattttttaat 51725470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 501 - 694
Target Start/End: Complemental strand, 36940144 - 36939951
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||| | | |||| |||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  36940144 atcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggtatcataaatcttctgccgtttactattttg 36940045  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaaca 694  Q
    ||||||| ||||||||||||||| | || |||| |||||||  ||| ||||| | ||||||||||| || |||  ||| ||||||||| |||||    
T  36940044 gtcatctccgttaattttttaatatctaataattttgatatggtttcaaccattcgattgcaggtccattgtatataatagtgaaccaccaaca 36939951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 514 - 628
Target Start/End: Original strand, 37274905 - 37275019
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    ||||||||||||| ||||| |||||||| |||||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||| ||| |||||    
T  37274905 ttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgtta 37275004  T
Q  614 attttttaatgtata 628  Q
     ||||||||||||||    
T  37275005 gttttttaatgtata 37275019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 36756069 - 36756187
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||||| ||||| |||||| |  ||| |||||||||| ||||| ||||| |||||||||| |||||||||||||||||    
T  36756069 atcatttggtcccttaacttatttttagtttttaatttggtcccataactataaagtgtttcaatctggtcacataaatcttatgtcgtttactattttg 36756168  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||||||| ||||| |||||    
T  36756169 gtcatctccgttagttttt 36756187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 501 - 612
Target Start/End: Original strand, 38589826 - 38589936
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| |||||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  38589826 atcatttggtcccttaacttattttt-gttttcaatttggtcctctaactataaagtggctcaatttggtcccataaatcttatgtcgtttactattttg 38589924  T
Q  601 gtcatcttcgtt 612  Q
     |||||||||||    
T  38589925 atcatcttcgtt 38589936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 505 - 625
Target Start/End: Original strand, 24068339 - 24068459
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||| |||||||     
T  24068339 tttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatttggtcc 24068438  T
Q  605 tcttcgttaattttttaatgt 625  Q
    ||| ||||| |||||||||||    
T  24068439 tctccgttagttttttaatgt 24068459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 513 - 613
Target Start/End: Complemental strand, 31625483 - 31625383
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| | ||| | |||||| | ||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| ||| ||||    
T  31625483 cttaacttatttttggttttcaatttggtcccctaattataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcctctccgtt 31625384  T
Q  613 a 613  Q
    |    
T  31625383 a 31625383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 38591118 - 38591016
Alignment:
Q  501 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||| |||||||||||||| |||||| | |||||| | |||| |||||||||||||||||||||| |||||||||| || |||||||||||||    
T  38591118 atcatttggtcccttaacttattttt-gattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttatgccgtttactatttt 38591020  T
Q  600 ggtc 603  Q
    ||||    
T  38591019 ggtc 38591016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 603
Target Start/End: Original strand, 37472408 - 37472510
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| |||  ||||||||||||| | ||||| |||||| |||||| |||||||||||||||||||||| ||||| |||| |||||||||| ||||||    
T  37472408 atcatttcgtcctttaacttatttttggtttttaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttttgtcgtttaccattttg 37472507  T
Q  601 gtc 603  Q
    |||    
T  37472508 gtc 37472510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 603
Target Start/End: Original strand, 43275755 - 43275857
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||||||||||||||||| | ||| | |||||||| |||| |||||||||||||||||| ||| ||||| |||| || |||||| |||||||    
T  43275755 atcatttggtctcttaacttattttttgttttcaatttggttccctaactataaagtgtctcaatttagtcccataactcttatgccgtttattattttg 43275854  T
Q  601 gtc 603  Q
    |||    
T  43275855 gtc 43275857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 501 - 597
Target Start/End: Original strand, 14820198 - 14820294
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatt 597  Q
    |||| |||||| |||||||||||||| ||||||| |||||| | |||| |||||||||||||||||| ||| |||||||||| ||||||||| ||||    
T  14820198 atcaattggtcccttaacttatttttggattttaatttggtcccctaactataaagtgtctcaatttagtcccataaatcttatgtcgtttattatt 14820294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 501 - 625
Target Start/End: Complemental strand, 29739754 - 29739630
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||||||||| |||||||| | ||| | |||| | | |||| |||||||||||||||||||||| ||||||| ||||  ||||||| ||||||    
T  29739754 atcatttggtctcttaatttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccgtttaccattttg 29739655  T
Q  601 gtcatcttcgttaattttttaatgt 625  Q
    ||||| | ||||  |||||||||||    
T  29739654 gtcatgtccgtttgttttttaatgt 29739630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 501 - 613
Target Start/End: Original strand, 31623911 - 31624023
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||| ||||||||||| |||||||||| ||||||||| ||||||     
T  31623911 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcccataaatcttatgtcgtttattatttta 31624010  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  31624011 gtcctctccgtta 31624023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 613
Target Start/End: Complemental strand, 16363930 - 16363811
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| ||| |||||||| |||||||||||||| | ||| | |||||| |||||| |||||||| |||||||||| || |||||||| ||||  ||||||    
T  16363930 ttaatatataatttggtcccttaacttatttttggttttcactttggtcctctaactataaagtatctcaatttgatcccataaatcgtctgctgtttac 16363831  T
Q  594 tattttggtcatcttcgtta 613  Q
    |||||||||| ||| |||||    
T  16363830 tattttggtcctctccgtta 16363811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 619
Target Start/End: Original strand, 35943916 - 35944031
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaag-tgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| |||||||||||||| | ||| |||||||| |  ||||||||||  ||||||||||||||| |||||||||| ||  ||||||||||||||||    
T  35943916 tttggtcccttaacttatttttggttttcattttggtcccttaattataaaaatgtctcaatttggtcccataaatcttatgcagtttactattttggtc 35944015  T
Q  604 atcttcgttaattttt 619  Q
    |||| ||||| |||||    
T  35944016 atctccgttagttttt 35944031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 605
Target Start/End: Complemental strand, 43278039 - 43277928
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| ||||||||| || ||||||||||||||   ||||| |||||| | |||| |||||| ||||||||||||||| | |||||||| || |||||||    
T  43278039 ttaatatatcatttgatcccttaacttattttttatttttaatttggtcccctaactataaaatgtctcaatttggtcccgtaaatcttatgccgtttac 43277940  T
Q  594 tattttggtcat 605  Q
    ||||||||||||    
T  43277939 tattttggtcat 43277928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 513 - 619
Target Start/End: Original strand, 117065 - 117171
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| | ||| |||||||| | ||||||||||| ||| |||||||| || |||||||||||||||||||| | |||||||| ||| ||||    
T  117065 cttaacttatttttggttttcattttggtcccctaattataaaatgtttcaatttgatcccataaatcttctgtcgtttattgttttggtcctctccgtt 117164  T
Q  613 aattttt 619  Q
    | |||||    
T  117165 agttttt 117171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 501 - 603
Target Start/End: Original strand, 36070183 - 36070285
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||| || ||||| |||||||| | ||| | |||||| | |||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||    
T  36070183 atcatttgatcccttaatttatttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttctgccgtttactattttg 36070282  T
Q  601 gtc 603  Q
    |||    
T  36070283 gtc 36070285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 554 - 619
Target Start/End: Original strand, 20308663 - 20308728
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||    
T  20308663 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaattttt 20308728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 554 - 619
Target Start/End: Original strand, 21095296 - 21095361
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||    
T  21095296 aagtgtctcaatttggtctcataactcttctgtcgtttactattttggtcatttccattaattttt 21095361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 484 - 613
Target Start/End: Complemental strand, 41868044 - 41867915
Alignment:
Q  484 aataattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 583  Q
    ||||||||| |||||  ||||||||||| ||||| |||||||||| ||| | |||||| | |||| |||||||||||||||||||||| ||||||| ||     
T  41868044 aataattggcttaatacatcatttggtcccttaatttatttttagttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatttta 41867945  T
Q  584 tgtcgtttactattttggtcatcttcgtta 613  Q
    || |||||  |||||| ||| ||| |||||    
T  41867944 tgccgttttttattttagtcctctccgtta 41867915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 613
Target Start/End: Complemental strand, 45385901 - 45385793
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| ||||| |||||||| |  |||||||||||||| |||||||| ||  ||||||||| |||||||||| ||||| |||     
T  45385901 tttggtcccttaacttatttttggatttcattttggtcccataattataaagtgtttcaatttgatcctataaatcttatgtcgtttaccattttagtcc 45385802  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  45385801 tctccgtta 45385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 484 - 611
Target Start/End: Complemental strand, 7796935 - 7796809
Alignment:
Q  484 aataattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 583  Q
    |||||| | |||||| |||  ||||||  ||||||||||||||   |||||||||| |  |||||||||||||||||||||||||||||||||| |||||    
T  7796935 aataatagatttaatatatgctttggttccttaacttattttttatttttattttgatcatctaattataaagtgtctcaatttggtctcataactcttc 7796836  T
Q  584 tgtcgtttactattttggtcatcttcgt 611  Q
    || || |||  ||||||||||| |||||    
T  7796835 tgccg-ttatcattttggtcattttcgt 7796809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 501 - 607
Target Start/End: Complemental strand, 4810234 - 4810129
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| ||| |||||||||||||| | ||||| |||||| || |||||||||| |||||||||||  |  |||||||||| |||| ||||||||||||    
T  4810234 atcatttcgtcccttaacttatttttggtttttaatttggtcct-taattataaaatgtctcaatttaattccataaatcttatgtcatttactattttg 4810136  T
Q  601 gtcatct 607  Q
    |||||||    
T  4810135 gtcatct 4810129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 513 - 617
Target Start/End: Original strand, 6843772 - 6843878
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgt-tta-ctattttggtcatcttcg 610  Q
    |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | || |||||||||||| ||| || |||||||||||| |     
T  6843772 cttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccctatatcttctgtcgtgttacctcttttggtcatctcca 6843871  T
Q  611 ttaattt 617  Q
    |||||||    
T  6843872 ttaattt 6843878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 505 - 619
Target Start/End: Original strand, 19913501 - 19913615
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||||||||  |||| | |||||| |||||| |||||||||| ||||||||||| ||||| |||||||  |||||  |||||||||     
T  19913501 tttggtcccttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataagtcttctgcggtttatcattttggtcc 19913600  T
Q  605 tcttcgttaattttt 619  Q
    ||| ||||| |||||    
T  19913601 tctccgttagttttt 19913615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 505 - 603
Target Start/End: Complemental strand, 24069553 - 24069455
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| |||||||||||||| | ||| |||||| | |  ||| |||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  24069553 tttggtcccttaacttatttttggttttcattttgatcccttaactataaagtgtctcaatttggtcccataactcttctgccgtttaccattttggtc 24069455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 550 - 669
Target Start/End: Original strand, 34616183 - 34616307
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttct-----gtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcat 644  Q
    |||||||||||||||||||||| |||||||||| |     ||||||||| ||||||||||| | ||||| ||||||||||| || || | || |||| ||    
T  34616183 tataaagtgtctcaatttggtcccataaatcttttcttttgtcgtttaccattttggtcatttccgttagttttttaatgtttaatatttttaatatgat 34616282  T
Q  645 tttaaccacttgattgcaggtctat 669  Q
    || ||||| | ||||||||||||||    
T  34616283 ttcaaccattcgattgcaggtctat 34616307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 619
Target Start/End: Original strand, 37994 - 38108
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| | ||| ||||| || | |||| |||||||||| | ||||||||||||||| |||||   ||||||||||| |||||     
T  37994 tttggtcccttaacttattttttgttttaattttagtcccctaactataaagtgtttgaatttggtctcataagtcttcctccgtttactattgtggtcc 38093  T
Q  605 tcttcgttaattttt 619  Q
    ||| ||||| |||||    
T  38094 tctccgttagttttt 38108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 611
Target Start/End: Complemental strand, 7816187 - 7816090
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgt 611  Q
    ||||||||||||||   |||||||||| |  ||||| |||||||||||||||||||||||||||| ||||||| || |||  ||||||||||| |||||    
T  7816187 cttaacttattttttatttttattttgatcatctaactataaagtgtctcaatttggtctcataattcttctgccg-ttatcattttggtcattttcgt 7816090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 504 - 666
Target Start/End: Complemental strand, 35945545 - 35945383
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||| |||||||||||||| | ||| ||||| || |  ||| |||||| ||||||| ||||||| |||| ||||||||  ||||||||||||||||    
T  35945545 atttggtcccttaacttattttttgttttcattttagtcccttaactataaaatgtctcactttggtcccatatatcttctgcagtttactattttggtc 35945446  T
Q  604 atcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
      ||   ||| ||||||||||| || || | ||||| | |||| ||||| | |||||||||||    
T  35945445 ccctggattagttttttaatgtttaatatttttgatgtgatttcaaccattcgattgcaggtc 35945383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 619
Target Start/End: Complemental strand, 37324787 - 37324681
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| | ||||| |||||| | |||| |||||| |||||||||||||||||| ||||||||   | |||||||||||| |  ||| ||||    
T  37324787 cttaacttatttttggtttttaatttggtcccctaactataaaatgtctcaatttggtctcaaaaatcttcgaccatttactattttgtttctctccgtt 37324688  T
Q  613 aattttt 619  Q
    |||||||    
T  37324687 aattttt 37324681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 619
Target Start/End: Complemental strand, 39546776 - 39546670
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||  | ||| | |||||||| |||| | |||||||||||||||||||| ||||||| || || |||||||  |||||||||||| ||||    
T  39546776 cttaacttattttctgttttcactttggttccctaactttaaagtgtctcaatttggtcccataaatattatgccgtttaccgttttggtcatctccgtt 39546677  T
Q  613 aattttt 619  Q
    | |||||    
T  39546676 agttttt 39546670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 550 - 619
Target Start/End: Complemental strand, 13367112 - 13367043
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||||| | ||||||||| ||||||||||||| ||||||||||||||||| ||| ||||| |||||    
T  13367112 tataaagtgttttaatttggtcccataaatcttctgccgtttactattttggtcctctccgttagttttt 13367043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 505 - 666
Target Start/End: Complemental strand, 19915013 - 19914852
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    |||||||  ||||||||||||  | ||| | |||||| |  ||| |||||||||||||||||||  | ||||||||||||  ||||||| ||||||||||    
T  19915013 tttggtcctttaacttattttgggttttcaatttggtcccttaactataaagtgtctcaatttgtacccataaatcttctaccgtttaccattttggtca 19914914  T
Q  605 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    | | ||||  ||| ||||||| || || | ||||||| ||| | |||| |||||||||||||    
T  19914913 tatccgtttgtttattaatgtctaatatttttgatattattgtgaccatttgattgcaggtc 19914852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 505 - 605
Target Start/End: Original strand, 3237427 - 3237526
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| ||||| |||| ||| | |||| | |||| ||||||||||||||| ||||||| ||||| ||||||| |||||| |||    
T  3237427 tttggtcccttaacttatttttggatttcattt-ggtcccctaactttaaactgtctcaatttggtcccataaatattctgccgtttacaattttgatca 3237525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 505 - 605
Target Start/End: Original strand, 39515208 - 39515308
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| | ||| |||||| | | || | |||||||||||||||||||||||||||| |||| || | |||||  |||||||||    
T  39515208 tttggtcccttaacttatttttggttttcattttgatcccctgactataaagtgtctcaatttggtctcataactcttttgccatttacctttttggtca 39515307  T
Q  605 t 605  Q
    |    
T  39515308 t 39515308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 550 - 613
Target Start/End: Complemental strand, 1570268 - 1570205
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    |||||||||||||||||||||||  ||||| || || ||||||||||||||||||||| |||||    
T  1570268 tataaagtgtctcaatttggtctattaaattttatgccgtttactattttggtcatctccgtta 1570205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 613
Target Start/End: Complemental strand, 27750687 - 27750620
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    |||||||||||| ||||||||||||| |||||||||| | | |||||||||||||||| ||| |||||    
T  27750687 taattataaagtatctcaatttggtcccataaatcttatattgtttactattttggtcttctccgtta 27750620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 501 - 596
Target Start/End: Original strand, 37323353 - 37323447
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactat 596  Q
    ||||||||||| ||||| |||||||| | ||| | |||||||| |||| |||||| |||||||||||| || ||||||||||| | ||||||||||    
T  37323353 atcatttggtcccttaatttatttttggttttcaatttggttccctaactataaaatgtctcaatttgatcccataaatcttc-ggcgtttactat 37323447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 6844680 - 6844614
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||||| ||||  |||||||||||||||||||||    
T  6844680 tttggtcccttaacttattttcggatttcattttggttccctaacaataaagtgtctcaatttggtc 6844614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 21267173 - 21267239
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||| | ||| | |||||| |||||| ||||||||||||||||||||||    
T  21267173 tttggtcgcttaacttatttttggttttcactttggtcctctaactataaagtgtctcaatttggtc 21267239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 565 - 619
Target Start/End: Original strand, 36938750 - 36938804
Alignment:
Q  565 tttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    ||||||||||||||||||||| ||||||||||||||||| |||  ||||||||||    
T  36938750 tttggtctcataaatcttctgccgtttactattttggtcttctctgttaattttt 36938804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 494 - 541
Target Start/End: Original strand, 8395022 - 8395069
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggt 541  Q
    ||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  8395022 ttaatatatcatttggtctcttaacttatttttggtttttattttggt 8395069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 489 - 571
Target Start/End: Original strand, 10052097 - 10052179
Alignment:
Q  489 ttggtttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||| ||||| |||||||||||| ||||||||||| || |||||| | |||||| | |||||||||||||||||||| ||||||    
T  10052097 ttggcttaatatatcatttggtcccttaacttattctt-gattttcactttggtcccctaattataaagtgtctcaaattggtc 10052179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 505 - 612
Target Start/End: Original strand, 29738300 - 29738407
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||||||||   ||| | ||||||    ||| |||||||||||||||||| ||||||||| ||||||| |||||||  ||||||||     
T  29738300 tttggtcccttaacttattttttattttcaatttggtctattaactataaagtgtctcaatttagtctcataagtcttctgccgtttacctttttggtcc 29738399  T
Q  605 tcttcgtt 612  Q
    ||| ||||    
T  29738400 tctccgtt 29738407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 37276354 - 37276252
Alignment:
Q  501 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||| ||||| |||||||| |||||| | |||| | |  ||| |||||||||||||||||||||| |||||||||| || |||||| ||| ||    
T  37276354 atcatttggtcccttaatttattttt-gattttcactttgatcccttaactataaagtgtctcaatttggtcccataaatcttttgccgtttattatatt 37276256  T
Q  600 ggtc 603  Q
    ||||    
T  37276255 ggtc 37276252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 501 - 584
Target Start/End: Complemental strand, 43386813 - 43386730
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttct 584  Q
    ||||| ||||| |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| ||||| ||||||    
T  43386813 atcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 43386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 619
Target Start/End: Complemental strand, 2421351 - 2421286
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||| ||||||||||| || |||||||||| |||||| |||||||||| |||| |||| |||||    
T  2421351 aagtgtttcaatttggtcccagaaatcttctgccgtttattattttggtcctctttgttagttttt 2421286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 619
Target Start/End: Original strand, 7486131 - 7486200
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||||  ||||||||||| |||||||||| ||  |||||||||||||||| ||| ||||| |||||    
T  7486131 tataaagtgcttcaatttggtcccataaatcttttgctgtttactattttggtcctctccgttagttttt 7486200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 603
Target Start/End: Original strand, 8095404 - 8095453
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||    
T  8095404 aagtgtctcaatttggtcccattactcttttgtcgtttactattttggtc 8095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 34573049 - 34572980
Alignment:
Q  27 tccatcagtcatgtaaaatgttgattgcacttgatgaatttgaagttgatgttatcttgattcaacctgg 96  Q
    |||||||| | |||||||  |||||||||||| ||||| ||||| ||||||| ||||||||| |||||||    
T  34573049 tccatcagacttgtaaaacattgattgcactttatgaaattgaacttgatgtcatcttgattgaacctgg 34572980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 607
Target Start/End: Original strand, 41866901 - 41867005
Alignment:
Q  503 catttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttgg 601  Q
    ||||||||| |||||||||||||| |||||| | |||| | |  ||| |||||||||| ||||||||||| ||||||| ||  | | |||||||||||||    
T  41866901 catttggtcccttaacttattttt-gattttcactttgatcccttaactataaagtgtttcaatttggtcccataaattttacgccatttactattttgg 41866999  T
Q  602 tcatct 607  Q
    ||||||    
T  41867000 tcatct 41867005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 665
Target Start/End: Complemental strand, 10053855 - 10053691
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| ||| |||||||||||||| | ||| | |||||| |  ||| ||||||||||||||| |||||| | ||  |||| |||||||  || |||||    
T  10053855 atcatttagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtcccttatgtcttatgtcgttacctcttttg 10053756  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggt 665  Q
    ||  ||| |||||||||||| |  |||| || | || |||| ||| |||||  ||||||||||||    
T  10053755 gttctctccgttaatttttttaattataatatttttaatatgattataaccgtttgattgcaggt 10053691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 643 - 691
Target Start/End: Original strand, 31844518 - 31844566
Alignment:
Q  643 attttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 691  Q
    |||||||||||||||||||| |||||| |||| ||| ||||||||||||    
T  31844518 attttaaccacttgattgcatgtctattgtaattaacagtgaaccatca 31844566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 577
Target Start/End: Original strand, 4675750 - 4675833
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    ||||| ||| |||||||  ||||||||||||||  ||||||||||||| |  ||| | |||| ||||||||||||||| |||||    
T  4675750 ttaatatatgatttggttccttaacttatttttgaattttattttggtcccttaactttaaattgtctcaatttggtcccataa 4675833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 602
Target Start/End: Original strand, 4807361 - 4807472
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||||  |||||| ||||  |||||||||||||   ||||| |||||| | |||| ||||| || | ||||||||||| ||||||||||  | ||||    
T  4807361 ggtttaatacatcattcggtcctttaacttatttttgatttttaatttggtcccctaactataacgtttttcaatttggtcccataaatcttacgccgtt 4807460  T
Q  591 tactattttggt 602  Q
    || |||||||||    
T  4807461 tattattttggt 4807472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 609 - 691
Target Start/End: Original strand, 2075488 - 2075570
Alignment:
Q  609 cgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 691  Q
    |||||||||||||||||||| ||    |||| | |||||||||||||||||||||||  || ||| |||| |||| |||||||    
T  2075488 cgttaattttttaatgtataatatgtatgatgtgattttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 2075570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 611
Target Start/End: Complemental strand, 7770996 - 7770899
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgt 611  Q
    ||||||||||||||   ||| |||||| |  ||||| |||||||||| ||||||||||||||||| |||| || || |||  ||||||||||| |||||    
T  7770996 cttaacttattttttattttcattttgatcatctaactataaagtgtttcaatttggtctcataactcttatgccg-ttatcattttggtcattttcgt 7770899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 570
Target Start/End: Original strand, 7815060 - 7815117
Alignment:
Q  513 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggt 570  Q
    ||||| |||||||| |||||| |||||||| ||||||||||||| ||||||||||||||    
T  7815060 cttaaattattttt-gattttcattttggtcctctaattataaaatgtctcaatttggt 7815117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 13360362 - 13360428
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||||||||| ||||| || | ||||||| |||  ||||||| ||||||    
T  13360362 tttggtcccttaacttatttttagatttcattttcgtcccctaattaaaaaacgtctcaaattggtc 13360428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 567
Target Start/End: Original strand, 29441625 - 29441687
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 567  Q
    ||||||||||||||||||||||  ||||||||||||| |  ||| | |||| |||||||||||    
T  29441625 tttggtctcttaacttatttttgaattttattttggtcccttaactttaaactgtctcaattt 29441687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 532 - 582
Target Start/End: Complemental strand, 36757310 - 36757260
Alignment:
Q  532 ttattttggttctctaattataaagtgtctcaatttggtctcataaatctt 582  Q
    |||||||||| | |||| ||||||  |||||||||||||||||||||||||    
T  36757310 ttattttggtcccctaactataaaacgtctcaatttggtctcataaatctt 36757260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 619
Target Start/End: Original strand, 45194500 - 45194606
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    ||||| ||||||| |  ||||| |||||| || ||| ||| |||||| | ||||| || | ||||||||| || |||||||||||||| |||||| | ||    
T  45194500 cttaatttattttaattttttagtttggtcctttaactattaagtgttttaatttagtgttataaatcttttgccgtttactattttgatcatctccatt 45194599  T
Q  613 aattttt 619  Q
    |||||||    
T  45194600 aattttt 45194606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 3612690 - 3612618
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggt-tctctaattataaagtgtctcaatttggtctcataa 577  Q
    ||||||| ||||||||||||||  ||||||||||||| ||| ||| | |||| ||||||||||||||| |||||    
T  3612690 tttggtcccttaacttatttttgaattttattttggtctct-taactttaaattgtctcaatttggtcccataa 3612618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 695
Target Start/End: Original strand, 42793816 - 42793901
Alignment:
Q  610 gttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 695  Q
    |||||||||||||||| ||  | | ||||||| |||||||||| | ||||||| ||| || |||| ||| ||||||||||| ||||    
T  42793816 gttaattttttaatgtctaaaacttttgatatgattttaaccattggattgcatgtccattgtaattaatagtgaaccatcgacac 42793901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 659
Target Start/End: Complemental strand, 45195866 - 45195757
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaa 649  Q
    |||||||||||||||||| |||   || |||||||| ||||  ||||||||||||||   ||||||||||| |||| || || | || |||| ||| |||    
T  45195866 tataaagtgtctcaatttagtccattatatcttctgccgttatctattttggtcatcacagttaattttttgatgtttaatatttttaatataattataa 45195767  T
Q  650 ccacttgatt 659  Q
    || |||||||    
T  45195766 ccgcttgatt 45195757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 9e-35; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 501 - 620
Target Start/End: Original strand, 33376223 - 33376342
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||||||||||||||||| | ||| | ||| || | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  33376223 atcatttggtctcttaacttatttttggttttcaatttagtgccctaattataaagtgtctcaatttggtcccataaatcttctgtcgtttactatttta 33376322  T
Q  601 gtcatcttcgttaatttttt 620  Q
    ||| ||| ||||||||||||    
T  33376323 gtcctctccgttaatttttt 33376342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 501 - 662
Target Start/End: Original strand, 31711097 - 31711258
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| ||||| |||||||| || ||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||    
T  31711097 atcatttggtcccttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggtctcataagtcttatgtcgtttaccattttg 31711196  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 662  Q
     || | | ||||  ||||||||||| || || | |||||||  ||| ||||| | |||||||    
T  31711197 atcctttccgtttgttttttaatgtttactatttttgatattgtttcaaccattcgattgca 31711258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 490 - 613
Target Start/End: Complemental strand, 1273554 - 1273432
Alignment:
Q  490 tggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgt 589  Q
    ||||||||| |||||||||||| |||||||||||||| | ||||| |||||| | |||| |||||||||||||||||||||| ||||| |||| ||||||    
T  1273554 tggtttaatatatcatttggtcccttaacttatttttgg-ttttaatttggtcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgt 1273456  T
Q  590 ttactattttggtcatcttcgtta 613  Q
    || ||||||||||| ||| |||||    
T  1273455 ttgctattttggtcctctccgtta 1273432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 505 - 619
Target Start/End: Complemental strand, 15446777 - 15446663
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| ||||| ||||||||  |||||||||||||||| ||||||||||| ||||||| ||||  |||||||||||||||||     
T  15446777 tttggtcccttaacttatttttggatttcattttggtcatctaattataaagtgtttcaatttggtcccataaattttctaccgtttactattttggtcc 15446678  T
Q  605 tcttcgttaattttt 619  Q
    ||| ||||| |||||    
T  15446677 tctccgttagttttt 15446663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 505 - 687
Target Start/End: Complemental strand, 46796133 - 46795951
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||||| |||||     
T  46796133 tttggtcccttaacttatttttggttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactattgtggtcc 46796034  T
Q  605 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacc 687  Q
    ||| ||||| ||||||||||| ||    | ||||||| |||||||||| ||||||||| ||| || |||  ||| ||||||||    
T  46796033 tctccgttagttttttaatgtctaaattttttgatatgattttaaccatttgattgcatgtccattgtatttaatagtgaacc 46795951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 486 - 619
Target Start/End: Complemental strand, 11115106 - 11114973
Alignment:
Q  486 taattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctg 585  Q
    ||||||| |||||  ||||||||||| ||||||||||||| || ||| |||||||| | |||| |||||||| ||||||||||||| ||||| |||||||    
T  11115106 taattggcttaatacatcatttggtcccttaacttattttcagttttcattttggtcccctaactataaagtatctcaatttggtcccataactcttctg 11115007  T
Q  586 tcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||| ||||||| | ||| ||||| |||||    
T  11115006 tcgtttaccattttggacctctccgttagttttt 11114973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 501 - 613
Target Start/End: Complemental strand, 33377475 - 33377363
Alignment:
Q  501 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||| |||||||||||||| |||||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  33377475 atcatttggtcccttaacttattttt-gattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttactatttt 33377377  T
Q  600 ggtcatcttcgtta 613  Q
    |||| ||| |||||    
T  33377376 ggtcctctccgtta 33377363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 494 - 666
Target Start/End: Complemental strand, 21104428 - 21104256
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| |||||||||||  ||||| |||||||| | ||| |||||||| | |||| |||||||||||||||||||||||||||  |||||||||||||||    
T  21104428 ttaatatatcatttggttccttaaattattttttgttttcattttggtcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgtttac 21104329  T
Q  594 tattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
     ||||||||| | | ||||   |||||||||| || || | |||||||  ||| ||||| | |||||||||||    
T  21104328 cattttggtcctttccgtttgctttttaatgtttactatttttgatattgtttcaaccattcgattgcaggtc 21104256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 491 - 697
Target Start/End: Original strand, 38553924 - 38554130
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||||  ||||||||||| ||||| |||||||  | ||||||||||||  ||||| |||||||||||||||||||||||||||| |||||   ||||    
T  38553924 ggtttaatacatcatttggtcccttaatttattttctgtttttattttggtcttctaactataaagtgtctcaatttggtctcataagtcttcctccgtt 38554023  T
Q  591 tactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatc 690  Q
    ||||| | | ||||||| | ||| ||||||||||| ||    | ||||||| |||||||||| ||||| ||| ||| || |||  ||| |||||||| ||    
T  38554024 tactaatgtagtcatctccattagttttttaatgtctaaattttttgatatgattttaaccatttgatcgcacgtccattgtatttaatagtgaaccgtc 38554123  T
Q  691 aacactt 697  Q
    | |||||    
T  38554124 atcactt 38554130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 505 - 687
Target Start/End: Original strand, 47667188 - 47667369
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    |||||||  ||||||||||||| | |||||||||||| |||||| |||||||||||||||||||||||||||| |||||   ||||||||| | |||||     
T  47667188 tttggtcctttaacttatttttggtttttattttggt-ctctaactataaagtgtctcaatttggtctcataagtcttcctccgtttactaatatggtcc 47667286  T
Q  605 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacc 687  Q
    ||| ||||| ||||||||||| ||    | || || | |||||||||| ||||||||| ||| || ||| |||| ||||||||    
T  47667287 tctgcgttagttttttaatgtctaaatttttttatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaacc 47667369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 501 - 662
Target Start/End: Complemental strand, 28103597 - 28103436
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| |||||  |||||| ||||||| ||||||    
T  28103597 atcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataagacttctgccgtttaccattttg 28103498  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 662  Q
    ||| | | ||||  ||||||||||| || || | |||||||  ||| ||||| | |||||||    
T  28103497 gtcctttccgtttgttttttaatgtttactatttttgatattgtttcaaccattcgattgca 28103436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 489 - 601
Target Start/End: Complemental strand, 26393250 - 26393138
Alignment:
Q  489 ttggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcg 588  Q
    ||||||||||  || |||||||| ||||||||||||||   |||||||||| | || ||| |||||||||||||||||||||| ||||| ||||||||||    
T  26393250 ttggtttaatacatgatttggtcccttaacttattttttatttttattttgatcctttaactataaagtgtctcaatttggtcccataactcttctgtcg 26393151  T
Q  589 tttactattttgg 601  Q
    ||||| |||||||    
T  26393150 tttaccattttgg 26393138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 501 - 604
Target Start/End: Original strand, 27408768 - 27408871
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| ||||||||||||| || ||| | ||||||  ||||| |||||||||||||||||||||| ||||||||||||  ||||||| ||||||    
T  27408768 atcatttggtcccttaacttattttcagttttcaatttggtcatctaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttg 27408867  T
Q  601 gtca 604  Q
    ||||    
T  27408868 gtca 27408871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 504 - 619
Target Start/End: Original strand, 35787804 - 35787919
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||| |||||||||||| | ||| | |||||| |||||| |||||| ||| ||||||||||| |||||||||||||||||||||  ||||||||    
T  35787804 atttggtctcataacttatttttggttttcactttggtcctctaactataaaatgtttcaatttggtcccataaatcttctgtcgtttaccgttttggtc 35787903  T
Q  604 atcttcgttaattttt 619  Q
     ||| ||||| |||||    
T  35787904 ctctccgttagttttt 35787919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 501 - 620
Target Start/End: Complemental strand, 40146734 - 40146615
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||| ||||||| | |||||||||||| || ||| |||||||||||||||||||||| ||||| ||||||  || |||||| | ||    
T  40146734 atcatttggtcccttaacgtatttttggtttttattttggtcctttaactataaagtgtctcaatttggtcccataagtcttcttccgattactaatgtg 40146635  T
Q  601 gtcatcttcgttaatttttt 620  Q
    ||||||| ||||| ||||||    
T  40146634 gtcatctccgttagtttttt 40146615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 86808 - 86926
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| ||||||||| |||||||||| ||| | |||||||| |||| |||||||  ||||||||||||| ||||||| ||||| |||||||| |||||    
T  86808 atcatttagtctcttaatttatttttagttttcactttggttccctaactataaagcatctcaatttggtcccataaatattctgccgtttactgttttg 86907  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||| ||| ||||| |||||    
T  86908 gtcttctccgttagttttt 86926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 11113747 - 11113865
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||  | ||| ||||| || |  ||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  11113747 atcatttggtcacttaacttattttcggttttcattttagtcccttaactataaagtgtctcaatttggtctcataactcttctgccgtttaccattttg 11113846  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||||| | ||||| |||||    
T  11113847 gtcatttccgttagttttt 11113865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 505 - 619
Target Start/End: Original strand, 38370291 - 38370405
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||||||||   ||| | ||||||  |||||  ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||    
T  38370291 tttggtcccttaacttatttttcattttcaatttggtcatctaacgataaagtgtatcaatttggtctcataactcttctgtcgtttaccattttggtca 38370390  T
Q  605 tcttcgttaattttt 619  Q
    ||| ||||| |||||    
T  38370391 tctccgttagttttt 38370405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 514 - 623
Target Start/End: Complemental strand, 44305077 - 44304968
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    ||||||||||||| | ||| | |||||| | |||| || |||||||||||||||||||  |||||||||| |  |||||||||||||||||||| |||||    
T  44305077 ttaacttattttttgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttccgctgtttactattttggtcatctccgtta 44304978  T
Q  614 attttttaat 623  Q
    ||||||||||    
T  44304977 attttttaat 44304968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 501 - 621
Target Start/End: Complemental strand, 10403527 - 10403408
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| |||||||||||||||||| | ||| | |||| || ||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||| |    
T  10403527 atcatttagtctcttaacttatttttggttttcactttgatt-tctaactataaagtgtatcaatttggtctcataaatcttcagtcgtttattatttcg 10403429  T
Q  601 gtcatcttcgttaatttttta 621  Q
    ||| |||  |||||| |||||    
T  10403428 gtcctctcggttaatatttta 10403408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 501 - 613
Target Start/End: Complemental strand, 37560410 - 37560298
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||  | |||||||||| |||    
T  37560410 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttacgacgtttactatcttg 37560311  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  37560310 gtcctctccgtta 37560298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 513 - 613
Target Start/End: Original strand, 53400202 - 53400302
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||  ||||||||| |||||||||| ||||| ||| ||| ||||    
T  53400202 cttaacttatttttagatttcattttggtcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctctccgtt 53400301  T
Q  613 a 613  Q
    |    
T  53400302 a 53400302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 522 - 613
Target Start/End: Complemental strand, 5688727 - 5688636
Alignment:
Q  522 tttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    ||||||| ||| | |||||| | |||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| |||||    
T  5688727 tttttagttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttatgtcgtttactattttggtcatctccgtta 5688636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 550 - 628
Target Start/End: Complemental strand, 34439722 - 34439644
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtata 628  Q
    |||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||| |||||||||    
T  34439722 tataaaatgtttcaatttggtcccataaatcttctgccgtttactattttggtcatctccgttagttttctaatgtata 34439644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 589
Target Start/End: Original strand, 30682728 - 30682813
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgt 589  Q
    |||||||| |||||||||||||||| ||| |||||||| |  ||| |||||||||||| |||||||||| ||||||||||||||||    
T  30682728 atttggtcccttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggtcttataaatcttctgtcgt 30682813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 603
Target Start/End: Original strand, 10403298 - 10403386
Alignment:
Q  515 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||| | ||||| |||||| | |||| |||||||||||| ||||||||||| ||||||||  |||||||||||||||||||    
T  10403298 taacttatttttggtttttactttggtcccctaactataaagtgtcttaatttggtctcgtaaatcttacgtcgtttactattttggtc 10403386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 573
Target Start/End: Original strand, 15445445 - 15445513
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    ||||||| |||||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||||    
T  15445445 tttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctcaatttggtctc 15445513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 513 - 625
Target Start/End: Complemental strand, 15787601 - 15787489
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    ||||| |||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| | || || ||||||| ||||||||| ||| | ||    
T  15787601 cttaatttattttttgttttcattttggtcccctaactataaagtgtctcaatttggtcccataacttttttgccgtttaccattttggtcctctccatt 15787502  T
Q  613 aattttttaatgt 625  Q
    |||||||||||||    
T  15787501 aattttttaatgt 15787489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 550 - 613
Target Start/End: Original strand, 5687229 - 5687292
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| |||||    
T  5687229 tataaagtgtctcaatttggtcccataaatcttttgccgtttactattttggtcatctccgtta 5687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 514 - 613
Target Start/End: Original strand, 26788540 - 26788639
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    ||||||||||||||| ||| | |||||| || ||| |||||| | ||||||||| ||| ||||||||||||| ||||||||||||||||| ||| |||||    
T  26788540 ttaacttatttttagttttcactttggtcctataagtataaaatatctcaatttcgtcccataaatcttctgccgtttactattttggtcctctccgtta 26788639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 504 - 583
Target Start/End: Original strand, 40143662 - 40143741
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 583  Q
    ||||||||||||||||||||||||| ||| ||||| || | |||| ||||||||||||||||||| |||||||| |||||    
T  40143662 atttggtctcttaacttatttttagttttcattttagtcccctaactataaagtgtctcaatttgctctcataactcttc 40143741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 546 - 668
Target Start/End: Original strand, 6139047 - 6139169
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 645  Q
    ||||||| || ||||||||||||||||||||| |||| ||| ||||| ||||||||||||||  |||| | ||||||||| || || | || |||| |||    
T  6139047 taattattaaatgtctcaatttggtctcataactcttatgttgtttattattttggtcatctctgttagtattttaatgtctaatattttttatataatt 6139146  T
Q  646 ttaaccacttgattgcaggtcta 668  Q
    | ||||  |||||||||||||||    
T  6139147 tcaaccgtttgattgcaggtcta 6139169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 26791531 - 26791466
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||||||||||| ||||||||||| | || |||||||||||||||||||||||||||    
T  26791531 tttggtctcttaacttatttttggattttattttag-tccctaattataaagtgtctcaatttggtc 26791466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 29833381 - 29833489
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||  ||||| |||||||| | ||||||||||| ||||||||||||||| | || ||||| |||||||  || ||||||||     
T  29833381 tttggtcccttaacttattttcggatttcattttggtcccctaattataaaatgtctcaatttggtcccttatatcttttgtcgttacctcttttggtcc 29833480  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  29833481 tctccgtta 29833489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 550 - 602
Target Start/End: Original strand, 34438460 - 34438512
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 602  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  34438460 tataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggt 34438512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 613
Target Start/End: Original strand, 37559003 - 37559115
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||  |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| |||||| |||    ||||||||||||||    
T  37559003 atcatttggttccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtttactattttg 37559102  T
Q  601 gtcatcttcgtta 613  Q
    ||||||| |||||    
T  37559103 gtcatctccgtta 37559115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 620
Target Start/End: Original strand, 48206169 - 48206284
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    |||| ||| |||| |||||||| | ||||||||||||||  |||||||||||||| |||||||| ||  |||| | ||||  ||||||||||||||||||    
T  48206169 tttgatcttttaatttatttttggtttttattttggttccttaattataaagtgtttcaatttgatcctataacttttctaccgtttactattttggtca 48206268  T
Q  605 tcttcgttaatttttt 620  Q
    | | ||||| ||||||    
T  48206269 tttacgttagtttttt 48206284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 500 - 603
Target Start/End: Original strand, 55952830 - 55952932
Alignment:
Q  500 tatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    |||||||||||| ||||| ||||||||   ||||| ||| || | |||| |||||||||| ||||||||||||||||| |||| ||||||||| ||||||    
T  55952830 tatcatttggtc-cttaatttatttttgatttttaatttagtcccctaactataaagtgtttcaatttggtctcataactcttatgtcgtttattatttt 55952928  T
Q  600 ggtc 603  Q
    ||||    
T  55952929 ggtc 55952932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 603
Target Start/End: Complemental strand, 3217708 - 3217618
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||||||||||  |||| | |||||| || ||| | |||||||| | |||||| ||||||||||||||||| ||||||||||||||||    
T  3217708 cttaacttatttttgaatttcactttggtcctttaactttaaagtgttttaatttgatctcataaatcttctgttgtttactattttggtc 3217618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 19049979 - 19049913
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||| ||||| |||||| | | |||||||||||||||||||||||||||    
T  19049979 tttggtcccttaacttatttttggatttcattttgatcccctaattataaagtgtctcaatttggtc 19049913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 27410792 - 27410692
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||||||||||||| |||||| ||| | |||  | | |||| |||||||||||||||||||||| ||||||||||||  ||||||| ||||||    
T  27410792 atcatttggtctcttaacttaattttagttttcaatttaatcc-ctaactataaagtgtctcaatttggtc-cataaatcttcttccgtttaccattttg 27410695  T
Q  601 gtc 603  Q
    |||    
T  27410694 gtc 27410692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 481 - 619
Target Start/End: Complemental strand, 39592420 - 39592282
Alignment:
Q  481 tttaataattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatc 580  Q
    |||||| || || ||||| |||||||||||| |||||||||||||  | ||| | ||| || | |||| ||||||||||||||| ||||||   ||  ||    
T  39592420 tttaattataggcttaatatatcatttggtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattatgtc 39592321  T
Q  581 ttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||||||||| |||||||  ||| |||||||||||    
T  39592320 ttctgtcgtttactgttttggttctctccgttaattttt 39592282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 55953970 - 55953861
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 592  Q
    ||||| ||||||||| || |||||||||||||| |||||| | |||||| |  ||| |||||| ||||||||||||||| | |||||||| || ||||||    
T  55953970 ttaatatatcatttgatcccttaacttattttt-gattttcaatttggtcccataactataaaatgtctcaatttggtcccgtaaatcttatgccgttta 55953872  T
Q  593 ctattttggtc 603  Q
    |||||||||||    
T  55953871 ctattttggtc 55953861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 514 - 619
Target Start/End: Original strand, 11094544 - 11094649
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    |||| |||||||| | ||||| ||||||   |||| |||||||||||| |||||||||  |||||| ||||| |||||||| |||||||| |||||||||    
T  11094544 ttaatttatttttggtttttactttggtctcctaactataaagtgtcttaatttggtcctataaattttctgccgtttactgttttggtcctcttcgtta 11094643  T
Q  614 attttt 619  Q
     |||||    
T  11094644 gttttt 11094649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 505 - 590
Target Start/End: Original strand, 30671003 - 30671088
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    |||||||||||||||||||||  ||||| |||||||| |  ||| |||||||||||||||||| ||||| || ||||| |||||||    
T  30671003 tttggtctcttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttagtctcttatatcttttgtcgtt 30671088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 546 - 619
Target Start/End: Complemental strand, 38419083 - 38419010
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    ||||||| |||||| ||||||||||||||||| ||||||| |||||||| |||| ||||||| ||||| |||||    
T  38419083 taattattaagtgtgtcaatttggtctcataagtcttctgccgtttactgttttagtcatctccgttagttttt 38419010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 488 - 619
Target Start/End: Complemental strand, 30683151 - 30683020
Alignment:
Q  488 attggtttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgt 586  Q
    |||||||||||  ||  ||||||| ||||| |||||||| |||||| |||||||| |  ||| |||||||||||||||||||||| ||||||||||| |     
T  30683151 attggtttaatacatgctttggtcccttaatttattttt-gattttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttcggc 30683053  T
Q  587 cgtttactattttggtcatcttcgttaattttt 619  Q
    |||| | | |||||||| ||| ||||| |||||    
T  30683052 cgttaattcttttggtcttctccgttagttttt 30683020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 535 - 662
Target Start/End: Complemental strand, 307882 - 307755
Alignment:
Q  535 ttttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatc 634  Q
    |||| ||||||||| ||||||||||||||||||| || ||||| |||||   | ||||||||| ||||||||| ||||  ||||||||||| ||    |     
T  307882 tttttgttctctaactataaagtgtctcaatttgatcccataagtcttcctccatttactattgtggtcatctccgttggttttttaatgtttaaatttt 307783  T
Q  635 ttgatatcattttaaccacttgattgca 662  Q
    ||||||| ||||||||||  ||||||||    
T  307782 ttgatatgattttaaccatatgattgca 307755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 554 - 625
Target Start/End: Original strand, 38417611 - 38417682
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 625  Q
    |||||| ||||||||||| |||||||||| ||||||||||||||| |||| ||| ||||| | |||||||||    
T  38417611 aagtgtgtcaatttggtcccataaatcttatgtcgtttactatttcggtcctctccgttagtattttaatgt 38417682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 6616322 - 6616220
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||  | ||| | |||||| | |||| ||||||||||||||| |||||| | || || |||||||||||| | |||||    
T  6616322 atcatttggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgtcgtttattgttttg 6616223  T
Q  601 gtc 603  Q
    |||    
T  6616222 gtc 6616220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 12396981 - 12396915
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  12396981 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 12396915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 15786957 - 15787075
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||  ||||||||||||| | ||| |||||| | | |||| |||||| ||||||||||||||| ||||| | ||||| ||||||  ||| ||    
T  15786957 atcatttggtccattaacttattttttgttttcattttgttcccctaactataaactgtctcaatttggtcccataacttttctgccgtttatcattatg 15787056  T
Q  601 gtcatcttcgttaattttt 619  Q
     || ||| |||||||||||    
T  15787057 atcctctccgttaattttt 15787075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 603
Target Start/End: Complemental strand, 48207824 - 48207726
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||  ||||||||||||| | ||| ||||||||   |||||||||||||||||||||||||||  |||| ||||||  ||||||| ||| |||||    
T  48207824 tttggtcctttaacttattttttgttttcattttggtctcctaattataaagtgtctcaatttggtcatataactcttctaccgtttacaattgtggtc 48207726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 50531814 - 50531700
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 653  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||| ||||| |  |||| | || |||||| || || | || |||| |||| ||||      
T  50531814 aagtgtctcaatttggtcccataactcttttgtcgtttactattttagtcatttctgttagtattctaatgtctaatattttttatataatttcaaccgt 50531715  T
Q  654 ttgattgcaggtcta 668  Q
    |||||||||||||||    
T  50531714 ttgattgcaggtcta 50531700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 530 - 695
Target Start/End: Original strand, 3528224 - 3528389
Alignment:
Q  530 ttttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatat 629  Q
    ||||||||||||||  ||| |||||||||||||||||||||| ||||| | |||    |||||||| | | ||| ||| | ||| ||||||||||| ||     
T  3528224 ttttattttggttccttaactataaagtgtctcaatttggtcccataagttttcctctgtttactaatgtagtcctctccattagttttttaatgtctaa 3528323  T
Q  630 taatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 695  Q
    |  | || || | |||||||||| ||||||||| ||| || ||| |||| |||||||| |||||||    
T  3528324 ttttttttatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaaccgtcaacac 3528389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 550 - 603
Target Start/End: Original strand, 17319096 - 17319149
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||| ||||||||||  ||||||||||||| |||||||||||||||||    
T  17319096 tataaagtgtttcaatttggttccataaatcttctggcgtttactattttggtc 17319149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 559 - 619
Target Start/End: Complemental strand, 6140413 - 6140353
Alignment:
Q  559 tctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||| | ||||| |||||    
T  6140413 tctcaatttggttccataactcttctgtcgtttactattttggtcatttccgttagttttt 6140353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 613
Target Start/End: Complemental strand, 44128441 - 44128333
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    |||||||  |||||||||||||   ||| | |||||| | |||| |||||||||||||||||| |||   |||||||| || |||||||||||||||||     
T  44128441 tttggtcctttaacttatttttcattttcaatttggtcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtttactattttggtcc 44128342  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  44128341 tctccgtta 44128333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 491 - 571
Target Start/End: Complemental strand, 52882051 - 52881971
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||| |||  ||||||| ||||| |||||||| |||||||||||||| | || | ||||||||||||||||| ||||    
T  52882051 ggtttaatatatgttttggtcccttaatttatttttggattttattttggtcccctgactataaagtgtctcaattaggtc 52881971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 625
Target Start/End: Complemental strand, 56001375 - 56001255
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||||||||   ||| |||||||  | |||| ||||||||||||||||||||||  ||||   |||   ||||||||| | |||||     
T  56001375 tttggtcccttaacttattttttattttcattttggccccctaactataaagtgtctcaatttggtcctataagctttcctccgtttactaatgtggtcc 56001276  T
Q  605 tcttcgttaattttttaatgt 625  Q
    ||||||||| |||||||||||    
T  56001275 tcttcgttagttttttaatgt 56001255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 571
Target Start/End: Complemental strand, 28370765 - 28370682
Alignment:
Q  488 attggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||  ||  ||||||| |||||||||||||| ||||| | |||||| |||||| | |||| |||||||||||||||    
T  28370765 attggtttaatacatgctttggtcccttaacttatttttggatttcaatttggtcctctaactttaaactgtctcaatttggtc 28370682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 536 - 619
Target Start/End: Original strand, 50530543 - 50530626
Alignment:
Q  536 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||| || ||| ||| |||||||||||  ||||| ||||| |||||| |||||||||||||||||||| |  ||||||||||    
T  50530543 tttggtcctttaactattaagtgtctcaaaatggtcccataactcttctatcgtttactattttggtcatttctgttaattttt 50530626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 513 - 603
Target Start/End: Original strand, 56000304 - 56000394
Alignment:
Q  513 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||||| |||||| |||||| | | |||| |||||||||||||||||| |||  |||| ||||||| ||||||| |||||||||    
T  56000304 cttaacttattttt-gattttcattttgatcccctaactataaagtgtctcaatttagtcctataactcttctgccgtttaccattttggtc 56000394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 23752025 - 23752091
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||||||||| | |||||| | |||| | |||| |||||||||||||||    
T  23752025 tttggtcccttaacttatttttagatttcaatttggtcccctaactttaaattgtctcaatttggtc 23752091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 600
Target Start/End: Original strand, 26121920 - 26121974
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||||| |||||||| || ||||||||| |||||||||| |||||||    
T  26121920 taattataaagtgtttcaatttgatcccataaatctcctgtcgtttagtattttg 26121974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 619
Target Start/End: Original strand, 44302729 - 44302843
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||| ||||||  |||| || |||||  ||||| ||||||||||||||||||| || ||||||| ||||| | ||  || ||||||||     
T  44302729 tttggtcccttaactaatttttgaatttcatattggtcatctaactataaagtgtctcaatttgatcccataaattttctgccattacctcttttggtcc 44302828  T
Q  605 tcttcgttaattttt 619  Q
    ||| ||||| |||||    
T  44302829 tctccgttagttttt 44302843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 53401558 - 53401492
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||| ||||||||||| || |  ||| |||||| |||||||||||||||    
T  53401558 tttggtcccttaacttatttttggattttattttagtcccataactataaactgtctcaatttggtc 53401492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 501 - 690
Target Start/End: Original strand, 39590946 - 39591135
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||  ||||| | ||   | ||||||||||||| ||||     
T  39590946 atcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaaactggtcccttatgccatctgtcgtttactgtttta 39591045  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatc 690  Q
    ||| ||   |||| |||||| |||| || || | || |||| ||| |||||  ||||||||||||| || |||  | | |||||||||||    
T  39591046 gtcctcgcagttagtttttttatgtctaatatttttaatatgattataaccgtttgattgcaggtccatagtatattacagtgaaccatc 39591135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 579 - 652
Target Start/End: Complemental strand, 43895650 - 43895577
Alignment:
Q  579 tcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaacca 652  Q
    |||||| |||||  ||||||||||||||| ||||||||||||||||| || || | ||||| | ||||||||||    
T  43895650 tcttctctcgttatctattttggtcatctccgttaattttttaatgtctaatatttttgatgtaattttaacca 43895577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 603
Target Start/End: Original strand, 44126605 - 44126705
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctca--atttggtctcataaatcttctgtcgtttactattttggt 602  Q
    ||||||| ||||||||||||||   ||| | ||||||  ||||| ||||||| ||||||  |||||||| | |||||||| || ||||||||||||||||    
T  44126605 tttggtcccttaacttatttttcattttcaatttggtcttctaactataaagagtctcacaatttggtcccttaaatcttatgccgtttactattttggt 44126704  T
Q  603 c 603  Q
    |    
T  44126705 c 44126705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 666
Target Start/End: Original strand, 52658920 - 52659081
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||||||||   ||| | |||||| | |||| |||||| ||| ||||||||||   |||||||||||| ||||||| | ||| ||||    
T  52658920 tttggtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggttctataaatcttctgccgtttaccagtttagtca 52659019  T
Q  605 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    | | ||||  |||||||||||  | || | |||||||  ||| ||||| | |||||||||||    
T  52659020 tttccgtttgttttttaatgttaaatatttttgatattgtttcaaccattcgattgcaggtc 52659081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 491 - 571
Target Start/End: Complemental strand, 38555397 - 38555317
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||| | || ||| ||| |||||||||||||||| ||||| |||||| | |||| |||||||||| | |||||||||    
T  38555397 ggtttaatatctcgttttgtcccttaacttatttttagtttttactttggtcccctaactataaagtgtattaatttggtc 38555317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 600
Target Start/End: Original strand, 29663691 - 29663746
Alignment:
Q  545 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||| |||||| ||||||||||||||| ||||| ||||||| ||||||| ||||||    
T  29663691 ctaactataaattgtctcaatttggtcccataactcttctgccgtttaccattttg 29663746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 620
Target Start/End: Original strand, 29686261 - 29686380
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| ||| |||||||||||||| | ||| | |||||| |  ||| |||||| |||||||| |||||| | ||  |||| |||||||  || |||||    
T  29686261 atcatttagtcccttaacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtcccttatgtcttatgtcgttacctcttttg 29686360  T
Q  601 gtcatcttcgttaatttttt 620  Q
    ||| ||| ||||||||||||    
T  29686361 gtcctctccgttaatttttt 29686380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 530 - 605
Target Start/End: Complemental strand, 52660296 - 52660221
Alignment:
Q  530 ttttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 605  Q
    ||||||||||||   |||| |||||||| ||| |||| |||| ||||||||||||| ||||||| |||||| ||||    
T  52660296 ttttattttggtctcctaactataaagtatcttaattcggtcccataaatcttctgccgtttaccattttgatcat 52660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 52880830 - 52880889
Alignment:
Q  513 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||  |||||| |||||||| | |||| ||||||||||||||||||||||    
T  52880830 cttaacttattttcggatttttattttggtcccctaactataaagtgtctcaatttggtc 52880889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 526826 - 526760
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||| |||||||  ||||| |||||||| | |||| ||||||||||||||| ||||||    
T  526826 tttggtcccttaatttattttcggatttcattttggtcccctaactataaagtgtctcaacttggtc 526760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 567
Target Start/End: Complemental strand, 937205 - 937143
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 567  Q
    ||||||| ||||| |||||||  ||||| |||||||| | |||| ||||||||||||||||||    
T  937205 tttggtcccttaatttattttcggatttcattttggtcccctaactataaagtgtctcaattt 937143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 2310889 - 2310823
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| |||||| |||||||||||||||    
T  2310889 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaaatgtctcaatttggtc 2310823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 30672171 - 30672105
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| |  ||| | ||||||||||||||||||||    
T  30672171 tttggtcccttaacttattttcggatttcattttggtcccgtaactttaaagtgtctcaatttggtc 30672105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 567
Target Start/End: Complemental strand, 44690962 - 44690900
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 567  Q
    ||||||| |||||||||||||  ||||| ||||||||||  ||| |||||| |||||||||||    
T  44690962 tttggtcccttaacttattttcggatttcattttggttccataactataaaatgtctcaattt 44690900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 47668708 - 47668606
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||  ||||||||||||  | ||| | |||||| | |||| ||||||||||||||| |||||| | || ||| |||| |||||| | |||||    
T  47668708 atcatttggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttatatcatctgccgtttattgttttg 47668609  T
Q  601 gtc 603  Q
    |||    
T  47668608 gtc 47668606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 603
Target Start/End: Complemental strand, 43419437 - 43419384
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||||||||||||| | ||| ||||||| ||||  |||||||||||    
T  43419437 tataaagtgtctcaatttggtcccttaactcttctgccgttacctattttggtc 43419384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 619
Target Start/End: Original strand, 44159143 - 44159208
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||| ||||||||||  || || ||||||| |||||| |||||||||||||| ||||| |||||    
T  44159143 aagtgtttcaatttggttccacaactcttctgccgtttattattttggtcatctccgttagttttt 44159208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 577
Target Start/End: Complemental strand, 56297783 - 56297714
Alignment:
Q  508 ggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    |||| ||||||||||||||  |||| |||||| | |  ||||| |||| |||||||||||||||||||||    
T  56297783 ggtcccttaacttatttttgaatttcattttgatcccttaattttaaactgtctcaatttggtctcataa 56297714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 6e-33; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 501 - 613
Target Start/End: Original strand, 19278358 - 19278470
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| ||||| |||||||| |  |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||    
T  19278358 atcatttggtcccttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataattcttctgccgtttactattttg 19278457  T
Q  601 gtcatcttcgtta 613  Q
    ||| |||||||||    
T  19278458 gtcctcttcgtta 19278470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 505 - 620
Target Start/End: Complemental strand, 43936247 - 43936132
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| ||||| |||||||| |||||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||     
T  43936247 tttggtcccttaacttatttttggatttcattttggtcctctaactataaagtttcttaatttggtctcataattcttctgtcgtttactattttggtcc 43936148  T
Q  605 tcttcgttaatttttt 620  Q
    ||| ||||| ||||||    
T  43936147 tctccgttagtttttt 43936132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 546 - 699
Target Start/End: Original strand, 27897742 - 27897896
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcatt 645  Q
    |||||||||| ||| ||||||||||| |||||||  | |||| | |||||||||  |||| | | ||||||||||||||||||||| |||||||||||||    
T  27897742 taattataaaatgtttcaatttggtcccataaattatttgtcatctactattttaatcatttcccttaattttttaatgtatattattcttgatatcatt 27897841  T
Q  646 ttaaccacttgattgcaggtctatggtaact-aagagtgaaccatcaacacttga 699  Q
    ||||||||||||||||||||||||  ||  | |||||||||||||| ||||||||    
T  27897842 ttaaccacttgattgcaggtctataatatttaaagagtgaaccatcgacacttga 27897896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 505 - 599
Target Start/End: Original strand, 43935194 - 43935288
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||| |||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43935194 tttggtcccttaacttatttttggatttcattttggtcctctaactataaagtgtctcaatttggtctcataaatcttctgccgtttactatttt 43935288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 505 - 599
Target Start/End: Complemental strand, 7347327 - 7347233
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||| ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||| |||||||||| |||||    
T  7347327 tttggtcccttaacttaattttagattttattttggttccataattataaagtgtctcaatttggtcctataaatcttatgtcgtttaccatttt 7347233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 501 - 625
Target Start/End: Complemental strand, 13446769 - 13446645
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||||||  || |||| ||||||||||||||||| ||||||||||||| |||||| ||| |||    
T  13446769 atcatttggtcacttaacttatttttggttttcactttggttcttcaactatatagtgtctcaatttggtcccataaatcttctgccgtttattatattg 13446670  T
Q  601 gtcatcttcgttaattttttaatgt 625  Q
    ||| ||| ||||| |||||||||||    
T  13446669 gtcctctccgttagttttttaatgt 13446645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 489 - 613
Target Start/End: Original strand, 22060456 - 22060580
Alignment:
Q  489 ttggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcg 588  Q
    |||| ||||| |||||||||||| |||||||||||||  | ||||| |||||| |||||| |||||||||||||||||||||  || || |||| || ||    
T  22060456 ttggcttaatatatcatttggtcacttaacttattttgtgtttttaatttggtcctctaactataaagtgtctcaatttggttccacaagtcttatgccg 22060555  T
Q  589 tttactattttggtcatcttcgtta 613  Q
    ||||||||||||||||||| |||||    
T  22060556 tttactattttggtcatctccgtta 22060580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 536 - 620
Target Start/End: Original strand, 35127850 - 35127934
Alignment:
Q  536 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttttt 620  Q
    ||||||||||||| |||||| ||||||||||| ||| |||||||||| || ||||||||||||||||||||||||||||| ||||    
T  35127850 tttggttctctaactataaaatgtctcaattttgtcccataaatcttatgccgtttactattttggtcatcttcgttaatatttt 35127934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 514 - 661
Target Start/End: Complemental strand, 24873695 - 24873548
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    ||||||||||||| | ||| |||||| | | |||| |||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||| | ||||     
T  24873695 ttaacttattttttgttttcattttgatgccctaactataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgttt 24873596  T
Q  614 attttttaatgtatattaatcttgatatcattttaaccacttgattgc 661  Q
     ||||||||||| || || | |||||||  ||| ||||| ||||||||    
T  24873595 gttttttaatgtttactatttttgatattgtttcaaccatttgattgc 24873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 513 - 620
Target Start/End: Original strand, 47163170 - 47163277
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    ||||| |||||||| |||||||||||||| |||||| ||||||||| || ||||||||| |||||||||| |  ||||||||||||||||| ||| ||||    
T  47163170 cttaatttatttttggattttattttggtcctctaactataaagtgccttaatttggtcccataaatctttttccgtttactattttggtcctctccgtt 47163269  T
Q  613 aatttttt 620  Q
    | ||||||    
T  47163270 agtttttt 47163277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 599
Target Start/End: Complemental strand, 4858455 - 4858357
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||| |||||||||||||||| ||| | |||| | | |||| |||||| ||||||||||||||| |||||||||||||| ||||||||||||    
T  4858455 atcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcccataaatcttctgttgtttactatttt 4858357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 505 - 603
Target Start/End: Complemental strand, 19279719 - 19279621
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  19279719 tttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaattttttgtcgtttactattttggtc 19279621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 494 - 619
Target Start/End: Original strand, 43930317 - 43930442
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 592  Q
    ||||| |||||||||||| |||||||||||||| |||||| | |||||| | |||| ||| ||  ||||||||||||||  |||||||||||||||||||    
T  43930317 ttaatatatcatttggtcccttaacttattttt-gattttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgttta 43930415  T
Q  593 ctattttggtcatcttcgttaattttt 619  Q
    ||||||||||| |||  ||||||||||    
T  43930416 ctattttggtcctctctgttaattttt 43930442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 505 - 605
Target Start/End: Original strand, 36702786 - 36702886
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||||||||| |||||||| |  ||| | |||| ||||||||||||||| ||||||| ||||| |||||||||||||| |||    
T  36702786 tttggtcccttaacttatttttagatttcattttggtcccttaactttaaactgtctcaatttggtcccataaatattctgccgtttactattttgatca 36702885  T
Q  605 t 605  Q
    |    
T  36702886 t 36702886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 505 - 617
Target Start/End: Original strand, 41126248 - 41126360
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||||||| |||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  41126248 tttggtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 41126347  T
Q  605 tcttcgttaattt 617  Q
    ||| |||||||||    
T  41126348 tctccgttaattt 41126360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 489 - 577
Target Start/End: Complemental strand, 41516467 - 41516379
Alignment:
Q  489 ttggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    |||||||||| ||||||||||||||||||||||||||| | ||| |||||||| | |||| |||||||||||| ||||||||| |||||    
T  41516467 ttggtttaatatatcatttggtctcttaacttattttttgttttaattttggtcccctaactataaagtgtcttaatttggtcccataa 41516379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 494 - 599
Target Start/End: Complemental strand, 43007767 - 43007662
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 592  Q
    ||||| ||||||||||||  | ||||||||||| |||||| | |||||| |||||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  43007767 ttaatatatcatttggtccttcaacttattttt-gattttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttatgtcgttta 43007669  T
Q  593 ctatttt 599  Q
    |||||||    
T  43007668 ctatttt 43007662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 515 - 613
Target Start/End: Original strand, 48754015 - 48754113
Alignment:
Q  515 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    ||||||||||||||||||||||||||| |  |||||||||||||| ||||||| |||  ||||||||| |||||||||| ||||| ||| ||| |||||    
T  48754015 taacttatttttagattttattttggtcccataattataaagtgtttcaatttagtcctataaatcttatgtcgtttaccattttagtcctctccgtta 48754113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 625
Target Start/End: Complemental strand, 40926643 - 40926506
Alignment:
Q  488 attggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtc 587  Q
    ||||| |||||  ||||||| ||| |||||||||||||| | ||| | |||||| | |||| ||||||||||||||||||||||  |||||| ||||  |    
T  40926643 attggcttaatacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcctataaattttctacc 40926544  T
Q  588 gtttactattttggtcatcttcgttaattttttaatgt 625  Q
    ||||||  |||||||| ||| |||||| ||||||||||    
T  40926543 gtttaccgttttggtcctctccgttaactttttaatgt 40926506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 613
Target Start/End: Complemental strand, 48672883 - 48672774
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||||| |||||||| | ||||| ||||||||  | ||| |||||||||||||||||||| ||||||||   |||||||||||||||| |||    
T  48672883 atttggtctcttaatttattttttgtttttaatttggttccattattgtaaagtgtctcaatttggtcccataaatcgcgtgtcgtttactattttagtc 48672784  T
Q  604 atcttcgtta 613  Q
     ||| |||||    
T  48672783 ctctccgtta 48672774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 620
Target Start/End: Original strand, 22744751 - 22744870
Alignment:
Q  501 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||| |||||||||||||| |||||| | ||| || | |||| |||||||||| |||||||||||  ||||||||| || |||||||||||||    
T  22744751 atcatttggtcccttaacttattttt-gattttcaatttagtcccctaactataaagtgtttcaatttggtcctataaatcttatgccgtttactatttt 22744849  T
Q  600 ggtcatcttcgttaatttttt 620  Q
    |||| ||| ||||||| ||||    
T  22744850 ggtcttctccgttaatatttt 22744870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 613
Target Start/End: Original strand, 43006390 - 43006502
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| ||| |||||||||||||||||| | ||| |||| || ||||| ||||||||    
T  43006390 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcccctaagtcttatgccgtttgctattttg 43006489  T
Q  601 gtcatcttcgtta 613  Q
    ||||||| |||||    
T  43006490 gtcatctccgtta 43006502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 36703062 - 36702959
Alignment:
Q  501 atcatttggtctcttaacttatttttag-attttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||| |||||||||||||| | |||| ||||| || | |||| | |||| ||||||||||||||| ||||||| ||||| |||||||||||||    
T  36703062 atcatttggtcccttaacttattttttggatttcattttagtcccctaaatttaaactgtctcaatttggtcccataaatattctgccgtttactatttt 36702963  T
Q  600 ggtc 603  Q
    ||||    
T  36702962 ggtc 36702959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 623
Target Start/End: Original strand, 14206722 - 14206800
Alignment:
Q  545 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaat 623  Q
    |||| |||||| ||| |||||||||||  ||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  14206722 ctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttttaat 14206800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 623
Target Start/End: Original strand, 14215412 - 14215490
Alignment:
Q  545 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaat 623  Q
    |||| |||||| ||| |||||||||||  ||||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  14215412 ctaactataaaatgtttcaatttggtcctataaatcttctgtcgtttactattttgctcatctccgttagttttttaat 14215490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 501 - 599
Target Start/End: Complemental strand, 18802500 - 18802402
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||| |||||||||||||| | ||| |||||| | | |||| |||||||||||||||||| ||| ||||||| |||| ||||| ||||||||    
T  18802500 atcatttggtcccttaacttattttttgttttcattttgatcccctaactataaagtgtctcaatttagtcccataaattttctatcgttcactatttt 18802402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 491 - 613
Target Start/End: Complemental strand, 22746441 - 22746319
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||||  || ||||||||  ||||||||||||| | ||| | ||| || | |||| |||||||||||||||||||||| |||||||||| || ||||    
T  22746441 ggtttaatacattatttggtcctttaacttattttttgttttcaatttagtcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtt 22746342  T
Q  591 tactattttggtcatcttcgtta 613  Q
    |||||||||| || ||| |||||    
T  22746341 tactattttgatcctctccgtta 22746319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 14107837 - 14108002
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||  ||||||||||||| | ||| |||||||| |  ||| |||||||||||||||  ||||| | || ||||||||||||| ||  |||||    
T  14107837 atcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttg 14107936  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    ||| ||| ||||| |||||| |||| || || | || |||| ||| |||||  |||||||||||||    
T  14107937 gtcctctccgttagttttttgatgtctaatatttttaatataattataaccgtttgattgcaggtc 14108002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 14417794 - 14417959
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||  ||||||||||||| | ||| |||||||| |  ||| |||||||||||||||  ||||| | || ||||||||||||| ||  |||||    
T  14417794 atcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttg 14417893  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    ||| ||| ||||| |||||| |||| || || | || |||| ||| |||||  |||||||||||||    
T  14417894 gtcctctccgttagttttttgatgtctaatatttttaatataattataaccgtttgattgcaggtc 14417959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 488 - 603
Target Start/End: Original strand, 25153650 - 25153765
Alignment:
Q  488 attggtttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgt 586  Q
    ||||| |||||  ||||||||||| |||||||||||||  |||||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||      
T  25153650 attggcttaatacatcatttggtcccttaacttattttc-gattttcaatttggtcccctaactataaagtgtctcaatttggtcccataaatcttcttc 25153748  T
Q  587 cgtttactattttggtc 603  Q
    |||||||  ||||||||    
T  25153749 cgtttaccgttttggtc 25153765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 494 - 662
Target Start/End: Original strand, 41514996 - 41515162
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| ||||||||| || ||||| |||||||| | ||| |||||||||| |||| |||||||||| ||||||||||| ||||| |||||    ||||||    
T  41514996 ttaatatatcatttg-tcccttaatttatttttggttttaattttggttc-ctaactataaagtgtttcaatttggtcccataagtcttcatatgtttac 41515093  T
Q  594 tattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 662  Q
    |||| ||||  ||| ||||||||||||||||| ||    | || |||| |||||||||| |||||||||    
T  41515094 tattgtggttctctccgttaattttttaatgtctaaagttttttatatgattttaaccatttgattgca 41515162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 613
Target Start/End: Complemental strand, 41618606 - 41618498
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| ||||| |||||||| | ||||||||||||||||| |||||||||   ||  ||||||||||||  || ||||||||     
T  41618606 tttggtcccttaacttatttttggatttcattttggtcccctaattataaagtgtctaaatttggtccattatgtcttctgtcgttacctcttttggtcc 41618507  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  41618506 tctccgtta 41618498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 613
Target Start/End: Complemental strand, 46675045 - 46674933
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||| || |||||||||||||| | ||| | |||| | |  ||| ||||||||||||| |||||||| |||||||||| || ||||||||||||||    
T  46675045 atcatttgatcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcgatttggtcccataaatcttttgccgtttactattttg 46674946  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  46674945 gtcctctccgtta 46674933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 504 - 619
Target Start/End: Original strand, 38406026 - 38406141
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||||  |||| |||||||| | ||| |||||||| | |||| |||||||||||||||  ||||  ||||||||||||| |||||||| ||||||||    
T  38406026 atttggtcctttaatttatttttggttttcattttggtcccctaactataaagtgtctcaaactggttccataaatcttctgacgtttactgttttggtc 38406125  T
Q  604 atcttcgttaattttt 619  Q
     | | |||||||||||    
T  38406126 ctttccgttaattttt 38406141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 4857206 - 4857324
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||| || |||||||||||||| | ||| | |||||| | |||| |||||| |||||| |||||||| || |||||||||| |||||||| ||||     
T  4857206 atcatttgatcccttaacttatttttggttttcactttggtcccctaactataaaatgtctcgatttggtcccacaaatcttctgccgtttactgtttta 4857305  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||| ||| ||||| |||||    
T  4857306 gtcctctccgttagttttt 4857324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 567
Target Start/End: Original strand, 13446388 - 13446450
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 567  Q
    |||||||  |||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  13446388 tttggtcctttaacttatttttgaattttattttggttctctaactataaagtgtctcaattt 13446450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 583
Target Start/End: Complemental strand, 17288327 - 17288249
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 583  Q
    ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||    
T  17288327 tttggtcccttaacttattttttgttttaattttggtcccctaactataaagtgtctcaatttggtcccataagtcttc 17288249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 579
Target Start/End: Original strand, 18801224 - 18801298
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaat 579  Q
    ||||||| ||||||||||||||  |||| |||||||| | |||| |||||||||||||||||||||| |||||||    
T  18801224 tttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaat 18801298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 579
Target Start/End: Complemental strand, 19848941 - 19848867
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaat 579  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| |||||||    
T  19848941 tttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataaat 19848867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 501 - 583
Target Start/End: Complemental strand, 33459654 - 33459572
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 583  Q
    ||||||| ||| | |||||||||||| | ||| |||||||| |||||| |||||||||||||||||||||| ||||| |||||    
T  33459654 atcatttagtcccataacttatttttggttttcattttggtcctctaactataaagtgtctcaatttggtcccataagtcttc 33459572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 603
Target Start/End: Complemental strand, 36673943 - 36673845
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||| ||||||||||||||| | ||  ||||||||||||  || ||||||||    
T  36673943 tttggtcccttaacttattttcggattttattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtc 36673845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 38002621 - 38002555
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||||||||||||||||| |||||| |||||||| |  ||| ||||||||||||||||||||||    
T  38002621 tttggtctcttaacttattttcagatttcattttggtcccttaactataaagtgtctcaatttggtc 38002555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 501 - 613
Target Start/End: Complemental strand, 22061906 - 22061794
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| ||| |||||||||||||  | ||| | |||||| | |||| ||||||  |||||||||||||| |||||||||| || |||||||||||||     
T  22061906 atcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcccataaatcttatgccgtttactatttta 22061807  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  22061806 gtcttctccgtta 22061794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 551 - 619
Target Start/End: Original strand, 26406180 - 26406248
Alignment:
Q  551 ataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||||||||||||| |||||||| ||||||| ||||||  ||||||||||||| ||||| |||||    
T  26406180 ataaagtgtctcaatttgatctcataactcttctgccgtttaacattttggtcatctccgttatttttt 26406248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 30222655 - 30222763
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    |||||||  |||| |||||||| ||||| |||||||| | ||||||||||||| ||||||||||||| | ||  ||||||||||||  || ||||||||     
T  30222655 tttggtcctttaatttatttttggatttcattttggtcccctaattataaagtatctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 30222754  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  30222755 tctccgtta 30222763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 504 - 571
Target Start/End: Original strand, 33341306 - 33341373
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtc 571  Q
    ||||||||||||||||||||||| ||||||||||||| |||| ||| |||||| |||||||||||||||    
T  33341306 atttggtctcttaacttatttttggattttattttgg-tctcataactataaattgtctcaatttggtc 33341373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 513 - 605
Target Start/End: Original strand, 34557414 - 34557506
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 605  Q
    |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | ||  |||| || |||||| | ||||||||||    
T  34557414 cttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgtttattcttttggtcat 34557506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 513 - 625
Target Start/End: Complemental strand, 45721865 - 45721753
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||||| ||| |||||||| | |||| |||||||||||||||||||||  ||||| | |||   ||||||||| | || || ||| ||||    
T  45721865 cttaacttatttttagttttcattttggtcccctaactataaagtgtctcaatttggttccataagttttcctccgtttactaatgtgatcctctccgtt 45721766  T
Q  613 aattttttaatgt 625  Q
    | |||||||||||    
T  45721765 agttttttaatgt 45721753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 501 - 612
Target Start/End: Complemental strand, 25155047 - 25154936
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||| | |  ||| ||||||||||||||||||  |||||||||||||||   |||||  ||||||    
T  25155047 atcatttggtcccttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttaatctcataaatcttcttctgtttatcattttg 25154948  T
Q  601 gtcatcttcgtt 612  Q
    ||||||| ||||    
T  25154947 gtcatctccgtt 25154936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 1884249 - 1884315
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||||  ||||||||||||| |  |||||||||| |||||||||||||||    
T  1884249 tttggtcccttaacttatttttgaattttattttggtcccttaattataaaatgtctcaatttggtc 1884315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 501 - 579
Target Start/End: Original strand, 1970818 - 1970896
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaat 579  Q
    ||||| ||||||||||| |||||||| | ||||| ||||||||  ||| |||||||||| ||||||||||| |||||||    
T  1970818 atcatctggtctcttaatttatttttggtttttactttggttccttaactataaagtgtttcaatttggtcccataaat 1970896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 38408392 - 38408283
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 592  Q
    ||||| |||||||||||| ||||| |||||||| |||||| | |||||| |||||| ||||||||||||||| |||||| | ||  ||||||| ||||      
T  38408392 ttaatatatcatttggtcccttaatttattttt-gattttcactttggtcctctaactataaagtgtctcaaattggtcccttatgtcttctgccgttat 38408294  T
Q  593 ctattttggtc 603  Q
    |||||||||||    
T  38408293 ctattttggtc 38408283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 41616633 - 41616699
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  41616633 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 41616699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 612
Target Start/End: Complemental strand, 46458775 - 46458713
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||||||||||| ||||||||||||  ||||||| ||||||||| ||| ||||    
T  46458775 tataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcctctccgtt 46458713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 513 - 602
Target Start/End: Complemental strand, 7148157 - 7148068
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 602  Q
    |||||||||||||  | ||| | ||||||  ||||| |||||||||| ||||||||||| | |||||||| ||||||||||| |||||||    
T  7148157 cttaacttattttctgttttcaatttggtcatctaactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggt 7148068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 25532151 - 25532314
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||| ||  ||||||||||||| | ||| | |||||| | |||| |||||||||| || |||| |||||||||||||| ||  ||||||||||| |    
T  25532151 atcatttgatcctttaacttattttttg-tttcaatttggtcccctaactataaagtgtttcgatttagtctcataaatcttttgcagtttactatttag 25532249  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
     ||   ||||||| ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  25532250 -tctctttcgttagttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 25532314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 545 - 602
Target Start/End: Original strand, 45719664 - 45719721
Alignment:
Q  545 ctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 602  Q
    |||| |||||||||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  45719664 ctaactataaagtgtctaaatttggtctcataactcttctgttgtttaccattttggt 45719721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 613
Target Start/End: Original strand, 33458315 - 33458426
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||  ||||||||||||| | ||| |||||||| || ||| ||||||||||||||| || ||| ||||| ||||||  ||||||||| | ||    
T  33458315 atcatttggtcctttaacttatttttggttttcattttggtcctttaactataaagtgtctcaa-ttagtcccataagtcttcttccgtttactaatgtg 33458413  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  33458414 gtcctctccgtta 33458426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 605
Target Start/End: Original strand, 38001513 - 38001613
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||   |||| |||||||| |||||| |||||||||| ||||||||||| | ||  |||| |||||||  || |||||||||    
T  38001513 tttggtcccttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggtcccttatgtcttttgtcgttatctcttttggtca 38001612  T
Q  605 t 605  Q
    |    
T  38001613 t 38001613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 625
Target Start/End: Complemental strand, 43931917 - 43931853
Alignment:
Q  561 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 625  Q
    ||||||||||| |||||| |||||||| |||||||||||||||  || ||||| |||||||||||    
T  43931917 tcaatttggtcccataaaccttctgtcatttactattttggtcccctccgttagttttttaatgt 43931853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 605
Target Start/End: Original strand, 46457087 - 46457179
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 605  Q
    |||||||||||||| | ||| | |||| | |  ||| |||||||||||||||||||||| ||||||||||||  | ||||| |||||||||||    
T  46457087 cttaacttatttttggttttcaatttgatcccttaactataaagtgtctcaatttggtcccataaatcttcttccatttaccattttggtcat 46457179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 536 - 603
Target Start/End: Complemental strand, 27899290 - 27899223
Alignment:
Q  536 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||| || ||| |||||| | |||||||||| || |||||||||| ||||||||||||||||||||    
T  27899290 tttggtcctttaactataaaatatctcaatttgatcccataaatcttttgtcgtttactattttggtc 27899223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 492 - 598
Target Start/End: Original strand, 48671074 - 48671179
Alignment:
Q  492 gtttaatgtatcatttggtctcttaacttatttttagattttattttggt-tctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    |||||||  ||||||||||||||||| |||||||| | ||||| |||| | ||| ||| |||||||| |||||||||| || |||||||||| || ||||    
T  48671074 gtttaatacatcatttggtctcttaatttatttttggtttttaatttgatctct-taactataaagtatctcaatttgatc-cataaatcttatgccgtt 48671171  T
Q  591 tactattt 598  Q
    ||||||||    
T  48671172 tactattt 48671179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 1885348 - 1885282
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||||  |||| |||||||| |  |||||||||||| |||||||||||||    
T  1885348 tttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtatctcaatttggtc 1885282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 662
Target Start/End: Complemental strand, 28326497 - 28326340
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||| || ||||| |||||||| | ||||||||||||   || | |||||||||||||||||||||   |||| |||||   ||||||||||| |||||    
T  28326497 atttgatcccttaatttatttttgg-ttttattttggtctcctgactataaagtgtctcaatttggttctataagtcttcctccgtttactattgtggtc 28326399  T
Q  604 atcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 662  Q
     ||| ||||| ||||||||||| ||    | || |||| |||||||||| |||||||||    
T  28326398 ctctccgttagttttttaatgtctaaattttttaatatgattttaaccatttgattgca 28326340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 30224083 - 30224017
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||| |||||||||||||||    
T  30224083 tttggtcccttaacttattttcggatttcattttggtcccctaactataaattgtctcaatttggtc 30224017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 34558408 - 34558342
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||| |||||||||||||    
T  34558408 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtc 34558342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 501 - 577
Target Start/End: Original strand, 28325078 - 28325153
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    ||||||||||| |||||||||||||| | ||| |||||||| | |||| | |||||| ||||||||||||| |||||    
T  28325078 atcatttggtc-cttaacttatttttggttttaattttggtcccctaactttaaagtatctcaatttggtcccataa 28325153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 605
Target Start/End: Original strand, 10256181 - 10256232
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 605  Q
    |||||||||||  ||||||||||| |||||| ||||||| ||||||||||||    
T  10256181 aagtgtctcaaaatggtctcataactcttctatcgtttagtattttggtcat 10256232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 668
Target Start/End: Complemental strand, 10257444 - 10257332
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccac 653  Q
    |||||||||||||||||| ||||| |||  |||||||||||||||| ||||| |  |||| | || |||||| || || | || |||| |||| ||||      
T  10257444 aagtgtctcaatttggtcccataactct--tgtcgtttactattttagtcatttctgttagtattctaatgtctaatattttttatataatttcaaccgt 10257347  T
Q  654 ttgattgcaggtcta 668  Q
    |||||||||||||||    
T  10257346 ttgattgcaggtcta 10257332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 568
Target Start/End: Complemental strand, 48755655 - 48755592
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 568  Q
    ||||||| ||||||||||||||  |||| |||||||| || ||| |||||| ||||||||||||    
T  48755655 tttggtcccttaacttatttttgaatttcattttggtcctataactataaaatgtctcaatttg 48755592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 2903061 - 2903119
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||  ||||| |||||| ||  |||| ||||||||||||||||||||||    
T  2903061 cttaacttattttcggatttcattttgatttcctaactataaagtgtctcaatttggtc 2903119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 7345923 - 7345989
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||| |||||| ||||| |||||||||    
T  7345923 tttggtcccttaacttatttttggatttcattttggtcccataaatataaactgtcttaatttggtc 7345989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 18670610 - 18670544
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||| |||||||||||||| |  ||| | |||| |||||||| ||||||    
T  18670610 tttggtcccttaacttatttttggattttattttggtcccttaactttaaaatgtctcaaattggtc 18670544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 21171593 - 21171527
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||| ||||| | |||||| | |||| | |||| |||||||||||||||    
T  21171593 tttggtcccttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttggtc 21171527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 491 - 525
Target Start/End: Complemental strand, 32894918 - 32894884
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttt 525  Q
    ||||||||||||||||||||| |||||||||||||    
T  32894918 ggtttaatgtatcatttggtcccttaacttatttt 32894884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 561 - 603
Target Start/End: Complemental strand, 35128242 - 35128200
Alignment:
Q  561 tcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||  ||||||||| ||||||||||||||||||||    
T  35128242 tcaatttggtcctataaatcttatgtcgtttactattttggtc 35128200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 567
Target Start/End: Original strand, 35480217 - 35480278
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 567  Q
    ||||||| |||||||||||||  ||||| ||||||| || |||| ||||||||||||||||||    
T  35480217 tttggtcccttaacttattttcggatttcattttgg-tccctaactataaagtgtctcaattt 35480278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 571
Target Start/End: Complemental strand, 41127270 - 41127212
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||  ||||| |||||||| | |||| |||||||| |||||||||||||    
T  41127270 cttaacttattttcggatttcattttggtcccctaactataaagtatctcaatttggtc 41127212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 623
Target Start/End: Original strand, 45089489 - 45089598
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| | ||| |||||||| ||||| | |||||||||||||||||  || ||||||| |||   |||||||||   | ||||| | ||||    
T  45089489 cttaacttatttttggttttcattttggtcctctact-ataaagtgtctcaatttaatcccataaattttcctccgtttactaacgtagtcatatccgtt 45089587  T
Q  613 aattttttaat 623  Q
    |||||||||||    
T  45089588 aattttttaat 45089598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 546 - 599
Target Start/End: Complemental strand, 35315288 - 35315235
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||| |||| | ||||||||||| ||||| |||||||||||||||| ||||    
T  35315288 taattattaagtatgtcaatttggtcccataagtcttctgtcgtttactgtttt 35315235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 603
Target Start/End: Original strand, 46673512 - 46673596
Alignment:
Q  518 cttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||||| | ||| | |||||| | ||||  ||||||||| ||||||||||| |||||||||| || |||||||||| ||||||    
T  46673512 cttatttttggttttcaatttggtcccctaacaataaagtgtttcaatttggtcccataaatcttatg-cgtttactatgttggtc 46673596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 2e-32; HSPs: 88)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 501 - 612
Target Start/End: Original strand, 43101899 - 43102010
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||    
T  43101899 atcatttggtcccttaacttatttttggttttcattttggtcctctaattataaagtgtctcaatttggtcccataattcttctgtcgcttactattttg 43101998  T
Q  601 gtcatcttcgtt 612  Q
     |||||| ||||    
T  43101999 atcatctccgtt 43102010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 501 - 613
Target Start/End: Complemental strand, 54654077 - 54653965
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  54654077 atcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataattcttctgtcgtttactattttg 54653978  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  54653977 gtcctctccgtta 54653965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 494 - 605
Target Start/End: Complemental strand, 51825739 - 51825628
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| |||||||||||| |||||||||||||| ||||| | |||||| |  ||| |||||||||| ||||||||||| |||||||||||||||||||||    
T  51825739 ttaatatatcatttggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataaatcttctgtcgtttac 51825640  T
Q  594 tattttggtcat 605  Q
    ||||||||||||    
T  51825639 tattttggtcat 51825628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 513 - 615
Target Start/End: Complemental strand, 47808205 - 47808103
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| ||||| | ||||||||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  47808205 cttaacttatttttggatttcactttggttccttaactataaagtgtctcaatttggtctcataaatcttctgtcgtttgctattttggtcctctccgtt 47808106  T
Q  613 aat 615  Q
    |||    
T  47808105 aat 47808103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 494 - 666
Target Start/End: Complemental strand, 8372734 - 8372562
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| |||| ||||||| |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||||||  |    ||||||    
T  8372734 ttaatatatcgtttggtcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaatccacaacagtttac 8372635  T
Q  594 tattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    ||||||||||| || ||||| ||||||||||| || || | ||||||| |||| ||||| | |||||||||||    
T  8372634 tattttggtcacctccgttagttttttaatgtttaatatttttgatatgatttcaaccattcgattgcaggtc 8372562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 11219439 - 11219547
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    |||||||  ||||||||||||| ||||| |||||||| | |||| |||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  11219439 tttggtccgttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtctcatgagtcttctgccgtttactattttggtca 11219538  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  11219539 tctccgtta 11219547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 505 - 625
Target Start/End: Complemental strand, 11220765 - 11220645
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||||||||  |||| |||||||| | |||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||     
T  11220765 tttggtcccttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgtcgtttactattttggtcc 11220666  T
Q  605 tcttcgttaattttttaatgt 625  Q
     || ||||  |||||||||||    
T  11220665 cctccgtttgttttttaatgt 11220645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 29536723 - 29536831
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||| |||||||||| ||||| |||||| | |||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||     
T  29536723 tttggtcccttgacttatttttggatttcattttgatcctctaactataaagtgtctcaatttggtcccataaatcttctttcgtttactattttggtcc 29536822  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  29536823 tctccgtta 29536831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 505 - 620
Target Start/End: Complemental strand, 47855445 - 47855330
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| ||||| |||||||| |  ||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||     
T  47855445 tttggtcccttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcc 47855346  T
Q  605 tcttcgttaatttttt 620  Q
    ||| ||||| ||||||    
T  47855345 tctccgttattttttt 47855330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 494 - 666
Target Start/End: Complemental strand, 32980570 - 32980398
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| ||||||||| ||  ||||||||||||  | ||| | |||||| | |||| || |||||||||||||||||||  |||||||||||| |||||||    
T  32980570 ttaatatatcatttgatccattaacttattttctgttttcaatttggtcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtttac 32980471  T
Q  594 tattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    |||||||||||||| ||||| ||||||||| | ||  | | ||||||| |||| ||||| | |||||||||||    
T  32980470 tattttggtcatctccgttagttttttaatttctaacatttttgatatgatttcaaccattcgattgcaggtc 32980398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 494 - 625
Target Start/End: Complemental strand, 25585951 - 25585820
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| ||| |||||||| ||||| ||||||||   ||| | | |||| |||||| ||| ||  ||||||||||||||||||||||||||||||||||||    
T  25585951 ttaatatattatttggtcccttaatttattttttattttcactctggtcctctaactattaaacgtctcaatttggtctcataaatcttctgtcgtttac 25585852  T
Q  594 tattttggtcatcttcgttaattttttaatgt 625  Q
    |||||| ||||||| ||||| |||||||||||    
T  25585851 tattttagtcatctccgttagttttttaatgt 25585820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 488 - 619
Target Start/End: Complemental strand, 26799030 - 26798899
Alignment:
Q  488 attggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtc 587  Q
    ||||| |||||  |||||||||||||||||||||||||| | |||||||||||| | |||| |||||| ||||||||||||||| ||||| |||||   |    
T  26799030 attggcttaatacatcatttggtctcttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataattcttcctcc 26798931  T
Q  588 gtttactattttggtcatcttcgttaattttt 619  Q
    |||||| ||||||||| ||| ||||| |||||    
T  26798930 gtttaccattttggtcctctccgttagttttt 26798899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 505 - 695
Target Start/End: Original strand, 48252942 - 48253132
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||||| || | |||||||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||| | | ||||    
T  48252942 tttggtcccttaacttattctttgtttttattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtagtca 48253041  T
Q  605 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 695  Q
    ||| ||||| ||||||||||| ||    | ||||| | |||||||||| ||||||||| ||| || ||| |||| |||||||  |||||||    
T  48253042 tctccgttagttttttaatgtctaaattttttgatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaactgtcaacac 48253132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 508 - 620
Target Start/End: Complemental strand, 13078055 - 13077943
Alignment:
Q  508 ggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatc 606  Q
    ||||||||||||||||||| |||||| | |||||| |||||| |||||| ||||| ||||||||| |||||||||| |||||||||||||||||| | ||    
T  13078055 ggtctcttaacttattttt-gattttcaatttggtcctctaagtataaaatgtcttaatttggtcccataaatcttatgtcgtttactattttggacctc 13077957  T
Q  607 ttcgttaatttttt 620  Q
    ||||||||| ||||    
T  13077956 ttcgttaatatttt 13077943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 505 - 620
Target Start/End: Original strand, 7820399 - 7820514
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||||||||  |||| |||||||| |||||| |||||||||| ||||||||| | ||||||| || ||||||||||| ||||||||     
T  7820399 tttggtcccttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttggacccataaattttatgtcgtttactgttttggtcc 7820498  T
Q  605 tcttcgttaatttttt 620  Q
    ||| ||||| ||||||    
T  7820499 tctccgttagtttttt 7820514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 8371225 - 8371343
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||| || |||||||||||||| | ||| |||||||| | |||| |||||| ||||||||||||||  |||||||||||||  |||||||||||||    
T  8371225 atcatttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataaatcttctgcagtttactattttg 8371324  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||| ||| ||||| |||||    
T  8371325 gtcctctccgttagttttt 8371343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 607
Target Start/End: Original strand, 53808323 - 53808429
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||  | ||| | ||||||   |||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  53808323 atcatttggtcccttaacttattttcggttttgaatttggtctcctaactataaagtgtctcaatctggtcccataaatcttatgtcgtttactattttg 53808422  T
Q  601 gtcatct 607  Q
    |||||||    
T  53808423 gtcatct 53808429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 501 - 613
Target Start/End: Original strand, 42632711 - 42632823
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| ||||||||| |||| | ||| | |||||| | |||| ||||||||||||||||||| || |||||||||| ||||||||||||||||     
T  42632711 atcatttggtcccttaacttacttttggttttcaatttggtcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgtttactatttta 42632810  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  42632811 gtcctctccgtta 42632823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 501 - 603
Target Start/End: Complemental strand, 42633997 - 42633895
Alignment:
Q  501 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||| |||||||||||||| |||||| | |||||| | |||| |||| ||||||||||||||||| |||||||||| ||||||||| ||||||    
T  42633997 atcatttggtcccttaacttattttt-gattttcaatttggtcccctaactatagagtgtctcaatttggtcccataaatcttatgtcgtttattatttt 42633899  T
Q  600 ggtc 603  Q
    ||||    
T  42633898 ggtc 42633895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 49122120 - 49122011
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctct-aattataaagtgtctcaatttggtctcataaatcttctgtcgttta 592  Q
    ||||| ||||||||||||  ||||||||||||| | ||| |||||||| |||| || |||||||||||||||||||||||||||| | ||||| ||||||    
T  49122120 ttaatatatcatttggtcctttaacttatttttggttttcattttggt-ctcttaactataaagtgtctcaatttggtctcataagttttctgccgttta 49122022  T
Q  593 ctattttggtc 603  Q
    | |||||||||    
T  49122021 ccattttggtc 49122011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 513 - 573
Target Start/End: Complemental strand, 39190823 - 39190763
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||    
T  39190823 cttaacttatttttagattttattttggtcccctaattataaagtgtctcaatttagtctc 39190763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 41386139 - 41386247
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||  ||||||||||  | |||||||||||||||||     
T  41386139 tttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataaatcttacgacgtttactattttggtcc 41386238  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  41386239 tctccgtta 41386247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 494 - 613
Target Start/End: Original strand, 51824124 - 51824243
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggt-tctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 592  Q
    ||||| ||||||||||||||||||||||||||||| ||||| |||| | ||| ||| | ||||||||||||||||| | |||||||||||||  | ||||    
T  51824124 ttaatatatcatttggtctcttaacttatttttagtttttactttgatctct-taaatttaaagtgtctcaatttgatttcataaatcttctaccattta 51824222  T
Q  593 ctattttggtcatcttcgtta 613  Q
    | ||||| ||||||| |||||    
T  51824223 ccatttttgtcatctgcgtta 51824243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 613
Target Start/End: Complemental strand, 53049144 - 53049036
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||  |||||||||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  53049144 tttggtcccttaacttattttcggattttattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 53049045  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  53049044 tctccgtta 53049036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 501 - 620
Target Start/End: Complemental strand, 10987764 - 10987645
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||| || |||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||||| || || |||||  |||||||    
T  10987764 atcatttgatcccttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataaattttatgccgttttttattttg 10987665  T
Q  601 gtcatcttcgttaatttttt 620  Q
    ||| |||  |||||| ||||    
T  10987664 gtcctctctgttaatatttt 10987645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 515 - 662
Target Start/End: Complemental strand, 19253099 - 19252952
Alignment:
Q  515 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 614  Q
    |||||||||||| | ||| | |||||| | ||||||||||| |||||||||||| || ||||||| ||||| ||||||| ||||||||| | | |||| |    
T  19253099 taacttatttttggttttcaatttggtcccctaattataaaatgtctcaatttgatcccataaatattctgccgtttaccattttggtcctgtccgttta 19253000  T
Q  615 ttttttaatgtatattaatcttgatatcattttaaccacttgattgca 662  Q
    ||||||||||| || || | || ||||  |||| |||| |||||||||    
T  19252999 ttttttaatgtctaatattttttatattgttttgaccatttgattgca 19252952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 550 - 669
Target Start/End: Original strand, 43345373 - 43345492
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaa 649  Q
    |||||| ||| ||||||||||| |||||||||||| |||||||| ||||||||  ||| ||||| ||||||||||| || || | ||||||| |||  ||    
T  43345373 tataaaatgtttcaatttggtcccataaatcttctctcgtttaccattttggttttctccgttagttttttaatgtttaatatttttgatatgattccaa 43345472  T
Q  650 ccacttgattgcaggtctat 669  Q
    ||| | ||||||||||||||    
T  43345473 ccattcgattgcaggtctat 43345492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 546 - 619
Target Start/End: Original strand, 23559869 - 23559942
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    ||||||| ||||||||||||||| || ||||| ||||||||||||||||||||||||| ||| ||||| |||||    
T  23559869 taattattaagtgtctcaatttgatcccataattcttctgtcgtttactattttggtcctctccgttagttttt 23559942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 507 - 592
Target Start/End: Complemental strand, 51401456 - 51401371
Alignment:
Q  507 tggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgttta 592  Q
    ||||| |||||||||||||| | ||| | |||||| | |||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  51401456 tggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcccataaatcttctgccgttta 51401371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 613
Target Start/End: Complemental strand, 32974330 - 32974222
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || |||||||||    
T  32974330 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtca 32974231  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  32974230 tctccgtta 32974222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 585
Target Start/End: Original strand, 32979097 - 32979177
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctg 585  Q
    ||||||| ||||||| ||||||| |||| |||||||| |||||| ||||||||||||||||||| || ||||||| |||||    
T  32979097 tttggtcccttaactaatttttaaatttcattttggtcctctaactataaagtgtctcaatttgatcccataaattttctg 32979177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 613
Target Start/End: Complemental strand, 41387544 - 41387432
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| |||||| |||    ||||||||||||||    
T  41387544 atcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcccataaaccttacaccgtttactattttg 41387445  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  41387444 gtcctctccgtta 41387432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 513 - 613
Target Start/End: Original strand, 47806835 - 47806934
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| ||||| |||||||| |  ||||||||||||||||||||||| ||  ||||||||||||  |||||| ||||||||| ||| ||||    
T  47806835 cttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttgatcctataaatcttctgctgtttac-attttggtcctctccgtt 47806933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 53047906 - 53048014
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  53047906 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 53048005  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  53048006 tctccgtta 53048014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 669
Target Start/End: Complemental strand, 53809604 - 53809436
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| ||| |||||||||||||| | ||| |||||||| | |||| | ||||  |||||||||| ||||||||| | |||   ||||||||| | |     
T  53809604 atcatttagtcccttaacttattttttgttttcattttggtcccctaactttaaaacgtctcaattttgtctcataagttttcctccgtttactaatgtt 53809505  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 669  Q
    ||||||| ||||| ||||||||||| ||    | ||||||| |||||||||| ||||||||| ||||||    
T  53809504 gtcatctccgttagttttttaatgtctaaattttttgatataattttaaccatttgattgcatgtctat 53809436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 530 - 613
Target Start/End: Original strand, 2124063 - 2124146
Alignment:
Q  530 ttttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    ||||| |||||||| |||| |||||| | ||| ||||||||| |||||||||| || ||||||||||||||||||||| |||||    
T  2124063 ttttaatttggttccctaactataaaatatcttaatttggtcccataaatcttatgccgtttactattttggtcatctccgtta 2124146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 25583119 - 25583237
Alignment:
Q  501 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||| ||| |||||||||||||| |||||| | |||||| | |||| ||| ||  |||||||||||||| ||||| ||||||| |||||||||||||    
T  25583119 atcatttagtcccttaacttattttt-gattttcactttggtcccctaactattaaacgtctcaatttggtcccataagtcttctgccgtttactatttt 25583217  T
Q  600 ggtcatcttcgttaattttt 619  Q
    |||| |||  ||||||||||    
T  25583218 ggtcctctctgttaattttt 25583237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 506 - 613
Target Start/End: Original strand, 39287480 - 39287587
Alignment:
Q  506 ttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 605  Q
    |||||| |||||||||||||  ||||| |||||||| |||||| |||||||||||||||||||||| | ||  | ||||||||||  || |||||||| |    
T  39287480 ttggtcccttaacttattttcggatttcattttggtcctctaactataaagtgtctcaatttggtcccttatgttttctgtcgttacctcttttggtcct 39287579  T
Q  606 cttcgtta 613  Q
    || |||||    
T  39287580 ctccgtta 39287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 7822093 - 7822027
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||| |||| ||||||||||||||   |||||||||||||||||||||||||||    
T  7822093 tttggtcccttaacttaattttggattttattttggtctcctaattataaagtgtctcaatttggtc 7822027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 501 - 618
Target Start/End: Original strand, 19622010 - 19622127
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||  |||| |||||||| | ||| | |||||| | |||| |||||||||||||||||| |||||||||||||||||   ||||||  ||||    
T  19622010 atcatttggtcctttaagttatttttggttttcactttggtcccctaactataaagtgtctcaatttagtctcataaatcttctgctatttactggtttg 19622109  T
Q  601 gtcatcttcgttaatttt 618  Q
    ||| ||| ||||| ||||    
T  19622110 gtcctctccgttagtttt 19622127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 571
Target Start/End: Original strand, 39133011 - 39133092
Alignment:
Q  490 tggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||  |||||||| ||||||||||||||||| | ||| | |||||| | |||| ||||||||||||||||||||||    
T  39133011 tggtttaatacatcatttgatctcttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtc 39133092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 494 - 603
Target Start/End: Complemental strand, 43103414 - 43103305
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| ||| ||||| || ||||||||||||||   |||||||||| | | |||| || ||| | |||||||||||| |||||||| ||||| |||||||    
T  43103414 ttaatatattatttgatcccttaacttattttttatttttattttgatcccctaactacaaaatatctcaatttggtttcataaattttctgccgtttac 43103315  T
Q  594 tattttggtc 603  Q
    ||||||||||    
T  43103314 tattttggtc 43103305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 514 - 687
Target Start/End: Complemental strand, 47767048 - 47766876
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    ||||||||||||| | ||| |||||||| | |||| |||||||||||||||||||||| ||||| |||||   ||||||||| | | ||| ||| |||||    
T  47767048 ttaacttatttttggttttcattttggtcc-ctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactaatgtcgtcctctgcgtta 47766950  T
Q  614 attttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaacc 687  Q
     ||||||||||| ||    | || || | |||||||||| ||||||||| ||| || ||| |||| ||||||||    
T  47766949 gttttttaatgtctaaatttttttatgtgattttaaccatttgattgcatgtccattgtatctaatagtgaacc 47766876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 505 - 590
Target Start/End: Original strand, 48825821 - 48825906
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||| |||||||||||||   ||||||||||| ||| |||| |||||||||||||||||||||| | ||  ||||||||||||    
T  48825821 tttggtcccttaacttattttcgaattttattttgattccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 48825906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 513 - 573
Target Start/End: Original strand, 48034026 - 48034086
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    |||||||||||||  |||||||||||||| |||||| ||||||||||||||||||| ||||    
T  48034026 cttaacttattttcggattttattttggtcctctaactataaagtgtctcaatttgatctc 48034086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 505 - 620
Target Start/End: Complemental strand, 29537249 - 29537134
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    |||| ||||||||||||||||| ||||| || ||  |   ||||||||||| ||| | ||||| ||| ||||||||||||| ||||||| |||||||||     
T  29537249 tttgttctcttaacttatttttggatttcatctttatctactaattataaaatgttttaatttcgtcccataaatcttctgccgtttacaattttggtcc 29537150  T
Q  605 tcttcgttaatttttt 620  Q
    ||| ||||| ||||||    
T  29537149 tctccgttagtttttt 29537134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 561 - 668
Target Start/End: Original strand, 35173212 - 35173319
Alignment:
Q  561 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattg 660  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| |   ||| | || |||||| || |||| || |||| |||| ||||  |||||||    
T  35173212 tcaatttggtctcataactcttttgtcgtttactattttggtcatttctattagtattctaatgtctaataatttttatataatttcaaccgtttgattg 35173311  T
Q  661 caggtcta 668  Q
    ||||||||    
T  35173312 caggtcta 35173319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 494 - 613
Target Start/End: Original strand, 36626729 - 36626848
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| ||||||||||||  ||||||||||||    ||  | |||||||  |||| ||| |||||| ||||||||||| | |||||||| ||||||||||    
T  36626729 ttaatatatcatttggtcctttaacttattttctatttacaatttggtttcctaactatgaagtgtttcaatttggtcccttaaatcttatgtcgtttac 36626828  T
Q  594 tattttggtcatcttcgtta 613  Q
    | |||||||| |||||||||    
T  36626829 tgttttggtcctcttcgtta 36626848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 517 - 620
Target Start/End: Complemental strand, 49334432 - 49334329
Alignment:
Q  517 acttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatt 616  Q
    |||||||||| | ||| |||||||| || ||| |||||| ||||||||| |||||  |||||||||||  |||||||||||||| ||||||  |||| ||    
T  49334432 acttattttttgttttcattttggtcctttaactataaattgtctcaatatggtccgataaatcttctaccgtttactattttgatcatctctgttagtt 49334333  T
Q  617 tttt 620  Q
    ||||    
T  49334332 tttt 49334329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 19579229 - 19579295
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||| |||||| |||||||| | |||| |||||| |||||||||||||||    
T  19579229 tttggtcccttaacttattttcagatttcattttggtcccctaactataaaatgtctcaatttggtc 19579295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 32973148 - 32973214
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  32973148 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 32973214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 39288546 - 39288480
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  39288546 tttggtcacttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 39288480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 567
Target Start/End: Complemental strand, 40502322 - 40502260
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 567  Q
    ||||||| |||||||||||||| |||||||||||||| | |||| |||||||| |||||||||    
T  40502322 tttggtcccttaacttatttttggattttattttggtcccctaactataaagtatctcaattt 40502260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 48035431 - 48035365
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  48035431 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 48035365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 603
Target Start/End: Original strand, 51400224 - 51400322
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| |||||||||||||| | ||| | |||| ||| |||| |||||||||||||||||| ||| ||||||| ||| | ||| ||| |||||||||    
T  51400224 tttggtcccttaacttatttttggttttcactttgattccctaactataaagtgtctcaatttagtcccataaattttcagccgtataccattttggtc 51400322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 52293630 - 52293564
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  52293630 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 52293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 501 - 603
Target Start/End: Original strand, 54752621 - 54752723
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| ||||||||||||||   ||| | ||| || | |||| ||||||||||||||||||||||   || ||||| || ||||||||||||||    
T  54752621 atcatttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcctgtatatcttatgccgtttactattttg 54752720  T
Q  601 gtc 603  Q
    |||    
T  54752721 gtc 54752723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 505 - 590
Target Start/End: Complemental strand, 19579401 - 19579316
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||| |||||||||||||  ||||| |||||||| |  ||| |||||||||||||||||||||| | ||  ||||||||||||    
T  19579401 tttggtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 19579316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 611
Target Start/End: Complemental strand, 43346505 - 43346448
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgt 611  Q
    |||||| ||||||||||||||||| ||||||||||||||  ||||||||||| |||||    
T  43346505 aagtgtgtcaatttggtctcataactcttctgtcgtttatcattttggtcattttcgt 43346448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 573
Target Start/End: Original strand, 7583479 - 7583547
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    |||||||  ||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||||    
T  7583479 tttggtccattaacttattttcggatttcattttggtccactaactataaagtgtctcaatttggtctc 7583547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 483 - 571
Target Start/End: Complemental strand, 17350231 - 17350143
Alignment:
Q  483 taataattggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||| ||| |||||  ||||||||||| |||||||||||||| | ||| | |||| | | |||| ||||||||||||||||||||||    
T  17350231 taataaatggcttaatacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtc 17350143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 573
Target Start/End: Complemental strand, 53347105 - 53347038
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||||    
T  53347105 tttggtcccttaacttattttcggatttcattttggtcc-ctaaatataaagtgtctcaatttggtctc 53347038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 505 - 568
Target Start/End: Original strand, 33563958 - 33564021
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 568  Q
    ||||||| |||||||||||||| ||||| ||||| || | |||| |||||||||||||||||||    
T  33563958 tttggtcccttaacttatttttggatttcattttagtcccctaactataaagtgtctcaatttg 33564021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 505 - 568
Target Start/End: Original strand, 35633236 - 35633299
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 568  Q
    ||||||| |||||||||||||| ||||| |||||||| || ||| |||||| ||||||||||||    
T  35633236 tttggtcccttaacttatttttggatttcattttggtcctataactataaaatgtctcaatttg 35633299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 1301041 - 1301107
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||   ||||||||||||| |  ||| ||||||||||||||||||||||    
T  1301041 tttggtcccttaacttattttcgaattttattttggtcccataactataaagtgtctcaatttggtc 1301107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 5416207 - 5416273
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| |||||| |||||||||||||||    
T  5416207 tttggtcccttaacttattttcggatttcattttggtcccctaactataaaatgtctcaatttggtc 5416273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 603
Target Start/End: Complemental strand, 11483094 - 11482996
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| ||||||||||||| |||||| |||||||| |  ||| |||||||||||| |||||| |||| ||  |||| |||||||  || ||||||||    
T  11483094 tttggtcccttaacttattttcagatttcattttggtcccttaactataaagtgtcttaatttgatctcttatgtcttttgtcgttatctcttttggtc 11482996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 46446378 - 46446444
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||||||||| |||||||   ||||||||||||| |  ||||||||||||||||||||| ||||    
T  46446378 tttggtctcttaatttattttcgaattttattttggtgccttaattataaagtgtctcaattcggtc 46446444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 567
Target Start/End: Original strand, 52292603 - 52292665
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 567  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||    
T  52292603 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaattt 52292665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 53342733 - 53342791
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  53342733 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 53342791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 567
Target Start/End: Complemental strand, 55015724 - 55015662
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 567  Q
    |||||| ||||||||||||||| ||||||| |||||| | |||||| |||| |||||||||||    
T  55015724 tttggtttcttaacttatttttggattttaatttggtcccctaattttaaactgtctcaattt 55015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 55443657 - 55443591
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  55443657 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 55443591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 669
Target Start/End: Original strand, 17345319 - 17345483
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||| |||||||||||||| | ||| |  ||||| | |||| || ||||| ||||||||||||  | |||||||||| ||  ||||  ||||||||    
T  17345319 atttggtcccttaacttatttttggttttcaggttggtcccctaactaaaaagtatctcaatttggttccttaaatcttct-tctgttacctttttggtc 17345417  T
Q  604 atcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 669  Q
     ||| ||||| ||||||||||| || || | || |||| |||| ||||| | ||||||| ||||||    
T  17345418 ctctccgttagttttttaatgtctaatatttttaatatgatttgaaccattcgattgcatgtctat 17345483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 573
Target Start/End: Complemental strand, 2225131 - 2225063
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    ||||||| |||||||||||||| ||||| | |||||| | |||| | |||| |||||||||||||||||    
T  2225131 tttggtcccttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtctc 2225063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 625
Target Start/End: Complemental strand, 19623018 - 19622906
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| | ||| | ||||||   |||| |||||||||||||||  ||||| | ||  ||||||||||||  ||||||||||||||   |||    
T  19623018 cttaacttattttttgttttcactttggtctcctaactataaagtgtctcaaactggtcccttatgtcttctgtcgttatctattttggtcatcgcagtt 19622919  T
Q  613 aattttttaatgt 625  Q
    |||||||| ||||    
T  19622918 aattttttgatgt 19622906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 30431384 - 30431456
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||||| |||| ||||||||||||||| |||||    
T  30431384 tttggtcccttaacttatttttgaatttcattttggtcccttaattttaaactgtctcaatttggtcccataa 30431456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 615 - 695
Target Start/End: Complemental strand, 45422162 - 45422082
Alignment:
Q  615 ttttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatcaacac 695  Q
    ||||||||||| || || ||||||||| || ||||||| |||||||||||||||| ||| | ||  |||||||| ||||||    
T  45422162 ttttttaatgtctaatattcttgatatgatattaaccatttgattgcaggtctattgtatcaaaccgtgaaccaccaacac 45422082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 605
Target Start/End: Original strand, 21127983 - 21128034
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 605  Q
    |||||| ||||||||||| ||||| ||||||| ||||||| |||||||||||    
T  21127983 aagtgtgtcaatttggtcccataactcttctgccgtttaccattttggtcat 21128034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 577
Target Start/End: Complemental strand, 30838588 - 30838505
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    ||||| ||| |||||||| ||||||||||||||  ||||||||||||| |  ||| | |||| | ||||||||||||| |||||    
T  30838588 ttaatatatgatttggtcccttaacttatttttgaattttattttggtcccttaactttaaactatctcaatttggtcccataa 30838505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 599
Target Start/End: Complemental strand, 48254995 - 48254902
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||| || |||||||||||||| | ||||||||| | ||| | | ||||||||||||| |||||||| ||||| ||||||| ||||||| |||||    
T  48254995 atttgatcccttaacttattttttgtttttatttt-gatctttgactataaagtgtctc-atttggtcacataactcttctgccgtttaccatttt 48254902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 571
Target Start/End: Complemental strand, 52705404 - 52705349
Alignment:
Q  516 aacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  52705404 aacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 52705349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 568
Target Start/End: Original strand, 55442611 - 55442666
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 568  Q
    ||||||||||||| | |||| |||||||| | |||| |||||||||||||||||||    
T  55442611 cttaacttattttcaaatttcattttggtcccctaactataaagtgtctcaatttg 55442666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 609 - 691
Target Start/End: Complemental strand, 143178 - 143096
Alignment:
Q  609 cgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctatggtaactaagagtgaaccatca 691  Q
    |||||||||||||||||||| ||    |||| | |||||||||||||||||||||||  || ||| |||| |||| |||||||    
T  143178 cgttaattttttaatgtataatatgtatgatgtgattttaaccacttgattgcaggttcattgtatctaatagtgcaccatca 143096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 563
Target Start/End: Complemental strand, 5417155 - 5417097
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctca 563  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| ||||||||||||||    
T  5417155 tttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctca 5417097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 619
Target Start/End: Complemental strand, 35174481 - 35174375
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||    ||| |||||||| |  ||| ||| |||||| ||||  ||||| ||||| |||||| |||||||||||||||||||| |  |||    
T  35174481 cttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcccataactcttctatcgtttactattttggtcatttctgtt 35174382  T
Q  613 aattttt 619  Q
    |||||||    
T  35174381 aattttt 35174375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 47765444 - 47765561
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||| || ||||||||||||||||  | ||| | |||||| | |||| ||||||||||||||| ||| || | || |||||| || ||||| | |||||    
T  47765444 atcatctgctctcttaacttattttccgttttcactttggtcc-ctaactataaagtgtctcaaattgatcccttatatcttccgttgtttattgttttg 47765542  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||||||| ||||| |||||    
T  47765543 gtcatctccgttagttttt 47765561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 555
Target Start/End: Original strand, 47854519 - 47854569
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaa 555  Q
    ||||||| ||||| |||||||| ||||| |||||||| |||||||||||||    
T  47854519 tttggtcccttaatttatttttggatttcattttggtcctctaattataaa 47854569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 603
Target Start/End: Original strand, 12060716 - 12060765
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||||||| ||||||| | || || |||||||||||||||||    
T  12060716 aagtgtctcaatttggcctcataactattttgccgtttactattttggtc 12060765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 12852895 - 12853003
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||| |||| ||||| |||||||| | |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  12852895 tttggtcccttaacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatcttctatcgtttactattttggtca 12852994  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  12852995 tctccgtta 12853003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 505 - 666
Target Start/End: Original strand, 6706935 - 6707096
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| ||||| |||||||| | |||| |||||||||||||||||||||  ||||||||||||  |||||||||||||||||     
T  6706935 tttggtcccttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggttccataaatcttcttccgtttactattttggtcc 6707034  T
Q  605 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
     || ||||| |||||||||||  | || |  |||||| |||| ||||| | |||||||||||    
T  6707035 cctccgttagttttttaatgtcaaatatttatgatataatttcaaccattagattgcaggtc 6707096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 561 - 699
Target Start/End: Original strand, 25569834 - 25569972
Alignment:
Q  561 tcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattg 660  Q
    ||||||||||| ||||| |||||   |||||| | |||||||  | |  |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  25569834 tcaatttggtcacataagtcttcctccgtttattgttttggttttttatgttagttttttaatgtatattattcttgatatcattttaaccacttgattg 25569933  T
Q  661 caggtctatggtaactaagagtgaaccatcaacacttga 699  Q
    || |||||| |||  |||||||||||||||| |||||||    
T  25569934 catgtctatagtatttaagagtgaaccatcagcacttga 25569972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 501 - 625
Target Start/End: Complemental strand, 23178993 - 23178869
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||||| ||| | |||||| | |||| |||||| ||| | || |||||| ||||||||||| |||||||| |||||||    
T  23178993 atcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttg 23178894  T
Q  601 gtcatcttcgttaattttttaatgt 625  Q
    ||||||| ||||| |||||||||||    
T  23178893 gtcatctccgttagttttttaatgt 23178869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 501 - 625
Target Start/End: Complemental strand, 23590250 - 23590126
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||||| ||| | |||||| | |||| |||||| ||| | || |||||| ||||||||||| |||||||| |||||||    
T  23590250 atcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataaatcttcagtcgtttattattttg 23590151  T
Q  601 gtcatcttcgttaattttttaatgt 625  Q
    ||||||| ||||| |||||||||||    
T  23590150 gtcatctccgttagttttttaatgt 23590126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 514 - 620
Target Start/End: Complemental strand, 6209162 - 6209057
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtta 613  Q
    ||||||||||||| ||||| ||||||||  ||||| |||||||||||| ||||||||| ||||| |||| |||||||||||||||||||| |||||||||    
T  6209162 ttaacttatttttggatttcattttggtcatctaactataaagtgtcttaatttggtcccataattctt-tgtcgtttactattttggtcttcttcgtta 6209064  T
Q  614 atttttt 620  Q
     ||||||    
T  6209063 gtttttt 6209057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 501 - 613
Target Start/End: Complemental strand, 42029069 - 42028957
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||| ||||||| | ||| ||||||||  ||||| ||||||||||||| |||||||| ||||| |||||||||| |||||||||||    
T  42029069 atcatttggtcccttaacgtatttttggttttcattttggtcatctaactataaagtgtctcgatttggtcccataattcttctgtcgcttactattttg 42028970  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  42028969 gtcttctccgtta 42028957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 513 - 620
Target Start/End: Complemental strand, 1625074 - 1624968
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| ||||| |||||| | |||||| ||||||||||||||||||||||  ||||||||| || | ||||||||||||||| ||| ||||    
T  1625074 cttaacttatttttggatttcattttgat-ctctaactataaagtgtctcaatttggtcctataaatcttatgccatttactattttggtcttctccgtt 1624976  T
Q  613 aatttttt 620  Q
    ||||||||    
T  1624975 aatttttt 1624968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 23177678 - 23177797
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||| ||||| |||||||| | ||| |||||||| | | ||| |||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  23177678 atcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccatttt 23177777  T
Q  600 ggtcatcttcgttaattttt 619  Q
    |||| ||| ||||| |||||    
T  23177778 ggtcctctccgttagttttt 23177797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 23588935 - 23589054
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    ||||||||||| ||||| |||||||| | ||| |||||||| | | ||| |||||||||||||||||||||| ||||||||||||| ||||||| |||||    
T  23588935 atcatttggtcccttaatttatttttggttttcattttggtccccctaactataaagtgtctcaatttggtcccataaatcttctgccgtttaccatttt 23589034  T
Q  600 ggtcatcttcgttaattttt 619  Q
    |||| ||| ||||| |||||    
T  23589035 ggtcctctccgttagttttt 23589054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 491 - 613
Target Start/End: Original strand, 15650436 - 15650558
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtt 590  Q
    ||||||||  ||| |||| || ||||||||||||||   | ||| |||||| | |||| ||||||||||||||||||||| || |||||||| |||||||    
T  15650436 ggtttaatacatcgtttgatcccttaacttatttttcattgttaatttggtcccctaactataaagtgtctcaatttggtatcttaaatcttatgtcgtt 15650535  T
Q  591 tactattttggtcatcttcgtta 613  Q
    ||||||||||||||||| |||||    
T  15650536 tactattttggtcatctccgtta 15650558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 505 - 585
Target Start/End: Complemental strand, 12854211 - 12854131
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctg 585  Q
    ||||||| |||||||||||||||||||| |||||||| |  ||| |||||||||||||||||||||| |||||||||||||    
T  12854211 tttggtcccttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatcttctg 12854131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 555 - 666
Target Start/End: Complemental strand, 40174821 - 40174711
Alignment:
Q  555 agtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccact 654  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| || || | || |||| |||| ||||| |    
T  40174821 agtgtttcaatttggtcccataaatcttctgttgtttactattttggtcatctccgttagttttttaatgt-taatattttttatatgatttcaaccatt 40174723  T
Q  655 tgattgcaggtc 666  Q
     |||||||||||    
T  40174722 cgattgcaggtc 40174711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 518 - 628
Target Start/End: Complemental strand, 21012174 - 21012064
Alignment:
Q  518 cttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattt 617  Q
    ||||||||| | ||| |||||| | | |||| |||||||||| ||||||||||| |  |||||||| ||||||||||||||||||||||| ||||| |||    
T  21012174 cttattttttgttttcattttgatcccctaactataaagtgtttcaatttggtccctcaaatcttccgtcgtttactattttggtcatctccgttagttt 21012075  T
Q  618 tttaatgtata 628  Q
    || ||||||||    
T  21012074 ttgaatgtata 21012064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 494 - 625
Target Start/End: Original strand, 12958415 - 12958545
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| ||||||||||| ||||||||||||||| | ||||| |||| | | |||| |||||||||||||||||||||| ||||||| ||||  | ||||     
T  12958415 ttaatatatcatttggt-tcttaacttatttttggtttttaatttgatcccctaactataaagtgtctcaatttggtcccataaattttcttccatttat 12958513  T
Q  594 tattttggtcatcttcgttaattttttaatgt 625  Q
     ||||||||||| | ||||  |||||||||||    
T  12958514 cattttggtcatttccgtttgttttttaatgt 12958545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 7036971 - 7037089
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||  ||||||||||||| ||||| | ||| || |  ||| |||||||||| ||||||||||| ||||| ||||||| ||||||| ||||||    
T  7036971 atcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataagtcttctgccgtttaccattttg 7037070  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||||| | |||| ||||||    
T  7037071 gtcatttccgtttattttt 7037089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 505 - 573
Target Start/End: Original strand, 10477351 - 10477419
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggt-tctctaattataaagtgtctcaatttggtctc 573  Q
    |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||    
T  10477351 tttggtctcttaacttatttttggatttcattttggtctct-taattataaagtgtctcaatttggtctc 10477419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 550 - 619
Target Start/End: Original strand, 14509263 - 14509332
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||||||| | |||| |||| ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  14509263 tataaagtgttttaattcggtcccataaatcttctgtcgtttactattttggtcctctccgttaattttt 14509332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 494 - 603
Target Start/End: Original strand, 34039261 - 34039370
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| |||||||| || |||||||||||||||   ||  |||||| |||||||| |||||||| ||| ||||||||||||||| ||||| |||| || |    
T  34039261 ttaatatatcatttagtttcttaacttattttttatttccattttgcttctctaactataaagtatcttaatttggtctcataattcttcggtcgcttgc 34039360  T
Q  594 tattttggtc 603  Q
    ||||||||||    
T  34039361 tattttggtc 34039370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 577
Target Start/End: Complemental strand, 7038443 - 7038367
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    ||||||||||| |||||||||||||| ||||| |||||||| |  ||| |||||||||||||||||||||| |||||    
T  7038443 atcatttggtcccttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 625
Target Start/End: Original strand, 37867761 - 37867885
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||| | | |||| |||||||||||||||||||||| || |||| |||| |||||||  ||||||    
T  37867761 atcatttggtcccttaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccacaaattttctttcgtttatcattttg 37867860  T
Q  601 gtcatcttcgttaattttttaatgt 625  Q
    ||||| |  |||  |||||||||||    
T  37867861 gtcatgtctgtttgttttttaatgt 37867885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 612
Target Start/End: Complemental strand, 37869147 - 37869040
Alignment:
Q  505 tttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| |||||||||||||| |||||| | |||||| |  ||| |||||||||||||||||| ||||||||| |||||||||||||||  ||||||||    
T  37869147 tttggtcccttaacttattttt-gattttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtc 37869049  T
Q  604 atcttcgtt 612  Q
     ||| ||||    
T  37869048 ttctccgtt 37869040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 603
Target Start/End: Original strand, 42027202 - 42027300
Alignment:
Q  505 tttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| |||||||||||||| |||||| |||||||| |||||| || ||| ||||||||||||||| ||||||| |||||  |||||||| |||||||    
T  42027202 tttggtcccttaacttattttt-gattttcattttggtcctctaactacaaaatgtctcaatttggtcccataaattttctgctgtttactactttggtc 42027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 620
Target Start/End: Original strand, 42246600 - 42246715
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||| ||||| | ||| |||||| | | ||||||||||||||| |||||||| || ||||| |||| |  |||||||||||||||||     
T  42246600 tttggtcccttaacttgtttttggttttcattttgatcccctaattataaagtgtttcaatttgatcccataactcttttaccgtttactattttggtcc 42246699  T
Q  605 tcttcgttaatttttt 620  Q
    | ||||||| ||||||    
T  42246700 ttttcgttagtttttt 42246715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 3254865 - 3254931
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||||| ||||||||| |||||||||||||||||    
T  3254865 tttggtcccttaacttattttcggatttcattttggttccctaattatagagtgtctcaatttggtc 3254931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 603
Target Start/End: Original strand, 4829482 - 4829572
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||||||||||| | ||| | ||| || |  ||| |||||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4829482 cttaacttatttttcgttttcactttagtcccttaactataaaatgtctcaatttgatctcataaatcttatgtcgtttactattttggtc 4829572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 505 - 567
Target Start/End: Complemental strand, 33837862 - 33837800
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaattt 567  Q
    ||||||| ||||||||||||| ||||||||||||||| | |||| ||||||||||||||||||    
T  33837862 tttggtcccttaacttattttcagattttattttggtcccctaactataaagtgtctcaattt 33837800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 501 - 613
Target Start/End: Original strand, 2581808 - 2581920
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||||   |||||||||||| | ||| | |||| | | |||| |||||||||||||||||||||| ||||||||||  | |||||||||| |||    
T  2581808 atcatttggtcctctaacttatttttggttttcaatttgatcccctaactataaagtgtctcaatttggtcccataaatcttacgccgtttactatcttg 2581907  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  2581908 gtcctctccgtta 2581920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 513 - 573
Target Start/End: Complemental strand, 4630183 - 4630123
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    ||||||||||||| |||||| |||||||| | |||| ||||||||||||||||||||||||    
T  4630183 cttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtctc 4630123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 554 - 614
Target Start/End: Complemental strand, 14510567 - 14510507
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 614  Q
    ||||||||||||||||||  |||| ||||||| ||||||||||||| ||||||||||||||    
T  14510567 aagtgtctcaatttggtcctataactcttctgccgtttactattttagtcatcttcgttaa 14510507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 515 - 582
Target Start/End: Complemental strand, 2583643 - 2583576
Alignment:
Q  515 taacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatctt 582  Q
    |||||||||||| | ||||| ||| || | |||| |||||||||||||||||||||||||||||||||    
T  2583643 taacttatttttggtttttaattttgtcccctaactataaagtgtctcaatttggtctcataaatctt 2583576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 554 - 625
Target Start/End: Complemental strand, 3533684 - 3533613
Alignment:
Q  554 aagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgt 625  Q
    |||||| |||||||||||||||||||||| ||||||||||||||| | |||| | ||||| | |||||||||    
T  3533684 aagtgtgtcaatttggtctcataaatcttttgtcgtttactatttcgatcatttccgttagtattttaatgt 3533613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 536 - 603
Target Start/End: Complemental strand, 7490271 - 7490204
Alignment:
Q  536 tttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    |||||| || |||||||||| ||||||||||||||| |||||||||| | | ||||||||||||||||    
T  7490271 tttggtcctttaattataaaatgtctcaatttggtcccataaatcttttattgtttactattttggtc 7490204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 5564068 - 5564134
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||||||||||||||||||||||||||    
T  5564068 tttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtc 5564134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 5565252 - 5565186
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||||  |||| |||||||| |  ||||||||||||||||||||||||||    
T  5565252 tttggtcccttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggtc 5565186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 494 - 619
Target Start/End: Complemental strand, 28109987 - 28109862
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctc-taattataaagtgtctcaatttggtctcataaatcttctgtcgttta 592  Q
    ||||| ||| |||||||| |||||||||||||| | ||| | |||||| ||| |||  ||||||| ||||||||||||| ||||| | |||||| |||||    
T  28109987 ttaatatatgatttggtcccttaacttatttttcgttttcaatttggt-ctcataacgataaagtatctcaatttggtcccataacttttctgtagttta 28109889  T
Q  593 ctattttggtcatcttcgttaattttt 619  Q
    | ||||||||| ||| ||||| |||||    
T  28109888 ccattttggtcctctccgttatttttt 28109862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 623
Target Start/End: Complemental strand, 10368506 - 10368374
Alignment:
Q  491 ggtttaatgtatcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgt 589  Q
    ||||||||  ||||||||||| ||||| |||||||| |||||| | |||| | | |||| ||||||||||||||||||| || ||||||| ||||  |||    
T  10368506 ggtttaatacatcatttggtcccttaatttattttt-gattttcaatttgatcccctaactataaagtgtctcaatttgatcccataaattttcttccgt 10368408  T
Q  590 ttactattttggtcatcttcgttaattttttaat 623  Q
    |||  ||||||||||| | ||||  |||||||||    
T  10368407 ttatcattttggtcatgtccgtttgttttttaat 10368374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 42368415 - 42368343
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    |||||||| |||||||||||||| ||||| |||||||| | |||| ||||||||||||| |||||||| |||||    
T  42368415 atttggtc-cttaacttatttttggatttcattttggtcccctaactataaagtgtctcgatttggtcccataa 42368343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 613
Target Start/End: Original strand, 2305557 - 2305657
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| ||||| |||||| | | |||| |||||||||||||||||||||| | ||  ||||||| ||||  || |||||||| ||| ||||    
T  2305557 cttaacttatttttggatttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctccgtt 2305656  T
Q  613 a 613  Q
    |    
T  2305657 a 2305657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 605
Target Start/End: Original strand, 4628899 - 4628991
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcat 605  Q
    |||||||||||||| |||||||||||||| |||||  |||||||| |||||||||| || ||||  |||| || ||||  || ||||||||||    
T  4628899 cttaacttatttttggattttattttggtcctctatatataaagtatctcaatttgatcccatatgtcttttgccgttacctcttttggtcat 4628991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 602
Target Start/End: Original strand, 11386642 - 11386730
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggt 602  Q
    ||||||||||||||| ||||| |||||| |  ||| |||||||||| |||||||| || |||||| |||||  ||||||| ||||||||    
T  11386642 ttaacttatttttagtttttaatttggtcccttaactataaagtgtttcaatttgatcccataaaccttctaccgtttaccattttggt 11386730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 504 - 571
Target Start/End: Complemental strand, 3666376 - 3666309
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||| |||||||||||||  ||||| |||||||| |  ||| ||||||||||||||||||||||    
T  3666376 atttggtcccttaacttattttcggatttcattttggtcccataactataaagtgtctcaatttggtc 3666309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 3665233 - 3665299
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| |||||| |||||| ||| |||||||||||    
T  3665233 tttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtc 3665299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 15268390 - 15268456
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||||||||||| ||||| |||||| | |  ||| |||||| |||||||||||||||    
T  15268390 tttggtctcttaacttatttttggatttgattttgatcccttaactataaaatgtctcaatttggtc 15268456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 603
Target Start/End: Complemental strand, 29424719 - 29424621
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtc 603  Q
    ||||||| |||||||||||||| | |||||  ||||| | |||| |||||||||| ||||||||||| | | ||| ||||| |||||| | ||||||||    
T  29424719 tttggtcccttaacttatttttggtttttacattggtcccctaactataaagtgtttcaatttggtcccttgaatattctgccgtttattgttttggtc 29424621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 33836786 - 33836844
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||||||||  ||||| |||||||| | |||| ||||||||||||||||||||||    
T  33836786 cttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtc 33836844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 607
Target Start/End: Original strand, 3532244 - 3532305
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatct 607  Q
    ||||||| |||||| ||||||||||| ||||| |||| |||| ||||||||||| |||||||    
T  3532244 taattattaagtgtgtcaatttggtcacataagtcttttgtcatttactattttagtcatct 3532305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 593
Target Start/End: Original strand, 10367256 - 10367336
Alignment:
Q  513 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    |||||||||||||| |||||| | |||||||   ||| |||||||||||||||||| ||||||||| ||||||| |||||||    
T  10367256 cttaacttattttt-gattttcaatttggtttcttaactataaagtgtctcaatttagtctcataagtcttctgccgtttac 10367336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 573
Target Start/End: Complemental strand, 3255977 - 3255917
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    |||||||||||||  ||||| |||||||| | |||| |||||||||| |||||||||||||    
T  3255977 cttaacttattttcggatttcattttggtcccctaactataaagtgtttcaatttggtctc 3255917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 27264680 - 27264608
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    ||||||||||||||||||||||  |||| |||||||| |  ||| | |||| ||||||||||||||| |||||    
T  27264680 tttggtctcttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataa 27264608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 577
Target Start/End: Original strand, 35799529 - 35799593
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    |||||||||||||| | ||| | ||| || | |||| ||||||||||||||||||||||||||||    
T  35799529 cttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtctcataa 35799593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 573
Target Start/End: Original strand, 41312509 - 41312577
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctc 573  Q
    |||||||  ||||||||||||  ||||| |||||| | |||||| |||||||| |||||||||||||||    
T  41312509 tttggtccattaacttattttcggatttcattttgttcctctaactataaagtatctcaatttggtctc 41312577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 593
Target Start/End: Complemental strand, 12959823 - 12959724
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| |||| ||||||  ||||||||||||||   ||||| |||||| |  |||  ||||||||||||||||| |||  |||||||||||| |||||||    
T  12959823 ttaatatatcgtttggttccttaacttatttttgatttttaatttggtcccttaacaataaagtgtctcaatttagtccgataaatcttctgccgtttac 12959724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 505 - 568
Target Start/End: Complemental strand, 41313374 - 41313311
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 568  Q
    ||||||| |||||||||||||   ||||||||||||| | |||| |||||||||||| ||||||    
T  41313374 tttggtcccttaacttattttcgaattttattttggtcccctaactataaagtgtctgaatttg 41313311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 501 - 571
Target Start/End: Complemental strand, 41796063 - 41795993
Alignment:
Q  501 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||| |||||||||||||| |||||| |||||| | | |||| ||||||||||||||||||||||    
T  41796063 atcatttagtcccttaacttattttt-gattttcattttgatcccctaactataaagtgtctcaatttggtc 41795993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 2306767 - 2306702
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||  ||||| |||||||| | |||| | ||||||||||||||||||||    
T  2306767 tttggtcccttaacttattttg-gatttcattttggtcccctaactgtaaagtgtctcaatttggtc 2306702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 14482198 - 14482132
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||||  |||| ||||||||||  ||| | ||||| ||||||||||||||    
T  14482198 tttggtcccttaacttatttttgaatttcattttggttccttaactttaaagcgtctcaatttggtc 14482132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 17179069 - 17179135
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||||||||||||||  |||||| |||||| | |||| | |||| |||||||||||||||    
T  17179069 tttggtcccttaacttatttttgaattttaatttggtcccctaactttaaactgtctcaatttggtc 17179135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 494 - 564
Target Start/End: Complemental strand, 21010612 - 21010542
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaa 564  Q
    ||||| ||||||||| || |||||||||||||| | ||||||||| ||   |||| |||||||||||||||    
T  21010612 ttaatatatcatttgatcccttaacttattttttgtttttattttagtctcctaactataaagtgtctcaa 21010542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 550 - 620
Target Start/End: Complemental strand, 35801107 - 35801037
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaatttttt 620  Q
    |||||||||| ||||||||||| | ||| ||||||| | ||||| | ||||||| ||| ||||||||||||    
T  35801107 tataaagtgtttcaatttggtcccctaactcttctgccatttaccactttggtcctctccgttaatttttt 35801037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 566
Target Start/End: Complemental strand, 14573915 - 14573854
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatt 566  Q
    ||||||| |||||| ||||||| ||||| |||||||| | |||| ||||||||||| |||||    
T  14573915 tttggtcccttaacatatttttggatttcattttggtcccctaactataaagtgtcacaatt 14573854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 619
Target Start/End: Complemental strand, 15850721 - 15850652
Alignment:
Q  550 tataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttt 619  Q
    |||||| ||| ||||||||||||||||| |||||||  |||  |||||||||||  |||||||| |||||    
T  15850721 tataaaatgtttcaatttggtctcataactcttctgctgttacctattttggtccacttcgttagttttt 15850652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 501 - 625
Target Start/End: Original strand, 22133 - 22256
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||| || |||| ||||||||| ||||||   || | ||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||||    
T  22133 atcatttgatcccttaccttattttt-gattttcactttgatctctaactataaaatgtctcaatttgttcacataaatcttctgtcgtttactattttg 22231  T
Q  601 gtcatcttcgttaattttttaatgt 625  Q
    ||||||| |||||||||||||||||    
T  22232 gtcatctccgttaattttttaatgt 22256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 504 - 583
Target Start/End: Complemental strand, 40009 - 39930
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 583  Q
    ||||||||||||||||||||||| ||||| | |||||| | |||| |||||||||||||||||||||| |||||||||||    
T  40009 atttggtctcttaacttatttttggatttcactttggtcccctaagtataaagtgtctcaatttggtcccataaatcttc 39930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 494 - 607
Target Start/End: Original strand, 12908 - 13021
Alignment:
Q  494 ttaatgtatcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttac 593  Q
    ||||| ||| |||||||||||||||||||||||   ||||| |||||| |  |||||||||||||||||||||||||||||||||| || |||||||||     
T  12908 ttaatatattatttggtctcttaacttatttttgatttttactttggtcccataattataaagtgtctcaatttggtctcataaatattttgtcgtttag 13007  T
Q  594 tattttggtcatct 607  Q
    ||||||||| ||||    
T  13008 tattttggtaatct 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 501 - 619
Target Start/End: Complemental strand, 739 - 621
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | | | | |||||| | |||| |||||||||||||||||| ||| ||||||||||||| ||||||| ||||||    
T  739 atcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttg 640  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||||||| ||||| |||||    
T  639 gtcatctccgttagttttt 621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 501 - 619
Target Start/End: Original strand, 535 - 653
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | | | | |||||| | |||| |||||||||||||||||| ||| ||||||||||||| ||||||| ||||||    
T  535 atcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttg 634  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||||||| ||||| |||||    
T  635 gtcatctccgttagttttt 653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 501 - 619
Target Start/End: Complemental strand, 9589 - 9471
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | | | | |||||| | |||| |||||||||||||||||| ||| ||||||||||||| ||||||| ||||||    
T  9589 atcatttggtcccttaacttattttttgttatcactttggtcccctaactataaagtgtctcaatttagtcccataaatcttctgccgtttaccattttg 9490  T
Q  601 gtcatcttcgttaattttt 619  Q
    ||||||| ||||| |||||    
T  9489 gtcatctccgttagttttt 9471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 501 - 666
Target Start/End: Original strand, 8384 - 8549
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||||||| |||||||||||||| | ||| | |||| | | |||| |||||| |||||||| |||||| ||||||||||| ||| |||||||||| |    
T  8384 atcatttggtcccttaacttatttttggttttcactttgctcccctaactataaactgtctcaaattggtcccataaatcttcagtcatttactatttcg 8483  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtc 666  Q
    ||||||| ||||| ||||||||||| ||  | |  |||||| |||| ||||| | |||||||||||    
T  8484 gtcatctccgttagttttttaatgtgtaacatttctgatataatttcaaccattcgattgcaggtc 8549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 501 - 594
Target Start/End: Complemental strand, 56811 - 56718
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttact 594  Q
    ||||||||||| |||||||||||||| ||||| | |||||| | |||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  56811 atcatttggtcccttaacttattttttgatttcactttggtcccctaattataaagtgtctcaatttggtcctataaatcttctgccgtttact 56718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 501 - 583
Target Start/End: Original strand, 54596 - 54678
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttc 583  Q
    ||||||||| | |||||| || |||| | |||||||||||| || |||||||||||||||||||||||||| |||||||||||    
T  54596 atcatttggccccttaacgtaattttggtttttattttggtcctttaattataaagtgtctcaatttggtcccataaatcttc 54678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 620
Target Start/End: Complemental strand, 2372 - 2257
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||| | ||| |||||||| | ||||||||||||||| ||||||||||| ||||| ||||||   ||||||||||||||||     
T  2372 tttggtcccttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataactcttctactgtttactattttggtcc 2273  T
Q  605 tcttcgttaatttttt 620  Q
    | | ||||| ||||||    
T  2272 tttccgttagtttttt 2257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 513 - 619
Target Start/End: Original strand, 1229 - 1334
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgtt 612  Q
    |||||||||||||| | ||| |||||||| | ||||||||||||| |||||||||||||  ||||  |||||  ||||||| ||| ||||| ||| ||||    
T  1229 cttaacttatttttgg-tttcattttggtcccctaattataaagtctctcaatttggtcatataacccttctaccgtttacaattgtggtcctctccgtt 1327  T
Q  613 aattttt 619  Q
    | |||||    
T  1328 atttttt 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 501 - 613
Target Start/End: Complemental strand, 626 - 514
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||| ||  ||||||||||||| | ||| | || ||| | |||| ||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  626 atcatttgatccattaacttatttttggttttcaattaggtcccctaactataaagtgtctcaatttggtgtcataaatcttatgccgtttactattttg 527  T
Q  601 gtcatcttcgtta 613  Q
    ||| ||| |||||    
T  526 gtcctctccgtta 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 613
Target Start/End: Original strand, 1764 - 1872
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| |||||||||||||  ||||| |||||||| | ||||||||||||||||||||||||||| | ||  ||||||||||||  || ||||||||     
T  1764 tttggtcccttaacttattttcggatttcattttggtcccctaattataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcc 1863  T
Q  605 tcttcgtta 613  Q
    ||| |||||    
T  1864 tctccgtta 1872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 572
Target Start/End: Original strand, 5178 - 5245
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtct 572  Q
    ||||||| |||||||||||||| |||||| ||||||| | |||| |||||||||||||||||||||||    
T  5178 tttggtcccttaacttatttttggattttcttttggtcccctaactataaagtgtctcaatttggtct 5245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 501 - 620
Target Start/End: Complemental strand, 145980 - 145861
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    |||||||||| |||||| |||||||| | ||| | |||  | | |||| |||||| ||||| |||||||||  ||||||||| || ||||||||||||||    
T  145980 atcatttggtttcttaatttatttttggttttcaatttaatcccctaactataaaatgtcttaatttggtccaataaatcttatgccgtttactattttg 145881  T
Q  601 gtcatcttcgttaatttttt 620  Q
    ||||||| ||||||| ||||    
T  145880 gtcatctccgttaatatttt 145861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 556 - 666
Target Start/End: Complemental strand, 42402 - 42292
Alignment:
Q  556 gtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccactt 655  Q
    |||| |||||||| || ||||||||||||||||||||||||||||||| |||  |||| | ||||||||| |||   | ||||||| |||| ||||  ||    
T  42402 gtgtatcaatttgatcccataaatcttctgtcgtttactattttggtcctctctgttagtattttaatgtttatattttttgatatgatttcaaccgttt 42303  T
Q  656 gattgcaggtc 666  Q
    |||||||||||    
T  42302 gattgcaggtc 42292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 501 - 615
Target Start/End: Complemental strand, 77292 - 77178
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| |||||||||||||||||| | ||| | ||||||   |||| ||||||| || ||||||||||| ||||||| ||||  |||||||| |||||    
T  77292 atcatttagtctcttaacttattttttgttttcactttggtctcctaactataaagcgtttcaatttggtcccataaatattctaccgtttactgttttg 77193  T
Q  601 gtcatcttcgttaat 615  Q
    ||| ||| |||||||    
T  77192 gtcttctccgttaat 77178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 513 - 564
Target Start/End: Original strand, 75762 - 75813
Alignment:
Q  513 cttaacttatttttagattttattttggttctctaattataaagtgtctcaa 564  Q
    ||||| |||||||| | ||||| |||||| ||||||||||||||||||||||    
T  75762 cttaatttattttttgtttttactttggtcctctaattataaagtgtctcaa 75813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 505 - 625
Target Start/End: Complemental strand, 24922 - 24802
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||| |||||||| | ||| | |||||| | ||||||||||||||| ||||||||||| | ||  |||||   ||||  ||||||||||||    
T  24922 tttggtcccttaatttatttttggttttcagtttggtcccctaattataaagtgtttcaatttggtcccttatgtcttcctccgttacctattttggtca 24823  T
Q  605 tcttcgttaattttttaatgt 625  Q
    ||| ||||| |||||||||||    
T  24822 tctccgttagttttttaatgt 24802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 501 - 584
Target Start/End: Original strand, 23411 - 23494
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttct 584  Q
    ||||| ||||| |||||||||||||| | ||| | |||||| | |||| |||||| ||||||||||||||| ||||| ||||||    
T  23411 atcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcccataactcttct 23494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 501 - 669
Target Start/End: Complemental strand, 73097 - 72929
Alignment:
Q  501 atcatttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttg 600  Q
    ||||||| ||| |||||||||||||| | ||| | |||||| | ||||  |||||||||| ||| |||||||| ||  ||||||||||||  || |||||    
T  73097 atcatttagtcccttaacttatttttggttttcactttggtcccctaacaataaagtgtcacaaattggtctcttatgtcttctgtcgttacctcttttg 72998  T
Q  601 gtcatcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgcaggtctat 669  Q
    ||| ||| ||||| |||||| |  |||| || | || |||| ||| |||||  ||||||||||||||||    
T  72997 gtcctctccgttagtttttttaattataatatttttaatatgattataaccgtttgattgcaggtctat 72929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 505 - 662
Target Start/End: Original strand, 11715 - 11872
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtca 604  Q
    ||||||| ||||||||||||||   ||| | ||| || | ||||||||||||||| ||||||||||| | ||  ||||||   |||  |||||||||||     
T  11715 tttggtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtcccttatgtcttctccagttacctattttggtcc 11814  T
Q  605 tcttcgttaattttttaatgtatattaatcttgatatcattttaaccacttgattgca 662  Q
    ||| ||||| ||||||||||| || || | ||||| | |||||||||| | |||||||    
T  11815 tctccgttagttttttaatgtctaatatttttgatgtgattttaaccattcgattgca 11872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 501 - 605
Target Start/End: Original strand, 96165 - 96269
Alignment:
Q  501 atcatttggtctcttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggtctcataaatcttctgtcgtttactatttt 599  Q
    |||||||||||  ||||||||||||  |||||| | |||||| | |||| ||||||||||||||||||| ||  |||||||||||  ||||||| |||||    
T  96165 atcatttggtccattaacttattttc-gattttcaatttggtcccctaactataaagtgtctcaatttgatccgataaatcttcttccgtttaccatttt 96263  T
Q  600 ggtcat 605  Q
    ||||||    
T  96264 ggtcat 96269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 25931 - 25997
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||||||||||   |||| |||||||| | |||| ||||||||||||||||||||||    
T  25931 tttggtcccttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggtc 25997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 514 - 568
Target Start/End: Complemental strand, 27014 - 26960
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttg 568  Q
    ||||||||||||  ||||| |||||||| | |||| |||||||||||||||||||    
T  27014 ttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttg 26960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1827 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 514 - 571
Target Start/End: Complemental strand, 1156 - 1100
Alignment:
Q  514 ttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||||||||  |||||||||| ||| |||||| ||||||||||||||||||||||    
T  1156 ttaacttattttcggattttattt-ggtcctctaactataaagtgtctcaatttggtc 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 4284 - 4216
Alignment:
Q  546 taattataaagtgtctcaatttggtctcataaatcttctgtcgtttactattttggtcatcttcgttaa 614  Q
    ||||||| ||||||||||||||| |||||||| || |||| ||||||| |||||| || ||| ||||||    
T  4284 taattattaagtgtctcaatttgatctcataactcgtctgccgtttaccattttgttcctctccgttaa 4216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 519 - 571
Target Start/End: Complemental strand, 458553 - 458501
Alignment:
Q  519 ttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    |||||||  |||||||||||||| | ||||||||||||||||| |||||||||    
T  458553 ttattttcggattttattttggtcccctaattataaagtgtcttaatttggtc 458501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 570
Target Start/End: Complemental strand, 6663 - 6606
Alignment:
Q  513 cttaacttatttttagatttt-attttggttctctaattataaagtgtctcaatttggt 570  Q
    ||||| |||||||| |||||| |||||||| ||||||||||||| ||||||||||||||    
T  6663 cttaaattattttt-gattttcattttggtcctctaattataaaatgtctcaatttggt 6606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 2019 - 2085
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| ||| |||||||||||||||| |||||||| |  ||| | |||| |||||||||||||||    
T  2019 tttggtcccttgacttatttttagatttcattttggtcccttaactttaaattgtctcaatttggtc 2085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 20689 - 20623
Alignment:
Q  505 tttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtc 571  Q
    ||||||| |||||| |||||||  |||||| |||||||| |||| | |||| |||||||||||||||    
T  20689 tttggtcccttaacatatttttgaattttaatttggttccctaactttaaactgtctcaatttggtc 20623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 233 - 160
Alignment:
Q  504 atttggtctcttaacttatttttagattttattttggttctctaattataaagtgtctcaatttggtctcataa 577  Q
    |||||||| ||||||||||||||| |||| |||||| | |  ||||| ||||  |||||||||||||| |||||    
T  233 atttggtcccttaacttatttttaaatttaattttgatcccttaattttaaaccgtctcaatttggtcgcataa 160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University