View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7800_high_18 (Length: 318)

Name: NF7800_high_18
Description: NF7800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7800_high_18
NF7800_high_18
[»] chr1 (3 HSPs)
chr1 (16-297)||(42485711-42485992)
chr1 (72-144)||(28503506-28503578)
chr1 (77-113)||(44803276-44803312)
[»] chr3 (4 HSPs)
chr3 (188-297)||(49198629-49198735)
chr3 (38-110)||(28226159-28226230)
chr3 (38-115)||(36476406-36476482)
chr3 (77-113)||(37059496-37059532)
[»] chr4 (6 HSPs)
chr4 (206-274)||(41487979-41488047)
chr4 (188-295)||(22157730-22157837)
chr4 (87-137)||(2771064-2771114)
chr4 (77-127)||(43336996-43337046)
chr4 (78-127)||(12585570-12585619)
chr4 (57-137)||(36414494-36414573)
[»] chr8 (3 HSPs)
chr8 (188-297)||(42742978-42743087)
chr8 (38-110)||(8740628-8740699)
chr8 (82-110)||(29421015-29421043)
[»] chr7 (7 HSPs)
chr7 (188-297)||(35675089-35675198)
chr7 (229-282)||(9903131-9903184)
chr7 (77-114)||(35890900-35890937)
chr7 (50-114)||(36352008-36352073)
chr7 (95-147)||(37710103-37710155)
chr7 (77-113)||(7263008-7263044)
chr7 (82-134)||(46243319-46243371)
[»] chr5 (4 HSPs)
chr5 (238-297)||(35280938-35280997)
chr5 (38-115)||(25346231-25346307)
chr5 (37-115)||(20735146-20735223)
chr5 (63-115)||(29413559-29413611)
[»] chr2 (4 HSPs)
chr2 (188-297)||(9760511-9760620)
chr2 (188-297)||(12772381-12772490)
chr2 (230-282)||(27447564-27447616)
chr2 (77-115)||(9547137-9547175)
[»] chr6 (2 HSPs)
chr6 (57-136)||(6658534-6658612)
chr6 (61-136)||(30938417-30938493)
[»] scaffold0343 (1 HSPs)
scaffold0343 (66-110)||(8612-8656)


Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 16 - 297
Target Start/End: Original strand, 42485711 - 42485992
Alignment:
Q  16 attattctactaatttatgtaatttttggttacgtagctttgtggctagaaattctcattttaagatgaataagtagggtgttcgggattcgaactccgg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  42485711 attattctactaatttatgtaatttttggttacgtagctttgtggctagaaattctcattttatgatgaataagtagggtgttcgggattcgaactccag 42485810  T
Q  116 tccttatatatattatgcaatacctctaccatataagttaaactcacggagacatgctaattttagtgtggaaaatgctttttctcgtgagagaatatca 215  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  42485811 tccttatatatactatgcaatgcctctaccatataagttaaactcacggagacatgctaattttagtgtgggaaatgttttttctcgtgagagaatatca 42485910  T
Q  216 agcgaataaaccacgacaatagctggttagttttgattggaggtttatttcttaatttctgttttttcagcaagcacctcct 297  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42485911 agcgaatagaccacgacaatagctggttagttttgattggaggtttatttcttaatttctgttttttcagcaaacacctcct 42485992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 144
Target Start/End: Original strand, 28503506 - 28503578
Alignment:
Q  72 cattttaagatgaataagtagggtgttcgggattcgaactccggtccttatatatattatgcaatacctctac 144  Q
    ||||||||  |||| ||||||||||| ||||||||||||  |||||| || ||||| ||||||||| ||||||    
T  28503506 cattttaatgtgaagaagtagggtgtccgggattcgaacatcggtccctacatataatatgcaatatctctac 28503578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 44803312 - 44803276
Alignment:
Q  77 taagatgaataagtagggtgttcgggattcgaactcc 113  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  44803312 taagatgaataagtagggtgtacggggttcgaactcc 44803276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 188 - 297
Target Start/End: Complemental strand, 49198735 - 49198629
Alignment:
Q  188 aaatgctttttctcgtgagagaatatcaagcgaataaaccacgacaatagctggttagttttgattggaggtttatttcttaatttctgttttttcagca 287  Q
    ||||| |||||||||  ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||||    
T  49198735 aaatgttttttctcgctagagaatatcaagcgaatagaccacgacaatatctggttagttttgattggaggtttatttc---atttctgttttttcagca 49198639  T
Q  288 agcacctcct 297  Q
    ||||||||||    
T  49198638 agcacctcct 49198629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 28226159 - 28226230
Alignment:
Q  38 tttttggttacgtagctttgtggctagaaattctcattttaagatgaataagtagggtgttcgggattcgaac 110  Q
    |||||||||| |||| |||||||||| |||||  | ||| ||| ||||||||| |||||||||||||||||||    
T  28226159 tttttggttaggtagttttgtggctacaaatttacttttaaag-tgaataagtggggtgttcgggattcgaac 28226230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 36476482 - 36476406
Alignment:
Q  38 tttttggttacgtagctttgtggctagaaattctcattttaagatgaataagtagggtgttcgggattcgaactccgg 115  Q
    |||||||| | ||||| | |||||||| ||||| | ||| ||| ||||||||| ||||||||||| ||||||||||||    
T  36476482 tttttggtcaggtagcctagtggctaggaattcacttttaaag-tgaataagtggggtgttcggggttcgaactccgg 36476406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 37059532 - 37059496
Alignment:
Q  77 taagatgaataagtagggtgttcgggattcgaactcc 113  Q
    ||||||||||||||  |||||||||||||||||||||    
T  37059532 taagatgaataagtgaggtgttcgggattcgaactcc 37059496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 206 - 274
Target Start/End: Original strand, 41487979 - 41488047
Alignment:
Q  206 gagaatatcaagcgaataaaccacgacaatagctggttagttttgattggaggtttatttcttaatttc 274  Q
    |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||    
T  41487979 gagaatatcaagcgaatagagcacgacaatagctgattagttttgattggaggtttatttcttaatttc 41488047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 22157730 - 22157837
Alignment:
Q  188 aaatgctttttctcgtgagagaatatcaagcgaataaaccacgacaatagctggttagttttgattggaggtttatttcttaatttctgttttttcagca 287  Q
    ||||||||||||||  |||||||| ||||||||||  |||||||||||||||||||||||||||||||  ||||||| ||| ||||   |||||||||||    
T  22157730 aaatgctttttctcccgagagaatgtcaagcgaatcgaccacgacaatagctggttagttttgattggtagtttattccttgattttctttttttcagca 22157829  T
Q  288 agcacctc 295  Q
    | ||||||    
T  22157830 aacacctc 22157837  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 2771114 - 2771064
Alignment:
Q  87 aagtagggtgttcgggattcgaactccggtccttatatatattatgcaata 137  Q
    |||||||||||||||| ||||||||||||||| |  ||||| |||||||||    
T  2771114 aagtagggtgttcggggttcgaactccggtccctgcatataatatgcaata 2771064  T

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Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 43337046 - 43336996
Alignment:
Q  77 taagatgaataagtagggtgttcgggattcgaactccggtccttatatata 127  Q
    |||||||||||||| ||||||||||||||||||| ||| ||| || |||||    
T  43337046 taagatgaataagtggggtgttcgggattcgaaccccgatccctacatata 43336996  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 12585570 - 12585619
Alignment:
Q  78 aagatgaataagtagggtgttcgggattcgaactccggtccttatatata 127  Q
    |||||||||||||  |||||||||| |||||||||||| ||||| |||||    
T  12585570 aagatgaataagtgaggtgttcggggttcgaactccggcccttacatata 12585619  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 36414573 - 36414494
Alignment:
Q  57 gtggctagaaattctcattttaagatgaataagtagggtgttcgggattcgaactccggtccttatatatattatgcaata 137  Q
    |||||||||||||||| || |||| |||||||||| |||||| | | || ||||||||   ||| ||||||||||||||||    
T  36414573 gtggctagaaattctc-ttataaggtgaataagtaaggtgttagagctttgaactccgactcttgtatatattatgcaata 36414494  T

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Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 297
Target Start/End: Original strand, 42742978 - 42743087
Alignment:
Q  188 aaatgctttttctcgtgagagaatatcaagcgaataaaccacgacaatagctggttagttttgattggaggtttatttcttaatttctgttttttcagca 287  Q
    ||||||||||||| | |||||||||||| ||||||  |||||| |||||||||  |||||||||| |||||||||||| || ||||| |||||||| |||    
T  42742978 aaatgctttttcttgcgagagaatatcaggcgaatgcaccacggcaatagctgtatagttttgatgggaggtttatttattgatttccgttttttccgca 42743077  T
Q  288 agcacctcct 297  Q
    | ||||||||    
T  42743078 aacacctcct 42743087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 8740628 - 8740699
Alignment:
Q  38 tttttggttacgtagctttgtggctagaaattctcattttaagatgaataagtagggtgttcgggattcgaac 110  Q
    ||||| |||| ||||||| |||||||||| ||| | || ||||||||||||||||||||| |||  |||||||    
T  8740628 ttttttgttaggtagcttagtggctagaa-ttcaccttataagatgaataagtagggtgtccggagttcgaac 8740699  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 110
Target Start/End: Complemental strand, 29421043 - 29421015
Alignment:
Q  82 tgaataagtagggtgttcgggattcgaac 110  Q
    |||||||||||||||||||||||||||||    
T  29421043 tgaataagtagggtgttcgggattcgaac 29421015  T

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Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 297
Target Start/End: Complemental strand, 35675198 - 35675089
Alignment:
Q  188 aaatgctttttctcgtgagagaatatcaagcgaataaaccacgacaatagctggttagttttgattggaggtttatttcttaatttctgttttttcagca 287  Q
    ||||||| ||||| |||||||||| |||||| |||| |||||||||||||| || ||||| | |||||||||||||||||| | |||||||||||| | |    
T  35675198 aaatgctatttctagtgagagaatgtcaagcaaatacaccacgacaatagcgggctagttgtaattggaggtttatttcttgacttctgttttttccgta 35675099  T
Q  288 agcacctcct 297  Q
    | ||||||||    
T  35675098 aacacctcct 35675089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 9903131 - 9903184
Alignment:
Q  229 cgacaatagctggttagttttgattggaggtttatttcttaatttctgtttttt 282  Q
    ||||||||||||||||||||| ||||||||||||||| || | ||| |||||||    
T  9903131 cgacaatagctggttagttttaattggaggtttattttttgacttccgtttttt 9903184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 114
Target Start/End: Original strand, 35890900 - 35890937
Alignment:
Q  77 taagatgaataagtagggtgttcgggattcgaactccg 114  Q
    |||||||||||||| |||||||||||||||||||||||    
T  35890900 taagatgaataagtggggtgttcgggattcgaactccg 35890937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 36352073 - 36352008
Alignment:
Q  50 tagctttgtggctagaaattctca-ttttaagatgaataagtagggtgttcgggattcgaactccg 114  Q
    |||||| || ||||||||||| || ||||||||||||||||| | |||||||| ||||||||||||    
T  36352073 tagcttagtcgctagaaattcacaattttaagatgaataagtggagtgttcggtattcgaactccg 36352008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 37710155 - 37710103
Alignment:
Q  95 tgttcgggattcgaactccggtccttatatatattatgcaatacctctaccat 147  Q
    |||||| |||||||||||| |||| || ||||||||||||||| |||||||||    
T  37710155 tgttcgtgattcgaactccagtccctacatatattatgcaatatctctaccat 37710103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 7263008 - 7263044
Alignment:
Q  77 taagatgaataagtagggtgttcgggattcgaactcc 113  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  7263008 taagatgaataaatagggtgttcggggttcgaactcc 7263044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 46243371 - 46243319
Alignment:
Q  82 tgaataagtagggtgttcgggattcgaactccggtccttatatatattatgca 134  Q
    ||||||||| ||||||||||  ||||||||||| ||| |||||||| ||||||    
T  46243371 tgaataagtggggtgttcggagttcgaactccgatccctatatataatatgca 46243319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 238 - 297
Target Start/End: Complemental strand, 35280997 - 35280938
Alignment:
Q  238 ctggttagttttgattggaggtttatttcttaatttctgttttttcagcaagcacctcct 297  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  35280997 ctggttagttttgattggaggtttatttcttaatttctattttttcagcaagcacttcct 35280938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 25346307 - 25346231
Alignment:
Q  38 tttttggttacgtagctttgtggctagaaattctcattttaagatgaataagtagggtgttcgggattcgaactccgg 115  Q
    |||||||||| ||||||| |||||||||||||| | ||||||  |||||| || |||||| |||||||||||| ||||    
T  25346307 tttttggttatgtagcttagtggctagaaattcac-ttttaaagtgaatacgtggggtgtccgggattcgaaccccgg 25346231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 20735146 - 20735223
Alignment:
Q  37 atttttggttacgtagctttgtggctagaaattctcattttaagatgaataagtagggtgttcgggattcgaactccgg 115  Q
    ||||||||| | ||||| | |||||||||||||| | ||| ||| ||||||||| |||||| |||||||||||| ||||    
T  20735146 atttttggtcaggtagcctagtggctagaaattcacttttaaag-tgaataagtggggtgtccgggattcgaaccccgg 20735223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 29413559 - 29413611
Alignment:
Q  63 agaaattctcattttaagatgaataagtagggtgttcgggattcgaactccgg 115  Q
    |||||||| | ||||||||||||||||| ||||||||||| || |||| ||||    
T  29413559 agaaattcaccttttaagatgaataagtggggtgttcggggtttgaaccccgg 29413611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 297
Target Start/End: Original strand, 9760511 - 9760620
Alignment:
Q  188 aaatgctttttctcgtgagagaatatcaagcgaataaaccacgacaatagctggttagttttgattggaggtttatttcttaatttctgttttttcagca 287  Q
    ||||||| ||||| |||||||||| |||||| |||| |||||||||||||| |  ||||||| ||| |||||||||||||| | |||||||||||| | |    
T  9760511 aaatgctatttctagtgagagaatgtcaagcaaatacaccacgacaatagcggactagttttaatttgaggtttatttcttgacttctgttttttccgta 9760610  T
Q  288 agcacctcct 297  Q
    | ||||||||    
T  9760611 aacacctcct 9760620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 297
Target Start/End: Original strand, 12772381 - 12772490
Alignment:
Q  188 aaatgctttttctcgtgagagaatatcaagcgaataaaccacgacaatagctggttagttttgattggaggtttatttcttaatttctgttttttcagca 287  Q
    |||| |||||||||   ||||||| ||||| |||||  ||| || |||||| || ||||||||||||||| |||||||||| ||||  ||||||||||||    
T  12772381 aaatactttttctcacaagagaatgtcaagggaataggccaagataatagccggctagttttgattggagatttatttcttgatttacgttttttcagca 12772480  T
Q  288 agcacctcct 297  Q
    | ||||||||    
T  12772481 aacacctcct 12772490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 27447564 - 27447616
Alignment:
Q  230 gacaatagctggttagttttgattggaggtttatttcttaatttctgtttttt 282  Q
    |||||||||||||||||| |||||||||| || ||| || |||||||||||||    
T  27447564 gacaatagctggttagttatgattggaggattgtttttttatttctgtttttt 27447616  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 115
Target Start/End: Original strand, 9547137 - 9547175
Alignment:
Q  77 taagatgaataagtagggtgttcgggattcgaactccgg 115  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  9547137 taagatgaataagtggggtgttcgggattcgaaccccgg 9547175  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 136
Target Start/End: Original strand, 6658534 - 6658612
Alignment:
Q  57 gtggctagaaattctcattttaagatgaataagtagggtgttcgggattcgaactccggtccttatatatattatgcaat 136  Q
    |||||||||||||||| |||||||  |||||||| |||||| |||| ||||||| |||| || |  ||||||||||||||    
T  6658534 gtggctagaaattctc-ttttaaggagaataagtggggtgtccggggttcgaaccccggcccctgcatatattatgcaat 6658612  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 30938493 - 30938417
Alignment:
Q  61 ctagaaattctcatttt-aagatgaataagtagggtgttcgggattcgaactccggtccttatatatattatgcaat 136  Q
    |||||||||||| |||| |||  |||||||||||||||  ||| ||||||| ||||||| |  ||||||||||||||    
T  30938493 ctagaaattctccttttcaaggagaataagtagggtgtctggggttcgaaccccggtccctgcatatattatgcaat 30938417  T

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Target: scaffold0343 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 110
Target Start/End: Complemental strand, 8656 - 8612
Alignment:
Q  66 aattctcattttaagatgaataagtagggtgttcgggattcgaac 110  Q
    ||||| |||| |||| ||||||||||||||||||||| |||||||    
T  8656 aattcacattataaggtgaataagtagggtgttcggggttcgaac 8612  T

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