View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7794_low_20 (Length: 277)
Name: NF7794_low_20
Description: NF7794
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7794_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 266
Target Start/End: Complemental strand, 34791384 - 34791136
Alignment:
| Q |
19 |
acattcctctcttcttaacactctcctcaagtcctcaactacaaacaatttctacacgcacactctcatttcaacc-atgccttcttcaaagcatagcag |
117 |
Q |
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| T |
34791384 |
acattcctctcttcttaacactcacctcaagtcctcaactacaaacaatttctacacgcacactctcatttcaacccatgccttcttcaaagcatagcag |
34791285 |
T |
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| Q |
118 |
tagcagcagtaagaagcaatcatcaaaatccaaatcaaggttacaatcgtcaattccagatgccgcctccactccaccacgcaccaccaccattcaactc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34791284 |
tagcagcagtaagaagcaatcatcaaaatccaaatcaaggttacaatcgtcaattccagatgccgcctccactccaccacgcaccaccaccattcaactc |
34791185 |
T |
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| Q |
218 |
gactctctcgtccaacatgcttctcgaatcttcccttctttcatctcac |
266 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||| |||| |
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| T |
34791184 |
gactctctcctccaacatgcttctcgaatcttcccttctttcatttcac |
34791136 |
T |
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