View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7799_low_10 (Length: 361)

Name: NF7799_low_10
Description: NF7799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7799_low_10
NF7799_low_10
[»] chr2 (36 HSPs)
chr2 (189-346)||(448467-448622)
chr2 (19-95)||(9706957-9707033)
chr2 (17-95)||(14541499-14541577)
chr2 (20-109)||(13215564-13215653)
chr2 (19-102)||(13754126-13754208)
chr2 (20-95)||(43077463-43077538)
chr2 (19-73)||(13000930-13000984)
chr2 (20-74)||(34884556-34884610)
chr2 (19-92)||(35158351-35158424)
chr2 (19-95)||(32543784-32543860)
chr2 (19-95)||(44360603-44360679)
chr2 (20-95)||(13849712-13849787)
chr2 (20-95)||(37116600-37116675)
chr2 (21-95)||(7529701-7529775)
chr2 (20-102)||(25186820-25186902)
chr2 (19-109)||(31011701-31011791)
chr2 (19-95)||(3376274-3376350)
chr2 (42-95)||(8443871-8443924)
chr2 (42-95)||(13965800-13965853)
chr2 (19-96)||(14295753-14295830)
chr2 (19-108)||(26342750-26342839)
chr2 (19-95)||(3363754-3363830)
chr2 (23-95)||(4952693-4952765)
chr2 (20-92)||(9370145-9370217)
chr2 (25-122)||(10812375-10812474)
chr2 (19-95)||(34262819-34262895)
chr2 (19-95)||(34399372-34399448)
chr2 (19-74)||(25558204-25558259)
chr2 (19-92)||(14308563-14308636)
chr2 (20-69)||(29042118-29042167)
chr2 (19-108)||(41885795-41885884)
chr2 (19-95)||(15182998-15183074)
chr2 (19-95)||(15893577-15893653)
chr2 (19-95)||(30264599-30264675)
chr2 (19-95)||(36375743-36375819)
chr2 (19-95)||(38072229-38072305)
[»] chr7 (34 HSPs)
chr7 (17-95)||(33258049-33258127)
chr7 (17-91)||(35112597-35112671)
chr7 (19-108)||(47408283-47408372)
chr7 (19-95)||(28608764-28608840)
chr7 (20-95)||(42841863-42841938)
chr7 (19-95)||(10227426-10227502)
chr7 (19-95)||(19327788-19327864)
chr7 (20-95)||(31815066-31815140)
chr7 (25-99)||(3838038-3838112)
chr7 (19-91)||(36298175-36298247)
chr7 (20-95)||(18194211-18194286)
chr7 (20-95)||(35746642-35746717)
chr7 (21-94)||(24233706-24233779)
chr7 (19-95)||(26724094-26724171)
chr7 (34-95)||(41888991-41889052)
chr7 (24-95)||(24283754-24283825)
chr7 (20-99)||(41408785-41408864)
chr7 (19-97)||(36340556-36340634)
chr7 (21-95)||(43874080-43874154)
chr7 (25-91)||(44820608-44820674)
chr7 (34-95)||(30866733-30866794)
chr7 (19-95)||(8381996-8382072)
chr7 (19-95)||(22950815-22950891)
chr7 (40-108)||(47459829-47459897)
chr7 (20-95)||(3310377-3310451)
chr7 (28-95)||(17896488-17896555)
chr7 (20-95)||(34368657-34368731)
chr7 (25-92)||(35683212-35683279)
chr7 (20-99)||(41409861-41409940)
chr7 (19-95)||(7312787-7312863)
chr7 (19-91)||(32528329-32528401)
chr7 (19-95)||(33173977-33174053)
chr7 (19-71)||(36648026-36648078)
chr7 (19-95)||(42881119-42881194)
[»] chr3 (38 HSPs)
chr3 (17-95)||(48152153-48152231)
chr3 (17-95)||(48214223-48214301)
chr3 (20-99)||(3643192-3643271)
chr3 (20-95)||(33874546-33874621)
chr3 (20-94)||(51065054-51065128)
chr3 (19-95)||(35315302-35315378)
chr3 (20-99)||(32853356-32853435)
chr3 (20-109)||(20848710-20848799)
chr3 (19-95)||(41425799-41425875)
chr3 (27-95)||(45145306-45145374)
chr3 (19-74)||(29458224-29458279)
chr3 (24-95)||(47104155-47104226)
chr3 (17-67)||(55141504-55141554)
chr3 (19-96)||(24063-24140)
chr3 (19-91)||(17102924-17102996)
chr3 (19-95)||(32980810-32980886)
chr3 (19-95)||(33074278-33074354)
chr3 (43-107)||(44543719-44543783)
chr3 (19-102)||(45055357-45055440)
chr3 (19-92)||(39866852-39866925)
chr3 (19-108)||(41351181-41351270)
chr3 (19-95)||(2858577-2858653)
chr3 (19-95)||(27992410-27992486)
chr3 (19-71)||(40139858-40139910)
chr3 (19-71)||(40318952-40319004)
chr3 (19-91)||(52663612-52663684)
chr3 (45-108)||(51219080-51219143)
chr3 (45-95)||(45513318-45513368)
chr3 (19-109)||(47069843-47069933)
chr3 (19-96)||(3114389-3114465)
chr3 (19-108)||(53745269-53745358)
chr3 (19-95)||(790720-790796)
chr3 (19-95)||(27483788-27483864)
chr3 (19-95)||(29698161-29698237)
chr3 (19-95)||(34266440-34266516)
chr3 (31-95)||(41926863-41926926)
chr3 (20-95)||(42515174-42515247)
chr3 (19-95)||(54898086-54898162)
[»] chr1 (58 HSPs)
chr1 (17-95)||(32348146-32348223)
chr1 (19-96)||(30702280-30702357)
chr1 (19-95)||(10506981-10507057)
chr1 (20-97)||(42800277-42800354)
chr1 (19-95)||(9127839-9127915)
chr1 (19-95)||(31487770-31487846)
chr1 (19-95)||(35700366-35700442)
chr1 (19-95)||(36850807-36850883)
chr1 (19-95)||(46096716-46096792)
chr1 (19-95)||(51974162-51974238)
chr1 (19-95)||(52649720-52649796)
chr1 (20-95)||(5598216-5598291)
chr1 (225-299)||(4775398-4775472)
chr1 (17-91)||(18344494-18344568)
chr1 (17-95)||(35605766-35605844)
chr1 (19-92)||(32994463-32994536)
chr1 (19-95)||(36318522-36318598)
chr1 (20-95)||(12721611-12721686)
chr1 (20-95)||(32168303-32168378)
chr1 (20-95)||(48174664-48174738)
chr1 (19-95)||(19929457-19929533)
chr1 (19-91)||(40926748-40926820)
chr1 (20-95)||(4100900-4100975)
chr1 (20-95)||(37735130-37735205)
chr1 (20-95)||(51613582-51613657)
chr1 (34-91)||(1039067-1039124)
chr1 (34-91)||(1045973-1046030)
chr1 (19-108)||(20605602-20605691)
chr1 (19-99)||(2059799-2059879)
chr1 (19-95)||(13507940-13508016)
chr1 (19-95)||(13515128-13515204)
chr1 (19-95)||(37437044-37437120)
chr1 (19-94)||(1677368-1677443)
chr1 (24-71)||(17013601-17013648)
chr1 (19-74)||(19455412-19455466)
chr1 (20-95)||(43809075-43809150)
chr1 (24-70)||(31570653-31570699)
chr1 (58-95)||(1427888-1427925)
chr1 (19-108)||(29830923-29831012)
chr1 (19-108)||(35531273-35531362)
chr1 (24-69)||(37296745-37296790)
chr1 (19-107)||(8464236-8464324)
chr1 (19-95)||(10676072-10676148)
chr1 (19-95)||(13566849-13566925)
chr1 (19-95)||(39412502-39412578)
chr1 (19-95)||(43500676-43500752)
chr1 (19-91)||(51972276-51972348)
chr1 (19-109)||(30686581-30686671)
chr1 (45-95)||(42787144-42787194)
chr1 (33-94)||(1038271-1038332)
chr1 (33-94)||(1045177-1045238)
chr1 (34-95)||(9362158-9362219)
chr1 (19-92)||(35255656-35255729)
chr1 (19-92)||(38648627-38648700)
chr1 (19-92)||(48508303-48508376)
chr1 (19-95)||(1024726-1024802)
chr1 (19-95)||(12231062-12231138)
chr1 (19-95)||(19349370-19349446)
[»] chr8 (50 HSPs)
chr8 (18-95)||(23855726-23855803)
chr8 (19-108)||(14061130-14061219)
chr8 (26-100)||(29091074-29091148)
chr8 (17-95)||(35029714-35029792)
chr8 (20-93)||(27911668-27911741)
chr8 (20-93)||(27958087-27958160)
chr8 (19-95)||(18842699-18842775)
chr8 (17-95)||(167471-167550)
chr8 (20-95)||(26740131-26740206)
chr8 (19-95)||(1245482-1245558)
chr8 (19-95)||(8554010-8554086)
chr8 (19-95)||(12248764-12248840)
chr8 (19-95)||(31964739-31964815)
chr8 (20-102)||(8672665-8672747)
chr8 (19-108)||(2888449-2888538)
chr8 (19-95)||(17074576-17074652)
chr8 (19-95)||(17573618-17573694)
chr8 (19-91)||(41643488-41643560)
chr8 (19-95)||(43641983-43642059)
chr8 (19-73)||(43553209-43553263)
chr8 (19-99)||(26062877-26062957)
chr8 (19-95)||(33935054-33935130)
chr8 (40-95)||(1739884-1739939)
chr8 (25-92)||(11707451-11707518)
chr8 (20-91)||(14511428-14511499)
chr8 (20-95)||(23793265-23793344)
chr8 (19-95)||(7605894-7605969)
chr8 (19-95)||(8453230-8453306)
chr8 (19-95)||(11994051-11994127)
chr8 (19-99)||(23430079-23430159)
chr8 (19-95)||(23848550-23848626)
chr8 (19-95)||(34981999-34982075)
chr8 (32-72)||(35052305-35052345)
chr8 (20-95)||(3720851-3720926)
chr8 (34-109)||(6757591-6757666)
chr8 (19-102)||(32010071-32010154)
chr8 (19-74)||(39303531-39303586)
chr8 (19-97)||(6661123-6661201)
chr8 (19-97)||(6741525-6741603)
chr8 (19-92)||(10180540-10180613)
chr8 (34-95)||(13174114-13174175)
chr8 (19-108)||(15596514-15596603)
chr8 (19-108)||(18291633-18291722)
chr8 (19-92)||(39663948-39664021)
chr8 (34-95)||(41701476-41701537)
chr8 (19-95)||(12342608-12342684)
chr8 (19-95)||(13328140-13328216)
chr8 (19-95)||(35052223-35052299)
chr8 (19-95)||(38482786-38482862)
chr8 (19-107)||(40228465-40228553)
[»] scaffold0343 (1 HSPs)
scaffold0343 (20-95)||(7595-7670)
[»] chr5 (69 HSPs)
chr5 (20-95)||(12722950-12723025)
chr5 (20-95)||(5842984-5843059)
chr5 (20-95)||(12784434-12784509)
chr5 (20-95)||(13703250-13703325)
chr5 (20-93)||(12637940-12638013)
chr5 (19-95)||(7408483-7408559)
chr5 (19-91)||(9958878-9958950)
chr5 (17-109)||(18437300-18437392)
chr5 (20-108)||(31803477-31803565)
chr5 (20-95)||(6008037-6008113)
chr5 (19-95)||(26906642-26906718)
chr5 (19-95)||(28024250-28024326)
chr5 (20-94)||(37633829-37633903)
chr5 (19-108)||(4017566-4017655)
chr5 (19-96)||(6330973-6331050)
chr5 (19-91)||(3243948-3244020)
chr5 (19-95)||(6689751-6689827)
chr5 (19-95)||(8825209-8825285)
chr5 (19-95)||(14793781-14793857)
chr5 (20-92)||(37306693-37306765)
chr5 (20-95)||(39893800-39893875)
chr5 (19-73)||(23418698-23418752)
chr5 (20-94)||(37809912-37809986)
chr5 (34-95)||(13461177-13461238)
chr5 (21-102)||(24229102-24229183)
chr5 (19-92)||(25027569-25027642)
chr5 (19-92)||(28446979-28447052)
chr5 (20-92)||(3892965-3893036)
chr5 (19-95)||(5119330-5119406)
chr5 (19-91)||(24074833-24074905)
chr5 (19-95)||(34261464-34261540)
chr5 (19-95)||(38297516-38297592)
chr5 (19-95)||(42911702-42911778)
chr5 (19-74)||(31546011-31546066)
chr5 (19-93)||(2133901-2133973)
chr5 (20-94)||(7466335-7466409)
chr5 (34-95)||(425291-425351)
chr5 (19-108)||(3686842-3686931)
chr5 (19-95)||(4427396-4427473)
chr5 (19-92)||(31985044-31985117)
chr5 (20-89)||(32389139-32389208)
chr5 (19-95)||(4175471-4175547)
chr5 (19-95)||(4985166-4985242)
chr5 (42-102)||(6754163-6754223)
chr5 (40-108)||(7734762-7734830)
chr5 (19-95)||(8229795-8229870)
chr5 (19-95)||(9076223-9076299)
chr5 (19-95)||(12665010-12665086)
chr5 (19-95)||(26854086-26854162)
chr5 (19-91)||(36239610-36239682)
chr5 (19-95)||(36481227-36481303)
chr5 (19-102)||(10359219-10359302)
chr5 (25-99)||(18465855-18465929)
chr5 (19-109)||(22582624-22582713)
chr5 (19-92)||(4098483-4098556)
chr5 (19-92)||(7834059-7834132)
chr5 (19-108)||(16124238-16124327)
chr5 (19-68)||(19831560-19831609)
chr5 (34-74)||(1795129-1795169)
chr5 (19-95)||(2673969-2674045)
chr5 (19-95)||(4440241-4440317)
chr5 (19-95)||(6072604-6072680)
chr5 (45-109)||(18794961-18795025)
chr5 (19-95)||(25344112-25344188)
chr5 (19-71)||(30368150-30368202)
chr5 (19-95)||(38308117-38308193)
chr5 (19-95)||(38910425-38910501)
chr5 (19-95)||(39073196-39073272)
chr5 (19-91)||(40198940-40199012)
[»] chr4 (58 HSPs)
chr4 (19-100)||(47596603-47596684)
chr4 (19-95)||(54231712-54231788)
chr4 (17-74)||(52057467-52057524)
chr4 (19-95)||(45725709-45725785)
chr4 (20-95)||(33809261-33809336)
chr4 (19-95)||(53467546-53467623)
chr4 (24-96)||(20087349-20087420)
chr4 (19-95)||(23719779-23719855)
chr4 (19-99)||(31984143-31984223)
chr4 (22-110)||(42629493-42629581)
chr4 (19-95)||(52061731-52061807)
chr4 (19-92)||(18135048-18135122)
chr4 (19-92)||(49122258-49122332)
chr4 (20-109)||(9220022-9220111)
chr4 (19-95)||(38542271-38542347)
chr4 (20-95)||(3036557-3036632)
chr4 (42-109)||(36659408-36659475)
chr4 (19-74)||(37502195-37502250)
chr4 (20-95)||(49089080-49089155)
chr4 (19-73)||(26933789-26933843)
chr4 (19-92)||(44176587-44176660)
chr4 (19-91)||(3436066-3436138)
chr4 (19-90)||(44549816-44549887)
chr4 (22-92)||(36292792-36292862)
chr4 (19-92)||(5374348-5374421)
chr4 (19-88)||(18781652-18781721)
chr4 (19-108)||(22828383-22828472)
chr4 (20-69)||(42133211-42133260)
chr4 (42-99)||(52677157-52677214)
chr4 (19-95)||(6195197-6195273)
chr4 (24-72)||(31369979-31370027)
chr4 (19-95)||(35231863-35231939)
chr4 (19-95)||(39683709-39683785)
chr4 (20-68)||(41955707-41955755)
chr4 (19-95)||(44217879-44217955)
chr4 (19-95)||(47751703-47751779)
chr4 (19-95)||(55703093-55703169)
chr4 (19-74)||(16664414-16664469)
chr4 (21-92)||(27654742-27654813)
chr4 (20-67)||(34361229-34361276)
chr4 (19-74)||(42513042-42513097)
chr4 (20-95)||(43888156-43888230)
chr4 (19-74)||(47885003-47885058)
chr4 (19-109)||(12252265-12252355)
chr4 (25-95)||(31861981-31862051)
chr4 (20-66)||(53691678-53691724)
chr4 (19-92)||(44069204-44069277)
chr4 (34-95)||(55935295-55935356)
chr4 (19-95)||(8735562-8735638)
chr4 (19-95)||(19093148-19093224)
chr4 (19-95)||(19527215-19527291)
chr4 (19-91)||(29295527-29295599)
chr4 (21-69)||(30151847-30151895)
chr4 (20-108)||(30939329-30939417)
chr4 (19-91)||(42099881-42099953)
chr4 (19-95)||(46872094-46872170)
chr4 (19-71)||(50623586-50623638)
chr4 (34-74)||(52977945-52977985)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-108)||(147109-147197)
[»] chr6 (34 HSPs)
chr6 (19-95)||(9838117-9838193)
chr6 (20-95)||(11129002-11129077)
chr6 (19-95)||(30416070-30416146)
chr6 (20-99)||(11676606-11676685)
chr6 (20-95)||(24949278-24949353)
chr6 (19-95)||(23777466-23777542)
chr6 (19-95)||(26485680-26485756)
chr6 (19-95)||(7632032-7632108)
chr6 (19-95)||(22050218-22050294)
chr6 (19-95)||(26470718-26470794)
chr6 (20-95)||(7170323-7170398)
chr6 (19-93)||(7056137-7056211)
chr6 (24-102)||(19645710-19645788)
chr6 (21-95)||(34730732-34730805)
chr6 (19-91)||(8176603-8176675)
chr6 (19-99)||(17123976-17124056)
chr6 (20-95)||(17251250-17251326)
chr6 (24-72)||(22400582-22400630)
chr6 (19-95)||(30388936-30389012)
chr6 (18-52)||(7235609-7235643)
chr6 (21-95)||(34607270-34607344)
chr6 (19-92)||(17601131-17601204)
chr6 (23-92)||(24356052-24356121)
chr6 (19-95)||(3621760-3621836)
chr6 (19-71)||(11431176-11431228)
chr6 (19-95)||(22784663-22784739)
chr6 (20-108)||(31244731-31244819)
chr6 (34-95)||(30237425-30237485)
chr6 (19-95)||(1135176-1135252)
chr6 (19-95)||(1249709-1249785)
chr6 (19-91)||(1751430-1751502)
chr6 (28-108)||(23923695-23923775)
chr6 (19-95)||(24663549-24663625)
chr6 (20-95)||(33260871-33260951)
[»] scaffold2146 (1 HSPs)
scaffold2146 (19-95)||(722-798)
[»] scaffold0135 (1 HSPs)
scaffold0135 (20-109)||(30673-30762)
[»] scaffold0001 (1 HSPs)
scaffold0001 (19-92)||(419490-419563)
[»] scaffold0325 (1 HSPs)
scaffold0325 (20-95)||(486-561)
[»] scaffold0274 (1 HSPs)
scaffold0274 (21-95)||(235-308)
[»] scaffold0280 (1 HSPs)
scaffold0280 (19-108)||(8324-8413)
[»] scaffold0024 (1 HSPs)
scaffold0024 (19-109)||(49316-49406)
[»] scaffold0007 (1 HSPs)
scaffold0007 (19-71)||(77258-77310)


Alignment Details
Target: chr2 (Bit Score: 107; Significance: 1e-53; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 189 - 346
Target Start/End: Original strand, 448467 - 448622
Alignment:
Q  189 tcagttaattttgta---ttttgtcaattcaatatatttacatttgtgtagccatatatacatggaatacaatgatgaatattgttgaaatcatggaaca 285  Q
    |||||||||||||||   |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  448467 tcagttaattttgtagtattttgttaattcaatatatttacatttgtgtagccatatatacatggaatacaatgatgaatattgctcaaatcatggaaca 448566  T
Q  286 gtcaactatactatttggctaattactacagtataagatatgatttccatttactgatatt 346  Q
    ||||||||||||| ||||||| ||||     ||||||||||||||||||||||||||||||    
T  448567 gtcaactatactaattggctagttac-----tataagatatgatttccatttactgatatt 448622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 9706957 - 9707033
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||||||||||    
T  9706957 tattgtatcaaaagtagtaatatttattgattgtattggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 9707033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 14541499 - 14541577
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||| |||||||||||||    
T  14541499 agtatcgtatcaaaagtagtaatatttattgattgtattggtttgtataaaatgtcaaaaagtgacaattaaaaaggaa 14541577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 13215564 - 13215653
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||| || | | ||||||||||||| ||| || ||||||    
T  13215564 attgtatcaaaagtagtaacatttattgagtgtattggtttgtgtaaaatgtcaaaaagtaacaattaaaaaggaacggaggtagtatta 13215653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 13754126 - 13754208
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagt 102  Q
    |||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||| || ||| ||||||||||||| ||||||    
T  13754126 tattgtatcaaaagtagtaacatttaatgattgtcttggtttgtgtaaaatgtcaa-aagtgacaattaaaaaggaacggaagt 13754208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 43077463 - 43077538
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||| ||| | ||||||||||| ||| |||||||||||||| || |||||| |||||||||||||    
T  43077463 attgtatcaaaagtaataacacttattgattgtcttggtttgtgtaaaatgttaaaaaatgacaattaaaaaggaa 43077538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 13000984 - 13000930
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtca 73  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||||||||||    
T  13000984 tattgtatcaaaagtagtaacatttattgattgtcttaatttgtgtaaaatgtca 13000930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 34884610 - 34884556
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    ||||||||||||||||||||||||||||||| | ||| |||||||||||||||||    
T  34884610 attgtatcaaaagtagtaatatttattgattatcttggtttgtgtaaaatgtcaa 34884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 35158424 - 35158351
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||||||||||||||||||||||| ||| ||| ||  ||||||||||||| || ||| ||||||||||    
T  35158424 tattgtatcaaaagtagtaatatttattgaatgtcttggttcatgtaaaatgtcaaaaagtgacaattaaaaag 35158351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 32543860 - 32543784
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||| |||| |||||||||||||||||||| ||| ||| |||||||||| |  |||||| |||||||||||||    
T  32543860 tattgtataaaaattagtaatatttattgattgttttggtttatgtaaaatgttataaaatgacaattaaaaaggaa 32543784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 44360603 - 44360679
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  44360603 tattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 44360679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 13849787 - 13849712
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||| || ||||||||||||||||| ||| ||| | |||||| |||| |||||| |||||||||||||    
T  13849787 attgtatcaaaactaataatatttattgattgttttggtttatataaaatatcaaaaaatgacaattaaaaaggaa 13849712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 37116675 - 37116600
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||| |||||| |||||||| |||| ||| ||||||||||||||||   ||||| |||||||||||||    
T  37116675 attgtatcaaaaatagtaacatttattggttgtcttggtttgtgtaaaatgtcagagaatgacaattaaaaaggaa 37116600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 7529775 - 7529701
Alignment:
Q  21 ttgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||| |||||||  |||| || |||||||||||| | ||| |||||| |||||||||||||    
T  7529775 ttgtatcaaaagtagtaaaatttattagttgtcttcatttgtgtaaaaagacaaaaaatgacaattaaaaaggaa 7529701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 25186902 - 25186820
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagt 102  Q
    ||||||||||||||||||| || |||||||| | ||| ||||||||||||||||| || |||   ||||||||||| ||||||    
T  25186902 attgtatcaaaagtagtaacatatattgattatcttggtttgtgtaaaatgtcaaaaagtgacggttaaaaaggaacggaagt 25186820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 31011791 - 31011701
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||||||||||||||| || ||||||||||||| ||| ||||| ||||||||||| |  | | ||||||||||||| ||| || ||||||    
T  31011791 tattgtatcaaaagtagcaacatttattgattgtcttggtttgtataaaatgtcaaaatgtaacaattaaaaaggaacggaggtagtatta 31011701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 3376350 - 3376274
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||| ||| ||||||||||  | ||||||||||| ||||||||||||||||||||| |  ||| |||||||||||||    
T  3376350 tattatattaaaagtagtatcaattattgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 3376274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 8443871 - 8443924
Alignment:
Q  42 ttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||| ||| ||||||||||||||||| || ||| |||||||||||||    
T  8443871 ttattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 8443924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 13965800 - 13965853
Alignment:
Q  42 ttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||| ||| ||||||||||||||||| || ||| |||||||||||||    
T  13965800 ttattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 13965853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 14295830 - 14295753
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaat 96  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| ||||||||||||||    
T  14295830 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaat 14295753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 26342750 - 26342839
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| ||||||||||||| ||| || |||||    
T  26342750 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaacgtgacaattaaaaaggaacggaggtagtatt 26342839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 3363754 - 3363830
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | ||||||||||| ||| ||||||||||||||||| |   || |||||||||||||    
T  3363754 tattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgcgacaattaaaaaggaa 3363830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 4952765 - 4952693
Alignment:
Q  23 gtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||| ||||||||||| ||||||||||  | ||| ||| ||||||||||||| || ||| |||||||||||||    
T  4952765 gtattaaaagtagtaacatttattgatcattttggtttatgtaaaatgtcaaaaagtgacaattaaaaaggaa 4952693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 9370145 - 9370217
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||||||||||||||||| | ||||| || || ||| ||| ||||||||||||| || ||| ||||||||||    
T  9370145 attgtatcaaaagtagtaacacttattaatggtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaag 9370217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 10812375 - 10812474
Alignment:
Q  25 atcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgta--ttacataacaattttt 122  Q
    |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| ||||||||||||| ||| || |||  ||||| ||||||||||    
T  10812375 atcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtatgttacaaaacaattttt 10812474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 34262895 - 34262819
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||| ||||||||||||||| | ||||||| ||| ||| |||||||||||| | || || ||| |||||||||||||    
T  34262895 tattatatcaaaagtagtaacaattattgaatgtcttggtttgtgtaaaatataaaaaattgacaattaaaaaggaa 34262819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 34399372 - 34399448
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| |||||||||| |||||| |  |||||||||||||||||    
T  34399372 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaagtgtcaaaatgtgataattaaaaaggaa 34399448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 25558259 - 25558204
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    |||||||||||||||||||  | || |||||||| ||| |||||||||||||||||    
T  25558259 tattgtatcaaaagtagtatcaatttttgattgtcttggtttgtgtaaaatgtcaa 25558204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 14308563 - 14308636
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| ||||||||||    
T  14308563 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaag 14308636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 29042118 - 29042167
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaat 69  Q
    |||||||||||| |||||| ||||| ||||||| | ||||||||||||||    
T  29042118 attgtatcaaaaatagtaacatttactgattgtctcgatttgtgtaaaat 29042167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 41885795 - 41885884
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| ||| ||||||||| ||| || |||||    
T  41885795 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaatgaaaaaggaacggaggtagtatt 41885884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 15183074 - 15182998
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||| | ||| ||||||||||||||||| |  ||| |||||||||||||    
T  15183074 tattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 15182998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 15893653 - 15893577
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| |||||||||||| |||| |  ||| |||||||||||||    
T  15893653 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaa 15893577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 30264675 - 30264599
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| ||| ||||||||||||| |  ||| |||||||||||||    
T  30264675 tattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaa 30264599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 36375743 - 36375819
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||| ||||||  | || |||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  36375743 tattgcatcaaaggtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 36375819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 38072305 - 38072229
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| |||||||||||||| || | |||| || ||||||||||    
T  38072305 tattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatgttaaaatatgacaaataaaaaggaa 38072229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 33258049 - 33258127
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  33258049 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaa 33258127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 35112597 - 35112671
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || ||| |||||||||    
T  35112597 agtattgtatcaaaagtagtaatatttattgattgtatttgtttgtgtaaaatgtcaaaaagtgacaattaaaaa 35112671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 47408283 - 47408372
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    |||||||||||||||||||| ||||||||| ||| ||| ||||||||||||||||| || ||| ||||||||||||| ||| || |||||    
T  47408283 tattgtatcaaaagtagtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggaggtagtatt 47408372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 28608764 - 28608840
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||||||| |||| | |||| |||||||||||||    
T  28608764 tattgtatcaaaagtagcaacatttattgattgtcttgatttgtgtaaaatatcaaaatatgacaattaaaaaggaa 28608840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 42841938 - 42841863
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||| || ||| |||||||||||||    
T  42841938 attgtatcaaaagtagtaacatttattgattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaa 42841863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 10227426 - 10227502
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||||| |||| ||||||||||| |||||||||||||||||| || || ||| |||||||||||||    
T  10227426 tattgcatcaaaagtagaaataattattgattgtcttgatttgtgtaaaatgttaaaaagtgacaattaaaaaggaa 10227502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 19327864 - 19327788
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||| |||||||||||||||| ||| |||||||||||||| || |  ||| |||||||||||||    
T  19327864 tattgtatcaaaagtagcaatatttattgattgttttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaa 19327788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 31815140 - 31815066
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||| ||| ||||||| | |||||||||||||||||| || |||||| |||||||||||||    
T  31815140 attgtatcaaaagtagtaacatt-attgattatcttgatttgtgtaaaatgttaaaaaatgacaattaaaaaggaa 31815066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 3838038 - 3838112
Alignment:
Q  25 atcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    |||||||||| ||| | ||||||||||| |||||||| |||||||||||| || ||| |||||||||||||||||    
T  3838038 atcaaaagtaataacaattattgattgtcttgatttgcgtaaaatgtcaaaaagtgacaattaaaaaggaatgga 3838112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 36298247 - 36298175
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| |||||||||||||| | ||||||||||| ||||||||||||||||||||| |  ||| |||||||||    
T  36298247 tattgcatcaaaagtagtaacaattattgattgttttgatttgtgtaaaatgtcaaaatgtgacaattaaaaa 36298175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 18194286 - 18194211
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||  ||||||||||||| ||| |||||||||||| | || || ||| |||||||||||||    
T  18194286 attgtatcaaaagtagtatcatttattgattgtcttggtttgtgtaaaatttgaaaaactgacaattaaaaaggaa 18194211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 35746717 - 35746642
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||| |||||| ||||||||||||| || |||| |||||||||| || || ||| |||||||||||||    
T  35746717 attgtatcaaaaatagtaacatttattgattgtcttaatttatgtaaaatgttaaaaagtgacaattaaaaaggaa 35746642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 24233706 - 24233779
Alignment:
Q  21 ttgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagga 94  Q
    |||||| |||| ||||||| |||||||| ||| ||||||| |||||||||| || |||||| ||||||||||||    
T  24233706 ttgtattaaaattagtaatttttattgaatgtcttgatttttgtaaaatgttaaaaaatgacaattaaaaagga 24233779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 26724094 - 26724171
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataa-atgataattaaaaaggaa 95  Q
    ||||| |||||||||||||||| | ||||||||| ||| ||||||||||||||||| ||  ||| |||||||||||||    
T  26724094 tattgcatcaaaagtagtaataatcattgattgtcttggtttgtgtaaaatgtcaaaaatgtgacaattaaaaaggaa 26724171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 41889052 - 41888991
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||||||| ||| ||||||||||||||||  || |||||||||||||||||    
T  41889052 agtaacatttattgattgtcttggtttgtgtaaaatgtcacaaagtgataattaaaaaggaa 41888991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 24283754 - 24283825
Alignment:
Q  24 tatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||| ||||||| ||||| ||  ||||||||||| || || |||||| |||||||||||||    
T  24283754 tatcaaaagtagtaacatttattaattgtcttagtttgtgtaaaaggtaaaaaaatgacaattaaaaaggaa 24283825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 41408864 - 41408785
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    |||||||||||| || ||| ||||||| ||||| |||||||||||||||||  || || ||| ||||||||| |||||||    
T  41408864 attgtatcaaaattaataacatttattaattgtcttgatttgtgtaaaatgataaaaagtgacaattaaaaatgaatgga 41408785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 36340556 - 36340634
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatg 97  Q
    ||||||||| |||| || || ||||| ||||||| ||| |||||||||||||| || |||| | |||||||||||||||    
T  36340556 tattgtatcgaaaggagcaacatttactgattgtcttggtttgtgtaaaatgtaaaaaaataacaattaaaaaggaatg 36340634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 43874154 - 43874080
Alignment:
Q  21 ttgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||| ||||||||| ||||||  || |||||||||||||| ||  ||  ||||||||||||    
T  43874154 ttgtatcaaaagtagtaacatttattgaatgtatttgttcgtgtaaaatgtcaaaaagagaccattaaaaaggaa 43874080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 44820674 - 44820608
Alignment:
Q  25 atcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    |||||||||||||||| ||||||||||| ||| ||||| ||||||||||| | |||| | |||||||    
T  44820674 atcaaaagtagtaataattattgattgtcttggtttgtataaaatgtcaaaatatgacagttaaaaa 44820608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 30866794 - 30866733
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||| ||| ||| ||||||||||||||||| |||||| | |||||||||||    
T  30866794 agtaacatttattgagtgtcttggtttgtgtaaaatgtcaaaaaatgacagttaaaaaggaa 30866733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 8381996 - 8382072
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||| ||  | || |||||||| ||| ||||||||||||||||| |  |||||||||||||||||    
T  8381996 tattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaaaaggaa 8382072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 22950891 - 22950815
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||  | || || ||||| ||| ||||||||||||||||| | || | |||||||||||||    
T  22950891 tattgtatcaaaagtagtatcaattttttattgtcttggtttgtgtaaaatgtcaaaatataacaattaaaaaggaa 22950815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 47459829 - 47459897
Alignment:
Q  40 atttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||||||| ||| |||||||||||||||| |||| |||| | ||||||||||||| ||| || |||||    
T  47459829 atttattgaatgtcttgatttgtgtaaaatatcaaaaaataacaattaaaaaggaacggaggtagtatt 47459897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 3310377 - 3310451
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||| |||||||||| ||||||| ||||||||| ||| |||| |||||||||||| | |||| | |||||||||||    
T  3310377 attgcatcaaaagtaataatatt-attgattgtcttggtttgcgtaaaatgtcaaaatatgacagttaaaaaggaa 3310451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 17896555 - 17896488
Alignment:
Q  28 aaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||  | || |||||||| ||||||||||||||||||||| |  ||| |||||||||||||    
T  17896555 aaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 17896488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 34368731 - 34368657
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||| ||||||| ||| ||| | || ||||||||||||| |||| || ||| |||||||||||||    
T  34368731 attgtatcaaaagtaataatatt-attaattttcttaatttgtgtaaaatatcaaaaagtgacaattaaaaaggaa 34368657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 35683279 - 35683212
Alignment:
Q  25 atcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||| |||| |||||||||||| ||| | | ||||||||||||| |  ||||||||||||||    
T  35683279 atcaaaagtattaatttttattgattgttttggtgtatgtaaaatgtcaaaaggtgataattaaaaag 35683212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 41409940 - 41409861
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    |||||||||||| || ||| ||||||| ||||| |||||||||||||||||  || || ||| |||||| || |||||||    
T  41409940 attgtatcaaaattaataacatttattaattgtcttgatttgtgtaaaatgataaaaagtgacaattaagaatgaatgga 41409861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 7312787 - 7312863
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| |||||||||||||||| |||| |  ||| ||||| |||||||    
T  7312787 tattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatatcaaaatgtgacaattacaaaggaa 7312863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 32528401 - 32528329
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| ||||||||||| |  | || |||||||| ||||||||| ||||||||||| | |||| |||||||||    
T  32528401 tattgcatcaaaagtagcatcaattgttgattgtcttgatttgtataaaatgtcaaaatatgacaattaaaaa 32528329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 33173977 - 33174053
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| | | ||||| | | ||| ||| ||||||||||||| |  ||| |||||||||||||    
T  33173977 tattgtatcaaaagtagtaacaatcattgactattttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaa 33174053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 36648078 - 36648026
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgt 71  Q
    ||||| ||||||||||  |||| ||||||||||| ||| ||||||||||||||    
T  36648078 tattgcatcaaaagtaaaaataattattgattgtcttggtttgtgtaaaatgt 36648026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 42881119 - 42881194
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | ||||| ||||| ||| ||||| |||||| |||| |||| | |||||||||||||    
T  42881119 tattgcatcaaaagtagtaaaaattattaattgtcttggtttgtataaaatatcaa-aaataacaattaaaaaggaa 42881194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 48152153 - 48152231
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| | || |||||| |||||||||||||    
T  48152153 agtattgtatcaaaagtaataatatttattgattgtattgatttgtgtaaaatataaaaaaatgacaattaaaaaggaa 48152231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 48214223 - 48214301
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| || ||| |||||||||||||    
T  48214223 agtattgtatcaaaagtagtaatatttattgattgtattggtgtgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 48214301  T

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Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 3643271 - 3643192
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| || ||| | |||||||||||||||    
T  3643271 attgtatcaaaagtagtaacatttcttgattgtattgatttgtgtaaaatgtcaaaaagtgacacttaaaaaggaatgga 3643192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 33874621 - 33874546
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| |||||||||||||    
T  33874621 attgtatcaaaagtagtaacatttattgattgttttggtttgtgtaaaatgtcaaaaaatgacaattaaaaaggaa 33874546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 51065054 - 51065128
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagga 94  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||||||||| || || ||||||||||||||||    
T  51065054 attgtatcaaaagtagtaacatttattgattgtcttggtttgtgtaaaatgttaaaaagtgataattaaaaagga 51065128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 35315302 - 35315378
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | || |||||||| ||||||||||||||||||||| |||||| |||||||||||||    
T  35315302 tattgcatcaaaagtagtaacaattgttgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaa 35315378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 32853435 - 32853356
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    ||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||| || | | |||||||||||||||||    
T  32853435 attgtatcaaaagtagtaacatttattgattgtcttagtttgtgtaaaatgtcaaaaagttacaattaaaaaggaatgga 32853356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 20848799 - 20848710
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||||||||||||||||| ||||||||||| | ||| ||||||||||||||||| |  ||| | ||||||||||| ||| || ||||||    
T  20848799 attgtatcaaaagtagtaacatttattgattattttggtttgtgtaaaatgtcaaaatgtgacagttaaaaaggaacggaggtagtatta 20848710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 41425799 - 41425875
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||| || ||||||||||||| ||| |||||||||||||| || |  ||| |||||||||||||    
T  41425799 tattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaa 41425875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 45145306 - 45145374
Alignment:
Q  27 caaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||| ||||| ||||||||||| ||| |||||||||||| |||| |||||| |||||||||||||    
T  45145306 caaaagtaataataattattgattgtcttggtttgtgtaaaatatcaaaaaatgacaattaaaaaggaa 45145374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 29458279 - 29458224
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    ||||||||||||||||| || ||||||||||||| ||| |||||||||||||||||    
T  29458279 tattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgtcaa 29458224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 47104226 - 47104155
Alignment:
Q  24 tatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||| |||||| ||||||||||||| ||||||| ||||||||||||| || ||  |||||||||||||    
T  47104226 tatcaaaaatagtaacatttattgattgttttgatttatgtaaaatgtcaaaaagtggcaattaaaaaggaa 47104155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 55141554 - 55141504
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaa 67  Q
    |||||| |||||||| ||||||||||||||||||||||||||||| |||||    
T  55141554 agtattatatcaaaaatagtaatatttattgattgtattgatttgcgtaaa 55141504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 24140 - 24063
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaat 96  Q
    |||||||||||||||||||||||||||| | ||| ||| ||| ||||||||||||  || ||| | ||||||||||||    
T  24140 tattgtatcaaaagtagtaatatttattaaatgtcttggtttatgtaaaatgtcacaaagtgacacttaaaaaggaat 24063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 17102924 - 17102996
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| |||||||||||||| | ||||| ||||| || |||||||||||||||||| |||| | |||||||||    
T  17102924 tattgcatcaaaagtagtaacaattattaattgttttaatttgtgtaaaatgtcaaaaaataacaattaaaaa 17102996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 32980810 - 32980886
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||| ||| | ||||||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  32980810 tattgcatcaaaagtattaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 32980886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 33074354 - 33074278
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||| |  ||||||||||||| ||| ||||||||||||||||| |  ||| || ||||||||||    
T  33074354 tattgtatcaaaagtagcagcatttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaaataaaaaggaa 33074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 44543783 - 44543719
Alignment:
Q  43 tattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtat 107  Q
    |||||||| | ||| ||||||||||||||||| |||||| |||||||||| || |||||||||||    
T  44543783 tattgattatcttggtttgtgtaaaatgtcaaaaaatgacaattaaaaagtaacggaagttgtat 44543719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 45055357 - 45055440
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagt 102  Q
    ||||||||||||||||  |||| ||||||||||| ||||||| |||||||| | || || ||| ||||||||| ||| ||||||    
T  45055357 tattgtatcaaaagtaaaaataattattgattgtcttgatttatgtaaaatattaaaaattgacaattaaaaaagaacggaagt 45055440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 39866925 - 39866852
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||| ||||||||||  || | ||||||||||| ||| ||||||||||||||||| || ||| ||||||||||    
T  39866925 tattgcatcaaaagtaaaaacaattattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaag 39866852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 41351270 - 41351181
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    |||| ||||||||||||||| ||| ||||| ||| ||||||| |||||||| |||  || ||| ||||||||||||| ||| || |||||    
T  41351270 tattatatcaaaagtagtaacattaattgaatgtcttgatttatgtaaaatatcagaaagtgacaattaaaaaggaacggaggtagtatt 41351181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 2858653 - 2858577
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||| ||  |||||||||||| ||| | |||||||||||| || |  ||| |||||||||||||    
T  2858653 tattgtatcaaaagtagcaacctttattgattgtcttggtctgtgtaaaatgttaaaatgtgacaattaaaaaggaa 2858577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 27992410 - 27992486
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || ||||||||||||  |||||||||||||||| |  ||| |||||||||||||    
T  27992410 tattgcatcaaaagtagtatcaattgttgattgtattgggttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 27992486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 40139910 - 40139858
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgt 71  Q
    ||||| |||||||||||||| | ||||||||||| ||| ||||||||||||||    
T  40139910 tattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgt 40139858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 40319004 - 40318952
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgt 71  Q
    ||||||||||||||||| || ||||||||||| | ||| ||||||||||||||    
T  40319004 tattgtatcaaaagtagcaacatttattgattatcttggtttgtgtaaaatgt 40318952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 52663612 - 52663684
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| |||||||||||||  | ||||||||||| ||| ||||||| ||||||||| | |||| |||||||||    
T  52663612 tattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtgaaatgtcaaaatatgacaattaaaaa 52663684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 51219143 - 51219080
Alignment:
Q  45 ttgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    |||||||| ||| |||||||||||||||||||  ||| ||||||||||||| ||| || |||||    
T  51219143 ttgattgtcttggtttgtgtaaaatgtcaatatgtgacaattaaaaaggaacggaggtagtatt 51219080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 45513368 - 45513318
Alignment:
Q  45 ttgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||| |||||||||||||||| |||| | |||| |||||||||||||    
T  45513368 ttgattgttttgatttgtgtaaaatatcaaaatatgacaattaaaaaggaa 45513318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 47069933 - 47069843
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| |||||||||| || ||| || ||||||    
T  47069933 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggatgtagtatta 47069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 3114465 - 3114389
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaat 96  Q
    |||||||| ||||||||||| ||||| ||||||| ||| |||| ||||||| | || || ||| ||||||||||||||    
T  3114465 tattgtattaaaagtagtaacatttactgattgt-ttggtttgagtaaaatattaaaaagtgacaattaaaaaggaat 3114389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 53745358 - 53745269
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| |||||||||||||  | || |||||| | ||| ||||||||||||||||| |  ||| ||||||||||||| ||| || |||||    
T  53745358 tattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagtatt 53745269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 790720 - 790796
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| |||||||||||| |||| |  |||| ||||||||||||    
T  790720 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgatcattaaaaaggaa 790796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 27483864 - 27483788
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || ||||||||  |||||||| |||||||| || | |||| |||||||||||||    
T  27483864 tattgcatcaaaagtagtatcaattgttgattgtcctgatttgtataaaatgttaaaatatgacaattaaaaaggaa 27483788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 29698161 - 29698237
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||| |||||  | || |||||||| || |||||||||||||||||| |  ||| |||||||||||||    
T  29698161 tattgcatcaaaaatagtatcaattgttgattgtcttaatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 29698237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 34266516 - 34266440
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  |||  ||||||||||||    
T  34266516 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacgattaaaaaggaa 34266440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 41926863 - 41926926
Alignment:
Q  31 agtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||| | ||||||||||| ||| |||||||||||||| || || ||| |||||||||||||    
T  41926863 agtagtaacaattattgattgtcttggtttgtgtaaaatgt-aaaaagtgacaattaaaaaggaa 41926926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 42515247 - 42515174
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||| ||||||   ||||||||||| ||| |||||||||||||| || || | | |||||||||||||    
T  42515247 attgtatcaaaaatagtaac--ttattgattgtcttggtttgtgtaaaatgttaaaaagttacaattaaaaaggaa 42515174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 54898162 - 54898086
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| ||| ||||||||||||| |  ||| |||||||||||||    
T  54898162 tattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaa 54898086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 32348146 - 32348223
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||||||||||    
T  32348146 agtattgtatcaaaagtagtaatatttattgattgtattggtttgtgtaaaatgtcaa-aagtgacaattaaaaaggaa 32348223  T

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Target: chr1; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 30702357 - 30702280
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaat 96  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| || ||| ||||||||||||||    
T  30702357 tattgtatcaaaagtggtaacatttattgattgtattggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaat 30702280  T

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Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 10506981 - 10507057
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||  |||||| |||||||||||||    
T  10506981 tattgcatcaaaagtagtaatatttattgattgtcttgatttgtgtaaaatatcacaaaatgacaattaaaaaggaa 10507057  T

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Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 42800277 - 42800354
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatg 97  Q
    |||||||||| |||||||| ||||||||||||| ||| ||||||||||||||||| || ||| |||||||||||||||    
T  42800277 attgtatcaagagtagtaacatttattgattgttttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaatg 42800354  T

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Target: chr1; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 9127839 - 9127915
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| ||||||||| ||| ||| ||||||||||||||||| || ||| |||||||||||||    
T  9127839 tattgtatcaaaagtagtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 9127915  T

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Target: chr1; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 31487846 - 31487770
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  31487846 tattgtatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 31487770  T

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Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 35700442 - 35700366
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||||||||| |||  |||||| |||||||||||||    
T  35700442 tattatatcaaaagtagtaacatttattgattgtcttgatttgtgtaaaatatcacaaaatgacaattaaaaaggaa 35700366  T

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Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 36850807 - 36850883
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||| ||||||||||||||| ||||||||| ||| |||||||||||||||| |||| |||||| |||||||||||||    
T  36850807 tattatatcaaaagtagtaacatttattgactgtcttgatttgtgtaaaatatcaaaaaatgacaattaaaaaggaa 36850883  T

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Target: chr1; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 46096716 - 46096792
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||| |||| || ||| |||||| ||||||    
T  46096716 tattgtatcaaaagtagtaatatttattgattgtattgatgtgtataaaatatcaaaaagtgacaattaagaaggaa 46096792  T

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Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 51974238 - 51974162
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||||||||||||| ||| ||| || |||||||||||||| || ||| |||||||||||||    
T  51974238 tattgtatcaaaagtagtaatatttattgaatgttttggttcgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 51974162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 52649796 - 52649720
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| ||||||||||||| |||||| ||| |||||||||| || ||| |||||||||||||    
T  52649796 tattgtatcaaaagtagtaacatttattgattgtcttgattagtgaaaaatgtcaaaaagtgacaattaaaaaggaa 52649720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 5598216 - 5598291
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||| |||||||||||||||| ||||||||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  5598216 attgcatcaaaagtagtaataattattgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaaaaggaa 5598291  T

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Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 4775398 - 4775472
Alignment:
Q  225 acatttgtgtagccatatatacatggaatacaatgatgaatattgttgaaatcatggaacagtcaactatactat 299  Q
    |||||||||| |||||||||||||  |||||||||||||||  || | |||||||||||||||||||||||||||    
T  4775398 acatttgtgtggccatatatacatataatacaatgatgaattatgctaaaatcatggaacagtcaactatactat 4775472  T

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Target: chr1; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 18344494 - 18344568
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||||||||||||||| |||||||||||| ||| |||||||||||||||||||| || || ||| |||||||||    
T  18344494 agtattgtatcaaaagtggtaatatttattaattatattgatttgtgtaaaatgttaaaaagtgacaattaaaaa 18344568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 35605766 - 35605844
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||| |||||||| || ||||||||||||||||||||| |||||||||||||||||  | ||| |||||||||||||    
T  35605766 agtattatatcaaaattaataatatttattgattgtattggtttgtgtaaaatgtcaaatagtgacaattaaaaaggaa 35605844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 32994536 - 32994463
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||| |||||||||||||||| ||||||||||| ||| ||||||||||||||||| ||| || ||||||||||    
T  32994536 tattgcatcaaaagtagtaataattattgattgtcttggtttgtgtaaaatgtcaaaaaaagacaattaaaaag 32994463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 36318522 - 36318598
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||| | ||||||||| ||||||| |||||||||| |||||| || ||| |||||||||||||    
T  36318522 tattgtatcaaaagtagtgacatttattgaatgtattggtttgtgtaaattgtcaaaaagtgacaattaaaaaggaa 36318598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 12721611 - 12721686
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||||||||||| ||||| ||| ||| |||||||||| || || ||| |||||||||||||    
T  12721611 attgtatcaaaagtagtaatatttatttattgtcttggtttatgtaaaatgttaaaaagtgacaattaaaaaggaa 12721686  T

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Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 32168378 - 32168303
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||  ||||||||||||| ||| |||||||||||| |||| || ||| |||||||||||||    
T  32168378 attgtatcaaaagtagtaccatttattgattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaa 32168303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 48174738 - 48174664
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||| |||||  ||||||||||||| |||||||||||||||| |||| || |||||||||||||||||    
T  48174738 attgtatcaaaa-tagtatcatttattgattgtcttgatttgtgtaaaatatcaaaaagtgataattaaaaaggaa 48174664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 19929533 - 19929457
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||||| || | ||||||||||| ||| |||||||||||||| || |||||| |||||||||||||    
T  19929533 tattgcatcaaaagtagaaacaattattgattgtcttggtttgtgtaaaatgttaaaaaatgacaattaaaaaggaa 19929457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 40926820 - 40926748
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    |||||||||||||||||||| | ||||||||||||||| ||| ||||||||||||| |  ||| |||||||||    
T  40926820 tattgtatcaaaagtagtaacaattattgattgtattggtttatgtaaaatgtcaaaatgtgacaattaaaaa 40926748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 4100975 - 4100900
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||| ||| ||||||||||||| ||  |||||||||||| |||| || | |||||||||||||||    
T  4100975 attgtatcaaaagtaataacatttattgattgtcttagtttgtgtaaaatatcaaaaagtaataattaaaaaggaa 4100900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 37735205 - 37735130
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||  ||||||||||||| ||| |||| ||||||| | || || |||||||||||||||||    
T  37735205 attgtatcaaaagtagtatcatttattgattgtcttggtttgcgtaaaatttgaaaaagtgataattaaaaaggaa 37735130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 51613582 - 51613657
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||  ||||||||||||| ||| |||||||||||| | || || ||| |||||||||||||    
T  51613582 attgtatcaaaagtagtatcatttattgattgtcttggtttgtgtaaaatataaaaaagtgacaattaaaaaggaa 51613657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 1039124 - 1039067
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||||||||||||||||| |||||||||||||||||| || || ||| |||||||||    
T  1039124 agtaatatttattgattgtcttgatttgtgtaaaatgttaaaaagtgacaattaaaaa 1039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 1046030 - 1045973
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||||||||||||||||| |||||||||||||||||| || || ||| |||||||||    
T  1046030 agtaatatttattgattgtcttgatttgtgtaaaatgttaaaaagtgacaattaaaaa 1045973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 20605691 - 20605602
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| | |||| ||||||||| ||||||| || |||||    
T  20605691 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaaaatgaatggaggtagtatt 20605602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 2059879 - 2059799
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    ||||| |||||| ||||||| | ||||||||| | ||| ||||||||||||||||| |  ||| |||||||||||||||||    
T  2059879 tattgcatcaaatgtagtaacaattattgattattttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatgga 2059799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 13507940 - 13508016
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||| |||||||||  | ||||||||||| ||||||| ||||||||||||| |  |||||||||||||||||    
T  13507940 tattgcatccaaagtagtatcaattattgattgtcttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaa 13508016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 13515128 - 13515204
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||| |||||||||  | ||||||||||| ||||||| ||||||||||||| |  |||||||||||||||||    
T  13515128 tattgcatccaaagtagtatcaattattgattgtcttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaa 13515204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 37437120 - 37437044
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||| |||  | ||||||||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  37437120 tattgcatcaaaagtggtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaaaaggaa 37437044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 1677368 - 1677443
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagga 94  Q
    ||||| || ||||||||||  | ||||||||||| ||||||||||||||||||||| |  ||| ||||||||||||    
T  1677368 tattgcattaaaagtagtatcaattattgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaagga 1677443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 17013601 - 17013648
Alignment:
Q  24 tatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgt 71  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  17013601 tatcaaaagtagtaacatttattgaatgtattggtttgtgtaaaatgt 17013648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 19455466 - 19455412
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    |||||||||||||||||||| ||| ||||||||| ||| |||||||||||||||||    
T  19455466 tattgtatcaaaagtagtaacatt-attgattgtcttggtttgtgtaaaatgtcaa 19455412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 43809075 - 43809150
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||| ||||| | ||||||||||| || |||| |||||||||| || || ||| |||||||||||||    
T  43809075 attgtatcaaaagcagtaacacttattgattgtcttaatttatgtaaaatgttaaaaagtgacaattaaaaaggaa 43809150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 31570699 - 31570653
Alignment:
Q  24 tatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatg 70  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  31570699 tatcaaaagtagtaacatttattgaatgtattggtttgtgtaaaatg 31570653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 1427888 - 1427925
Alignment:
Q  58 tttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  1427888 tttgtgtaaaatgtcaaaaaatgataattaaaaaggaa 1427925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 29830923 - 29831012
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| |||||||||| ||  | ||||||||||| ||| ||||||||||||||||| |  ||| ||||||||||||| ||| || |||||    
T  29830923 tattgcatcaaaagtaatatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtatt 29831012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 35531362 - 35531273
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| ||||||||||||| ||| || |||||    
T  35531362 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtatt 35531273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 37296790 - 37296745
Alignment:
Q  24 tatcaaaagtagtaatatttattgattgtattgatttgtgtaaaat 69  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  37296790 tatcaaaagtagtaacatttattgaatgtattggtttgtgtaaaat 37296745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 8464324 - 8464236
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtat 107  Q
    ||||| |||||||||||||  | || |||||||| ||| ||| ||||||||||||| |  ||| ||||||||||||| |||||| ||||    
T  8464324 tattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaagtagtat 8464236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 10676072 - 10676148
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||| ||| | | ||||| | ||||||||| ||||||||||||| |  |||||||||||||||||    
T  10676072 tattgcatcaaaagtaataacaatcattgactatattgatttatgtaaaatgtcaaaatgtgataattaaaaaggaa 10676148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 13566849 - 13566925
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  13566849 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 13566925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 39412578 - 39412502
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||||| || | ||||||||||| ||| ||||| |||||||| || || ||| |||||||||||||    
T  39412578 tattgcatcaaaagtagaaacaattattgattgttttggtttgtataaaatgttaaaaagtgacaattaaaaaggaa 39412502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 43500676 - 43500752
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  43500676 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 43500752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 51972348 - 51972276
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| |||||||||||||| |  |||||||||| || |||||||||||||||||| || | | |||||||||    
T  51972348 tattgcatcaaaagtagtaacaactattgattgtcttaatttgtgtaaaatgtcaaaaagtaacaattaaaaa 51972276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 30686581 - 30686671
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||| |||||||||||||  | || |||||||| ||| |||||||||||| |||| |  ||| ||||||||||||| ||| || ||||||    
T  30686581 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaacgtgacaattaaaaaggaacggaggtagtatta 30686671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 42787194 - 42787144
Alignment:
Q  45 ttgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||| |||||||  |||||||||||| |||||| |||||||||||||    
T  42787194 ttgattgtcttgatttaggtaaaatgtcaaaaaatgacaattaaaaaggaa 42787144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 1038271 - 1038332
Alignment:
Q  33 tagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagga 94  Q
    |||||||||||||||||||| || ||| ||||||||| || | |||| | ||||||||||||    
T  1038271 tagtaatatttattgattgtctttattcgtgtaaaatatctaaaaataacaattaaaaagga 1038332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 1045177 - 1045238
Alignment:
Q  33 tagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagga 94  Q
    |||||||||||||||||||| || ||| ||||||||| || | |||| | ||||||||||||    
T  1045177 tagtaatatttattgattgtctttattcgtgtaaaatatctaaaaataacaattaaaaagga 1045238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 9362158 - 9362219
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||| ||| ||||||||| ||||||||||| || ||| | |||||||||||    
T  9362158 agtaaaatttattgagtgtcttgatttgtataaaatgtcaaaaagtgacagttaaaaaggaa 9362219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 35255656 - 35255729
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||| ||||||||||  || | ||||||||||| ||| ||| ||||||||||||| || ||| ||||||||||    
T  35255656 tattgcatcaaaagtaaaaacaattattgattgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaag 35255729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 38648627 - 38648700
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||| ||||||| |||||  | || |||||||| ||||||||||||||||||||| |  ||| ||||||||||    
T  38648627 tattgcatcaaaaatagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaag 38648700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 48508303 - 48508376
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||||||||||||||  || ||||||||||| | ||| ||||| ||||||||||| |  ||| ||||||||||    
T  48508303 tattgtatcaaaagtaacaacatttattgattattttggtttgtataaaatgtcaaaatgtgacaattaaaaag 48508376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 1024726 - 1024802
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| |||||||||||| |||| |  ||| |||||||||||||    
T  1024726 tattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaa 1024802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 12231138 - 12231062
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| ||| ||||||||||||| |  ||| |||||||||||||    
T  12231138 tattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaa 12231062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 19349446 - 19349370
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||  |  ||| |||||||||||||    
T  19349446 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcagaatgtgacaattaaaaaggaa 19349370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 23855726 - 23855803
Alignment:
Q  18 gtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||  ||||||||||||    
T  23855726 gtattgtatcaaaagtagtaatatttattgattgtattggtttatgtaaaatgtcaaaaaatgacgattaaaaaggaa 23855803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 14061219 - 14061130
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||||| || || ||| ||||||||||||| ||| || |||||    
T  14061219 tattgtatcaaaagtagtaatatttattgattgtcttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggaggtagtatt 14061130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 29091148 - 29091074
Alignment:
Q  26 tcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||||||| ||| ||||    
T  29091148 tcaaaagtagtaatatttattgattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacggaa 29091074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 35029714 - 35029792
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||| |||||||| || |||||| |||||||||||||    
T  35029714 agtattgtatcaaaagtagtgatatttatggattatattgatttgtataaaatgttaaaaaatgacaattaaaaaggaa 35029792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 27911741 - 27911668
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagg 93  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| | | |||||||||    
T  27911741 attgtatcaaaagtagtaacatttattgattgtcttgatttgtgtaaaatgtcaaaaaataacacttaaaaagg 27911668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 27958160 - 27958087
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagg 93  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| | | |||||||||    
T  27958160 attgtatcaaaagtagtaacatttattgattgtcttgatttgtgtaaaatgtcaaaaaataacacttaaaaagg 27958087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 18842699 - 18842775
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |  ||| |||||||||||||    
T  18842699 tattgtatcaaaagtagtaacatttattgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 18842775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 167550 - 167471
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaa-tgataattaaaaaggaa 95  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| || ||| ||| |||||||||||||    
T  167550 agtattgtatcaaaagtagtaatatttattgattatattggtttgtgtgaaatgttaaaaaagtgacaattaaaaaggaa 167471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 26740206 - 26740131
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||| || ||| |||||||||||||    
T  26740206 attgtatcaaaagtagtaacacttattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 26740131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 1245482 - 1245558
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | ||||||||||| ||||||| ||||||||||||| || ||| |||||||||||||    
T  1245482 tattgaatcaaaagtagtaacaattattgattgtcttgatttatgtaaaatgtcaaaaagtgacaattaaaaaggaa 1245558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 8554086 - 8554010
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| |  ||| |||| ||||||||    
T  8554086 tattgtatcaaaagtagcaacatttattgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattgaaaaggaa 8554010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 12248840 - 12248764
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||||||||||||| ||| ||| || |||||||||||||| || ||  |||||||||||||    
T  12248840 tattgtatcaaaagtagtaatatttattgaatgtcttggttcgtgtaaaatgtcaaaaactgtcaattaaaaaggaa 12248764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 31964739 - 31964815
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||| |||||| ||||||||||||| ||| ||||||||||||||||  |||||| ||||||| |||||    
T  31964739 tattgtatcaaaaatagtaacatttattgattgtcttggtttgtgtaaaatgtcataaaatgacaattaaagaggaa 31964815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 8672665 - 8672747
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagt 102  Q
    |||||||||||| || ||| ||||||||||| | ||| |||||||||||| |||| |||||| ||||||||||||| ||||||    
T  8672665 attgtatcaaaaataataacatttattgattattttggtttgtgtaaaatatcaaaaaatgacaattaaaaaggaacggaagt 8672747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 2888538 - 2888449
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||||||||||||||| || ||||||||||||| ||| |||||||||||||| || |  ||| ||||||||||||| ||| || |||||    
T  2888538 tattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagtatt 2888449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 17074652 - 17074576
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||||| |||||||||||||||| ||| |||||||||||||| || |  ||| |||||||||||||    
T  17074652 tattgcatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaa 17074576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 17573618 - 17573694
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||||| |||||||||||||||| ||| |||||||||||||| || |  ||| |||||||||||||    
T  17573618 tattgcatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaa 17573694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 41643560 - 41643488
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    |||| ||||||||||||||| ||||||||| | ||||| ||||||||||||||||| |||| | |||||||||    
T  41643560 tattatatcaaaagtagtaacatttattgactttattggtttgtgtaaaatgtcaaaaaattacaattaaaaa 41643488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 43642059 - 43641983
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | ||||||||||| ||  ||||||||||||||||| || ||| |||||||||||||    
T  43642059 tattgcatcaaaagtagtaacaattattgattgtcttagtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 43641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 43553209 - 43553263
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtca 73  Q
    |||||||||||||||||||| ||||||||||||| ||| |||| |||||||||||    
T  43553209 tattgtatcaaaagtagtaacatttattgattgtcttggtttgcgtaaaatgtca 43553263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 26062877 - 26062957
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    ||||| |||||||||||||  | || |||||| | ||||||||||||||||||||| |  ||| |||||||||||||||||    
T  26062877 tattgcatcaaaagtagtatcaattgttgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatgga 26062957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 33935130 - 33935054
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | ||||||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  33935130 tattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 33935054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 1739884 - 1739939
Alignment:
Q  40 atttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||| ||||||| ||||||||||||| || ||| |||||||||||||    
T  1739884 atttattgattgtgttgatttatgtaaaatgtcaaaaagtgacaattaaaaaggaa 1739939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 92
Target Start/End: Complemental strand, 11707518 - 11707451
Alignment:
Q  25 atcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||||||||| ||||||||||| || |||| |||||||||| || | |||| ||||||||||    
T  11707518 atcaaaagtagtaataattattgattgtcttaatttatgtaaaatgtaaaaatatgacaattaaaaag 11707451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 14511499 - 14511428
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    |||||||||||| |||||| ||||||| ||||| ||| |||||||||||| |||| || ||| |||||||||    
T  14511499 attgtatcaaaaatagtaacatttattaattgtcttggtttgtgtaaaatttcaaaaagtgacaattaaaaa 14511428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 23793344 - 23793265
Alignment:
Q  20 attgtatcaaaagtagtaa----tatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||| ||||||    |||||||| ||||| ||| |||||||||||||| || |||||| |||||||||||||    
T  23793344 attgtatcaaaaatagtaacatttatttattaattgtcttggtttgtgtaaaatgttaaaaaatgacaattaaaaaggaa 23793265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 7605969 - 7605894
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| || ||||||| ||||  ||||||||||| |||||||||||||||||| || |||| | |||||||||||||    
T  7605969 tattgcattaaaagtaataatgattattgattgtcttgatttgtgtaaaatgttaa-aaataacaattaaaaaggaa 7605894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 8453306 - 8453230
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | ||||||||| | ||  ||||||||||||||||| |  ||| |||||||||||||    
T  8453306 tattgcatcaaaagtagtaacaattattgattatcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 8453230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 11994051 - 11994127
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || || ||||| ||||||||||||||||||||| |  ||| |||||||||||||    
T  11994051 tattgcatcaaaagtagtatcaattgtttattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 11994127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 23430079 - 23430159
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    ||||| |||||||||||||  | || |||||||| |||||||||||||||||| || |  |||  ||||||||||||||||    
T  23430079 tattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgttaaaatgtgacgattaaaaaggaatgga 23430159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 23848626 - 23848550
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | ||||||||||| ||| ||||||| ||||||||| |  ||| |||||||||||||    
T  23848626 tattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtcaaatgtcaaaatgtgacaattaaaaaggaa 23848550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 34981999 - 34982075
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||||||| || || |||||||| ||| |||||||||||| |||| |  ||| |||||||||||||    
T  34981999 tattgcatcaaaagtagtattaattgttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaa 34982075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 35052305 - 35052345
Alignment:
Q  32 gtagtaatatttattgattgtattgatttgtgtaaaatgtc 72  Q
    ||||||| ||||||||| |||||||||||||||||||||||    
T  35052305 gtagtaacatttattgaatgtattgatttgtgtaaaatgtc 35052345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 3720851 - 3720926
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||| ||| | | ||||||||||| ||  |||||||||||||| || || ||| |||||||||||||    
T  3720851 attgtatcaaaagcagtcaaacttattgattgttttagtttgtgtaaaatgttaaaaagtgacaattaaaaaggaa 3720926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 6757591 - 6757666
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||| ||||||||| ||| ||||||||||||||||||||| || ||| | | ||||||||| ||| || ||||||    
T  6757591 agtaacatttattgagtgtcttgatttgtgtaaaatgtcaaaaagtgacagtaaaaaaggaacggaggtagtatta 6757666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 32010154 - 32010071
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagt 102  Q
    ||||| |||||||||||||  | ||||||||||| ||| |||||| ||||||| || || ||| ||||||||| ||| ||||||    
T  32010154 tattgcatcaaaagtagtagcaattattgattgtcttggtttgtgaaaaatgttaaaaagtgacaattaaaaatgaacggaagt 32010071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 39303586 - 39303531
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    ||||| |||||||||||||  | || |||||||| |||||||||||||||||||||    
T  39303586 tattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaa 39303531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 6661123 - 6661201
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatg 97  Q
    |||||||||||||||||| | || |||| | ||| ||| ||||||||||| ||||| |  ||| |||||||||||||||    
T  6661123 tattgtatcaaaagtagtgaaatatatttagtgtgttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaatg 6661201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 6741525 - 6741603
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatg 97  Q
    |||||||||||||||||| | || |||| | ||| ||| ||||||||||| ||||| |  ||| |||||||||||||||    
T  6741525 tattgtatcaaaagtagtgaaatatatttagtgtgttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaatg 6741603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 10180540 - 10180613
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||| |||||||||||||| | | ||||| | | ||||||| ||||||||||||| | |||| ||||||||||    
T  10180540 tattgcatcaaaagtagtaacaatcattgactatcttgatttatgtaaaatgtcaaaatatgacaattaaaaag 10180613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 13174114 - 13174175
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||| ||| ||| ||||||||||||||||| || ||| | |||||||||||    
T  13174114 agtaacatttattgagtgtcttggtttgtgtaaaatgtcaaaaagtgacagttaaaaaggaa 13174175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 15596514 - 15596603
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| || ||||||| ||| | ||||||||| | ||| ||||||||||||||||| |  ||| ||||||||||||| ||| || |||||    
T  15596514 tattgcataaaaagtaataacaattattgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtatt 15596603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 18291633 - 18291722
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| |||||||||||||| | | ||||| | | ||||||| ||||||||||||| |  ||| ||||||||||||| ||| || |||||    
T  18291633 tattgcatcaaaagtagtaacaatcattgactatcttgatttttgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtatt 18291722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 39663948 - 39664021
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||| ||||||||||| ||||||||||| |||||  |||||||||||||  ||||| || | | ||||||||||    
T  39663948 tattctatcaaaagtaataatatttatttattgtcatgatttgtgtaaagagtcaaaaagtaacaattaaaaag 39664021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 41701537 - 41701476
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||| ||| |||||||||||||||| | || || ||| | |||||||||||    
T  41701537 agtaatatttattgagtgtcttgatttgtgtaaaatattaaaaagtgacagttaaaaaggaa 41701476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 12342684 - 12342608
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | | ||||| | | ||| ||| ||||||||||||| | |||| |||||||||||||    
T  12342684 tattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatatgacaattaaaaaggaa 12342608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 13328140 - 13328216
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||| ||||||||||  | || |||||||| ||  ||||||||||||||||| |  ||| |||||||||||||    
T  13328140 tattgtattaaaagtagtatcaatttttgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 13328216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 35052223 - 35052299
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||| |||||  | || |||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  35052223 tattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 35052299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 38482862 - 38482786
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| |||||||||||| |||| |  ||| |||||||||||||    
T  38482862 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaa 38482786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 40228465 - 40228553
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtat 107  Q
    ||||| ||||||| |||||  | || |||||||| ||| ||||||||||| ||||| |  ||| ||||||||||||||| |||| ||||    
T  40228465 tattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaacgtcaaaatgtgacaattaaaaaggaatgaaagtagtat 40228553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 7595 - 7670
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||| |||||||||||||    
T  7595 attgtatcaaaagtagtaatatttattgattgtcttgatttgtgtaaaatatcaaaaagtgacaattaaaaaggaa 7670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 4e-23; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 12723025 - 12722950
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| || ||| |||||||||||||    
T  12723025 attgtatcaaaagtagtaatatttattgattgtcttggtttgtgtaaaatgtcaaaaagtgagaattaaaaaggaa 12722950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 5843059 - 5842984
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||||| || |||||||||||||||||    
T  5843059 attgtatcaaaagtagtaacatttattgattgtcttggtttatgtaaaatgtcaaaaagtgataattaaaaaggaa 5842984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 12784509 - 12784434
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| || ||| |||||||||||||    
T  12784509 attgtatcaaaagtagtaacatttattgattgtcttggtttgtgtaaaatgtcaaaaagtgagaattaaaaaggaa 12784434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 13703250 - 13703325
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||| |||| || ||| |||||||||||||    
T  13703250 attgtatcaaaaatagtaatatttattgattgtcttgatttgtgtaaaatatcaaaaagtgacaattaaaaaggaa 13703325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 12638013 - 12637940
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagg 93  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||| || || ||| |||||||||||    
T  12638013 attgtatcaaaagtagtaatatttattgattgtcttgatttatgtaaaatgttaaaaagtgacaattaaaaagg 12637940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 7408483 - 7408559
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||| |||| |||||||||||| ||| ||||||||||||||||| | |||| |||||||||||||    
T  7408483 tattgtatcaaaagtattaatgtttattgattgttttggtttgtgtaaaatgtcaaaagatgacaattaaaaaggaa 7408559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 9958950 - 9958878
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    |||||||||||||||||| | ||||||||| |||||||||||||||||| |||||| |||||| |||||||||    
T  9958950 tattgtatcaaaagtagtgacatttattgaatgtattgatttgtgtaaattgtcaaaaaatgacaattaaaaa 9958878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 18437392 - 18437300
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||||||||||||| | |||| ||||||||||||||||| |||||||||||| |||| || ||| ||||||||||||| ||| || ||||||    
T  18437392 agtattgtatcaaaaatggtaacatttattgattgtattggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggaggtagtatta 18437300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 31803477 - 31803565
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| || ||| ||||||||| ||| ||| || |||||    
T  31803477 attgtatcaaaagtagtaacatttattaattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacggaggtagtatt 31803565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 6008037 - 6008113
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaa-tgataattaaaaaggaa 95  Q
    ||||||||||||||||||| | ||||||||||||||| |||||||||||| |||| ||| ||| |||||||||||||    
T  6008037 attgtatcaaaagtagtaacaattattgattgtattggtttgtgtaaaatatcaaaaaagtgacaattaaaaaggaa 6008113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 26906642 - 26906718
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| ||||||||| ||| ||| |||||||||||| |||| || ||| |||||||||||||    
T  26906642 tattgtatcaaaagtagtaagatttattgaatgttttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaa 26906718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 28024326 - 28024250
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||||| ||||||||||| ||| || |||||||||||||| | |||| |||||||||||||    
T  28024326 tattgcatcaaaagtagtaataattattgattgtcttggttggtgtaaaatgtcaaaatatgacaattaaaaaggaa 28024250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 37633829 - 37633903
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagga 94  Q
    ||||||||||||||||||| ||||||| ||||| ||| |||||||||||| |||| || ||| ||||||||||||    
T  37633829 attgtatcaaaagtagtaacatttattaattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaagga 37633903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 4017566 - 4017655
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| ||||||||||  || | ||||||||| | ||||||||||||||||||||| || ||| ||||||||||||||||| || |||||    
T  4017566 tattgcatcaaaagtaaaaacaattattgattatcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaatggatgtagtatt 4017655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 6330973 - 6331050
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaat 96  Q
    |||| ||||||||||||||||||||||||||||| |   ||| ||||||||||||| ||  |||||||||||||||||    
T  6330973 tattttatcaaaagtagtaatatttattgattgtctaagtttatgtaaaatgtcaaaaagagataattaaaaaggaat 6331050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 3243948 - 3244020
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    |||||||| |||| |||||| ||||||| ||||| ||||||| ||||||||||||| |||||| |||||||||    
T  3243948 tattgtataaaaaatagtaacatttattaattgtcttgatttatgtaaaatgtcaaaaaatgacaattaaaaa 3244020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 6689751 - 6689827
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||| |||||| | ||||| ||||| |||||||||||||||||| || |||| | |||||||||||||    
T  6689751 tattgtatcaaaaatagtaacaattattaattgttttgatttgtgtaaaatgtaaaaaaataacaattaaaaaggaa 6689827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 8825209 - 8825285
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||||||||||||||||||||| |  |||||||||||||||||    
T  8825209 tattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgataattaaaaaggaa 8825285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 14793857 - 14793781
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||| |||||||| ||||||||| ||||| ||||||||||||||||| |  ||| |||||||||||||    
T  14793857 tattgcatcaaaaatagtaataattattgattatattggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 14793781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 37306765 - 37306693
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||||||||||||||||| ||||||| ||||| ||| |||||||||||||| || || ||| ||||||||||    
T  37306765 attgtatcaaaagtagtaacatttattaattgtcttggtttgtgtaaaatgttaaaaagtgacaattaaaaag 37306693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 39893875 - 39893800
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||| | ||||||||| | ||| |||||||||||||| || || ||| |||||||||||||    
T  39893875 attgtatcaaaagtagtaacacttattgattattttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaa 39893800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 23418698 - 23418752
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtca 73  Q
    |||||||||||| ||| ||| ||||||||||||| ||||||||||||||||||||    
T  23418698 tattgtatcaaaggtaataacatttattgattgtcttgatttgtgtaaaatgtca 23418752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 37809912 - 37809986
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagga 94  Q
    |||| |||||||||||||| ||||||| ||||| ||| |||||||||||| |||| || ||| ||||||||||||    
T  37809912 attgcatcaaaagtagtaacatttattaattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaagga 37809986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 13461177 - 13461238
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||| ||||||| ||||||||||||||||| || ||| |||||||||||||    
T  13461177 agtaacatttattgagtgtattggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 13461238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 24229102 - 24229183
Alignment:
Q  21 ttgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagt 102  Q
    |||||||||||||||||| ||||||||| ||| ||| |||||||||||| |||  ||| || ||||||||| ||| ||||||    
T  24229102 ttgtatcaaaagtagtaacatttattgaatgtcttggtttgtgtaaaatatcagaaaaagacaattaaaaatgaacggaagt 24229183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 25027642 - 25027569
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||||||||||||| ||||||||||||| ||  ||| ||||||||||||  || ||| ||||||||||    
T  25027642 tattgtatcaaaagtagtaacatttattgattgtcttagtttatgtaaaatgtcacaaagtgacaattaaaaag 25027569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 28447052 - 28446979
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||||||||||| |||||| | ||||||||| | ||| ||||||||||||||||| || ||| ||||||||||    
T  28447052 tattgtatcaaaaatagtaacaattattgattatcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaag 28446979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 3892965 - 3893036
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||||| || ||||||| ||||||||  ||||||||||||||||||||| |||| | ||||||||||    
T  3892965 attgtatcaaaaataataatatt-attgattgacttgatttgtgtaaaatgtcaaaaaataacaattaaaaag 3893036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 5119330 - 5119406
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||||| || | |||||||||||||| |||||| |||||| | || |||||| |||||||||||||    
T  5119330 tattgcatcaaaagtagaaacaattattgattgtattaatttgtataaaatattaaaaaatgacaattaaaaaggaa 5119406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 24074905 - 24074833
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||| |  ||| |||||||||    
T  24074905 tattgcatcaaaagtagtaacaattattgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaaaa 24074833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 34261464 - 34261540
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||  | || |||||||| ||| ||||| ||||||||||| | |||| |||||||||||||    
T  34261464 tattgtatcaaaagtagtatcaattgttgattgtcttggtttgtctaaaatgtcaaaatatgacaattaaaaaggaa 34261540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 38297592 - 38297516
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||||| || | ||||||||||| ||| |||||||||||||| || || ||| |||||||||||||    
T  38297592 tattgcatcaaaagtagaaacaattattgattgtcttgttttgtgtaaaatgttaaaaagtgacaattaaaaaggaa 38297516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 42911702 - 42911778
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | ||||||||||| ||| |||||||||||| |||| |  ||| |||||||||||||    
T  42911702 tattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaa 42911778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 31546066 - 31546011
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    ||||| |||||||||||||| | ||||||||||| ||| |||||||||||||||||    
T  31546066 tattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaa 31546011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 2133973 - 2133901
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagg 93  Q
    ||||| ||||||| |||||| | ||||||||||| ||| ||| ||||||||||||| ||||||||||||||||||    
T  2133973 tattgcatcaaaa-tagtaacaattattgattgtcttggtttatgtaaaatgtcaa-aaatgataattaaaaagg 2133901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 7466335 - 7466409
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagga 94  Q
    ||||||| ||||||| ||| ||||||| ||||| ||||||| |||||||| |||| |||| | ||||||||||||    
T  7466335 attgtattaaaagtaataacatttattaattgtcttgatttatgtaaaatatcaaaaaataacaattaaaaagga 7466409  T

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Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 425291 - 425351
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||| ||| ||||||||||||||||||||| |||||| | |||||||||||    
T  425291 agtaacatttattgagtgtcttgatttgtgtaaaatgtcaa-aaatgacagttaaaaaggaa 425351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 3686842 - 3686931
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||||||||||||||| || ||||||||||||| ||| ||| | ||||| ||||| |  |||||||||||||  |||||| || |||||    
T  3686842 tattgtatcaaaagtagcaacatttattgattgttttggtttatataaaacgtcaaaatgtgataattaaaaataaatggaggtagtatt 3686931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 4427473 - 4427396
Alignment:
Q  19 tattgtatcaaaagtagtaatat-ttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||| ||||  ||| ||||||| |||||| ||||||||| |||| || ||| |||||||||||||    
T  4427473 tattgtatcaaaagtagcaataaattactgattgtcttgattcgtgtaaaatatcaaaaagtgacaattaaaaaggaa 4427396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 31985117 - 31985044
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||| ||| ||||||| | | ||||||||||||| ||||||| ||||||||||||| || ||||||||| ||||    
T  31985117 tattatattaaaagtaatgacatttattgattgtcttgatttatgtaaaatgtcaaaaagtgataattagaaag 31985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 32389139 - 32389208
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaa 89  Q
    ||||||||||||||||||| | ||||||||||| ||| ||| |||||||||| || || ||| |||||||    
T  32389139 attgtatcaaaagtagtaacacttattgattgtcttggtttatgtaaaatgttaaaaagtgacaattaaa 32389208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 4175547 - 4175471
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||  | || || ||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  4175547 tattgtatcaaaagtagtatcaattgtttattgtcttgctttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 4175471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 4985242 - 4985166
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| |  |||||||||| ||| | ||||||||||||||| |  ||| |||||||||||||    
T  4985242 tattgcatcaaaagtagtaacaactattgattgtcttggtatgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 4985166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 6754223 - 6754163
Alignment:
Q  42 ttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagt 102  Q
    ||||||||||| ||| ||||||||||||||||| |  ||| ||||||||||||| ||||||    
T  6754223 ttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaagt 6754163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 7734830 - 7734762
Alignment:
Q  40 atttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||||||||||| ||||||| |||||||| | || |||||| ||||||||||||| ||| || |||||    
T  7734830 atttattgattgtcttgatttatgtaaaatttgaaaaaatgacaattaaaaaggaacggatgtagtatt 7734762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 8229870 - 8229795
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||| ||| | ||||||||||| || |||||||||| ||||||| || ||| |||||||||||||    
T  8229870 tattgcatcaaaagtattaacaattattgattgtcttaatttgtgtaagatgtcaa-aagtgacaattaaaaaggaa 8229795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 9076223 - 9076299
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| |||||||||||||||||   |||| |||||||||||||    
T  9076223 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaattatgacaattaaaaaggaa 9076299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 12665010 - 12665086
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| ||| ||||||||||||| | |||| |||||||||||||    
T  12665010 tattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatatgacaattaaaaaggaa 12665086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 26854162 - 26854086
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | ||||||||| | ||| ||||||||||||||||| |  ||| |||||||||||||    
T  26854162 tattgcatcaaaagtagtatcaattattgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 26854086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 36239610 - 36239682
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| |||||||||||||| |  |||||||||| ||||| ||||||||||||||| |  ||| |||||||||    
T  36239610 tattgcatcaaaagtagtaacaactattgattgtcttgatatgtgtaaaatgtcaaaatgtgacaattaaaaa 36239682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 36481227 - 36481303
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||| | ||  ||| | ||| ||| ||||||||||| ||||| | ||||||||||||||||||    
T  36481227 tattgtatcaaaagtagtgaaatacatttaatgttttggtttgtgtaaaaagtcaaaatatgataattaaaaaggaa 36481303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 10359302 - 10359219
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagt 102  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| |||||||||| || ||||||    
T  10359302 tattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaagt 10359219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 18465855 - 18465929
Alignment:
Q  25 atcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    |||||||||||||  | || |||||||| ||| ||| || ||||| |||| | ||||||||||||||||||||||    
T  18465855 atcaaaagtagtatcaattgttgattgttttggtttctgaaaaatatcaaaatatgataattaaaaaggaatgga 18465929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 22582624 - 22582713
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||| |||||||||||||  | || |||||||| ||||||||| ||||||||||| |  |||| |||||||||||| ||| || ||||||    
T  22582624 tattgcatcaaaagtagtataaattgttgattgtcttgatttgtataaaatgtcaaaatgtgat-attaaaaaggaacggaggtagtatta 22582713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 4098483 - 4098556
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||||||||| ||  | || |||||||| ||| ||||||||||||||||| |  ||| ||||||||||    
T  4098483 tattgtatcaaaagtaatatcaatttttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaag 4098556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 7834132 - 7834059
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||| ||||||||||  |||| ||||||||| | |||||||||||||||| |||| |  ||| ||||||||||    
T  7834132 tattgcatcaaaagtaaaaataattattgattattttgatttgtgtaaaatatcaaaaggtgacaattaaaaag 7834059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 16124327 - 16124238
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| |||||||||||||| | | ||||| | ||||| ||| ||||||||||||| |  ||| ||||||||||||| ||| || |||||    
T  16124327 tattgcatcaaaagtagtaacaatcattgactatattggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtatt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 19831609 - 19831560
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaa 68  Q
    ||||||||||||| || ||| ||||||||||||| ||| |||||||||||    
T  19831609 tattgtatcaaaaatattaacatttattgattgtcttggtttgtgtaaaa 19831560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 1795169 - 1795129
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    ||||| ||||||||| ||| |||||||||||||||||||||    
T  1795169 agtaacatttattgagtgtcttgatttgtgtaaaatgtcaa 1795129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 2674045 - 2673969
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||| ||  | || |||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  2674045 tattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 2673969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 4440241 - 4440317
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| ||  ||| | ||| ||| ||||||||||| || || | |||| |||||||||||||    
T  4440241 tattgtatcaaaagtagtaaaatacatttagtgtcttggtttgtgtaaaaagttaaaatatgacaattaaaaaggaa 4440317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 6072604 - 6072680
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| || |||||||||||||||  | |  |||||||||||||||||    
T  6072604 tattgcatcaaaagtagtatcaattgttgattgtcttaatttgtgtaaaatgtttaaatgtgataattaaaaaggaa 6072680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 18794961 - 18795025
Alignment:
Q  45 ttgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    |||||||| |||||||||||||||||||||    ||| ||||||||||||| ||| || ||||||    
T  18794961 ttgattgtcttgatttgtgtaaaatgtcaaagtgtgaaaattaaaaaggaacggaggtagtatta 18795025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 25344112 - 25344188
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||||| |  | || |||||||| ||||||||||||||||| ||| |  ||| |||||||||||||    
T  25344112 tattgcatcaaaagtaggatcaattgttgattgtcttgatttgtgtaaaatgacaaaatgtgacaattaaaaaggaa 25344188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 30368202 - 30368150
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgt 71  Q
    |||| |||||||| |||||| ||||||||||||| ||  ||||||||||||||    
T  30368202 tattatatcaaaaatagtaacatttattgattgtcttagtttgtgtaaaatgt 30368150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 38308193 - 38308117
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||| ||||  ||||| ||||||||| ||| ||| ||||||||||||||||| || |||   |||||||||||    
T  38308193 tattgtataaaaaaaagtaacatttattgagtgtcttggtttgtgtaaaatgtcaaaaagtgaccgttaaaaaggaa 38308117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 38910425 - 38910501
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||| | ||| ||||||||||||||||| |  ||| |||||||||||||    
T  38910425 tattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 38910501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 39073196 - 39073272
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| |||||||||||| |||| |  ||| |||||||||||||    
T  39073196 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaa 39073272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 40198940 - 40199012
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| |||||||||||||| | || |||||||| ||||| |||||||||| |||| || | | |||||||||    
T  40198940 tattgcatcaaaagtagtaacaattgttgattgtcttgatctgtgtaaaatatcaaaaagtaacaattaaaaa 40199012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 6e-22; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 47596684 - 47596603
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaa 100  Q
    |||||||||||||||||||| ||||||||| | ||||| ||||||||||||||||| |||||| ||||||||||||| ||||    
T  47596684 tattgtatcaaaagtagtaacatttattgactttattggtttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggaa 47596603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 54231712 - 54231788
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | ||||||||||| ||||||||||||||||||||| |||||| |||||||||||||    
T  54231712 tattgcatcaaaagtagtaacaattattgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaa 54231788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 52057524 - 52057467
Alignment:
Q  17 agtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  52057524 agtattgtatcaaaagtagtaatatttattgattggattggtttgtgtaaaatgtcaa 52057467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 45725709 - 45725785
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| ||||||||| | ||||  ||||||||||||||||| |||||| |||||||||||||    
T  45725709 tattgtatcaaaagtagtaacatttattgactttatttgtttgtgtaaaatgtcaaaaaatgacaattaaaaaggaa 45725785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 33809261 - 33809336
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||||| || || ||| |||||||||||||    
T  33809261 attgcatcaaaagtagtaacatttattgattgttttgatttgtgtaaaatgttaaaaagtgacaattaaaaaggaa 33809336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 53467623 - 53467546
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtc-aataaatgataattaaaaaggaa 95  Q
    |||| |||||||||||||||||||||||||||   ||||||||||||||||||| || |||||| |||||||||||||    
T  53467623 tattatatcaaaagtagtaatatttattgattcatttgatttgtgtaaaatgtcaaaaaaatgacaattaaaaaggaa 53467546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 20087349 - 20087420
Alignment:
Q  24 tatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaat 96  Q
    ||||||||||||||| |||||||||| || ||||||||  ||||||||||| |||||||||||||||||||||    
T  20087349 tatcaaaagtagtaacatttattgatagttttgatttgcctaaaatgtcaa-aaatgataattaaaaaggaat 20087420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 23719855 - 23719779
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||||||||||||| ||| ||  ||| ||||||||||||| |||| | |||||||||||||    
T  23719855 tattgtatcaaaagtagtaatatttattgaatgtcttagtttatgtaaaatgtcaaaaaataacaattaaaaaggaa 23719779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 31984223 - 31984143
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    ||||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||| || ||| |||||||||| ||||||    
T  31984223 tattgcatcaaaagtagtaacaattattgattgtgttggtttgtgtaaaatgtcaaaaagtgacaattaaaaagaaatgga 31984143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 42629493 - 42629581
Alignment:
Q  22 tgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtattac 110  Q
    |||| |||||||||||| ||||||||||||| ||| |||||||||||| |||| |||||| ||||||||| ||| ||| || |||||||    
T  42629493 tgtaccaaaagtagtaacatttattgattgtcttggtttgtgtaaaatatcaaaaaatgacaattaaaaacgaacggatgtagtattac 42629581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 52061731 - 52061807
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | | ||||||||| ||||||||||||||||||||| | |||| |||||||||||||    
T  52061731 tattgcatcaaaagtagtaacaatgattgattgtcttgatttgtgtaaaatgtcaaaatatgacaattaaaaaggaa 52061807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 18135122 - 18135048
Alignment:
Q  19 tattgtatcaaaag-tagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||| | |||| ||||||||||    
T  18135122 tattgtatcaaaaaatagtaatatttattgattgttttggtttgtgtaaaatgtcaaaatatgacaattaaaaag 18135048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 49122332 - 49122258
Alignment:
Q  19 tattgtatcaaaag-tagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||||||  |||||||||||||||||||| ||| ||||||||||||||||| | |||| ||||||||||    
T  49122332 tattgtatcaaaaaatagtaatatttattgattgttttggtttgtgtaaaatgtcaaaatatgacaattaaaaag 49122258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 9220111 - 9220022
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||||||||||||||||| ||||||| ||||| ||| |||||||||||| |||| || ||| |||||||||| || ||| || ||||||    
T  9220111 attgtatcaaaagtagtaagatttattaattgtcttgttttgtgtaaaatttcaaaaagtgacaattaaaaagaaacggaggtagtatta 9220022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 38542347 - 38542271
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | ||||| ||||| ||| ||| ||||||||||||| |||||| |||||||||||||    
T  38542347 tattgcatcaaaagtagtaacaattattaattgtcttggtttatgtaaaatgtcaaaaaatgacaattaaaaaggaa 38542271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 3036557 - 3036632
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||| ||| |||||||||||||  |||||| |||||||||| || | |||| |||||||||||||    
T  3036557 attgtatcaaaagtaataacatttattgattgttatgatttatgtaaaatgtaaaaatatgacaattaaaaaggaa 3036632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 36659475 - 36659408
Alignment:
Q  42 ttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||| |||||| ||| || ||||||    
T  36659475 ttattgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaagaaggaacggaggtagtatta 36659408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 37502195 - 37502250
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||||    
T  37502195 tattgtatcaaaagtagtaacatttattgattgtcttggtttgtataaaatgtcaa 37502250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 49089080 - 49089155
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||| ||||||||||||||||||||| ||| || | ||||||| |||| || ||| |||||||||||||    
T  49089080 attgtatcaaacgtagtaatatttattgattgtcttggttcgagtaaaatatcaaaaagtgacaattaaaaaggaa 49089155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 26933843 - 26933789
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtca 73  Q
    |||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  26933843 tattgtgtcaaaagtagtaacatttattgattgttttggtttgtgtaaaatgtca 26933789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 44176660 - 44176587
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||||||||||||||||||||| | ||| ||| ||| |||||||||| || || ||| ||||||||||    
T  44176660 tattgtatcaaaagtagtaatatttattaaatgttttggtttatgtaaaatgttaaaaagtgacaattaaaaag 44176587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 3436138 - 3436066
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| ||||||||||||| || || |||||||| ||| ||||||||||||||||| |  |||||||||||||    
T  3436138 tattgcatcaaaagtagtattaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaaaa 3436066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 44549816 - 44549887
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaa 90  Q
    |||||||||||||||||||||| |||||||| || ||||||| | |||||| ||||  | ||||||||||||    
T  44549816 tattgtatcaaaagtagtaataattattgatcgttttgatttatataaaatatcaaacagtgataattaaaa 44549887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 92
Target Start/End: Original strand, 36292792 - 36292862
Alignment:
Q  22 tgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||| |||||||||| ||||||||||||| ||| || |||||||||||||| || | || |||||||||    
T  36292792 tgtatcgaaagtagtaacatttattgattgttttggttagtgtaaaatgtcaaaaagtaatcattaaaaag 36292862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 5374421 - 5374348
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||| |||||||||||||  | || |||||||| ||||||||| ||||||||||| | |||| ||||||||||    
T  5374421 tattgcatcaaaagtagtatcaattgttgattgtcttgatttgtataaaatgtcaaaatatgacaattaaaaag 5374348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 18781652 - 18781721
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaa 88  Q
    ||||| |||||||||| ||||| ||||||||| | || |||||||||||||||| | |||||| ||||||    
T  18781652 tattgcatcaaaagtaataataattattgattatcttaatttgtgtaaaatgtcgaaaaatgacaattaa 18781721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 22828472 - 22828383
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| |||||||||||||  | |||||| |||| ||| ||||||||||||||||| |  ||| ||||||||||||| ||| || |||||    
T  22828472 tattgcatcaaaagtagtagcaattattggttgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtatt 22828383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 42133211 - 42133260
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaat 69  Q
    |||||||||||| |||||| ||||||||||||| ||| ||||||||||||    
T  42133211 attgtatcaaaaatagtaacatttattgattgttttggtttgtgtaaaat 42133260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 52677214 - 52677157
Alignment:
Q  42 ttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    ||||||||||| ||| ||||||||||||||||| |  ||| |||||||||||||||||    
T  52677214 ttattgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatgga 52677157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 6195197 - 6195273
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | |||| |||||| ||| |||||| |||||||||| || ||| |||||||||||||    
T  6195197 tattgcatcaaaagtagtagcaattatggattgtcttggtttgtgaaaaatgtcaaaaagtgacaattaaaaaggaa 6195273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 31369979 - 31370027
Alignment:
Q  24 tatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtc 72  Q
    ||||||||||| ||| ||||||||| ||||||| |||||||||||||||    
T  31369979 tatcaaaagtaataacatttattgaatgtattggtttgtgtaaaatgtc 31370027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 35231863 - 35231939
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| || |||||||||||||||||| |  ||| |||||||||||||    
T  35231863 tattgcatcaaaagtagtatcaattgttgattgtcttaatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 35231939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 39683785 - 39683709
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| |||||||||||||| || |  |||||||||||||||||    
T  39683785 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtgaaaatgtgataattaaaaaggaa 39683709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 41955755 - 41955707
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaa 68  Q
    ||||||||||||||| ||||||||||||||| | ||| |||||||||||    
T  41955755 attgtatcaaaagtattaatatttattgattattttggtttgtgtaaaa 41955707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 44217879 - 44217955
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  44217879 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 44217955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 47751703 - 47751779
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||| |||||| ||||||  ||| | ||| ||||||||||||||||  || ||| |||||||||||||    
T  47751703 tattgtatcaaaaatagtaacatttataaattattttggtttgtgtaaaatgtcacaaagtgacaattaaaaaggaa 47751779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 55703093 - 55703169
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||| ||| | ||||||||||| ||| | | ||||||||||||| | |||| |||||||||||||    
T  55703093 tattgcatcaaaagtaataacaattattgattgtcttggtatatgtaaaatgtcaaaatatgacaattaaaaaggaa 55703169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 16664414 - 16664469
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    ||||| |||||||||||||  | || |||||||| |||||||||||||||||||||    
T  16664414 tattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaa 16664469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 27654813 - 27654742
Alignment:
Q  21 ttgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||||||||||| |||||||  |||| ||  ||||||||||| || || |||||| ||||||||||    
T  27654813 ttgtatcaaaagtagtaaaatttattagttgtcttagtttgtgtaaaaagttaaaaaatgacaattaaaaag 27654742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 34361229 - 34361276
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaa 67  Q
    ||||||||||||||||||| ||||||||||||| ||  ||||||||||    
T  34361229 attgtatcaaaagtagtaacatttattgattgtcttagtttgtgtaaa 34361276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 42513097 - 42513042
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    ||||| ||||||||||||| || || |||||||| |||||||||||||||| ||||    
T  42513097 tattgcatcaaaagtagtattaattgttgattgtcttgatttgtgtaaaatttcaa 42513042  T

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Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 43888156 - 43888230
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||| ||||||| ||||||||||| | ||| ||| |||||||| |||| || ||| |||||||||||||    
T  43888156 attgtatcaaa-gtagtaacatttattgattctcttggtttatgtaaaatatcaaaaagtgacaattaaaaaggaa 43888230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 47885058 - 47885003
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    ||||| |||||||||| ||||| ||||||||||| ||| || ||||||||||||||    
T  47885058 tattgcatcaaaagtaataataattattgattgttttggttcgtgtaaaatgtcaa 47885003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 12252265 - 12252355
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||| |||||||||| ||  | || |||||||| ||||||| ||||||||||||| | |||| | ||||||||||| ||| || ||||||    
T  12252265 tattgcatcaaaagtattatcaattgttgattgtcttgatttatgtaaaatgtcaaaatatgacagttaaaaaggaacggaggtagtatta 12252355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 31862051 - 31861981
Alignment:
Q  25 atcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||| | ||||||||| | ||  |||||||||||| |||| |||| | |||||||||||||    
T  31862051 atcaaaagtagtaacaattattgattatcttagtttgtgtaaaatttcaaaaaataacaattaaaaaggaa 31861981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 53691724 - 53691678
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaa 66  Q
    ||||||||||||||||||  ||||||||||||| ||| |||||||||    
T  53691724 attgtatcaaaagtagtatcatttattgattgtcttggtttgtgtaa 53691678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 44069204 - 44069277
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| ||||||||||    
T  44069204 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaag 44069277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 55935295 - 55935356
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||||| ||| |||||||||||||||| |||| || ||| | |||||||||||    
T  55935295 agtaacatttattgagtgtcttgatttgtgtaaaatatcaaaaagtgacagttaaaaaggaa 55935356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 8735562 - 8735638
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| |||||||||||| |||| |  ||| |||||||||||||    
T  8735562 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaa 8735638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 19093224 - 19093148
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | ||||||| | | ||| ||| ||||||||||||| |  ||| |||||||||||||    
T  19093224 tattgcatcaaaagtagtaacaattattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaa 19093148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 19527291 - 19527215
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||  | || |||||| | ||| ||||||||||| ||||| |  ||| |||||||||||||    
T  19527291 tattgtatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaacgtcaaaatgtgacaattaaaaaggaa 19527215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 29295527 - 29295599
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| ||| |||||||||  | ||||||||||| ||| |||||||||||| |||| |  |||||||||||||    
T  29295527 tattgcatcgaaagtagtatcaattattgattgtcttggtttgtgtaaaatatcaaaatgtgataattaaaaa 29295599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 30151847 - 30151895
Alignment:
Q  21 ttgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaat 69  Q
    |||||||||||| ||||| ||||||||| ||| ||| ||||||||||||    
T  30151847 ttgtatcaaaagcagtaacatttattgaatgtcttggtttgtgtaaaat 30151895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 30939329 - 30939417
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||||||||||||| ||  |||||||||  || ||| |||||||||||  |||| | |||| ||||||||||||| ||| || |||||    
T  30939329 attgtatcaaaagtactaccatttattgaccgtcttggtttgtgtaaaaaatcaaaatatgacaattaaaaaggaacggaggtagtatt 30939417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 42099881 - 42099953
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| |||||||||||||| | ||||||||||| ||| |||||||  |||||||| |  ||| |||||||||    
T  42099881 tattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtttaatgtcaaaatgtgacaattaaaaa 42099953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 46872094 - 46872170
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| |||| ||||||||    
T  46872094 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaatttaaaaggaa 46872170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 50623586 - 50623638
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgt 71  Q
    |||||||||||||||||||  | || |||||||| ||| ||||||||||||||    
T  50623586 tattgtatcaaaagtagtatcaatttttgattgtcttggtttgtgtaaaatgt 50623638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 52977985 - 52977945
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaa 74  Q
    ||||||||||||||||| | ||| |||||||||||||||||    
T  52977985 agtaatatttattgattatcttggtttgtgtaaaatgtcaa 52977945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 147197 - 147109
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| || ||| ||||||||||||| ||| || |||||    
T  147197 attgtatcaaaagtagtaacatttattaattgttttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggaggtagtatt 147109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 9838193 - 9838117
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||  |||||| |||||||||||||    
T  9838193 tattgtatcaaaagtagtaacatttattgattgttttgatttgtgtaaaatatcacaaaatgacaattaaaaaggaa 9838117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 11129002 - 11129077
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| || ||| |||||||||||||    
T  11129002 attgtatcaaaagtagtaacatttattaattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 11129077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 30416146 - 30416070
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| | ||||||||||| ||| ||| ||||||||||||| | ||||||||||||||||||    
T  30416146 tattgtatcaaaagtagtaacaattattgattgtcttggtttatgtaaaatgtcaacatatgataattaaaaaggaa 30416070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 11676685 - 11676606
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| || | | ||||||||| |||||||    
T  11676685 attgtatcaaaagtagtaatatttattgattgtcttggtttgtgtaaaatatcaaaaagtaacaattaaaaatgaatgga 11676606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 24949278 - 24949353
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||| |||| | |||||||||||||    
T  24949278 attgtatcaaaagtagtaacatttattgattgttttggtttgtgtaaaatatcaaaaaataacaattaaaaaggaa 24949353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 23777466 - 23777542
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| ||||||| | ||| ||| ||||||||||||||||| || ||| |||||||||||||    
T  23777466 tattgtatcaaaagtagtaacatttatttaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 23777542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 26485756 - 26485680
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||| ||||||||| ||| ||| ||| ||||||||||||| || ||| |||||||||||||    
T  26485756 tattgtatcaaaagtagtaacatttattgaatgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaaggaa 26485680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 7632108 - 7632032
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||| |||||||| ||||||||||| ||||||| | ||||||||||| || |||| ||||||||||||    
T  7632108 tattgcatcaaaaatagtaataattattgattgtcttgatttatataaaatgtcaaaaagtgattattaaaaaggaa 7632032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 22050218 - 22050294
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | ||||||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  22050218 tattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 22050294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 26470794 - 26470718
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||| | ||||||||||| ||| ||| ||||||||||||| || ||| |||||||||||||    
T  26470794 tattgcatcaaaagtagtaacaattattgattgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaaggaa 26470718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 7170323 - 7170398
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||||||   || |||||  |||||||||||||    
T  7170323 attgtatcaaaagtagtaacatttattgattgtcttaatttgtgtaaaatactaaaaaatggcaattaaaaaggaa 7170398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 7056211 - 7056137
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaagg 93  Q
    ||||| ||||||||||  |||| ||||||||| | ||||||||||||||||||||| || ||| |||||||||||    
T  7056211 tattgcatcaaaagtaaaaataattattgattatcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaagg 7056137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 19645788 - 19645710
Alignment:
Q  24 tatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagt 102  Q
    ||||||||||||||| || |||||||||| ||  ||||||||||||||||| || ||| ||||||||| ||| ||||||    
T  19645788 tatcaaaagtagtaacatctattgattgtcttagtttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacggaagt 19645710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 34730732 - 34730805
Alignment:
Q  21 ttgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||| ||| ||||| ||| ||| ||||| |||||| |||| ||||||||||||||||||||    
T  34730732 ttgtatcaaaagtagtaacattcattgaatgtcttggtttgtataaaatatcaa-aaatgataattaaaaaggaa 34730805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 8176603 - 8176675
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| ||||||||||| || | ||||||||||| |||||||||||||||||| || || ||| |||||||||    
T  8176603 tattgcatcaaaagtagaaacaattattgattgtcttgatttgtgtaaaatgttaaaaagtgacaattaaaaa 8176675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 17124056 - 17123976
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatgga 99  Q
    ||||| |||||||||||||  | ||||||||||| ||  ||||||||||||||||| |  ||| |||||||||||||||||    
T  17124056 tattgcatcaaaagtagtatcaattattgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatgga 17123976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 17251326 - 17251250
Alignment:
Q  20 attgtatcaaaagtagtaatattta-ttgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||||||| | ||| |||||||| ||| |||||||||||||| || || ||| |||||||||||||    
T  17251326 attgtatcaaaagtagtaacacttaattgattgtcttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaa 17251250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 22400630 - 22400582
Alignment:
Q  24 tatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtc 72  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  22400630 tatcaaaagtagtaacatttattgaatgtattggtttgtgtaaaatgtc 22400582  T

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Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 30388936 - 30389012
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| ||||||| ||||| || || |||||||| ||| ||||||||||||||||| |  |||||||||||||||||    
T  30388936 tattgcatcaaaaatagtattaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaaaaggaa 30389012  T

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Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 7235609 - 7235643
Alignment:
Q  18 gtattgtatcaaaagtagtaatatttattgattgt 52  Q
    |||||||||||||||||||||||||||||||||||    
T  7235609 gtattgtatcaaaagtagtaatatttattgattgt 7235643  T

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Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 34607270 - 34607344
Alignment:
Q  21 ttgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||| ||| ||||| ||| ||| ||||| ||||||||||| || | | |||||||||||||    
T  34607270 ttgtatcaaaagtagtaacattcattgaatgtcttggtttgtataaaatgtcaaaaattaacaattaaaaaggaa 34607344  T

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Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 17601204 - 17601131
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    ||||||||||||||||| || ||||||||||||| ||  ||||||||||| ||||| |  ||| ||||||||||    
T  17601204 tattgtatcaaaagtagcaacatttattgattgtcttagtttgtgtaaaacgtcaaaatgtgacaattaaaaag 17601131  T

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Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 24356121 - 24356052
Alignment:
Q  23 gtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||||||||| ||||||||||||| ||| ||||  |||||| |||| || ||| ||||||||||    
T  24356121 gtatcaaaagtagtaacatttattgattgttttggtttggataaaatatcaaaaagtgacaattaaaaag 24356052  T

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Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 3621760 - 3621836
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  3621760 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 3621836  T

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Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 11431228 - 11431176
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgt 71  Q
    ||||||||||||||||| ||||  |||||||||| ||||||||||||| ||||    
T  11431228 tattgtatcaaaagtaggaatagctattgattgtcttgatttgtgtaacatgt 11431176  T

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Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 22784739 - 22784663
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||  ||||||||| | | ||| ||| |||||||||| || || ||| |||||||||||||    
T  22784739 tattgtatcaaaagtagtatcatttattgaatatcttggtttatgtaaaatgttaaaaagtgacaattaaaaaggaa 22784663  T

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Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 31244819 - 31244731
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||||||||||||| ||  ||||||||||||| ||| |||||||||||  |||| |  ||| ||||||||||||| ||| || |||||    
T  31244819 attgtatcaaaagtactaccatttattgattgtcttggtttgtgtaaaaaatcaaaatgtgacaattaaaaaggaacggatgtagtatt 31244731  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 30237425 - 30237485
Alignment:
Q  34 agtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||  |  |||||||||||||| || |||||| |||||||||||||    
T  30237425 agtaatatttattgattgttattttttgtgtaaaatgt-aaaaaatgacaattaaaaaggaa 30237485  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 1135252 - 1135176
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||| ||||||||||| ||| ||||||||| | ||| | | | ||||||||||||| || ||| |||||||||||||    
T  1135252 tattatatcaaaagtaataacatttattgagtttatcggtctctgtaaaatgtcaaaaagtgacaattaaaaaggaa 1135176  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 1249709 - 1249785
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||| |||||| ||||||||||||| ||  ||| | |||||| |||  || ||| |||||||||||||    
T  1249709 tattgtatcaaaaatagtaacatttattgattgtcttagtttatataaaatatcataaagtgacaattaaaaaggaa 1249785  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 1751502 - 1751430
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaa 91  Q
    ||||| |||||||||||||  | || |||||| | ||||||||||||||||||||| |  ||| |||||||||    
T  1751502 tattgcatcaaaagtagtatcaattgttgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaa 1751430  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 23923775 - 23923695
Alignment:
Q  28 aaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||||||||  | || |||||||| ||| |||||| |||||||||| |  ||| ||||||||||||||||| || |||||    
T  23923775 aaaagtagtatcaattgttgattgtcttggtttgtgcaaaatgtcaaaatgtgacaattaaaaaggaatggatgtagtatt 23923695  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 24663549 - 24663625
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||| |||||||||| ||  | || |||||||| ||| ||||||||||||||||| |  ||| |||||||||||||    
T  24663549 tattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaa 24663625  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 33260871 - 33260951
Alignment:
Q  20 attgtatcaaaagtagtaa-----tatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||||     |||||||||||| | ||| ||||||||||||||||| || ||| | ||| |||||||    
T  33260871 attgtatcaaaagtagtaacattatatttattgattatcttggtttgtgtaaaatgtcaaaaagtgacagttataaaggaa 33260951  T

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Target: scaffold2146 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 722 - 798
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||| ||||||| ||||||||||||||||||||||| |||||||||| || || ||| |||||||||||||    
T  722 tattgtatcagaagtagttatatttattgattgtattgatttatgtaaaatgttaaaaagtgaaaattaaaaaggaa 798  T

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Target: scaffold0135 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 30762 - 30673
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||||||||||||||||| ||||||| ||||| ||| |||||||||||| |||| || ||| |||||||||| || ||| || ||||||    
T  30762 attgtatcaaaagtagtaagatttattaattgtcttgttttgtgtaaaatttcaaaaagtgacaattaaaaagaaacggaggtagtatta 30673  T

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Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 419563 - 419490
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaag 92  Q
    |||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||||  || ||| ||||||||||    
T  419563 tattgtatcaaaagtagtaacatttattgattgtcttggtttatgtaaaatgtcacaaagtgacaattaaaaag 419490  T

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Target: scaffold0325 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 486 - 561
Alignment:
Q  20 attgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    ||||||||||||||| ||||||||||||||||| ||  |||  ||||||||| || |||||| |||||||||||||    
T  486 attgtatcaaaagtaataatatttattgattgtcttagtttacgtaaaatgttaaaaaatgacaattaaaaaggaa 561  T

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Target: scaffold0274 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 308 - 235
Alignment:
Q  21 ttgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaa 95  Q
    |||||||||||||||||| ||| ||||| ||| ||| ||||| |||||| |||| ||||||||||||||||||||    
T  308 ttgtatcaaaagtagtaacattcattgaatgtcttggtttgtataaaatatcaa-aaatgataattaaaaaggaa 235  T

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Target: scaffold0280 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 108
Target Start/End: Original strand, 8324 - 8413
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatt 108  Q
    ||||| |||||||||||||  | || |||||||| ||| ||||||||||||||||| |  ||| ||||||||||||| ||| || |||||    
T  8324 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtatt 8413  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 49316 - 49406
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaataaatgataattaaaaaggaatggaagttgtatta 109  Q
    ||||| |||||||||||||  | || |||||||| ||| |||| |||||||||||| |  ||| ||||||||||||| ||| || ||||||    
T  49316 tattgcatcaaaagtagtatcaattgttgattgtcttggtttgcgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagtatta 49406  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 77258 - 77310
Alignment:
Q  19 tattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgt 71  Q
    ||||| |||||||||||||  | || |||||||| ||||||||||||||||||    
T  77258 tattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgt 77310  T

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