View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7794_low_17 (Length: 295)

Name: NF7794_low_17
Description: NF7794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7794_low_17
NF7794_low_17
[»] chr5 (25 HSPs)
chr5 (13-295)||(7133750-7134018)
chr5 (192-295)||(43117723-43117826)
chr5 (196-295)||(95410-95509)
chr5 (196-295)||(25258210-25258309)
chr5 (196-295)||(25322000-25322099)
chr5 (201-254)||(15590055-15590108)
chr5 (196-293)||(18333608-18333705)
chr5 (192-295)||(24270010-24270114)
chr5 (192-295)||(24346641-24346745)
chr5 (196-295)||(15480398-15480497)
chr5 (96-171)||(43117768-43117843)
chr5 (201-295)||(9368671-9368765)
chr5 (196-295)||(41666901-41667001)
chr5 (196-250)||(6919338-6919392)
chr5 (196-282)||(8081258-8081344)
chr5 (119-172)||(6919340-6919393)
chr5 (201-254)||(11896305-11896358)
chr5 (210-295)||(17150391-17150476)
chr5 (197-249)||(17143250-17143302)
chr5 (201-295)||(32908866-32908960)
chr5 (119-168)||(11896302-11896351)
chr5 (201-246)||(17016024-17016069)
chr5 (119-163)||(17016021-17016065)
chr5 (119-171)||(25258212-25258264)
chr5 (119-171)||(25322002-25322054)
[»] chr1 (21 HSPs)
chr1 (202-295)||(27413423-27413516)
chr1 (192-294)||(26173361-26173463)
chr1 (196-295)||(4112684-4112783)
chr1 (192-295)||(25145625-25145728)
chr1 (201-295)||(26176984-26177078)
chr1 (192-295)||(51460347-51460450)
chr1 (196-281)||(25713248-25713333)
chr1 (203-295)||(16163009-16163101)
chr1 (196-295)||(39348261-39348361)
chr1 (192-295)||(4112911-4113014)
chr1 (201-295)||(30369911-30370005)
chr1 (229-295)||(38733227-38733293)
chr1 (196-295)||(35772105-35772204)
chr1 (196-295)||(2859536-2859635)
chr1 (118-172)||(7307841-7307895)
chr1 (210-256)||(31496294-31496340)
chr1 (192-282)||(52961436-52961526)
chr1 (201-250)||(7307842-7307891)
chr1 (119-172)||(35772149-35772202)
chr1 (196-295)||(9146772-9146872)
chr1 (119-171)||(39348263-39348315)
[»] chr8 (34 HSPs)
chr8 (192-295)||(31197690-31197793)
chr8 (196-295)||(20301337-20301436)
chr8 (196-295)||(21087969-21088068)
chr8 (196-290)||(18004238-18004332)
chr8 (196-295)||(3157468-3157567)
chr8 (191-295)||(41790734-41790838)
chr8 (196-295)||(8084203-8084302)
chr8 (196-295)||(11232338-11232437)
chr8 (196-295)||(12688148-12688247)
chr8 (196-295)||(39052838-39052937)
chr8 (210-295)||(5932107-5932192)
chr8 (193-254)||(7669536-7669597)
chr8 (227-295)||(10615470-10615538)
chr8 (196-295)||(10614848-10614947)
chr8 (196-295)||(37868492-37868591)
chr8 (192-254)||(35682921-35682983)
chr8 (196-254)||(39960074-39960132)
chr8 (196-256)||(3157153-3157213)
chr8 (227-295)||(24532361-24532429)
chr8 (119-171)||(31197735-31197787)
chr8 (119-171)||(35682927-35682979)
chr8 (196-295)||(5675965-5676064)
chr8 (196-275)||(39052681-39052760)
chr8 (228-294)||(10615708-10615774)
chr8 (201-254)||(5675883-5675936)
chr8 (262-295)||(11232169-11232202)
chr8 (262-295)||(36917414-36917447)
chr8 (119-171)||(7669540-7669592)
chr8 (119-171)||(15042795-15042847)
chr8 (119-171)||(18004240-18004292)
chr8 (119-171)||(20301382-20301434)
chr8 (119-171)||(21088014-21088066)
chr8 (119-171)||(39052683-39052735)
chr8 (119-171)||(39052840-39052892)
[»] scaffold0692 (2 HSPs)
scaffold0692 (196-295)||(5663-5762)
scaffold0692 (119-171)||(5665-5717)
[»] chr7 (24 HSPs)
chr7 (196-295)||(36277135-36277234)
chr7 (196-295)||(21861370-21861469)
chr7 (196-295)||(25620212-25620311)
chr7 (229-295)||(28080740-28080806)
chr7 (196-295)||(1596669-1596768)
chr7 (196-295)||(18826397-18826496)
chr7 (196-295)||(33834267-33834366)
chr7 (202-295)||(29469681-29469774)
chr7 (196-292)||(31892231-31892327)
chr7 (196-295)||(4886405-4886504)
chr7 (196-295)||(22574677-22574776)
chr7 (196-295)||(33996223-33996319)
chr7 (232-295)||(9689045-9689108)
chr7 (196-295)||(48661464-48661563)
chr7 (196-254)||(2315170-2315228)
chr7 (196-250)||(3519869-3519923)
chr7 (225-291)||(10903165-10903231)
chr7 (196-250)||(20305415-20305469)
chr7 (119-160)||(17948367-17948408)
chr7 (119-172)||(20305414-20305467)
chr7 (119-168)||(36277137-36277186)
chr7 (210-295)||(36993231-36993316)
chr7 (119-171)||(3519871-3519923)
chr7 (119-171)||(31892273-31892325)
[»] chr2 (18 HSPs)
chr2 (196-295)||(2029845-2029944)
chr2 (192-295)||(16419343-16419446)
chr2 (196-295)||(14466319-14466418)
chr2 (196-295)||(40379353-40379452)
chr2 (201-290)||(34893506-34893595)
chr2 (119-171)||(2029890-2029942)
chr2 (196-295)||(5711583-5711683)
chr2 (196-295)||(24395939-24396038)
chr2 (196-295)||(33606198-33606297)
chr2 (201-295)||(15124697-15124791)
chr2 (210-295)||(42895323-42895409)
chr2 (202-295)||(93269-93362)
chr2 (196-293)||(17525243-17525339)
chr2 (201-293)||(16533390-16533482)
chr2 (119-170)||(33606200-33606251)
chr2 (201-295)||(17719476-17719570)
chr2 (196-282)||(18607153-18607239)
chr2 (230-295)||(21383612-21383678)
[»] scaffold0045 (1 HSPs)
scaffold0045 (193-295)||(41112-41214)
[»] chr4 (29 HSPs)
chr4 (196-295)||(50543474-50543575)
chr4 (196-295)||(28245670-28245769)
chr4 (196-295)||(22231217-22231316)
chr4 (196-295)||(40717350-40717449)
chr4 (228-295)||(30530103-30530170)
chr4 (196-295)||(35796886-35796985)
chr4 (196-254)||(5398619-5398677)
chr4 (210-295)||(4905659-4905744)
chr4 (119-168)||(42662587-42662636)
chr4 (227-295)||(34357970-34358038)
chr4 (229-295)||(6218280-6218346)
chr4 (196-282)||(27634225-27634311)
chr4 (227-292)||(9908771-9908836)
chr4 (119-171)||(5398621-5398673)
chr4 (119-163)||(40717352-40717396)
chr4 (232-295)||(13555422-13555485)
chr4 (211-254)||(25324193-25324236)
chr4 (196-295)||(35819037-35819136)
chr4 (196-250)||(5398354-5398408)
chr4 (201-291)||(35645314-35645404)
chr4 (201-291)||(35645603-35645693)
chr4 (208-254)||(36686062-36686108)
chr4 (119-172)||(5398356-5398409)
chr4 (230-295)||(7926404-7926469)
chr4 (210-295)||(31944999-31945083)
chr4 (117-170)||(31945044-31945097)
chr4 (118-171)||(33107992-33108045)
chr4 (119-171)||(28245672-28245724)
chr4 (119-171)||(35788781-35788833)
[»] chr6 (23 HSPs)
chr6 (196-295)||(13353277-13353376)
chr6 (196-295)||(33796402-33796501)
chr6 (196-295)||(12330088-12330187)
chr6 (193-295)||(7638754-7638856)
chr6 (196-295)||(4868721-4868821)
chr6 (201-293)||(6237621-6237713)
chr6 (196-295)||(6400764-6400862)
chr6 (192-295)||(33631710-33631813)
chr6 (126-171)||(2736319-2736364)
chr6 (230-295)||(3921634-3921699)
chr6 (230-295)||(6054245-6054310)
chr6 (211-292)||(28648872-28648953)
chr6 (119-171)||(7638759-7638811)
chr6 (192-254)||(24554233-24554295)
chr6 (228-286)||(31961028-31961086)
chr6 (117-171)||(34345518-34345572)
chr6 (118-163)||(6237617-6237662)
chr6 (204-295)||(2736318-2736410)
chr6 (227-295)||(3680088-3680156)
chr6 (119-171)||(3680133-3680185)
chr6 (119-171)||(6400766-6400818)
chr6 (119-171)||(17147806-17147858)
chr6 (119-171)||(24554237-24554289)
[»] scaffold0519 (1 HSPs)
scaffold0519 (196-295)||(1992-2091)
[»] chr3 (15 HSPs)
chr3 (196-293)||(35038338-35038434)
chr3 (192-295)||(16239667-16239771)
chr3 (201-295)||(20303299-20303393)
chr3 (205-295)||(45828095-45828185)
chr3 (201-253)||(20303213-20303265)
chr3 (231-295)||(54567968-54568032)
chr3 (196-295)||(20327758-20327857)
chr3 (210-253)||(21809063-21809106)
chr3 (196-282)||(19954361-19954447)
chr3 (196-290)||(34992687-34992781)
chr3 (119-172)||(19954363-19954416)
chr3 (201-286)||(39269159-39269244)
chr3 (119-171)||(20303210-20303262)
chr3 (127-171)||(21809059-21809103)
chr3 (211-251)||(21888525-21888565)
[»] scaffold0400 (1 HSPs)
scaffold0400 (227-295)||(3921-3989)
[»] scaffold0365 (1 HSPs)
scaffold0365 (227-295)||(4565-4633)
[»] scaffold0092 (1 HSPs)
scaffold0092 (196-295)||(5731-5830)
[»] scaffold0129 (1 HSPs)
scaffold0129 (202-294)||(14380-14472)
[»] scaffold0048 (1 HSPs)
scaffold0048 (262-295)||(81918-81951)


Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 13 - 295
Target Start/End: Original strand, 7133750 - 7134018
Alignment:
Q  13 aatatgatatgaagctatcaatcacacctgtaaacacatgcttaagtaatcttttatctaatgtgggattcttttacacatctcctctcgaccaacaatt 112  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  7133750 aatatgatatgaagctatcaatcgcacctgtaaacatatgcttaagtcatcttttatataatgtgggattctattacacatctcctctcgaccaacaatt 7133849  T
Q  113 ttaagtttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcagaaacctaatagcaggtgaccttgagcttagttcgtgggcat 212  Q
    ||||||||||||||||||||||||| ||||||||||||||||||              ||||| | ||||||||||||||||||||||||||||||||||    
T  7133850 ttaagtttggtttgtggacataaataatgagtggtctgatagcg--------------gaaacttgatagcaggtgaccttgagcttagttcgtgggcat 7133935  T
Q  213 aaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  7133936 aaatggtgagtggtctgattgcggaaacttgatagcaggtgatctggtagatcttggagaggctctgatatcatattagaaat 7134018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 43117826 - 43117723
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttag 291  Q
    |||||||| |||||||| |||||||| || || |||||||||||||||| ||||||||||||| |   ||||||||||| |||||||||||  |||||||    
T  43117826 ttgagcttggttcgtggacataaatgatgggtggtccgatagcggaaacctgatagcaggtggcccaatagatcttggaaaggctctgatactatcttag 43117727  T
Q  292 aaat 295  Q
    ||||    
T  43117726 aaat 43117723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 95410 - 95509
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | ||||| |||||||| ||||||||||||| |   | ||||||||||||||||||||| ||||||||||||    
T  95410 gcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaat 95509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 25258210 - 25258309
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||| ||| || |||||||||||||||| ||||||||||||| |   | ||||||||||| ||||||||| ||||||||||||    
T  25258210 gcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaat 25258309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 25322000 - 25322099
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||| ||| || |||||||||||||||| ||||||||||||| |   | ||||||||||| ||||||||| ||||||||||||    
T  25322000 gcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaat 25322099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 254
Target Start/End: Complemental strand, 15590108 - 15590055
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtgg 254  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  15590108 gttcgtggacataaatggtgagtagcccgatagcggaaacttgatagcaggtgg 15590055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 293
Target Start/End: Original strand, 18333608 - 18333705
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaa 293  Q
    |||| |||||||| ||||||||||| || | ||||||||| |||| ||||||||||||| | | | ||||||| ||||||||||||| ||||||||||    
T  18333608 gcttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtggcccgatggatcttgaagaggctctgataccatcttagaa 18333705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 24270010 - 24270114
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttgga-gaggctctgatatcatctta 290  Q
    |||||||| |||||||| ||||||||||| || | |||||| ||||||| ||||||||||||| |   | ||||||||| |||||||||||| |||||||    
T  24270010 ttgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatctta 24270109  T
Q  291 gaaat 295  Q
     ||||    
T  24270110 aaaat 24270114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 24346641 - 24346745
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttgga-gaggctctgatatcatctta 290  Q
    |||||||| |||||||| ||||||||||| || | |||||| ||||||| ||||||||||||| |   | ||||||||| |||||||||||| |||||||    
T  24346641 ttgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatctta 24346740  T
Q  291 gaaat 295  Q
     ||||    
T  24346741 aaaat 24346745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 15480497 - 15480398
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||| ||| ||||||||||| || | || ||||||||||| ||||||||||||| |   | ||||||| ||||||||||||| ||||||||||||    
T  15480497 gcttggttcatggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaat 15480398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 43117843 - 43117768
Alignment:
Q  96 cctctcgaccaacaattttaagtttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||| ||||||||| | || || |||||| |||||||||||||||| |||||| |||||||||||||| |||||||    
T  43117843 cctcacgaccaacactattgagcttggttcgtggacataaatgatgggtggtccgatagcggaaacctgatagcag 43117768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 9368765 - 9368671
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||| |||| |||||| || |||| ||||||||||| ||||||||||||| |   | ||||||| ||||||||||||| || |||||||||    
T  9368765 gttcgtggacatacatggtgggtggtccaatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccaccttagaaat 9368671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 41666901 - 41667001
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttgga-gaggctctgatatcatcttagaaa 294  Q
    |||| |||||||| ||||||||||| || | |||||| ||||||| ||||||||||||| |     ||||||||| |||||||||||| |||||||||||    
T  41666901 gcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaa 41667000  T
Q  295 t 295  Q
    |    
T  41667001 t 41667001  T

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Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 6919338 - 6919392
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcag 250  Q
    |||| |||||||| |||||||||||||| |||||| ||||||||| |||||||||    
T  6919338 gcttggttcgtggacataaatggtgagtggtccgaaagcggaaacctgatagcag 6919392  T

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Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 8081258 - 8081344
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgata 282  Q
    |||| |||||||| ||||||||||| || ||||||||| ||| || ||||||||||||| |   | ||||||||||| |||||||||    
T  8081258 gcttggttcgtggacataaatggtgggtggtccgataggggatacctgatagcaggtggcccaatcgatcttggagaagctctgata 8081344  T

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Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 6919340 - 6919393
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcaga 172  Q
    |||||| ||||||||||||| ||||||||| || ||||||||||| ||||||||    
T  6919340 ttggttcgtggacataaatggtgagtggtccgaaagcggaaacctgatagcaga 6919393  T

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Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 11896305 - 11896358
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtgg 254  Q
    |||||||| ||||||||||| || |||||||||||||||| |||||| ||||||    
T  11896305 gttcgtggacataaatggtgggtggtccgatagcggaaacctgatagtaggtgg 11896358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 17150391 - 17150476
Alignment:
Q  210 cataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||| || | |||||||||||||| |||||| |||||| |   | ||||||| ||||||||||||| ||||||| ||||    
T  17150391 cataaatggtgggtggcccgatagcggaaacctgatagtaggtggcccaatggatcttgaagaggctctgataccatcttaaaaat 17150476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 17143302 - 17143250
Alignment:
Q  197 cttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagca 249  Q
    |||||||||||| ||||||||||| || || | ||||||||||||||||||||    
T  17143302 cttagttcgtggacataaatggtgggtggttcaatagcggaaacttgatagca 17143250  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 32908866 - 32908960
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||| | ||||||||||| ||   |||||||| ||||| ||||||||| ||| |   | ||||||| ||||||||| ||||||||||||||||    
T  32908866 gttcgttgacataaatggtgggtgacccgatagcagaaacctgatagcagatggcccaatggatcttgaagaggctctaatatcatcttagaaat 32908960  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 11896302 - 11896351
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatag 168  Q
    |||||| ||||||||||||| || |||||| |||||||||||||| ||||    
T  11896302 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatag 11896351  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 17016024 - 17016069
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgata 246  Q
    |||||||| ||||||||||| || |||||||||||||||| |||||    
T  17016024 gttcgtggacataaatggtgggtggtccgatagcggaaacctgata 17016069  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 17016021 - 17016065
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacct 163  Q
    |||||| ||||||||||||| || |||||| ||||||||||||||    
T  17016021 ttggttcgtggacataaatggtgggtggtccgatagcggaaacct 17016065  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 25258212 - 25258264
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||  || |||||| |||||||||||||| |||||||    
T  25258212 ttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcag 25258264  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 25322002 - 25322054
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||  || |||||| |||||||||||||| |||||||    
T  25322002 ttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcag 25322054  T

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Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 27413516 - 27413423
Alignment:
Q  202 ttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||| ||||||||||| || | |||||||||||||  ||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  27413516 ttcgtggacataaatggtgggtggcccgatagcggaaatctgataacaggtggtctaatagatcttggagaggctctgatatcatcttagaaat 27413423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 26173361 - 26173463
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttag 291  Q
    ||||||||||||||||| ||||||||||| |  |||||||||||||||| ||||||||||||||| | | ||| | | ||||||||||||||||| ||||    
T  26173361 ttgagcttagttcgtggacataaatggtggggggtccgatagcggaaacctgatagcaggtggtccgatggatatcgaagaggctctgatatcattttag 26173460  T
Q  292 aaa 294  Q
    |||    
T  26173461 aaa 26173463  T

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Target: chr1; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 4112684 - 4112783
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||| | ||||||||||| || || ||||||||||||| |||||||||||||||   | ||||||||||||||||||||| ||||||||||||    
T  4112684 gcttggttcgttgacataaatggtgggtggttcgatagcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccatcttagaaat 4112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 25145625 - 25145728
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttag 291  Q
    ||||||||  ||||||| ||| ||||||| || |||||||| ||||||| |||||||||||||     ||||||||||||||||||||||||||||||||    
T  25145625 ttgagcttgattcgtggacattaatggtgggtggtccgataacggaaacctgatagcaggtgggtcaatagatcttggagaggctctgatatcatcttag 25145724  T
Q  292 aaat 295  Q
    ||||    
T  25145725 aaat 25145728  T

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Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 26177078 - 26176984
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||  |||||||||| || |||||||||||||||  ||||||||||||| |   | ||||||||||||||||||||||||||||||||||    
T  26177078 gttcgtggatataaatggtgggtggtccgatagcggaaatctgatagcaggtggcccaatggatcttggagaggctctgatatcatcttagaaat 26176984  T

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Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 51460347 - 51460450
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttag 291  Q
    ||||| || |||||||| || |||||||| || | |||||||||||||| ||||||||||||| |   | ||||||||||||||||||||||||| ||||    
T  51460347 ttgagtttggttcgtggacacaaatggtgggtcgcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatatcattttag 51460446  T
Q  292 aaat 295  Q
    ||||    
T  51460447 aaat 51460450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 196 - 281
Target Start/End: Complemental strand, 25713333 - 25713248
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgat 281  Q
    |||| |||||||| ||||||||||| || | |||||||||||||||||||||||||||| |   | ||||||||||||||||||||    
T  25713333 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaatggatcttggagaggctctgat 25713248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 203 - 295
Target Start/End: Complemental strand, 16163101 - 16163009
Alignment:
Q  203 tcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||| ||||||||||  || | |||||||||||||| ||||||||||||| |   | ||||||||||||||| ||||||||||||| ||||    
T  16163101 tcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccattggatcttggagaggctttgatatcatcttaaaaat 16163009  T

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Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 39348261 - 39348361
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttgga-gaggctctgatatcatcttagaaa 294  Q
    |||| |||||||| ||||||||||| || ||||||||| |||||| ||||||||||||| |   | || |||||| |||||||||||| |||||||||||    
T  39348261 gcttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggcccaatggaccttggaggaggctctgataccatcttagaaa 39348360  T
Q  295 t 295  Q
    |    
T  39348361 t 39348361  T

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Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 4112911 - 4113014
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttag 291  Q
    |||||||| |||||||| ||||||||||| || |||| ||||||||||| ||||||  |||||     | |||||||||||||||| |||| ||||||||    
T  4112911 ttgagcttggttcgtggacataaatggtgggtggtccaatagcggaaacctgatagatggtggctcaatggatcttggagaggctccgataccatcttag 4113010  T
Q  292 aaat 295  Q
    ||||    
T  4113011 aaat 4113014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 30370005 - 30369911
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||| ||||||||||| || | ||||||| |||||| ||||||||||||  |   | |||||||||||||||||||||  |||||||||||    
T  30370005 gttcgtggacataaatggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatcttggagaggctctgatacaatcttagaaat 30369911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 38733293 - 38733227
Alignment:
Q  229 gatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||||||| |||||||||||||||   | |||||||||||| |||||||| ||||||||||||    
T  38733293 gatagcggaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaat 38733227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 35772204 - 35772105
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| ||||||||| ||| |   | |||||||   ||||||||||| ||||||||||||    
T  35772204 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcagatggcccaatggatcttgagaaggctctgataccatcttagaaat 35772105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 2859536 - 2859635
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | |||||||| ||||| | |||| |||||| |   | ||||||| ||||||||| ||| ||||||||||||    
T  2859536 gcttggttcgtggacataaatggtgggtggcccgatagcagaaacctaatagaaggtggcccaatggatcttgaagaggctctaataccatcttagaaat 2859635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 7307895 - 7307841
Alignment:
Q  118 tttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcaga 172  Q
    ||||||| ||||||||||||| || ||||||  ||||||||||||| ||||||||    
T  7307895 tttggttcgtggacataaatggtgggtggtccaatagcggaaacctgatagcaga 7307841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 31496294 - 31496340
Alignment:
Q  210 cataaatggtgagtagtccgatagcggaaacttgatagcaggtggtc 256  Q
    ||||||||||| || |||||||||||| ||| |||||||||||||||    
T  31496294 cataaatggtgggtggtccgatagcgggaacctgatagcaggtggtc 31496340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 282
Target Start/End: Complemental strand, 52961526 - 52961436
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgata 282  Q
    ||||||||  ||||||  ||||| ||||| || | |||||||||||||| ||||||||||||| |   | ||||||| |||||||||||||    
T  52961526 ttgagcttgtttcgtgtacataactggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgata 52961436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 7307891 - 7307842
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcag 250  Q
    |||||||| ||||||||||| || |||| ||||||||||| |||||||||    
T  7307891 gttcgtggacataaatggtgggtggtccaatagcggaaacctgatagcag 7307842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 35772202 - 35772149
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcaga 172  Q
    |||||| ||||||||||||| || |||| | |||||||||||||| ||||||||    
T  35772202 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaga 35772149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 9146772 - 9146872
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggaga-ggctctgatatcatcttagaaa 294  Q
    |||| |||||||| ||||||||||| ||   |||||||||| ||| | || |||| |||||   | ||||||||||| |||||||||| |||||||||||    
T  9146772 gcttggttcgtggacataaatggtgggtgacccgatagcggtaaccttattgcagttggtccaatggatcttggagaaggctctgataccatcttagaaa 9146871  T
Q  295 t 295  Q
    |    
T  9146872 t 9146872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 39348263 - 39348315
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||||| ||||| |||||||| |||||||    
T  39348263 ttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcag 39348315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 31197793 - 31197690
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttag 291  Q
    |||||||| |||||||| ||||||||||| || |||||||||||||||| ||||||||||||| |   | ||||| ||||||||||||||| ||||||||    
T  31197793 ttgagcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatctcggagaggctctgataccatcttag 31197694  T
Q  292 aaat 295  Q
    ||||    
T  31197693 aaat 31197690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 20301436 - 20301337
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||| | ||||||||||| || |||||||||||||||| ||||||||||||| |   | ||||||| ||||||||||||| ||||||||||||    
T  20301436 gcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaat 20301337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 21088068 - 21087969
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||| | ||||||||||| || |||||||||||||||| ||||||||||||| |   | ||||||| ||||||||||||| ||||||||||||    
T  21088068 gcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaat 21087969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 290
Target Start/End: Original strand, 18004238 - 18004332
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatctta 290  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| ||||||||||||| |   | ||||||||||||||||||||| |||||||    
T  18004238 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatctta 18004332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 3157468 - 3157567
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| ||   ||||||||| |||| |||||||||||||||   | ||| ||||||||||||||||||||||||| ||||    
T  3157468 gcttggttcgtggacataaatggtgggtgtcccgatagcgaaaacctgatagcaggtggtccaatggattttggagaggctctgatatcatcttataaat 3157567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 295
Target Start/End: Complemental strand, 41790838 - 41790734
Alignment:
Q  191 cttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatctta 290  Q
    |||| |||| |||| ||| ||||||||||| || |  ||||||||||||| ||||||||||||| |   | ||||||| ||||||||||||| |||||||    
T  41790838 cttgggcttggttcatggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatctta 41790739  T
Q  291 gaaat 295  Q
    |||||    
T  41790738 gaaat 41790734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 8084302 - 8084203
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| ||  ||| |||||| |||| |||||||| |||| |   | ||||||||||||||||||||| ||||||||||||    
T  8084302 gcttggttcgtggacataaatggtgggtgatccaatagcgaaaacctgatagcatgtggcccaatggatcttggagaggctctgataccatcttagaaat 8084203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 11232338 - 11232437
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| ||    ||||||||||||| ||||| ||||||| |   | ||||||||||||||||||||| ||||||||||||    
T  11232338 gcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaat 11232437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 12688247 - 12688148
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||||| ||||||||||| || | || ||||  ||||| ||||||||||||| |   | ||||||| ||||||||| ||||||||||||||||    
T  12688247 gcttagttcgtggacataaatggtgggtggcccaatagaagaaacctgatagcaggtggcccaatggatcttgaagaggctctaatatcatcttagaaat 12688148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 39052838 - 39052937
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | | |||||||||||| |||||||||| || |   | ||||||||||||||||| ||| ||||||||||||    
T  39052838 gcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcagggggccaaatggatcttggagaggctctaataccatcttagaaat 39052937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 5932107 - 5932192
Alignment:
Q  210 cataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||| || | |||||| ||||||| |||||| ||||||||   | ||||||||||||||||||||| ||||||| ||||    
T  5932107 cataaatggtgggtggcccgataacggaaacgtgatagtaggtggtccaatggatcttggagaggctctgataccatcttaaaaat 5932192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 7669597 - 7669536
Alignment:
Q  193 tgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtgg 254  Q
    ||||||| |||||||| ||||||||||| || ||||||||| |||||| |||||||||||||    
T  7669597 tgagcttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtgg 7669536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 10615538 - 10615470
Alignment:
Q  227 ccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||||||||| ||||| ||||||||    | ||||||||||||||||||||| ||||||||||||    
T  10615538 ccgatagcggaaacctgatatcaggtggtacaatggatcttggagaggctctgataccatcttagaaat 10615470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 10614848 - 10614947
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| || ||||||||  |  |||||||||  ||||||||| ||||||||||   | ||||||||||||||| ||||||||||||| ||||    
T  10614848 gcttggttcgtggacacaaatggtggatgttccgatagcaaaaacttgattgcaggtggtccaatggatcttggagaggctatgatatcatcttataaat 10614947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 37868492 - 37868591
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||  ||||||||||| || | || ||||||||||||||||||| ||||| |   | ||||||||||||||| ||||| ||||||| ||||    
T  37868492 gcttggttcgtgtacataaatggtgggtggcccaatagcggaaacttgatagcgggtggcccaatggatcttggagaggctatgataccatcttaaaaat 37868591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 35682921 - 35682983
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtgg 254  Q
    |||||||| |||||||| ||||||||||| || | |||||||||||||| | |||||||||||    
T  35682921 ttgagcttggttcgtggacataaatggtgggtggcccgatagcggaaacctaatagcaggtgg 35682983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 39960132 - 39960074
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtgg 254  Q
    |||| |||||||| ||||||||||| ||||  ||||||||||||| |||||||||||||    
T  39960132 gcttggttcgtggacataaatggtgggtagctcgatagcggaaacctgatagcaggtgg 39960074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 3157153 - 3157213
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtc 256  Q
    |||| |||||||| ||||||||||| ||   |||||||||||||| |||||||||||||||    
T  3157153 gcttggttcgtggacataaatggtgggtgtcccgatagcggaaacctgatagcaggtggtc 3157213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 24532361 - 24532429
Alignment:
Q  227 ccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||||||||| ||||||||||||| |   | ||||||| || |||||||||| ||||||||||||    
T  24532361 ccgatagcggaaacctgatagcaggtggcccaatggatcttgaaggggctctgataccatcttagaaat 24532429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 31197787 - 31197735
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||||| |||||||||||||| |||||||    
T  31197787 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcag 31197735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 35682927 - 35682979
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||| | ||||||||||||||||||||||    
T  35682927 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctaatagcag 35682979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 5675965 - 5676064
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||| | ||||||||||| ||   || ||| || |||| ||||||||||||| || ||  |||||| |||| |||||||||||||||||||||    
T  5675965 gcttggttcgtagacataaatggtgggtgacccaatatcgaaaacctgatagcaggtggcctagtgaatcttgaagagactctgatatcatcttagaaat 5676064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 275
Target Start/End: Original strand, 39052681 - 39052760
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggc 275  Q
    |||| |||||||| ||||||||||| || | | |||||||||||| ||||||||||||| |   | ||||||||||||||    
T  39052681 gcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcaggtggccaaattgatcttggagaggc 39052760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 294
Target Start/End: Complemental strand, 10615774 - 10615708
Alignment:
Q  228 cgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaa 294  Q
    |||||||| |||| |||||||||||||| |  | |||||| |||||| ||| |||||||||||||||    
T  10615774 cgatagcgaaaacgtgatagcaggtggtttaatggatcttagagaggttctaatatcatcttagaaa 10615708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 5675883 - 5675936
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtgg 254  Q
    |||||||| ||||||||||| ||   ||||||||| ||||||||||||||||||    
T  5675883 gttcgtggacataaatggtgggtgacccgatagcgaaaacttgatagcaggtgg 5675936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 295
Target Start/End: Original strand, 11232169 - 11232202
Alignment:
Q  262 gatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||||||||||||| ||||||||||||    
T  11232169 gatcttggagaggctctgataccatcttagaaat 11232202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 295
Target Start/End: Original strand, 36917414 - 36917447
Alignment:
Q  262 gatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||||||||||||| ||||||||||||    
T  36917414 gatcttggagaggctctgataccatcttagaaat 36917447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 7669592 - 7669540
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||||| ||||| |||||||| |||||||    
T  7669592 ttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcag 7669540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 15042795 - 15042847
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||| | || |||| |||||||||||||||| |||||||    
T  15042795 ttggttcgtggacataaacggtgggtggcctgatagcggaaacctgatagcag 15042847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 18004240 - 18004292
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||| | |||||||||||||| |||||||    
T  18004240 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcag 18004292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 20301434 - 20301382
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| || |||||||||| || |||||| |||||||||||||| |||||||    
T  20301434 ttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcag 20301382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 21088066 - 21088014
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| || |||||||||| || |||||| |||||||||||||| |||||||    
T  21088066 ttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcag 21088014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 39052683 - 39052735
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||| | |||||||||||||| |||||||    
T  39052683 ttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcag 39052735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 39052840 - 39052892
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||| | |||||||||||||| |||||||    
T  39052840 ttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcag 39052892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 5663 - 5762
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || |||||||||||||||| |||||||||||||     | ||||||||||||||||||||| ||||||||||||    
T  5663 gcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaat 5762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 5665 - 5717
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||||| |||||||||||||| |||||||    
T  5665 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcag 5717  T

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Target: chr7 (Bit Score: 52; Significance: 8e-21; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 36277135 - 36277234
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || |||||||||||||||| |||||| |||||| |   | ||||||||||||||||||||| ||||||||||||    
T  36277135 gcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagtaggtggcccaatggatcttggagaggctctgataacatcttagaaat 36277234  T

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Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 21861469 - 21861370
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| ||||| ||||||| |   | ||||||||||||||||||||| ||||||||||||    
T  21861469 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaat 21861370  T

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Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 25620311 - 25620212
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | || ||||||||||| ||||||||||||| |   | ||||||||||||||||||||| ||||||||||||    
T  25620311 gcttggttcgtggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaat 25620212  T

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Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 28080806 - 28080740
Alignment:
Q  229 gatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||||||||||||||||||||| |   ||||||||| ||||||||||||||||||||||||||    
T  28080806 gatagcggaaacttgatagcaggtggcccaatagatcttgaagaggctctgatatcatcttagaaat 28080740  T

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Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 1596768 - 1596669
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| ||||| || |||| |   | ||||||||||||||||||||| ||||||||||||    
T  1596768 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacatgtggcccaatggatcttggagaggctctgataccatcttagaaat 1596669  T

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Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 18826397 - 18826496
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || |  |||||||||||| |||||||||| |||    || ||||||| ||||||||||||||||||||||||||    
T  18826397 gcttggttcgtggtcataaatggtgggtggctcgatagcggaaatttgatagcagatggctcagtggatcttgaagaggctctgatatcatcttagaaat 18826496  T

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Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 33834366 - 33834267
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | ||||||| | |||| ||||||||||||| |   | ||||||||||||||||||||| ||||||||||||    
T  33834366 gcttggttcgtggacataaatggtgggtggcccgatagggaaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaat 33834267  T

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Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 29469774 - 29469681
Alignment:
Q  202 ttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||| ||||||||||| || | |||||||||||| | ||||| ||||||| |   | ||||||||||||||||||||| ||| ||||||||    
T  29469774 ttcgtggacataaatggtgggtggcccgatagcggaagcctgataacaggtggcccaatggatcttggagaggctctgataccatattagaaat 29469681  T

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Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 292
Target Start/End: Complemental strand, 31892327 - 31892231
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttaga 292  Q
    |||| |||||||| ||||||||||| || | | |||| ||||||| ||||||||||||| |   ||| ||||||||||||||||||  |||||||||    
T  31892327 gcttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaataggtcttggagaggctctgattccatcttaga 31892231  T

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Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 4886504 - 4886405
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || |  ||||||  ||||||||||||||||||| |   | |||||||||||| | |||||| ||||||||||||    
T  4886504 gcttggttcgtggacataaatggtgggtggctcgatagtagaaacttgatagcaggtggcccaatggatcttggagagaccctgataccatcttagaaat 4886405  T

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Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 22574776 - 22574677
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||| | ||||||||||| || |||||||||| ||||| ||||||||||||| |   | |||||||||||| |||| ||| |||| |||||||    
T  22574776 gcttggttcgtagacataaatggtgggtggtccgatagctgaaacctgatagcaggtggcccaatggatcttggagagactcttataccatcatagaaat 22574677  T

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Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 33996223 - 33996319
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | ||||| |||||||| ||||||||||||| |   | ||   |||||||||||||||| ||||||||||||    
T  33996223 gcttggttcgtggacataaatggtgggtggcccgattgcggaaacctgatagcaggtggcccaatgga---tggagaggctctgataccatcttagaaat 33996319  T

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Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 9689045 - 9689108
Alignment:
Q  232 agcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||| |||||||||||||||   | ||||||||||||||||||||| ||| | ||||||    
T  9689045 agcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccatatcagaaat 9689108  T

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Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 48661464 - 48661563
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | |||| ||||||||| |||||||||||||     | | ||||  ||||||||||||||||| ||||||||    
T  48661464 gcttggttcgtggacataaatggtgggtggcccgaaagcggaaacctgatagcaggtggctcaatggttcttaaagaggctctgatatcatattagaaat 48661563  T

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Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 2315170 - 2315228
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtgg 254  Q
    |||| |||||||| ||||||||||| || ||||||| |||||||  |||||||||||||    
T  2315170 gcttggttcgtggacataaatggtgggtggtccgattgcggaaatctgatagcaggtgg 2315228  T

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Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 3519869 - 3519923
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcag 250  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| |||||||||    
T  3519869 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcag 3519923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 291
Target Start/End: Complemental strand, 10903231 - 10903165
Alignment:
Q  225 gtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttag 291  Q
    |||||||||||||||| ||||| ||||||| |   | ||||||||||| ||||||||||||| ||||    
T  10903231 gtccgatagcggaaacatgataacaggtggcccaatggatcttggagaagctctgatatcattttag 10903165  T

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Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 20305469 - 20305415
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcag 250  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| |||||||||    
T  20305469 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcag 20305415  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 17948408 - 17948367
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaa 160  Q
    |||||||||||||| ||||| || ||||||||||||||||||    
T  17948408 ttggtttgtggacacaaatggtgggtggtctgatagcggaaa 17948367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 20305467 - 20305414
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcaga 172  Q
    |||||| ||||||||||||| || |||| | |||||||||||||| ||||||||    
T  20305467 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaga 20305414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 36277137 - 36277186
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatag 168  Q
    |||||| ||||||||||||| || |||||| |||||||||||||| ||||    
T  36277137 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatag 36277186  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 36993231 - 36993316
Alignment:
Q  210 cataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||| ||| || |||| ||||||||||  |||||||| |||| |   | ||||||| ||||||||||||| ||||||||||||    
T  36993231 cataaatagtgggtggtccaatagcggaaatctgatagcacgtggcccaatggatcttgaagaggctctgataccatcttagaaat 36993316  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 3519871 - 3519923
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||| | |||||||||||||| |||||||    
T  3519871 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcag 3519923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 31892325 - 31892273
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||| |||||| ||||||||| |||||||    
T  31892325 ttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcag 31892273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 8e-21; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 2029944 - 2029845
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || |||||||||||||||| | ||||||||||| |   | ||||||||||||||||||||| ||||||||||||    
T  2029944 gcttggttcgtggacataaatggtgggtggtccgatagcggaaacctaatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaat 2029845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 16419446 - 16419343
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttag 291  Q
    |||||||| |||||||| ||||||||||| || |  ||||||||||||| ||||||||||||| |   | ||||||||||||||||||||| ||||||||    
T  16419446 ttgagcttggttcgtggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttag 16419347  T
Q  292 aaat 295  Q
    ||||    
T  16419346 aaat 16419343  T

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Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 14466319 - 14466418
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| ||||| || |||| |   | ||||||||||||||||||||| ||||||||||||    
T  14466319 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaagtggcccaatggatcttggagaggctctgataccatcttagaaat 14466418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 40379353 - 40379452
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| ||||||||  |||||||||| || | ||||||| |||||| ||||||||||||| ||  | ||||||||| ||||||||||| ||||||||||||    
T  40379353 gcttggttcgtggatataaatggtgggtggcccgatagaggaaacctgatagcaggtggcctaatggatcttggaaaggctctgataccatcttagaaat 40379452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 34893595 - 34893506
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatctta 290  Q
    |||||||| ||||||||||| || ||||||||||| |||| |||||| |||||| |   | ||||||||||||||||||||| |||||||    
T  34893595 gttcgtggacataaatggtgggtggtccgatagcgaaaacctgatagtaggtggcccaatggatcttggagaggctctgataccatctta 34893506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 2029942 - 2029890
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||||| ||||||||||||||||||||||    
T  2029942 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctaatagcag 2029890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 5711583 - 5711683
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttgga-gaggctctgatatcatcttagaaa 294  Q
    |||| |||||||| ||||||||||| || | |||||| ||||||| |||||||||||||||     ||||||||| ||||||||||||  ||||||||||    
T  5711583 gcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtccaacggatcttggaggaggctctgatactatcttagaaa 5711682  T
Q  295 t 295  Q
    |    
T  5711683 t 5711683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 24396038 - 24395939
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||| ||| ||||||||||| || ||||||||| | |||| ||| |||||||||||   | ||||||| ||||||||||||| | ||||||||||    
T  24396038 gcttggttcatggacataaatggtgggtggtccgatagtgaaaacatgagagcaggtggtccaatggatcttgaagaggctctgataccctcttagaaat 24395939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 33606198 - 33606297
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | | |||||||||||| |||||||| |||  |   ||||||||| |||| || ||||||||||||||||||    
T  33606198 gcttggttcgtggacataaatggtgggtggcctgatagcggaaacctgatagcaagtgacccaatagatcttgaagagactttgatatcatcttagaaat 33606297  T

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Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 15124697 - 15124791
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||| |||||||||||  |   |||||| || |||| |||||||||||||||   | |||||||||||| |||||||| ||||||||||||    
T  15124697 gttcgtggacataaatggtggatgacccgataacgaaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaat 15124791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 42895409 - 42895323
Alignment:
Q  210 cataaatggtgagtagtccgatagcggaaacttgatagcaggtgg-tctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||| || | |||||||||||||||||||| |||||||  ||  | |||||| |||||||||||||| |||| |||||||    
T  42895409 cataaatggtgggtcgcccgatagcggaaacttgatatcaggtggccctaatggatcttagagaggctctgataccatcatagaaat 42895323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 93269 - 93362
Alignment:
Q  202 ttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||| ||||| ||||| || | |||||| ||||||  ||||||||||||| |   | ||||||||||||||||||||| ||||||| ||||    
T  93269 ttcgtggacataattggtgggtggcccgataacggaaagctgatagcaggtggcccaatggatcttggagaggctctgataccatcttaaaaat 93362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 293
Target Start/End: Original strand, 17525243 - 17525339
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaa 293  Q
    |||| |||||||| ||||||||||| || | ||||||||||| || ||||||||||||| |   | ||| ||| ||||||||| ||||||||||||||    
T  17525243 gcttggttcgtggacataaatggtgggtggcccgatagcggatacctgatagcaggtggcccaatggat-ttgaagaggctcttatatcatcttagaa 17525339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 16533482 - 16533390
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaa 293  Q
    |||||||| ||||||||||| || | ||||||||| |||| ||||||||||| | |   | ||||||| ||||||||||||| ||| ||||||    
T  16533482 gttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtagcccaatggatcttgaagaggctctgataccattttagaa 16533390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 170
Target Start/End: Original strand, 33606200 - 33606251
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagca 170  Q
    |||||| ||||||||||||| || |||| |||||||||||||||| ||||||    
T  33606200 ttggttcgtggacataaatggtgggtggcctgatagcggaaacctgatagca 33606251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 17719570 - 17719476
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||| |||||||||||  | | | ||||| |||||| ||||||||||||| |   | |||||||||||| || ||||| ||||||||||||    
T  17719570 gttcgtggacataaatggtggatggccggataggggaaacctgatagcaggtggccaaatggatcttggagagactttgataccatcttagaaat 17719476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 18607153 - 18607239
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgata 282  Q
    |||| |||||| | ||||||||||| || | |||||| ||||||| |||||||| |||| |   | |||||||||||||||||||||    
T  18607153 gcttggttcgtagacataaatggtgggttgcccgataacggaaacctgatagcatgtggcccaatggatcttggagaggctctgata 18607239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 295
Target Start/End: Original strand, 21383612 - 21383678
Alignment:
Q  230 atagcggaaacttgatagcaggtggtctggtagatcttgga-gaggctctgatatcatcttagaaat 295  Q
    ||||| ||||||||||||||||||| |    |||||||||| |||||||||||| ||||||||||||    
T  21383612 atagcagaaacttgatagcaggtggcccaacagatcttggaggaggctctgataccatcttagaaat 21383678  T

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Target: scaffold0045 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 295
Target Start/End: Original strand, 41112 - 41214
Alignment:
Q  193 tgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttaga 292  Q
    |||| ||||||||||||||||||| ||| || || |||||||| |||||||||||||||||| |   |  |||||||||||||||||||| |||||||||    
T  41112 tgagtttagttcgtgggcataaatagtgggtggttcgatagcgcaaacttgatagcaggtggcccaatgaatcttggagaggctctgataccatcttaga 41211  T
Q  293 aat 295  Q
    |||    
T  41212 aat 41214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 50543474 - 50543575
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggta--gatcttggagaggctctgatatcatcttagaa 293  Q
    |||| |||||||| ||||||||||| || | |||||| ||||||| |||||||||||||||   ||  ||||||||||||||||||||||||||||||||    
T  50543474 gcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtcaaatatggatcttggagaggctctgatatcatcttagaa 50543573  T
Q  294 at 295  Q
    ||    
T  50543574 at 50543575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 28245670 - 28245769
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| ||||||||||||| |   | ||||||||||||||||||||| ||| ||||||||    
T  28245670 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaat 28245769  T

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Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 22231217 - 22231316
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||  || | |||||||||||||| ||||||||||||| |   | ||| ||||||||||||||||| ||||||||||||    
T  22231217 gcttggttcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccaatggattttggagaggctctgataccatcttagaaat 22231316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 40717350 - 40717449
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| ||| |||| ||||||||||| || |||||||||||||||| |||| |||||||| |   | ||| ||||||||||||||||| ||||||||||||    
T  40717350 gcttggtttgtggacataaatggtgggtggtccgatagcggaaacctgatggcaggtggcccaatggatattggagaggctctgataccatcttagaaat 40717449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 295
Target Start/End: Original strand, 30530103 - 30530170
Alignment:
Q  228 cgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||||  ||||||||||||| ||  | ||||||||||||||||||||| ||||||||||||    
T  30530103 cgatagcggaaatctgatagcaggtggcctaatggatcttggagaggctctgataccatcttagaaat 30530170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 35796886 - 35796985
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| ||||||||  |||||||||| || | |||||||||||||| ||||||||||| |||   | ||||| | ||||||||||||| ||||||||||||    
T  35796886 gcttggttcgtggagataaatggtgggtggcccgatagcggaaacctgatagcaggtagtccaatggatctcgaagaggctctgataccatcttagaaat 35796985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 254
Target Start/End: Original strand, 5398619 - 5398677
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtgg 254  Q
    |||| |||||||| ||||||||||| || |||||||||||||||| |||||||||||||    
T  5398619 gcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtgg 5398677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 4905659 - 4905744
Alignment:
Q  210 cataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||| || | |||||||| ||||| | ||||||||||| |   | || |||||||||||||||||||||||||||||||    
T  4905659 cataaatggtgggtggcccgatagcagaaacctaatagcaggtggcccaatggagcttggagaggctctgatatcatcttagaaat 4905744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 42662636 - 42662587
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatag 168  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  42662636 ttggttcgtggacataaatgatgagtgatctgatagcggaaacctgatag 42662587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 295
Target Start/End: Original strand, 34357970 - 34358038
Alignment:
Q  227 ccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||||||||| ||||| || |||| |   ||||||||| ||||||||||||||||||||||||||    
T  34357970 ccgatagcggaaacctgataacaagtggcccaatagatcttgtagaggctctgatatcatcttagaaat 34358038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 6218346 - 6218280
Alignment:
Q  229 gatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||||||| |||||| ||||| ||   | ||||||||||||||||||||| ||||||||||||    
T  6218346 gatagcggaaacctgatagtaggtgatccaatggatcttggagaggctctgataccatcttagaaat 6218280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 27634225 - 27634311
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgata 282  Q
    |||| |||||||| ||||||  ||| || |||||||||| ||||| |||||||| ||||||   | |||||||||||||||||||||    
T  27634225 gcttggttcgtggacataaacagtgggtggtccgatagcagaaacctgatagcaagtggtccaatggatcttggagaggctctgata 27634311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 9908771 - 9908836
Alignment:
Q  227 ccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttaga 292  Q
    |||||| ||||||  |||||||||||||||   |||||||||||||| |||||||| |||||||||    
T  9908771 ccgataacggaaatctgatagcaggtggtccaatagatcttggagagactctgataccatcttaga 9908836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 5398621 - 5398673
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||||| |||||||||||||| |||||||    
T  5398621 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcag 5398673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 163
Target Start/End: Original strand, 40717352 - 40717396
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacct 163  Q
    |||||||||||||||||||| || |||||| ||||||||||||||    
T  40717352 ttggtttgtggacataaatggtgggtggtccgatagcggaaacct 40717396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 13555422 - 13555485
Alignment:
Q  232 agcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||| |||||||||||||||   | ||||||||||||||||||||| ||| | ||||||    
T  13555422 agcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccatatcagaaat 13555485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 254
Target Start/End: Original strand, 25324193 - 25324236
Alignment:
Q  211 ataaatggtgagtagtccgatagcggaaacttgatagcaggtgg 254  Q
    |||||||||| || | ||||||||||||||||||||||||||||    
T  25324193 ataaatggtgggtggcccgatagcggaaacttgatagcaggtgg 25324236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 35819037 - 35819136
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| ||   |||||||||||||| ||||||||||||| |   | |||||| ||||| |||||||  ||||||| ||||    
T  35819037 gcttggttcgtggacataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatggatcttagagagactctgatgccatcttaaaaat 35819136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 5398354 - 5398408
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcag 250  Q
    |||| |||||||| ||||||||||| || ||||||||| |||||| |||||||||    
T  5398354 gcttggttcgtggacataaatggtgggtggtccgataggggaaacctgatagcag 5398408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 35645314 - 35645404
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttag 291  Q
    |||||||| ||||||||| | || | ||||||||||||||||||||||| |||| |   | |||| | |||||||||||||| ||| ||||    
T  35645314 gttcgtggacataaatggcgggtggcccgatagcggaaacttgatagcatgtggccccatggatcgttgagaggctctgataccatgttag 35645404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 35645603 - 35645693
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttag 291  Q
    |||||||| ||||||||| | || | ||||||||||||||||||||||| |||| |   | |||| | |||||||||||||| ||| ||||    
T  35645603 gttcgtggacataaatggcgggtggcccgatagcggaaacttgatagcatgtggccccatggatcgttgagaggctctgataccatgttag 35645693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 36686062 - 36686108
Alignment:
Q  208 ggcataaatggtgagtagtccgatagcggaaacttgatagcaggtgg 254  Q
    ||||||||||||| || | |||||||||||||| |||||||||||||    
T  36686062 ggcataaatggtgggtggcccgatagcggaaacctgatagcaggtgg 36686108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 5398356 - 5398409
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcaga 172  Q
    |||||| ||||||||||||| || |||||| ||||| |||||||| ||||||||    
T  5398356 ttggttcgtggacataaatggtgggtggtccgataggggaaacctgatagcaga 5398409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 7926469 - 7926404
Alignment:
Q  230 atagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||| ||||||||||||| |   | ||||||||||||||||||||| |||||| |||||    
T  7926469 atagtggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttcgaaat 7926404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 31945083 - 31944999
Alignment:
Q  210 cataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||  || |||||||||| ||||| | |||||| ||||||   |||||||||||||| ||||||| |||| ||||||||    
T  31945083 cataaatggtaggtggtccgatagcagaaacctaatagcatgtggtcaa-tagatcttggagagactctgatgtcattttagaaat 31944999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 31945097 - 31945044
Alignment:
Q  117 gtttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagca 170  Q
    ||||||||||| |||||||||| |  |||||| |||||| ||||||||||||||    
T  31945097 gtttggtttgtagacataaatggtaggtggtccgatagcagaaacctaatagca 31945044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 33108045 - 33107992
Alignment:
Q  118 tttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    ||||||| ||||||||||||| || |||||| |||| ||||||||| |||||||    
T  33108045 tttggttagtggacataaatggtgggtggtccgataacggaaaccttatagcag 33107992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 28245672 - 28245724
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||| | |||||||||||||| |||||||    
T  28245672 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcag 28245724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 35788833 - 35788781
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||| |||||| ||||||||| |||||||    
T  35788833 ttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcag 35788781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 13353376 - 13353277
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| ||||| ||||||| |   | ||||||||||||||||||||| ||||||||||||    
T  13353376 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaat 13353277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 33796501 - 33796402
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| ||||| ||||||| |   | ||||||||||||||||||||| ||||||||||||    
T  33796501 gcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaat 33796402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 12330088 - 12330187
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || | ||||| |||||||| ||||||||||||| |   | ||||||||||||||||||||| ||| ||||||||    
T  12330088 gcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaat 12330187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 295
Target Start/End: Original strand, 7638754 - 7638856
Alignment:
Q  193 tgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttaga 292  Q
    ||||||| |||||| | |||||||| || ||  || |||||||||||| |||||||||||| ||   ||||||||||||| ||||||||||| |||||||    
T  7638754 tgagcttggttcgtagacataaatgatgggtgatctgatagcggaaacctgatagcaggtgatccaatagatcttggagaagctctgatatcttcttaga 7638853  T
Q  293 aat 295  Q
    |||    
T  7638854 aat 7638856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 4868721 - 4868821
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttgga-gaggctctgatatcatcttagaaa 294  Q
    |||| |||||||| ||||||||||| || | |||||| ||||||| ||||||||||||| |  |  ||||||||| |||||||||||| |||||||||||    
T  4868721 gcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccagcggatcttggaggaggctctgataccatcttagaaa 4868820  T
Q  295 t 295  Q
    |    
T  4868821 t 4868821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 293
Target Start/End: Original strand, 6237621 - 6237713
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaa 293  Q
    |||||||| ||||||||||| || |||||||||||||||| || ||||| ||||||   | ||||||| |||| |||| ||| ||||||||||    
T  6237621 gttcgtggacataaatggtgggtggtccgatagcggaaacctggtagcaagtggtccaatggatcttgaagagactctaataccatcttagaa 6237713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 6400764 - 6400862
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| || |||||||||| ||||| ||||||||||| | |   ||||| ||||||||||| ||||| ||||||| ||||    
T  6400764 gcttggttcgtggacataaatggtgggtggtccgatagcagaaacctgatagcaggt-gacccatagattttggagaggctttgataccatcttaaaaat 6400862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 33631710 - 33631813
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttag 291  Q
    |||||||| ||| |||| ||||||||||| ||   |||||||| ||||| ||||| ||||||  |   ||||||||||||| |||||||||||||||||     
T  33631710 ttgagcttggttagtggacataaatggtgggtgtcccgatagcagaaacctgatatcaggtgacccaatagatcttggagatgctctgatatcatcttaa 33631809  T
Q  292 aaat 295  Q
    ||||    
T  33631810 aaat 33631813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 2736319 - 2736364
Alignment:
Q  126 gtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||||||||||||| |||||| |||| |||||||||||||||||    
T  2736319 gtggacataaatgatgggtggtccgataacggaaacctaatagcag 2736364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 3921699 - 3921634
Alignment:
Q  230 atagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||||||||||||||||||| ||   | ||||||| ||||||||||||| ||| ||||||||    
T  3921699 atagcggaaacttgatagcaggtgatccaatggatcttgaagaggctctgataccatattagaaat 3921634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 295
Target Start/End: Complemental strand, 6054310 - 6054245
Alignment:
Q  230 atagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||| ||||||||||||| ||  |  |||||| ||||| ||||||||||||||||||||    
T  6054310 atagcggaaacctgatagcaggtggcctaatgaatcttgaagaggttctgatatcatcttagaaat 6054245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 292
Target Start/End: Original strand, 28648872 - 28648953
Alignment:
Q  211 ataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttaga 292  Q
    |||||||||| |||| |||||||||||||| | ||||||||||||   | |||| ||||| || ||||||||||| ||||||    
T  28648872 ataaatggtgggtagcccgatagcggaaacctaatagcaggtggttcagcagatattggatagactctgatatcaacttaga 28648953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 7638759 - 7638811
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| || ||||||||||||| ||| ||||||||||||||||| |||||||    
T  7638759 ttggttcgtagacataaatgatgggtgatctgatagcggaaacctgatagcag 7638811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 24554295 - 24554233
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtgg 254  Q
    |||||||| |||||| | ||||||||||| || ||| |||||||| ||| |||||||||||||    
T  24554295 ttgagcttggttcgttgacataaatggtgggtggtctgatagcggtaacctgatagcaggtgg 24554233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 31961086 - 31961028
Alignment:
Q  228 cgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcat 286  Q
    ||||||| ||||| ||||||||||||| |   | |||||||||||||||||||||||||    
T  31961086 cgatagcagaaacctgatagcaggtggcccaatggatcttggagaggctctgatatcat 31961028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 34345572 - 34345518
Alignment:
Q  117 gtttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||||| ||||||||||||||| ||||||| |||| | ||||||| |||||||    
T  34345572 gtttggttcgtggacataaatgataagtggtccgataactgaaacctgatagcag 34345518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 6237617 - 6237662
Alignment:
Q  118 tttggtttgtggacataaatgatgagtggtctgatagcggaaacct 163  Q
    ||||||| ||||||||||||| || |||||| ||||||||||||||    
T  6237617 tttggttcgtggacataaatggtgggtggtccgatagcggaaacct 6237662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 295
Target Start/End: Original strand, 2736318 - 2736410
Alignment:
Q  204 cgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttgga-gaggctctgatatcatcttagaaat 295  Q
    ||||| |||||||| || || |||||||| ||||||| | ||||||||||| |   ||||||||| |  ||||||||||||||| ||||||||    
T  2736318 cgtggacataaatgatgggtggtccgataacggaaacctaatagcaggtggcccaatagatcttgaatcaggctctgatatcattttagaaat 2736410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 3680156 - 3680088
Alignment:
Q  227 ccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||||||||| | ||||||||||  | | | ||| ||||||||| ||||||| ||||||||||||    
T  3680156 ccgatagcggaaacctaatagcaggtgacccgatggattttggagagggtctgataccatcttagaaat 3680088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 3680185 - 3680133
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||||||||||||||||| ||  ||  | ||||||||||||||||||||||    
T  3680185 ttggtttgtggacataaatggtggatgacccgatagcggaaacctaatagcag 3680133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 6400766 - 6400818
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||||| |||||| ||||||| |||||||    
T  6400766 ttggttcgtggacataaatggtgggtggtccgatagcagaaacctgatagcag 6400818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 17147806 - 17147858
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||  |||||||||||||||| |||||||    
T  17147806 ttggttcgtggacataaatggtgggtgacctgatagcggaaacctgatagcag 17147858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 24554289 - 24554237
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| || |||||||||| || ||||||||||||||| ||||| |||||||    
T  24554289 ttggttcgttgacataaatggtgggtggtctgatagcggtaacctgatagcag 24554237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 2091 - 1992
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||||||| ||||||||||| ||    ||||||||||||| ||||| ||||||| |   | ||||||||||||||||||||| ||||||||||||    
T  2091 gcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaat 1992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 293
Target Start/End: Original strand, 35038338 - 35038434
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaa 293  Q
    |||| |||||||| ||||||||||| || | |||||||||||||| |||| |||||||| |   | |||||||||||||| |||||| ||||||||||    
T  35038338 gcttggttcgtggacataaatggtgggtgg-ccgatagcggaaacctgattgcaggtggcccaatggatcttggagaggcactgataccatcttagaa 35038434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 16239771 - 16239667
Alignment:
Q  192 ttgagcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttgga-gaggctctgatatcatctta 290  Q
    |||||||| |||||||| ||||||||||| || |  ||||| ||||||| ||||||||||||| |     ||||||||| |||||||||||| |||||||    
T  16239771 ttgagcttggttcgtggacataaatggtgggtggctcgataacggaaacctgatagcaggtggccaaacggatcttggaggaggctctgataccatctta 16239672  T
Q  291 gaaat 295  Q
    |||||    
T  16239671 gaaat 16239667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 20303299 - 20303393
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||| ||||||||||| || | ||||||| |||||| ||||||||||||| |   | ||| || |||||||||||||| ||| ||||||||    
T  20303299 gttcgtggacataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatggattttagagaggctctgataccatattagaaat 20303393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 45828185 - 45828095
Alignment:
Q  205 gtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| ||||||||||| || |  ||||||||||||| || ||||||||||     | ||||||||||||||||||||| ||||||||||||    
T  45828185 gtggacataaatggtgggtggctcgatagcggaaacctggtagcaggtggcgcaatggatcttggagaggctctgataccatcttagaaat 45828095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 20303213 - 20303265
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtg 253  Q
    |||||||| ||||||||||| || | |||||||||||||| ||||||||||||    
T  20303213 gttcgtggacataaatggtgggtggaccgatagcggaaacctgatagcaggtg 20303265  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 54568032 - 54567968
Alignment:
Q  231 tagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||||| |||||||||||||     | ||||||||||||||||||||| ||||||||||||    
T  54568032 tagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaat 54567968  T

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Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 295
Target Start/End: Original strand, 20327758 - 20327857
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| |||| ||| ||||||||||| || | |||||||||||||| ||||||||||||| |   | ||| || ||||||| |||||| ||| ||||||||    
T  20327758 gcttggttcctggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggattttagagaggcactgataccatattagaaat 20327857  T

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Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 21809063 - 21809106
Alignment:
Q  210 cataaatggtgagtagtccgatagcggaaacttgatagcaggtg 253  Q
    |||||||| || ||||||||||||||||||| ||||||||||||    
T  21809063 cataaatgatgggtagtccgatagcggaaacctgatagcaggtg 21809106  T

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Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 282
Target Start/End: Original strand, 19954361 - 19954447
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgata 282  Q
    |||| |||||||| ||||||||||| || ||| ||||||| |||| ||||||||| ||| |   | ||||||| |||||||||||||    
T  19954361 gcttggttcgtggacataaatggtgggtggtcagatagcgaaaacctgatagcagatggcccaatggatcttgaagaggctctgata 19954447  T

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Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 290
Target Start/End: Complemental strand, 34992781 - 34992687
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatctta 290  Q
    |||| |||||||| ||||||||||| ||   |||| ||||||||| ||||||||||||| |   | || ||||||||| |||||||| |||||||    
T  34992781 gcttggttcgtggacataaatggtgggtgacccgacagcggaaacctgatagcaggtggcccaatggaccttggagagactctgataccatctta 34992687  T

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Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 19954363 - 19954416
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcaga 172  Q
    |||||| ||||||||||||| || |||||| ||||||| |||||| ||||||||    
T  19954363 ttggttcgtggacataaatggtgggtggtcagatagcgaaaacctgatagcaga 19954416  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 39269244 - 39269159
Alignment:
Q  201 gttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcat 286  Q
    |||||||| ||||||||||| || |||||||| |||  || ||||||||||||| |   | |||| ||||||||| ||||||||||    
T  39269244 gttcgtggacataaatggtgggtggtccgataacggccacctgatagcaggtggcccaatggatcatggagaggccctgatatcat 39269159  T

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Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 20303210 - 20303262
Alignment:
Q  119 ttggtttgtggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    |||||| ||||||||||||| || |||| | |||||||||||||| |||||||    
T  20303210 ttggttcgtggacataaatggtgggtggaccgatagcggaaacctgatagcag 20303262  T

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Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 21809059 - 21809103
Alignment:
Q  127 tggacataaatgatgagtggtctgatagcggaaacctaatagcag 171  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||    
T  21809059 tggacataaatgatgggtagtccgatagcggaaacctgatagcag 21809103  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 21888565 - 21888525
Alignment:
Q  211 ataaatggtgagtagtccgatagcggaaacttgatagcagg 251  Q
    |||||||||| || |||||||||||||||| ||||||||||    
T  21888565 ataaatggtgggtggtccgatagcggaaacctgatagcagg 21888525  T

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Target: scaffold0400 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 3989 - 3921
Alignment:
Q  227 ccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||||||||| ||||||||||||| |  || ||||||||||||| ||||||| ||| ||||||||    
T  3989 ccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaat 3921  T

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Target: scaffold0365 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 4633 - 4565
Alignment:
Q  227 ccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||||||||||||| ||||||||||||| |  || ||||||||||||| ||||||| ||| ||||||||    
T  4633 ccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaat 4565  T

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Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 295
Target Start/End: Complemental strand, 5830 - 5731
Alignment:
Q  196 gcttagttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaat 295  Q
    |||| ||||||||||||||| |||| ||  | ||||| ||||||| ||||||||||||| |   | ||| ||| ||||||||||||| ||||||||||||    
T  5830 gcttggttcgtgggcataaacggtgggtgattcgataacggaaacctgatagcaggtggcccaatggattttgaagaggctctgataccatcttagaaat 5731  T

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Target: scaffold0129 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 294
Target Start/End: Complemental strand, 14472 - 14380
Alignment:
Q  202 ttcgtgggcataaatggtgagtagtccgatagcggaaacttgatagcaggtggtctggtagatcttggagaggctctgatatcatcttagaaa 294  Q
    ||||||| ||||||||||  || | |||||||||||||| ||||| ||  ||| |   | ||||||||||||||||||||| |||||||||||    
T  14472 ttcgtggacataaatggtaggtggcccgatagcggaaacctgataacatatggcccaatggatcttggagaggctctgataccatcttagaaa 14380  T

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Target: scaffold0048 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 295
Target Start/End: Complemental strand, 81951 - 81918
Alignment:
Q  262 gatcttggagaggctctgatatcatcttagaaat 295  Q
    ||||||||||||||||||||| ||||||||||||    
T  81951 gatcttggagaggctctgataccatcttagaaat 81918  T

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