View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7794_low_19 (Length: 283)
Name: NF7794_low_19
Description: NF7794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7794_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 15 - 261
Target Start/End: Complemental strand, 42218004 - 42217757
Alignment:
| Q |
15 |
agcagagaaactgcaaggtacatgaacgctaattttgctaggcttaaaaaggtgacatttctgacatgaagggacaaattaattctccaataataattat |
114 |
Q |
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| T |
42218004 |
agcagagaaactgcaaggtacatgaacactaattttgctaggcttaaaaaggtgacatttctgacatgaagggacaaattaattctccaataataattat |
42217905 |
T |
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| Q |
115 |
gattatgcat-atatccaatattgtggaatttaattgaatgcagaggaggagaatgtggtatctgtgtttccaaatacataccataaactacacacaaca |
213 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42217904 |
gattatgcattatatccaatattgtggaatttaattgaatgcagaggaggagaatgtggtatctgtgtttccaaatacataccataaactacacacaaca |
42217805 |
T |
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| Q |
214 |
aggtcatgggatttcttaggaatgcccctaaaggtgaagagaaatccc |
261 |
Q |
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| T |
42217804 |
aggtcatgggatttcttaggaatgcccctaaaggtgaagagaaatccc |
42217757 |
T |
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