View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7800_low_11 (Length: 375)

Name: NF7800_low_11
Description: NF7800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7800_low_11
NF7800_low_11
[»] chr1 (84 HSPs)
chr1 (18-333)||(1815306-1815621)
chr1 (18-202)||(1843412-1843595)
chr1 (18-202)||(1857423-1857606)
chr1 (18-202)||(1869021-1869204)
chr1 (261-375)||(6427482-6427596)
chr1 (263-375)||(47989515-47989627)
chr1 (262-373)||(9828064-9828175)
chr1 (262-375)||(31694638-31694751)
chr1 (265-375)||(1486646-1486750)
chr1 (255-375)||(32461385-32461504)
chr1 (262-375)||(40917769-40917880)
chr1 (263-375)||(5944301-5944413)
chr1 (263-375)||(18556385-18556497)
chr1 (265-375)||(17778567-17778670)
chr1 (286-375)||(6612123-6612212)
chr1 (202-262)||(19326856-19326916)
chr1 (295-373)||(9629861-9629939)
chr1 (295-373)||(27471527-27471605)
chr1 (263-373)||(25361906-25362012)
chr1 (262-373)||(25934636-25934747)
chr1 (262-333)||(37598880-37598951)
chr1 (262-332)||(5898205-5898275)
chr1 (34-124)||(9229131-9229221)
chr1 (263-333)||(18337378-18337448)
chr1 (264-375)||(40258874-40258974)
chr1 (311-375)||(28273065-28273129)
chr1 (313-373)||(44482250-44482310)
chr1 (264-375)||(21032224-21032335)
chr1 (304-375)||(30173732-30173803)
chr1 (263-333)||(18190048-18190118)
chr1 (263-333)||(22515827-22515897)
chr1 (307-373)||(34371733-34371799)
chr1 (263-333)||(46348323-46348393)
chr1 (269-374)||(6332689-6332794)
chr1 (263-344)||(17408740-17408821)
chr1 (330-375)||(24577182-24577227)
chr1 (335-375)||(1815275-1815315)
chr1 (262-334)||(2896060-2896132)
chr1 (335-375)||(18337347-18337387)
chr1 (265-333)||(29163323-29163391)
chr1 (265-333)||(42359391-42359459)
chr1 (335-375)||(51410043-51410083)
chr1 (301-365)||(52284731-52284794)
chr1 (263-374)||(15449170-15449272)
chr1 (329-375)||(113317-113363)
chr1 (295-373)||(6414963-6415040)
chr1 (330-375)||(1704988-1705033)
chr1 (286-375)||(12611984-12612073)
chr1 (262-375)||(16164243-16164356)
chr1 (260-333)||(43492431-43492504)
chr1 (317-373)||(5376483-5376539)
chr1 (265-329)||(16297223-16297287)
chr1 (335-375)||(22515888-22515928)
chr1 (335-375)||(22881617-22881657)
chr1 (268-328)||(26830641-26830701)
chr1 (335-375)||(38078662-38078702)
chr1 (335-375)||(42359450-42359490)
chr1 (262-317)||(9690212-9690267)
chr1 (207-265)||(19330311-19330370)
chr1 (336-375)||(21378596-21378635)
chr1 (263-334)||(27965940-27966011)
chr1 (328-375)||(35919270-35919317)
chr1 (268-331)||(40181922-40181984)
chr1 (286-333)||(51410074-51410121)
chr1 (263-313)||(2218297-2218347)
chr1 (329-375)||(8117052-8117098)
chr1 (263-309)||(16812629-16812675)
chr1 (339-373)||(31015063-31015097)
chr1 (264-333)||(5927281-5927350)
chr1 (37-106)||(9119028-9119097)
chr1 (37-110)||(9161351-9161424)
chr1 (338-375)||(18471318-18471355)
chr1 (286-322)||(6427595-6427631)
chr1 (40-116)||(9170171-9170247)
chr1 (40-116)||(9199738-9199814)
chr1 (40-116)||(9218254-9218330)
chr1 (335-367)||(19058857-19058889)
chr1 (335-375)||(21620973-21621013)
chr1 (335-375)||(28663626-28663666)
chr1 (335-375)||(31672896-31672936)
chr1 (265-329)||(33202956-33203020)
chr1 (262-329)||(34741899-34741966)
chr1 (203-262)||(40524962-40525022)
chr1 (335-375)||(46348384-46348424)
[»] chr7 (60 HSPs)
chr7 (263-375)||(24339660-24339772)
chr7 (262-375)||(5409770-5409877)
chr7 (265-375)||(26033392-26033502)
chr7 (262-375)||(7438724-7438837)
chr7 (263-375)||(43027404-43027510)
chr7 (263-333)||(598257-598327)
chr7 (263-375)||(25822675-25822785)
chr7 (262-375)||(9778518-9778625)
chr7 (300-375)||(11665406-11665481)
chr7 (263-375)||(32093954-32094061)
chr7 (263-375)||(2334268-2334379)
chr7 (283-375)||(21560521-21560613)
chr7 (263-333)||(21880201-21880271)
chr7 (316-375)||(9408316-9408375)
chr7 (325-375)||(18039017-18039067)
chr7 (263-333)||(21864857-21864927)
chr7 (260-333)||(15680858-15680931)
chr7 (268-375)||(13770709-13770810)
chr7 (264-367)||(4794915-4795018)
chr7 (306-373)||(26329354-26329421)
chr7 (263-313)||(21568561-21568611)
chr7 (287-373)||(27229264-27229350)
chr7 (295-373)||(32308140-32308218)
chr7 (317-375)||(11272569-11272629)
chr7 (264-333)||(22484074-22484143)
chr7 (264-333)||(32287404-32287473)
chr7 (324-375)||(13300428-13300479)
chr7 (271-369)||(6630849-6630947)
chr7 (263-321)||(29763129-29763187)
chr7 (263-340)||(38804489-38804567)
chr7 (267-317)||(40287306-40287356)
chr7 (335-375)||(3991342-3991382)
chr7 (283-367)||(6028651-6028735)
chr7 (335-375)||(19213821-19213861)
chr7 (335-375)||(25481920-25481960)
chr7 (263-333)||(7133212-7133283)
chr7 (282-373)||(15902842-15902933)
chr7 (270-313)||(18215144-18215187)
chr7 (330-373)||(27945061-27945104)
chr7 (286-333)||(33994261-33994308)
chr7 (262-331)||(1401076-1401143)
chr7 (263-333)||(5835296-5835366)
chr7 (256-322)||(17852060-17852126)
chr7 (263-333)||(18212973-18213043)
chr7 (263-333)||(24105727-24105797)
chr7 (263-373)||(38134335-38134445)
chr7 (263-313)||(40131939-40131989)
chr7 (263-328)||(1433513-1433578)
chr7 (318-375)||(1885591-1885648)
chr7 (263-312)||(6490786-6490835)
chr7 (334-375)||(11061076-11061117)
chr7 (330-375)||(18215182-18215227)
chr7 (290-367)||(22801697-22801774)
chr7 (259-312)||(35749957-35750010)
chr7 (334-375)||(48438564-48438605)
chr7 (286-330)||(8234198-8234242)
chr7 (343-375)||(13557750-13557782)
chr7 (263-315)||(14729770-14729822)
chr7 (281-373)||(19206070-19206162)
chr7 (329-373)||(22602705-22602749)
[»] chr6 (60 HSPs)
chr6 (263-375)||(16766715-16766827)
chr6 (262-375)||(8365447-8365560)
chr6 (263-375)||(8713998-8714110)
chr6 (263-375)||(9107299-9107411)
chr6 (263-375)||(10770607-10770715)
chr6 (286-375)||(9522909-9522998)
chr6 (263-375)||(5970037-5970149)
chr6 (264-375)||(31384938-31385048)
chr6 (262-373)||(10339053-10339165)
chr6 (263-375)||(17435217-17435329)
chr6 (262-373)||(18367856-18367967)
chr6 (267-345)||(23130405-23130483)
chr6 (263-373)||(25038000-25038110)
chr6 (263-333)||(28152147-28152217)
chr6 (262-373)||(17327589-17327694)
chr6 (263-375)||(3209400-3209518)
chr6 (265-375)||(12696342-12696446)
chr6 (262-333)||(28715344-28715415)
chr6 (263-333)||(7378028-7378098)
chr6 (263-333)||(24645530-24645600)
chr6 (263-333)||(34595183-34595253)
chr6 (263-372)||(7248379-7248488)
chr6 (262-371)||(10294129-10294238)
chr6 (276-373)||(26562709-26562806)
chr6 (290-373)||(16488546-16488629)
chr6 (262-375)||(8776907-8777014)
chr6 (286-375)||(17302575-17302664)
chr6 (335-375)||(403865-403905)
chr6 (265-373)||(5000557-5000665)
chr6 (335-375)||(34595152-34595192)
chr6 (262-333)||(4877992-4878062)
chr6 (266-313)||(9025448-9025495)
chr6 (262-333)||(16833357-16833428)
chr6 (263-345)||(32839571-32839654)
chr6 (266-333)||(32978842-32978909)
chr6 (330-372)||(9911524-9911566)
chr6 (264-330)||(17841530-17841596)
chr6 (263-373)||(34073278-34073386)
chr6 (264-312)||(6665282-6665331)
chr6 (335-375)||(7801157-7801197)
chr6 (335-375)||(7977831-7977871)
chr6 (263-373)||(9629403-9629513)
chr6 (336-375)||(16833326-16833365)
chr6 (266-339)||(8389411-8389484)
chr6 (307-373)||(9195727-9195793)
chr6 (287-333)||(9658928-9658974)
chr6 (264-318)||(31959214-31959268)
chr6 (318-367)||(21395292-21395341)
chr6 (265-306)||(26178620-26178661)
chr6 (334-375)||(27904036-27904077)
chr6 (335-375)||(426515-426555)
chr6 (335-375)||(853860-853900)
chr6 (335-375)||(1700370-1700410)
chr6 (335-375)||(7027260-7027300)
chr6 (265-333)||(7265535-7265603)
chr6 (335-375)||(26402681-26402721)
chr6 (335-375)||(31429004-31429044)
chr6 (339-375)||(31959177-31959213)
chr6 (335-375)||(32978900-32978940)
chr6 (263-327)||(33818023-33818087)
[»] chr2 (59 HSPs)
chr2 (263-375)||(11223793-11223904)
chr2 (262-375)||(37419761-37419874)
chr2 (263-357)||(26769547-26769641)
chr2 (263-375)||(30717459-30717571)
chr2 (263-365)||(35056896-35056998)
chr2 (265-374)||(15657883-15657992)
chr2 (264-370)||(27286222-27286328)
chr2 (263-373)||(34784911-34785021)
chr2 (263-347)||(27084304-27084388)
chr2 (263-333)||(18840953-18841023)
chr2 (263-375)||(30404790-30404891)
chr2 (264-373)||(44860340-44860449)
chr2 (265-375)||(2438661-2438760)
chr2 (265-372)||(36756275-36756382)
chr2 (263-365)||(24975255-24975356)
chr2 (263-373)||(32749754-32749864)
chr2 (275-372)||(28524447-28524544)
chr2 (316-375)||(4882678-4882737)
chr2 (268-375)||(23058389-23058483)
chr2 (263-373)||(18420363-18420473)
chr2 (263-329)||(21782744-21782810)
chr2 (263-329)||(38117099-38117165)
chr2 (263-312)||(12748737-12748786)
chr2 (264-333)||(28596518-28596587)
chr2 (263-375)||(12668352-12668464)
chr2 (335-375)||(19536398-19536438)
chr2 (259-375)||(28677927-28678037)
chr2 (262-333)||(37497169-37497241)
chr2 (262-333)||(15972922-15972993)
chr2 (290-373)||(36096331-36096414)
chr2 (263-333)||(24009344-24009414)
chr2 (329-375)||(33153442-33153488)
chr2 (305-375)||(34337152-34337217)
chr2 (263-333)||(37559026-37559096)
chr2 (268-333)||(12224272-12224337)
chr2 (275-375)||(14996171-14996264)
chr2 (263-324)||(15907851-15907912)
chr2 (201-262)||(39959414-39959475)
chr2 (263-328)||(41843500-41843565)
chr2 (263-328)||(42511322-42511387)
chr2 (335-375)||(5040752-5040792)
chr2 (335-375)||(18421981-18422021)
chr2 (265-333)||(19942314-19942382)
chr2 (261-333)||(20242665-20242737)
chr2 (262-334)||(30335465-30335536)
chr2 (263-373)||(18889519-18889630)
chr2 (310-373)||(24067273-24067336)
chr2 (335-374)||(37558996-37559035)
chr2 (263-373)||(22084756-22084871)
chr2 (263-372)||(29367283-29367382)
chr2 (334-375)||(18841013-18841054)
chr2 (335-375)||(974765-974805)
chr2 (300-344)||(4207905-4207949)
chr2 (335-375)||(15972891-15972931)
chr2 (335-375)||(20539675-20539715)
chr2 (335-375)||(21624285-21624325)
chr2 (263-319)||(31456560-31456616)
chr2 (335-371)||(44635520-44635556)
chr2 (263-307)||(44635568-44635612)
[»] scaffold0003 (2 HSPs)
scaffold0003 (263-374)||(241613-241724)
scaffold0003 (262-313)||(236913-236964)
[»] chr4 (73 HSPs)
chr4 (262-373)||(24613629-24613740)
chr4 (264-373)||(30982808-30982917)
chr4 (262-375)||(22234818-22234931)
chr4 (265-375)||(19312353-19312463)
chr4 (263-374)||(47264005-47264116)
chr4 (262-375)||(19482686-19482799)
chr4 (263-333)||(23292926-23292996)
chr4 (264-375)||(3947702-3947807)
chr4 (282-375)||(27706125-27706218)
chr4 (263-375)||(715545-715648)
chr4 (263-375)||(752871-752974)
chr4 (202-262)||(27442661-27442721)
chr4 (263-334)||(8423658-8423729)
chr4 (265-371)||(28000672-28000779)
chr4 (263-340)||(24343554-24343632)
chr4 (263-333)||(34306744-34306814)
chr4 (264-373)||(847971-848080)
chr4 (313-374)||(4383386-4383447)
chr4 (266-375)||(28084540-28084640)
chr4 (264-328)||(14465006-14465070)
chr4 (263-373)||(5414101-5414211)
chr4 (263-333)||(35157925-35157995)
chr4 (263-373)||(36635344-36635449)
chr4 (268-365)||(30838238-30838335)
chr4 (262-322)||(35161096-35161156)
chr4 (335-375)||(42640547-42640587)
chr4 (335-374)||(12797339-12797378)
chr4 (263-334)||(21345473-21345544)
chr4 (336-375)||(29205462-29205501)
chr4 (290-373)||(37496724-37496807)
chr4 (300-374)||(40481655-40481723)
chr4 (263-333)||(2361915-2361985)
chr4 (263-333)||(12895214-12895284)
chr4 (262-312)||(18513174-18513224)
chr4 (275-333)||(49431075-49431133)
chr4 (262-311)||(11596296-11596345)
chr4 (330-375)||(11596348-11596393)
chr4 (263-375)||(11931298-11931410)
chr4 (263-372)||(46083920-46084029)
chr4 (261-313)||(944600-944652)
chr4 (265-333)||(4157198-4157266)
chr4 (265-333)||(4157485-4157553)
chr4 (263-343)||(15724483-15724563)
chr4 (335-375)||(21945521-21945561)
chr4 (335-375)||(23292987-23293027)
chr4 (335-375)||(28964249-28964289)
chr4 (335-375)||(30298965-30299005)
chr4 (335-375)||(30327833-30327873)
chr4 (335-375)||(49431044-49431084)
chr4 (311-375)||(51701276-51701340)
chr4 (262-333)||(53381529-53381601)
chr4 (335-375)||(54580024-54580064)
chr4 (264-311)||(5922532-5922579)
chr4 (336-375)||(6485613-6485652)
chr4 (335-374)||(6879466-6879505)
chr4 (328-375)||(12895110-12895157)
chr4 (335-374)||(16073413-16073452)
chr4 (263-322)||(18966569-18966628)
chr4 (263-322)||(29205528-29205587)
chr4 (263-310)||(37203324-37203371)
chr4 (295-373)||(903942-904020)
chr4 (268-314)||(3712458-3712504)
chr4 (263-345)||(5225542-5225624)
chr4 (262-320)||(7214465-7214523)
chr4 (263-329)||(16886660-16886726)
chr4 (267-333)||(21945552-21945618)
chr4 (342-375)||(11651142-11651175)
chr4 (262-311)||(16184902-16184951)
chr4 (267-312)||(34594208-34594253)
chr4 (276-373)||(38148667-38148764)
chr4 (329-373)||(5775353-5775397)
chr4 (282-333)||(10133757-10133809)
chr4 (264-312)||(40965341-40965389)
[»] chr8 (69 HSPs)
chr8 (264-373)||(29447040-29447149)
chr8 (263-375)||(15816058-15816170)
chr8 (263-375)||(22651994-22652106)
chr8 (262-375)||(29510232-29510345)
chr8 (262-375)||(8343334-8343447)
chr8 (263-370)||(29447467-29447574)
chr8 (295-375)||(2572017-2572097)
chr8 (263-375)||(21465430-21465542)
chr8 (262-375)||(22197670-22197783)
chr8 (263-373)||(26902104-26902214)
chr8 (263-375)||(28745516-28745628)
chr8 (201-260)||(11686012-11686071)
chr8 (263-373)||(11927015-11927125)
chr8 (262-375)||(4673353-4673466)
chr8 (263-375)||(24858030-24858135)
chr8 (202-262)||(44206277-44206337)
chr8 (262-333)||(5813641-5813712)
chr8 (263-373)||(11944685-11944795)
chr8 (204-262)||(19177405-19177463)
chr8 (263-329)||(36450694-36450760)
chr8 (265-333)||(926730-926798)
chr8 (324-375)||(25566859-25566910)
chr8 (263-373)||(11803279-11803389)
chr8 (283-373)||(12570458-12570547)
chr8 (266-375)||(24727684-24727793)
chr8 (335-375)||(4948670-4948710)
chr8 (283-331)||(12570684-12570732)
chr8 (263-373)||(27067231-27067337)
chr8 (263-339)||(34450961-34451037)
chr8 (263-334)||(14134747-14134818)
chr8 (275-322)||(22943301-22943348)
chr8 (317-372)||(28384977-28385032)
chr8 (205-260)||(31343660-31343715)
chr8 (340-375)||(41831946-41831981)
chr8 (263-333)||(3951476-3951546)
chr8 (202-260)||(4863904-4863962)
chr8 (262-312)||(8343037-8343087)
chr8 (263-328)||(16641909-16641974)
chr8 (286-331)||(31557047-31557092)
chr8 (336-373)||(40332211-40332248)
chr8 (335-375)||(8342990-8343030)
chr8 (268-320)||(14639735-14639787)
chr8 (265-333)||(20679337-20679405)
chr8 (335-375)||(20873087-20873127)
chr8 (300-371)||(24362167-24362239)
chr8 (334-374)||(31557015-31557055)
chr8 (324-375)||(13436954-13437005)
chr8 (340-375)||(18407737-18407772)
chr8 (335-374)||(24613539-24613578)
chr8 (336-375)||(31514891-31514930)
chr8 (263-318)||(39820493-39820547)
chr8 (286-333)||(44462158-44462205)
chr8 (286-333)||(44469691-44469738)
chr8 (263-333)||(24413499-24413569)
chr8 (262-312)||(27213595-27213645)
chr8 (264-373)||(2035759-2035866)
chr8 (334-375)||(4298886-4298927)
chr8 (263-373)||(18964197-18964309)
chr8 (335-372)||(24669454-24669491)
chr8 (261-318)||(38487155-38487212)
chr8 (342-375)||(41838131-41838164)
chr8 (265-333)||(3025600-3025668)
chr8 (262-333)||(4298829-4298896)
chr8 (263-307)||(13436910-13436954)
chr8 (324-372)||(14692480-14692528)
chr8 (262-322)||(18407779-18407839)
chr8 (335-375)||(22596012-22596052)
chr8 (335-375)||(30077388-30077428)
chr8 (266-322)||(40332251-40332307)
[»] chr3 (64 HSPs)
chr3 (262-375)||(41961578-41961691)
chr3 (265-375)||(4987222-4987332)
chr3 (262-375)||(14209131-14209244)
chr3 (263-374)||(27505265-27505370)
chr3 (263-375)||(34185052-34185164)
chr3 (262-372)||(28812536-28812646)
chr3 (262-375)||(49651715-49651827)
chr3 (287-375)||(14832117-14832205)
chr3 (264-375)||(14216910-14217021)
chr3 (264-375)||(14223039-14223150)
chr3 (286-375)||(15796246-15796335)
chr3 (267-374)||(14829708-14829816)
chr3 (263-365)||(8039764-8039866)
chr3 (263-373)||(17005548-17005658)
chr3 (263-333)||(55401124-55401194)
chr3 (262-375)||(55212981-55213093)
chr3 (263-375)||(16789030-16789141)
chr3 (264-375)||(15999951-16000057)
chr3 (262-333)||(40993274-40993345)
chr3 (263-333)||(11252025-11252095)
chr3 (265-375)||(28918019-28918120)
chr3 (268-328)||(16192667-16192727)
chr3 (263-334)||(18426997-18427068)
chr3 (263-373)||(9800060-9800170)
chr3 (263-333)||(20503514-20503584)
chr3 (265-375)||(29508462-29508567)
chr3 (313-375)||(34910335-34910397)
chr3 (306-375)||(750590-750659)
chr3 (318-375)||(1509557-1509614)
chr3 (286-373)||(2620007-2620092)
chr3 (261-329)||(7171554-7171622)
chr3 (265-345)||(13806284-13806363)
chr3 (335-375)||(51206354-51206394)
chr3 (286-333)||(10955001-10955048)
chr3 (263-313)||(11610578-11610628)
chr3 (337-375)||(26508128-26508166)
chr3 (263-339)||(14223788-14223864)
chr3 (295-375)||(25064927-25065005)
chr3 (317-373)||(4990950-4991006)
chr3 (335-375)||(8587022-8587062)
chr3 (335-375)||(8593155-8593195)
chr3 (335-375)||(10954970-10955010)
chr3 (313-373)||(16192729-16192789)
chr3 (264-308)||(25211604-25211648)
chr3 (335-371)||(25775531-25775567)
chr3 (262-314)||(40052380-40052432)
chr3 (263-306)||(12083959-12084002)
chr3 (295-334)||(14338455-14338494)
chr3 (336-375)||(20503483-20503522)
chr3 (328-375)||(25948881-25948928)
chr3 (287-373)||(11665964-11666050)
chr3 (263-317)||(17276792-17276846)
chr3 (263-340)||(21211335-21211413)
chr3 (327-369)||(22774063-22774105)
chr3 (263-333)||(35222987-35223057)
chr3 (340-374)||(35994744-35994778)
chr3 (334-375)||(10268486-10268527)
chr3 (338-375)||(21256990-21257027)
chr3 (263-316)||(27277780-27277832)
chr3 (261-318)||(27903702-27903759)
chr3 (264-312)||(1389908-1389956)
chr3 (335-375)||(3865692-3865732)
chr3 (335-375)||(7928468-7928508)
chr3 (335-375)||(21479136-21479176)
[»] chr5 (50 HSPs)
chr5 (263-375)||(39698559-39698671)
chr5 (263-375)||(7677723-7677835)
chr5 (286-375)||(21522768-21522857)
chr5 (286-375)||(21533334-21533423)
chr5 (286-367)||(21542056-21542137)
chr5 (267-375)||(30183567-30183675)
chr5 (263-375)||(31084341-31084447)
chr5 (262-367)||(36642691-36642795)
chr5 (262-333)||(43564930-43565001)
chr5 (276-373)||(19579721-19579818)
chr5 (318-375)||(21351889-21351946)
chr5 (262-374)||(37328774-37328884)
chr5 (275-375)||(15382497-15382592)
chr5 (263-333)||(42893409-42893479)
chr5 (264-373)||(3966523-3966632)
chr5 (264-373)||(6401518-6401627)
chr5 (330-375)||(13287395-13287440)
chr5 (261-373)||(14873537-14873643)
chr5 (263-375)||(21576685-21576786)
chr5 (265-375)||(21190998-21191097)
chr5 (290-373)||(21814281-21814364)
chr5 (263-373)||(30098346-30098456)
chr5 (263-373)||(32766872-32766982)
chr5 (265-375)||(43001818-43001922)
chr5 (335-375)||(6247640-6247680)
chr5 (335-375)||(15884006-15884046)
chr5 (275-375)||(17088303-17088398)
chr5 (261-329)||(27932288-27932356)
chr5 (286-333)||(30502351-30502398)
chr5 (286-333)||(30542694-30542741)
chr5 (266-333)||(39268541-39268608)
chr5 (302-375)||(12641692-12641765)
chr5 (330-375)||(30135332-30135377)
chr5 (262-311)||(38464312-38464361)
chr5 (262-366)||(11685966-11686069)
chr5 (263-311)||(19820328-19820376)
chr5 (335-375)||(33178043-33178083)
chr5 (263-334)||(17123096-17123166)
chr5 (316-375)||(21319927-21319986)
chr5 (338-372)||(7218271-7218305)
chr5 (269-339)||(15588632-15588707)
chr5 (261-375)||(40131639-40131753)
chr5 (263-373)||(41091186-41091296)
chr5 (326-375)||(12199948-12199997)
chr5 (319-375)||(19552530-19552584)
chr5 (265-322)||(24238603-24238660)
chr5 (338-375)||(24906305-24906342)
chr5 (335-375)||(8420045-8420085)
chr5 (339-375)||(14674287-14674323)
chr5 (263-315)||(35017110-35017162)
[»] scaffold0123 (1 HSPs)
scaffold0123 (263-373)||(44454-44564)
[»] scaffold0019 (1 HSPs)
scaffold0019 (262-375)||(71743-71856)
[»] scaffold0136 (1 HSPs)
scaffold0136 (262-375)||(3777-3890)
[»] scaffold0086 (1 HSPs)
scaffold0086 (263-375)||(2946-3058)
[»] scaffold0044 (1 HSPs)
scaffold0044 (270-373)||(53200-53303)
[»] scaffold0171 (2 HSPs)
scaffold0171 (262-375)||(23529-23642)
scaffold0171 (328-375)||(23438-23485)
[»] scaffold0008 (1 HSPs)
scaffold0008 (265-373)||(263303-263411)
[»] scaffold0450 (1 HSPs)
scaffold0450 (263-375)||(8564-8676)
[»] scaffold0036 (1 HSPs)
scaffold0036 (265-373)||(9678-9786)
[»] scaffold0512 (1 HSPs)
scaffold0512 (263-333)||(4976-5046)
[»] scaffold0053 (1 HSPs)
scaffold0053 (263-333)||(8847-8917)
[»] scaffold0793 (1 HSPs)
scaffold0793 (263-375)||(4821-4924)
[»] scaffold0655 (2 HSPs)
scaffold0655 (201-262)||(4205-4266)
scaffold0655 (202-262)||(6261-6321)
[»] scaffold0652 (2 HSPs)
scaffold0652 (264-333)||(403-472)
scaffold0652 (335-375)||(463-503)
[»] scaffold0050 (1 HSPs)
scaffold0050 (286-333)||(70327-70374)
[»] scaffold0223 (1 HSPs)
scaffold0223 (326-375)||(20190-20239)
[»] scaffold0025 (1 HSPs)
scaffold0025 (335-375)||(23788-23828)
[»] scaffold0246 (1 HSPs)
scaffold0246 (300-374)||(19594-19662)
[»] scaffold0083 (2 HSPs)
scaffold0083 (286-333)||(45493-45540)
scaffold0083 (335-367)||(45531-45563)
[»] scaffold0361 (1 HSPs)
scaffold0361 (263-329)||(14580-14646)
[»] scaffold0021 (1 HSPs)
scaffold0021 (337-375)||(130500-130538)
[»] scaffold0623 (1 HSPs)
scaffold0623 (264-373)||(5926-6035)
[»] scaffold0154 (1 HSPs)
scaffold0154 (257-350)||(13456-13549)
[»] scaffold0122 (1 HSPs)
scaffold0122 (264-373)||(8686-8795)
[»] scaffold0306 (1 HSPs)
scaffold0306 (265-373)||(13420-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (265-373)||(21804-21907)
[»] scaffold0103 (1 HSPs)
scaffold0103 (306-375)||(51829-51890)
[»] scaffold0027 (1 HSPs)
scaffold0027 (335-375)||(46700-46740)
[»] scaffold0011 (1 HSPs)
scaffold0011 (335-375)||(17750-17790)
[»] scaffold0004 (2 HSPs)
scaffold0004 (335-371)||(123650-123686)
scaffold0004 (335-375)||(83178-83218)
[»] scaffold0380 (1 HSPs)
scaffold0380 (262-321)||(8662-8721)
[»] scaffold0057 (1 HSPs)
scaffold0057 (262-374)||(24044-24156)
[»] scaffold0039 (1 HSPs)
scaffold0039 (286-373)||(84925-85012)
[»] scaffold0018 (1 HSPs)
scaffold0018 (329-375)||(178813-178860)
[»] scaffold0475 (1 HSPs)
scaffold0475 (259-333)||(3357-3431)
[»] scaffold0168 (1 HSPs)
scaffold0168 (262-298)||(21372-21408)


Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 84)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 18 - 333
Target Start/End: Complemental strand, 1815621 - 1815306
Alignment:
Q  18 tgttcttgcggcgaactgcttgagacttataggagaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatggataagcac 117  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1815621 tgttcttgcggcgaactgtttgagacttataggggaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatggataagcac 1815522  T
Q  118 tcttggataaatgcagaccttaatgtagaggagagtccactacttgcttcatgaatcatcatctagcatttatgaacttggtgatgatagaatagaatat 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  1815521 tcttggatcaatgcagaccttaatgtagaggagagtccactacttgcttcatgaatcatcatctagcatttatgaatttggtgatgatagaaaagaatat 1815422  T
Q  218 ttgtcataattagttataatgattttcctgcaattatgttgtatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc 317  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| |||||||||||| ||||||||||||||||| |||||    
T  1815421 ttgtcgaaattagttataatgattttcctgcaattatgttgtatcctatgaatcacggtcactcctcagattaggcgtgtcccggtgtcggacatgtgtc 1815322  T
Q  318 gtgtctgacaccgaca 333  Q
    ||||| ||||||||||    
T  1815321 gtgtcggacaccgaca 1815306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 1843412 - 1843595
Alignment:
Q  18 tgttcttgcggcgaactgcttgagacttataggagaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatggataagcac 117  Q
    ||||||||||||||| || |||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1843412 tgttcttgcggcgaagtgtttgagacttagaggggaagaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatgaataagcac 1843511  T
Q  118 tcttggataaatgcagaccttaatgtagaggagagtccactacttgcttcatgaatcatcatctagcatttatgaacttggtgat 202  Q
    |||||||| || |  |||   |||||||||||||||    ||||||||||||||||||||||||||||||||||||| |||||||    
T  1843512 tcttggatcaaagatgactcaaatgtagaggagagt-aggtacttgcttcatgaatcatcatctagcatttatgaacctggtgat 1843595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 1857423 - 1857606
Alignment:
Q  18 tgttcttgcggcgaactgcttgagacttataggagaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatggataagcac 117  Q
    ||||||||||||||| || |||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1857423 tgttcttgcggcgaagtgtttgagacttagaggggaagaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatgaataagcac 1857522  T
Q  118 tcttggataaatgcagaccttaatgtagaggagagtccactacttgcttcatgaatcatcatctagcatttatgaacttggtgat 202  Q
    |||||||| || |  |||   |||||||||||||||    ||||||||||||||||||||||||||||||||||||| |||||||    
T  1857523 tcttggatcaaagatgactcaaatgtagaggagagt-aggtacttgcttcatgaatcatcatctagcatttatgaacctggtgat 1857606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 1869021 - 1869204
Alignment:
Q  18 tgttcttgcggcgaactgcttgagacttataggagaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatggataagcac 117  Q
    ||||||||||||||| || |||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1869021 tgttcttgcggcgaagtgtttgagacttagaggggaagaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatgaataagcac 1869120  T
Q  118 tcttggataaatgcagaccttaatgtagaggagagtccactacttgcttcatgaatcatcatctagcatttatgaacttggtgat 202  Q
    |||||||| ||||  |||   ||||||||||||||| |  | ||||||||||||||||||||||||| ||||||||| |||||||    
T  1869121 tcttggatcaatgatgactcaaatgtagaggagagt-cggttcttgcttcatgaatcatcatctagcttttatgaacctggtgat 1869204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 6427596 - 6427482
Alignment:
Q  261 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactga 360  Q
    ||||||||||||| ||||||  ||||||||||| |||||||||||||||||||||||||||| ||| || ||| ||||| |||||||||||||||| |||    
T  6427596 tcctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattga 6427497  T
Q  361 attatgtgatttttt 375  Q
    |||||||||||||||    
T  6427496 attatgtgatttttt 6427482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 47989627 - 47989515
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| |||||||| ||||||| |||| |||| |||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 47989528  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  47989527 tatgtgatttttt 47989515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 262 - 373
Target Start/End: Complemental strand, 9828175 - 9828064
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||| |||||| | |||||||||||||||||||||||||||||||||| |||| ||||||||||| |  | ||||||||||    
T  9828175 cctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaa 9828076  T
Q  362 ttatgtgatttt 373  Q
    ||||||||||||    
T  9828075 ttatgtgatttt 9828064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 31694638 - 31694751
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| |||||||||||| ||| ||||||||| | | |||| ||||| |||||||||| |||||||||||||||| ||| ||||||    
T  31694638 cctatgaagcacggacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaa 31694737  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  31694738 ttatgtgatttttt 31694751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 265 - 375
Target Start/End: Original strand, 1486646 - 1486750
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||      |||||| ||||||||||||| || |||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttataattacactgaatta 1486739  T
Q  365 tgtgatttttt 375  Q
    |||||||||||    
T  1486740 tgtgatttttt 1486750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 255 - 375
Target Start/End: Original strand, 32461385 - 32461504
Alignment:
Q  255 gttgtatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagtta 354  Q
    ||||||| ||||||||||| |||||||||  |||||||| |||||| ||||| ||||||||||||||| ||||||||||  ||||| ||||||||| |||    
T  32461385 gttgtatgctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgaca-cacaccaacacttgtaatta 32461483  T
Q  355 cactgaattatgtgatttttt 375  Q
    || | ||||||||||||||||    
T  32461484 cattaaattatgtgatttttt 32461504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 40917880 - 40917769
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||| | ||| |||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||| ||||||| ||||||| ||    
T  40917880 cctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaa 40917781  T
Q  362 ttatgtgatttttt 375  Q
    |  |||||||||||    
T  40917780 t--tgtgatttttt 40917769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 5944413 - 5944301
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||  ||||| ||| |||||||| | ||||||||||||||| |||| ||||| | || ||||| ||||||||||||| || |||||||||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaat 5944314  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  5944313 tatgtgatttttt 5944301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 18556385 - 18556497
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||||||| |||||||| |||||| |||||||| |||||||| ||||||||||| || |||||| | ||||||| ||||| | |||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaat 18556484  T
Q  363 tatgtgatttttt 375  Q
    |||||||| ||||    
T  18556485 tatgtgatatttt 18556497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 375
Target Start/End: Complemental strand, 17778670 - 17778567
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    |||||||||  ||||||||| |||||||||||||||||||||||||||||||||     |||||||||| |||||||||||||||| ||||||||   ||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacacgtgtcg----cgacaccgacacgacaccgacacttgtaattacactg---ta 17778578  T
Q  365 tgtgatttttt 375  Q
    |||||||||||    
T  17778577 tgtgatttttt 17778567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 6612123 - 6612212
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||| ||||| |||||||||||| | ||||||| |||| ||||| |||||||||||||||| |||||||||||||||| |||||||    
T  6612123 gattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaatttttt 6612212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 19326856 - 19326916
Alignment:
Q  202 tgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 262  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  19326856 tgatagaatagaatattagtcataattagttataattattttcctgtaattatgttgtatc 19326916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 9629861 - 9629939
Alignment:
Q  295 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||||||||||||| |||||||||| |||| ||||| ||||||||||||| || | |||||||||||| |||||||    
T  9629861 tgtcccggtgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgatttt 9629939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 27471527 - 27471605
Alignment:
Q  295 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||||||||||||||||||||| ||  ||||||| |||||||| |||| |||| ||||||||||||||||| ||||    
T  27471527 tgtcccggtgtcggacacgtgtcgtatccaacaccgatatgacaccaacacatgtaattacactgaattatgtgctttt 27471605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 373
Target Start/End: Complemental strand, 25362012 - 25361906
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| ||||||  || |||||||  ||| |||||||||||||  ||||||||| |||||||||| ||||| ||||| | || |||||||||||    
T  25362012 ctatgaagcacggacactcttcggattagg--tgttccggtgtcggaca--tgtcgtgtccgacaccgacacgacactgacacatataattacactgaat 25361917  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  25361916 tatgtgatttt 25361906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 373
Target Start/End: Complemental strand, 25934747 - 25934636
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||  ||| |||| | |||| ||||| ||||||||||||||| |||||||||| || |||||||| | || |||||||| |    
T  25934747 cctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgta 25934648  T
Q  362 ttatgtgatttt 373  Q
    || |||||||||    
T  25934647 ttttgtgatttt 25934636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 37598951 - 37598880
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||| |||||| ||| |||||||| ||||||  |||||||||||||||||||| ||||||||||    
T  37598951 cctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgaca 37598880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 5898205 - 5898275
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgac 332  Q
    ||||| |||||| |||||| ||| |||||| | ||||||||||| ||||||||||||||||||||||||||    
T  5898205 cctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgac 5898275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 9229221 - 9229131
Alignment:
Q  34 tgcttgagacttataggagaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatggataagcactcttgga 124  Q
    ||||||||||||| ||| ||||||||||| |||||||| ||||||||||||||  | |||||  | ||||||||||| |||||| ||||||    
T  9229221 tgcttgagacttaaaggcgaggaaagacctagcatgaaagaagtggctatggagctagaggggttaaggttaatggagaagcacccttgga 9229131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 18337448 - 18337378
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||| ||| ||| ||||||||||| ||||||||||||||| ||||| ||||||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgaca 18337378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 375
Target Start/End: Original strand, 40258874 - 40258974
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||  |||||| ||| |||||||| ||||| ||||||||||| ||||||||||||||           ||||||||||||| ||||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgac-----------accgacacttgtaattacactgaatt 40258962  T
Q  364 atgtgatttttt 375  Q
    ||||||||||||    
T  40258963 atgtgatttttt 40258974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 28273065 - 28273129
Alignment:
Q  311 acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||| |||| ||| | |||||||||||||||| |||||||||||||| |||||||||    
T  28273065 acgtgtcgtgtccgacatcgataggacaccgacacttgtaattacactgaattatatgatttttt 28273129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 373
Target Start/End: Complemental strand, 44482310 - 44482250
Alignment:
Q  313 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||||||||| |||||||||| ||||||||||| | || ||||||||||||||||||||||    
T  44482310 gtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattatgtgatttt 44482250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 21032335 - 21032224
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    ||||||||||||||||| ||  |||||||| | || || |||||||||| ||||||||| |||||| ||| |||||||||| ||||| ||| | | ||||    
T  21032335 tatgaagcacagacactccttggattaggcgtctctcgatgtcggacacatgtcgtgtccgacacccacacgacaccgacatttgtaattatatttaatt 21032236  T
Q  364 atgtgatttttt 375  Q
    | || |||||||    
T  21032235 aagtaatttttt 21032224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 30173732 - 30173803
Alignment:
Q  304 gtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||| |||||||||| || || |||| |||||||||||||||| ||||||||| |||||| |||||||    
T  30173732 gtcggacatgtgtcgtgtccgatacggacacgacaccgacacttgtaattacactgagttatgtaatttttt 30173803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 18190048 - 18190118
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||| || ||||| ||| |||||||  |||||||||||||||||||||| |||||||||| |||||    
T  18190048 ctatgaagcgcatacactcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgaca 18190118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 22515827 - 22515897
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||| ||| |||||||| |||| |||||||||| | |||||||||| ||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgaca 22515897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 373
Target Start/End: Complemental strand, 34371799 - 34371733
Alignment:
Q  307 ggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||||||||| || |||||| ||| ||||||||||| | || ||||||||||||||||||||||    
T  34371799 ggacacgtgtcgtatccgacaccaacacgacaccgacacatataattacactgaattatgtgatttt 34371733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 46348323 - 46348393
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||  ||| ||| |||| |||| ||||||||||||||||||||||| ||||||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 46348393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 269 - 374
Target Start/End: Complemental strand, 6332794 - 6332689
Alignment:
Q  269 agcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtg 368  Q
    ||||||||||||  || ||| |||||||||| |||||  |||| || |||  |  |||||| ||| |||||||| ||||||| |||||||||||||||||    
T  6332794 agcacagacactcatcggatcaggcatgtcctggtgttagacatgtatcgcattcgacaccaacacgacaccgatacttgtaattacactgaattatgtg 6332695  T
Q  369 attttt 374  Q
    ||||||    
T  6332694 attttt 6332689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 344
Target Start/End: Complemental strand, 17408821 - 17408740
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgaca 344  Q
    ||||||||||||||||||  ||||||||||  | ||  ||||||||||||||||||||||||| ||| |||  |||||||||    
T  17408821 ctatgaagcacagacactcttcagattaggtgtatcttggtgtcggacacgtgtcgtgtctgataccaacacaacaccgaca 17408740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 24577182 - 24577227
Alignment:
Q  330 gacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgatttttt 24577227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 1815315 - 1815275
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgatttttt 1815275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 334
Target Start/End: Original strand, 2896060 - 2896132
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 334  Q
    |||||||| ||  |||||||||  |||||||  ||||||||| |||||||| |||||||||||||||||||||    
T  2896060 cctatgaaacatggacacttcttggattaggtgtgtcccggtctcggacacatgtcgtgtctgacaccgacat 2896132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 18337387 - 18337347
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  18337387 gacaccgacacttgtaattacactgaattatgtgatttttt 18337347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 29163323 - 29163391
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||  ||||||||| |||||| | |||||||||||| | ||||||||||||| ||||||||||    
T  29163323 atgaagcacgaacacttctctgattagccgtgtcccggtgtcaggcacgtgtcgtgtccgacaccgaca 29163391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 42359391 - 42359459
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||| |||||| ||| |||||||| ||||||||||||||||||  ||| |||| ||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgaca 42359459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 51410083 - 51410043
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  51410083 gacaccgacacttgtaattacactgaattatgtgatttttt 51410043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 365
Target Start/End: Complemental strand, 52284794 - 52284731
Alignment:
Q  301 ggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattat 365  Q
    ||||||||||| ||||||||||||||||||| ||  |||||||||||||| ||| ||||||||||    
T  52284794 ggtgtcggacatgtgtcgtgtctgacaccgatat-tcaccgacacttgtaattatactgaattat 52284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 374
Target Start/End: Original strand, 15449170 - 15449272
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||||||||| ||  ||||||||||||| |||||||          |||||| |||||||| | ||||| |||||||||| ||||||| |||    
T  15449170 ctatgaagcacagacactccttggattaggcatgtctcggtgtca---------cgtgtccgacaccgatacgacacagacacttgtaattacactaaat 15449260  T
Q  363 tatgtgattttt 374  Q
    ||||||||||||    
T  15449261 tatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 113363 - 113317
Alignment:
Q  329 cgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgatttttt 113317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 373
Target Start/End: Original strand, 6414963 - 6415040
Alignment:
Q  295 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||| ||||||| ||||||||||||||| |||| ||| ||||||||||||| | || ||| |||| |||||||||||||    
T  6414963 tgtcgcggtgtcagacacgtgtcgtgtccgacatcga-atgacaccgacacatctaattaaactgtattatgtgatttt 6415040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 1704988 - 1705033
Alignment:
Q  330 gacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgatttttt 1705033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 12612073 - 12611984
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||| |||||| ||||| ||||||||| ||||||||| ||||| ||| || || ||||| | |  ||||||| ||||||||||||||||    
T  12612073 gattaagcatgttccggtatcggacacgcgtcgtgtctaacaccaacacgatactgacacatatgattacactcaattatgtgatttttt 12611984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 16164243 - 16164356
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||| |||| |||||  || |||||||| ||||| |||||||||||||||| | |||  ||||| ||| ||||  ||||| | || ||||| | ||    
T  16164243 cctatgaaacacatacactcttcggattaggcgtgtcctggtgtcggacacgtgttgcgtccaacaccaacacgacaatgacacatataattacattaaa 16164342  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  16164343 ttatgtgatttttt 16164356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 333
Target Start/End: Original strand, 43492431 - 43492504
Alignment:
Q  260 atcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||||||| |  ||  || |||||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  43492431 atcctatgaagcacatatgctcttcggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgaca 43492504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 5376483 - 5376539
Alignment:
Q  317 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||||| |||| ||||| ||||||||||||| || |||||||||||||||| |||||    
T  5376483 cgtgtccgacatcgacacgacaccgacacttttaattacactgaattatgttatttt 5376539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 16297223 - 16297287
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 329  Q
    ||||||||| |||||| ||| |||||||| ||||| ||||||||||||  |||||||| ||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgtcgtgtccgacacc 16297287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 22515888 - 22515928
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  22515888 gacaccgacacttgtaattacactaaattatgtgatttttt 22515928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 22881617 - 22881657
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  22881617 gacaccgacacttgtaattacactaaattatgtgatttttt 22881657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 328
Target Start/End: Complemental strand, 26830701 - 26830641
Alignment:
Q  268 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 328  Q
    |||||| |||||| ||| |||||||| ||||||||| ||| |||||||| |||||||||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacacgtgtagtgtctgacac 26830641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 38078662 - 38078702
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  38078662 gacaccgacacttgtaattacattgaattatgtgatttttt 38078702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 42359450 - 42359490
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  42359450 gacaccgacacttgtaattacactgaattttgtgatttttt 42359490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 9690212 - 9690267
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc 317  Q
    ||||||||||||| |||||   | |||||||| |||||||||||||||||||||||    
T  9690212 cctatgaagcacaaacactctccggattaggcgtgtcccggtgtcggacacgtgtc 9690267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 19330311 - 19330370
Alignment:
Q  207 gaatagaatatttgtcataattagttataatgatttt-cctgcaattatgttgtatccta 265  Q
    ||||| |||||| ||||||||||| |||||| ||||| |||| |||||||||||||||||    
T  19330311 gaataaaatattagtcataattaggtataattattttccctgtaattatgttgtatccta 19330370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 21378635 - 21378596
Alignment:
Q  336 acaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaatttttt 21378596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 27965940 - 27966011
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 334  Q
    ||||||||||  |||||| ||| |||||||| |||||||||||| | |||| | |||||||||||| |||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtcaggcacgaggcgtgtctgacacggacat 27966011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 35919270 - 35919317
Alignment:
Q  328 ccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||| ||||| ||||||| || ||||||||||||||||||||||||    
T  35919270 ccgacacgacacggacacttataattacactgaattatgtgatttttt 35919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 331
Target Start/End: Complemental strand, 40181984 - 40181922
Alignment:
Q  268 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccga 331  Q
    |||||||| |||| ||| |||||||| ||||||||||| |||||||||| ||||| ||||||||    
T  40181984 aagcacag-cactcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccga 40181922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 51410121 - 51410074
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||| |||| |||||||||| |||||||||||| ||||||||||    
T  51410121 gattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgaca 51410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 2218347 - 2218297
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 313  Q
    ||||||||||| |||||| |||||||||||| |||||  ||||||||||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacacg 2218297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 8117098 - 8117052
Alignment:
Q  329 cgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||| | ||||||| ||||||||||||||||| ||||||    
T  8117098 cgacatgacaccaatacttgtaattacactgaattatgtgttttttt 8117052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 16812675 - 16812629
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcgga 309  Q
    ||||||||||| |||||| |||||||||||| ||||||||| |||||    
T  16812675 ctatgaagcacggacactcctcagattaggcgtgtcccggtttcgga 16812629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 339 - 373
Target Start/End: Complemental strand, 31015097 - 31015063
Alignment:
Q  339 ccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||||||||||| ||||||||||||||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgatttt 31015063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 5927281 - 5927350
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||| |||||| ||||||||||||||||  || |||||||||  |||| |||| ||||| ||||    
T  5927281 tatgaagcacggacactcctcagattaggcatgtttcgatgtcggacatttgtcatgtccgacactgaca 5927350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Original strand, 9119028 - 9119097
Alignment:
Q  37 ttgagacttataggagaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaa 106  Q
    |||||||||  ||||||||||||||| || ||||||||| | |||||||| ||||| || || |||||||    
T  9119028 ttgagacttcgaggagaggaaagacctagtatgaaggaaatagctatggagttggatggtataaggttaa 9119097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 9161424 - 9161351
Alignment:
Q  37 ttgagacttataggagaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatgga 110  Q
    |||||||| | ||| || ||||| || ||||||||||||||||| ||||| ||||| || || |||||||||||    
T  9161424 ttgagactaagaggggatgaaaggcctagcatgaaggaagtggcaatggagttggatggtataaggttaatgga 9161351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 375
Target Start/End: Complemental strand, 18471355 - 18471318
Alignment:
Q  338 accgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgatttttt 18471318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 322
Target Start/End: Complemental strand, 6427631 - 6427595
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtc 322  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  6427631 gattaggcgtgtcccggtatcggacacgtgtcgtgtc 6427595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 9170247 - 9170171
Alignment:
Q  40 agacttataggagaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatggataagca 116  Q
    ||||||| ||| || ||||||||  | |||||||||||||| ||||| ||||| || || ||||||||||| |||||    
T  9170247 agacttagaggggatgaaagaccttgtatgaaggaagtggcaatggagttggatggcataaggttaatggagaagca 9170171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 9199814 - 9199738
Alignment:
Q  40 agacttataggagaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatggataagca 116  Q
    ||||||| ||| || |||||||| || |||| |||||| |||||||| ||||| || || ||||||||||| |||||    
T  9199814 agacttagaggtgatgaaagacctagtatgagggaagtagctatggagttggatggtataaggttaatggagaagca 9199738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 9218330 - 9218254
Alignment:
Q  40 agacttataggagaggaaagaccaagcatgaaggaagtggctatggaattggagggaatgaggttaatggataagca 116  Q
    ||||||| ||| || |||||||| || |||| |||||| |||||||| ||||| || || ||||||||||| |||||    
T  9218330 agacttagaggtgatgaaagacctagtatgagggaagtagctatggagttggatggcataaggttaatggagaagca 9218254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 367
Target Start/End: Original strand, 19058857 - 19058889
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgt 367  Q
    |||||||||||||||| ||||||||||||||||    
T  19058857 gacaccgacacttgtaattacactgaattatgt 19058889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 21621013 - 21620973
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||| ||||||  |||||||||||||||||||||||    
T  21621013 gacaccgacgcttgtaaatacactgaattatgtgatttttt 21620973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 28663666 - 28663626
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| |||||  |||||||||||||||||    
T  28663666 gacaccgacacttgtaattacatagaattatgtgatttttt 28663626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 31672896 - 31672936
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||| ||||||| ||||||||||||| ||||||||||    
T  31672896 gacaccgagacttgtaattacactgaattaagtgatttttt 31672936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 33203020 - 33202956
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 329  Q
    |||||||||| | ||| ||| |||||||| |||| |||||||||| | || ||||||||||||||    
T  33203020 atgaagcacatatactcctcggattaggcgtgtcacggtgtcggatatgtatcgtgtctgacacc 33202956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 34741966 - 34741899
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg-tgtcgtgtctgacacc 329  Q
    |||||||||||| ||||||  || |||||||| |||||| |||||||||||| ||||||||| ||||||    
T  34741966 cctatgaagcacggacactcttcggattaggcgtgtccc-gtgtcggacacgttgtcgtgtcagacacc 34741899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 262
Target Start/End: Complemental strand, 40525022 - 40524962
Alignment:
Q  203 gatagaatagaatattt-gtcataattagttataatgattttcctgcaattatgttgtatc 262  Q
    ||||||||||||||||| |||||||||   |||||| ||||||||  ||||||||||||||    
T  40525022 gatagaatagaatattttgtcataattgactataattattttcctataattatgttgtatc 40524962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 46348384 - 46348424
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||| |||||| |||||||||    
T  46348384 gacaccgacacttgtaattacactaaattatatgatttttt 46348424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 24339772 - 24339660
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| | |||| ||| |||||||| ||||||||||||||| |||||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 24339673  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  24339672 tatgtgatttttt 24339660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 5409770 - 5409877
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||      |||||| |||||||||||||||| || |||||||    
T  5409770 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgt------ccgacacgacaccgacacttgtaattgcactgaa 5409863  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  5409864 ttatgtgatttttt 5409877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 265 - 375
Target Start/End: Original strand, 26033392 - 26033502
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||| ||| |||||| ||| |||||||  |||| |||| ||||||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||    
T  26033392 atgaaacacggacactcctcggattaggtgtgtcgcggtatcggacacgtgtcatgtctgacaccgacacgagaccgacacttgtaattacactgaatta 26033491  T
Q  365 tgtgatttttt 375  Q
    |||||||||||    
T  26033492 tgtgatttttt 26033502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 7438837 - 7438724
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||   ||||||| |||||  |||||| ||| ||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  7438837 cctatgaagcacggacactccttgaattaggcgtgtcctagtgtcgcacatgtgtcgtgtttgacaccgacatgacaccgacacttgtaattacattgaa 7438738  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  7438737 ttatgtgatttttt 7438724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 43027404 - 43027510
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| ||||||  || |||||||| ||||||||||||||||||||||||||||||||||      |||||||||||||||| |||||||| ||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacac------gacaccgacacttgtatttacactgcat 43027497  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  43027498 tatgtgatttttt 43027510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 598327 - 598257
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 598257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 25822785 - 25822675
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||| ||| |||||| || ||||||||||||||||| |||| ||||||||||||||| || ||||| | |||||||||||||||| |||||||||||    
T  25822785 ctatgaaacacggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaat 25822686  T
Q  363 tatgtgatttttt 375  Q
      |||||||||||    
T  25822685 --tgtgatttttt 25822675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 9778625 - 9778518
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||  |||||||| |||||||||||||||||||||| ||||      |||||| |||||||||||||||| ||| ||||||    
T  9778625 cctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgt------ccgacacgacaccgacacttgtaattatactgaa 9778532  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  9778531 ttatgtgatttttt 9778518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 300 - 375
Target Start/End: Original strand, 11665406 - 11665481
Alignment:
Q  300 cggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||| || ||| ||||||||||||||||||||    
T  11665406 cggtgtcggacacgtgtcgtgttcgacaccgacatgacatcgacacttataattagactgaattatgtgatttttt 11665481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 32093954 - 32094061
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtccc-ggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||  ||||| ||| |||||||| |||||| |||||||||||||||||||||| |||||      |||||||||| ||||| ||||||||||    
T  32093954 ctatgaagcacgaacactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacac------gacaccgacatttgtaattacactgaa 32094047  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  32094048 ttatgtgatttttt 32094061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 2334379 - 2334268
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||| ||| |||||| ||| |||||| | |||  | |||||||||| |||||||||| ||||| |||| |||||||||||||||| ||||||| |||    
T  2334379 ctatgaaacacggacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacac-gacacgacaccgacacttgtaattacactaaat 2334281  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  2334280 tatgtgatttttt 2334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 283 - 375
Target Start/End: Complemental strand, 21560613 - 21560521
Alignment:
Q  283 tcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||| |||  ||||||  |||| || |||||| ||||||||| | |||||||||||||||| ||||||||||||||||||||||||    
T  21560613 tcagattaggcgtgtttcggtgttagacatgtatcgtgtttgacaccgatacgacaccgacacttgtaattacactgaattatgtgatttttt 21560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 21880271 - 21880201
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||||||| |||||||| ||||| ||||||||||| |||||||||| ||||||||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgaca 21880201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 9408316 - 9408375
Alignment:
Q  316 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| | |||||||||||||||| ||||||| ||||||||||||||||    
T  9408316 tcgtgtctgacaccgatacgacaccgacacttgtaattacactaaattatgtgatttttt 9408375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 325 - 375
Target Start/End: Complemental strand, 18039067 - 18039017
Alignment:
Q  325 acaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  18039067 acaccgacacgacaccgacacttgtaattacactgaattatgtgatttttt 18039017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 21864927 - 21864857
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||||||||| |||  ||||| | |||||||||||||||||||||||||||| |||| |||||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgaca 21864857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 260 - 333
Target Start/End: Complemental strand, 15680931 - 15680858
Alignment:
Q  260 atcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||||| |||||| |||  ||||| | |||| ||||||||||||||||||||||| ||||||||||    
T  15680931 atcctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 15680858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 375
Target Start/End: Complemental strand, 13770810 - 13770709
Alignment:
Q  268 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgt 367  Q
    |||||| ||||||  || |||||||| ||| |||||||||||||||||| ||||| |||||      |||| ||||||||||| ||||||||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacac------gacaacgacacttgtaattacactgaattatgt 13770717  T
Q  368 gatttttt 375  Q
     |||||||    
T  13770716 aatttttt 13770709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 367
Target Start/End: Complemental strand, 4795018 - 4794915
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    ||||||||||||||||||||  |||||| | |||   |||||| || |||||||||||| |||||||| | |  |||||||||| || ||||||||||||    
T  4795018 tatgaagcacagacacttcttggattagacgtgtttaggtgtcagatacgtgtcgtgtccgacaccgatacggtaccgacacttataattacactgaatt 4794919  T
Q  364 atgt 367  Q
    ||||    
T  4794918 atgt 4794915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 373
Target Start/End: Original strand, 26329354 - 26329421
Alignment:
Q  306 cggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||||||||||||||||||||||||||| ||| ||||||| | || |||||||||||| |||| ||||    
T  26329354 cggacacgtgtcgtgtctgacaccgacacgacgccgacacatataattacactgaattgtgtgttttt 26329421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 21568561 - 21568611
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 313  Q
    |||||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  21568561 ctatgaagcacagacactcctcagattaagcatgtcccggtgtccgacacg 21568611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 373
Target Start/End: Original strand, 27229264 - 27229350
Alignment:
Q  287 attaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||| |||||  |||||| |||||| ||||||||||||  |||| |||||||| |||| || ||||||| ||||||||||||||    
T  27229264 attaggcgtgtcctagtgtcgaacacgtatcgtgtctgacagtgacacgacaccgatacttataattacactaaattatgtgatttt 27229350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 32308218 - 32308140
Alignment:
Q  295 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||| |||||||||||| ||||||||||  ||||||||| ||||| ||||| |  | ||||||||||||||||||||||    
T  32308218 tgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgatttt 32308140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 11272569 - 11272629
Alignment:
Q  317 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaat--tatgtgatttttt 375  Q
    |||||| |||||||||| |||||||||||||||| |||||||||||  |||||||||||||    
T  11272569 cgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatatgtgatttttt 11272629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 22484143 - 22484074
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||| |||||||||| ||| || |||||| || ||||||||| ||||| |||||||||||||||    
T  22484143 tatgaagcacggacacttctcggatcagacatgtctcgatgtcggacatgtgtcatgtctgacaccgaca 22484074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 32287404 - 32287473
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||| |||||| ||| |||||||  |||||||||||||||||| |||| |||| ||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacttgtcatgtccgacaccgaca 32287473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 13300479 - 13300428
Alignment:
Q  324 gacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||||||| ||| ||| |||||||||||||| |||||||||    
T  13300479 gacaccgacatgacaccgagactggtaattacactgaattatatgatttttt 13300428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 369
Target Start/End: Original strand, 6630849 - 6630947
Alignment:
Q  271 cacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtga 369  Q
    |||| ||||| |||||||||||  ||||  |||||||| ||||||| ||||| |||||| ||| |||| |||||| | || ||||||||||||| ||||    
T  6630849 cacacacactcctcagattaggtgtgtcttggtgtcgggcacgtgttgtgtccgacaccaacacgacatcgacacatataattacactgaattaagtga 6630947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 321
Target Start/End: Original strand, 29763129 - 29763187
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgt 321  Q
    ||||||||||| |||||| ||| |||||||| ||||| | |||||||||||||||||||    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgt 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 340
Target Start/End: Original strand, 38804489 - 38804567
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacatgacacc 340  Q
    |||||||||||| ||||| ||| ||||||||||||||||| |||||||||  ||| ||||| |||||| ||| ||||||    
T  38804489 ctatgaagcacatacactcctcggattaggcatgtcccggcgtcggacacacgtcggtgtccgacaccaacacgacacc 38804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 40287306 - 40287356
Alignment:
Q  267 gaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc 317  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||| |||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggacatgtgtc 40287356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 3991382 - 3991342
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  3991382 gacaccgacacttgtaattatactgaattatgtgatttttt 3991342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 367
Target Start/End: Complemental strand, 6028735 - 6028651
Alignment:
Q  283 tcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgt 367  Q
    ||||||||||| |||| | |||||| || ||||||||||  ||||| |||| |||||||||| ||||| ||||| | ||||||||    
T  6028735 tcagattaggcgtgtctcagtgtcgaactcgtgtcgtgttcgacactgacacgacaccgacatttgtaattacattaaattatgt 6028651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 19213861 - 19213821
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  19213861 gacaccgacacttgtatttacactgcattatgtgatttttt 19213821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 25481960 - 25481920
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  25481960 gacaccaacacttgtaattacactgaattatgtgatttttt 25481920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 7133212 - 7133283
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgaca 333  Q
    ||||||||||| ||| || |||||||||||  |||||| |||||||||||| ||| ||||| ||||||||||    
T  7133212 ctatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacacgcgtcggtgtccgacaccgaca 7133283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 15902933 - 15902842
Alignment:
Q  282 ctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||| |||| || ||||| ||| |||| || |||||||||| || |||||||  |||||||||| | || ||||||| ||||||||||||||    
T  15902933 ctcaaattaagcgtgtcctggtctcgggcatgtgtcgtgtccgataccgacacaacaccgacacatataattacactaaattatgtgatttt 15902842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 313
Target Start/End: Original strand, 18215144 - 18215187
Alignment:
Q  270 gcacagacacttctcagattaggcatgtcccggtgtcggacacg 313  Q
    |||| |||||| |||||||||||| |||||||||||||||||||    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacacg 18215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 330 - 373
Target Start/End: Complemental strand, 27945104 - 27945061
Alignment:
Q  330 gacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||| |||||||||||||||| |||||||||||||||| |||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaatttt 27945061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 33994308 - 33994261
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||| |||| |||||| ||||| |||||||||||||||||||||    
T  33994308 gattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgaca 33994261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 1401143 - 1401076
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccga 331  Q
    |||||||||||  |||||| |||||||||||  ||||||| |||||||||  ||||||||| ||||||||    
T  1401143 cctatgaagcatggacactcctcagattaggtgtgtcccgatgtcggaca--tgtcgtgtcggacaccga 1401076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 5835366 - 5835296
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||| ||||| | ||||||||| ||||| || ||||||||| || ||||| |||| |||||||||||||||    
T  5835366 ctataaagcaaaaacacttctcggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgaca 5835296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 322
Target Start/End: Complemental strand, 17852126 - 17852060
Alignment:
Q  256 ttgtatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 322  Q
    |||||| ||||||||||| |||||| |||  ||||||  |||| |||||||||||||||||| ||||    
T  17852126 ttgtatactatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacacgtgtcatgtc 17852060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 18212973 - 18213043
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||||||||| ||| ||| |||| |||||| ||||| || | | |||||||| ||||||||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgaca 18213043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 24105797 - 24105727
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||| ||||| ||| | |||||| |||||||||||||||||| ||| ||| | ||| ||||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgaca 24105727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 38134335 - 38134445
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||| ||||| ||| |||||||| ||||||| ||||| | || | ||| |||  ||||| |||||| |||||||| | |  ||||| |||||    
T  38134335 ctatgaagcacatacactcctcggattaggcgtgtcccgatgtcgaatacttatcgagtccaacacccacatgagaccgacacatatgattacattgaat 38134434  T
Q  363 tatgtgatttt 373  Q
    ||||| |||||    
T  38134435 tatgtcatttt 38134445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 313
Target Start/End: Original strand, 40131939 - 40131989
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 313  Q
    |||||||||||||||||| ||| |||||| | |||||| ||||||||||||    
T  40131939 ctatgaagcacagacactcctcggattagacgtgtccctgtgtcggacacg 40131989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 1433578 - 1433513
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 328  Q
    ||||||||||| |||||| ||| |||||| | ||||| |||||||||||| |||| |||| |||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacac 1433513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 1885648 - 1885591
Alignment:
Q  318 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||| |||||| ||| |||||||||||||||  ||||| |||||||||| |||||||    
T  1885648 gtgtccgacaccaacacgacaccgacacttgtgattacattgaattatgtcatttttt 1885591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 6490835 - 6490786
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 312  Q
    ||||||||||| |||||| ||| ||||| || ||||||||||||||||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 11061076 - 11061117
Alignment:
Q  334 tgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||    
T  11061076 tgacaccgacacttgtaattatactaaattatgtgatttttt 11061117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 18215182 - 18215227
Alignment:
Q  330 gacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||| ||||||||||||||||  ||||||| |||||||||||||||    
T  18215182 gacacgacaccgacacttgtaactacactgcattatgtgatttttt 18215227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 367
Target Start/End: Original strand, 22801697 - 22801774
Alignment:
Q  290 aggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgt 367  Q
    |||| |||||| ||||| |||| |||| ||||| ||||| ||||  ||||||||||||||  ||||| ||||||||||    
T  22801697 aggcgtgtcccagtgtccgacaagtgtggtgtcagacactgacaatacaccgacacttgtgattacagtgaattatgt 22801774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 312
Target Start/End: Complemental strand, 35750010 - 35749957
Alignment:
Q  259 tatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 312  Q
    |||||||||||||||||||||| ||| || ||||  ||||||||| ||||||||    
T  35750010 tatcctatgaagcacagacactcctccgactaggtgtgtcccggtttcggacac 35749957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Complemental strand, 48438605 - 48438564
Alignment:
Q  334 tgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||| |||| ||||| ||||||||||||||||||    
T  48438605 tgacaccgacacgtgtaattacattgaattatgtgatttttt 48438564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 330
Target Start/End: Complemental strand, 8234242 - 8234198
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccg 330  Q
    |||||||| |||| |||||||||||| |||||||||| |||||||    
T  8234242 gattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccg 8234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 343 - 375
Target Start/End: Original strand, 13557750 - 13557782
Alignment:
Q  343 cacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||| ||||||||||||||||||||||||    
T  13557750 cacttgtaattacactgaattatgtgatttttt 13557782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 14729822 - 14729770
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtg 315  Q
    |||||||| || |||||| ||| ||||| || |||||||||||||||||||||    
T  14729822 ctatgaagtacggacactcctcggattaagcgtgtcccggtgtcggacacgtg 14729770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 373
Target Start/End: Complemental strand, 19206162 - 19206070
Alignment:
Q  281 tctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||||||| | | | |||||||| || | ||||| | ||||||||| ||| ||||||||||| | || ||| | ||||||||||||||||    
T  19206162 tctcagattagccgtattccggtgtcagatatgtgtcatctctgacaccaacaagacaccgacacatataattataatgaattatgtgatttt 19206070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 22602705 - 22602749
Alignment:
Q  329 cgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||| ||||||||||| | || ||||||||||||||||||||||    
T  22602705 cgacacgacaccgacacatataattacactgaattatgtgatttt 22602749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 16766827 - 16766715
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||| |  || |||||||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| |||||||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 16766728  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  16766727 tatgtgatttttt 16766715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 8365447 - 8365560
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| || ||| ||| |||||||| |||||| ||||||||||||||||||||| || ||||||| |||||||||||||||| |||||| |||    
T  8365447 cctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaa 8365546  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||| ||||    
T  8365547 ttatgtgatatttt 8365560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 8714110 - 8713998
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||| ||||||| ||| |||| ||| ||||||| ||||||| | |||||||||| |||||||||| |||||| ||| ||||| |||||||||||    
T  8714110 ctatgaagcaaagacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaat 8714011  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  8714010 tatgtgatttttt 8713998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 9107299 - 9107411
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| | |||| ||| |||||||  ||||||||||||||||||  || ||||| |||||||||| |||||||||||||||| |||||||||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 9107398  T
Q  363 tatgtgatttttt 375  Q
    | |||||||||||    
T  9107399 tttgtgatttttt 9107411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 10770607 - 10770715
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac--gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactga 360  Q
    ||||||||||| |||||| |||||||||||||||||||||  ||||||||  ||||||||||||||||      |||||||||||||||| |||||||||    
T  10770607 ctatgaagcacggacactcctcagattaggcatgtcccggcatcggacacgtgtgtcgtgtctgacac------gacaccgacacttgtaattacactga 10770700  T
Q  361 attatgtgatttttt 375  Q
    |||||||||||||||    
T  10770701 attatgtgatttttt 10770715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 9522998 - 9522909
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||| |||| |||||||||||||||||||  || ||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  9522998 gattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgatttttt 9522909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 5970037 - 5970149
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||| || |||| ||| |||| ||| ||||||| ||||||| | |||||||||| |||||||||| |||||| ||| ||||| |||||||||||    
T  5970037 ctatgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaat 5970136  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  5970137 tatgtgatttttt 5970149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 31385048 - 31384938
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||| |||||| ||  |||||||| ||||||||||| ||||||||||||||||  ||| | ||| ||||| |||||||||| ||||||||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaaca-ctacacgacactgacacttgtaattacactgaatt 31384950  T
Q  364 atgtgatttttt 375  Q
    ||||||||||||    
T  31384949 atgtgatttttt 31384938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 262 - 373
Target Start/End: Original strand, 10339053 - 10339165
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagtt-acactga 360  Q
    |||||||||||| |||||| ||| |||||||| |||||| |||||||||| |||||||||| |||||||||| | ||| ||||| | || || |||||||    
T  10339053 cctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactga 10339152  T
Q  361 attatgtgatttt 373  Q
    |||||||||||||    
T  10339153 attatgtgatttt 10339165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 17435329 - 17435217
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||| || ||||||| ||||||||| | |||||| |||||| |||||||||||||| |||| |||||  ||||  ||||||||| |||||||||||    
T  17435329 ctatgaagtacggacacttttcagattagacgtgtcccagtgtcgaacacgtgtcgtgtccgacatcgacaaaacactaacacttgtaattacactgaat 17435230  T
Q  363 tatgtgatttttt 375  Q
    ||||| |||||||    
T  17435229 tatgtaatttttt 17435217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 373
Target Start/End: Complemental strand, 18367967 - 18367856
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||  ||| |||| |||||| ||||| |||| ||||||||||||||||||||| ||||||||||| | || |||||||| |    
T  18367967 cctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgca 18367868  T
Q  362 ttatgtgatttt 373  Q
    || |||||||||    
T  18367867 ttttgtgatttt 18367856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 267 - 345
Target Start/End: Original strand, 23130405 - 23130483
Alignment:
Q  267 gaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacac 345  Q
    |||||||| ||||| |||||||||||||||||||| | || |||||||||||||||||||||| ||||||||| |||||    
T  23130405 gaagcacatacactcctcagattaggcatgtcccgatatcagacacgtgtcgtgtctgacaccaacatgacactgacac 23130483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 25038000 - 25038110
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||| ||||||||||| | | || ||| | |||||||||||||||||||||| |||||| |||  | ||||||| ||||| ||||||| |||    
T  25038000 ctatgaagcacatacacttctcaggtcatgcgtgttctggtgtcggacacgtgtcgtgtcggacaccaacacaataccgacatttgtaattacactaaat 25038099  T
Q  363 tatgtgatttt 373  Q
    ||||| |||||    
T  25038100 tatgtaatttt 25038110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 28152217 - 28152147
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||  ||||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgaca 28152147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 262 - 373
Target Start/End: Original strand, 17327589 - 17327694
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||| |||||||| |||||| ||||| ||||||||||||||      |||||| ||||| ||||| | |||||||||| ||    
T  17327589 cctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgt------ccgacacgacactgacacatatagttacactaaa 17327682  T
Q  362 ttatgtgatttt 373  Q
    ||||||||||||    
T  17327683 ttatgtgatttt 17327694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 3209518 - 3209400
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccg------acacttgtagttaca 356  Q
    |||||||||||| ||||| ||| |||||||| ||||| |||||||||| ||||||||||  ||||| |||| |||||||      ||||||||| | |||    
T  3209518 ctatgaagcacaaacactcctcggattaggcgtgtccgggtgtcggacgcgtgtcgtgttcgacactgacacgacaccgacaccgacacttgtaataaca 3209419  T
Q  357 ctgaattatgtgatttttt 375  Q
    || ||||||||||||||||    
T  3209418 ctaaattatgtgatttttt 3209400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 375
Target Start/End: Complemental strand, 12696446 - 12696342
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    |||||||||||||||| ||  ||| |||  |||||||||||| ||||||||||||||| |||||      ||||| |||||||||| |||||||||||||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacac------gacactgacacttgtaattacactgaatta 12696353  T
Q  365 tgtgatttttt 375  Q
    ||| |||||||    
T  12696352 tgtaatttttt 12696342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 28715415 - 28715344
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||||  |||||||||  ||||||| ||||||||||||| |||||||||||||| ||||||||||    
T  28715415 cctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgaca 28715344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 7378098 - 7378028
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| ||||||||||||||||| | |||||||||||||||  | ||||||||| ||||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtcggatgcatgtcgtgtccgacaccgaca 7378028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 24645600 - 24645530
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||||||||||  || |||||| | ||||  |||||||||||||||||||||||||||||||||    
T  24645600 ctatgaagcacagacactcttcggattagacgtgtcttggtgtcggacacgtgtcgtgtctgacaccgaca 24645530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 34595253 - 34595183
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||| ||| |||||||  |||||||||||| ||||||||||||||| ||||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgaca 34595183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 263 - 372
Target Start/End: Complemental strand, 7248488 - 7248379
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| |||| | | |||||||||||||||||| ||| |||||  ||||||||| ||| || |||| | || |||| ||||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatgttgtgtccaacaccgacacgactccaacacatataattaccctgaat 7248389  T
Q  363 tatgtgattt 372  Q
    ||||||||||    
T  7248388 tatgtgattt 7248379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 262 - 371
Target Start/End: Complemental strand, 10294238 - 10294129
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    ||||||||||||||||||| ||||||||||   |||||  || |||||||| ||||||||| |||||| ||| ||||||||||| | || ||||| ||||    
T  10294238 cctatgaagcacagacactcctcagattagctgtgtcctagtttcggacacatgtcgtgtccgacaccaacacgacaccgacacatataattacattgaa 10294139  T
Q  362 ttatgtgatt 371  Q
     |||| ||||    
T  10294138 atatgcgatt 10294129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 373
Target Start/End: Complemental strand, 26562806 - 26562709
Alignment:
Q  276 acacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||||||||||||||| |||||| |  | ||||||| ||| |||||  |||||||||| |||| |||||| | || ||||||||||||||||||||||    
T  26562806 acacttctcagattagccatgtctctatatcggacatgtgccgtgttcgacaccgacacgacatcgacacatataattacactgaattatgtgatttt 26562709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 16488546 - 16488629
Alignment:
Q  290 aggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||| |||||| ||| | ||||||||||||||| |||||||||| ||||||||||| | || |||||||| ||| |||||||||    
T  16488546 aggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgatttt 16488629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 8776907 - 8777014
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||| |||||||  |||| ||||||||||||||||||||||| |   ||     |||||| ||||||||| ||||||||||    
T  8776907 cctatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtc-gtgtcc-----gacaccaacacttgtaattacactgaa 8777000  T
Q  362 ttatgtgatttttt 375  Q
    || |||||||||||    
T  8777001 ttttgtgatttttt 8777014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 17302664 - 17302575
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||  ||| ||| |||||||||||||| |||||| | || |||| ||||  |||||||||| ||||| ||||||||||||||||||    
T  17302664 gattaggtgtgttccgatgtcggacacgtgttgtgtctaatactgacacgacaatgacacttgtaattacattgaattatgtgatttttt 17302575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 403865 - 403905
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  403865 gacaccgacacttgtagttacactaaattatgtgatttttt 403905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 373
Target Start/End: Original strand, 5000557 - 5000665
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    |||||||||  |||||  || |||||| | ||||| ||||||||| | ||||||||||||||||||||||||||| ||||  |  | ||| ||||||| |    
T  5000557 atgaagcacgaacactcttcggattagacgtgtcctggtgtcggatatgtgtcgtgtctgacaccgacatgacactgacatataaaattatactgaatca 5000656  T
Q  365 tgtgatttt 373  Q
    |||||||||    
T  5000657 tgtgatttt 5000665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 34595192 - 34595152
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  34595192 gacaccgacacttgtaattacactgaattatgtgatttttt 34595152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 4878062 - 4877992
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||| |||||| ||| |||||||| ||| || |||||||||| |||||||||| ||||||||||    
T  4878062 cctatgaagcacggacactcctcggattaggcgtgt-cctgtgtcggacatgtgtcgtgtccgacaccgaca 4877992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 313
Target Start/End: Original strand, 9025448 - 9025495
Alignment:
Q  266 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 313  Q
    |||||||| |||||||||| |||||||| |||||||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacg 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 16833428 - 16833357
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||| ||||||||| ||| |||| ||  ||||| |||||||||| |||||||||||| |||||||||    
T  16833428 cctatgaagtacagacactcctcggattcggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgaca 16833357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 32839571 - 32839654
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccgg-tgtcggacacgtgtcgtgtctgacaccgacatgacaccgacac 345  Q
    |||||||||||||||||||||| |||||||| |||||||| |||  ||||| |||| |||| |||||  |||||||||| ||||    
T  32839571 ctatgaagcacagacacttctcggattaggcgtgtcccggttgttagacacatgtcttgtccgacactaacatgacaccaacac 32839654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 32978842 - 32978909
Alignment:
Q  266 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||| |||||| ||  |||||| | ||||||||||||||||| |||||||||| ||||||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 32978909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 9911524 - 9911566
Alignment:
Q  330 gacatgacaccgacacttgtagttacactgaattatgtgattt 372  Q
    |||| |||||||||||||||| |||||||||||||||||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 17841530 - 17841596
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccg 330  Q
    |||||||||| |||||| ||| |||||||| |||| | ||||||||||| ||||||||| |||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccg 17841596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 34073278 - 34073386
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| |||  |||||   |||||||||||||| ||| ||||||||  |||||||||| ||||||||| | | || |||||||||||    
T  34073278 ctatgaagcacggacactcctcgaattagaggtgtcccggtgtcgg-cacatgtcgtgta-gacaccgacacgacaccgacccatataattacactgaat 34073375  T
Q  363 tatgtgatttt 373  Q
    |||| ||||||    
T  34073376 tatgagatttt 34073386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 6665331 - 6665282
Alignment:
Q  264 tatgaagcaca-gacacttctcagattaggcatgtcccggtgtcggacac 312  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||||||    
T  6665331 tatgaagcacaagacacttctcggattaggcatgtccccgtgtcggacac 6665282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 7801157 - 7801197
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  7801157 gacaccgacacttgtaattacgctgaattatgtgatttttt 7801197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 7977831 - 7977871
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  7977831 gacaccgacacttgtaattacactgaattatgtaatttttt 7977871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 373
Target Start/End: Complemental strand, 9629513 - 9629403
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat-gacaccgacacttgtagttacactgaa 361  Q
    ||||||||||  |||||| ||| |||||| | |||| | ||||||||||| ||| ||||| ||||| ||||  ||||||||||| | || ||||| ||||    
T  9629513 ctatgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacac-gacaccgacaccgacacatataattacattgaa 9629415  T
Q  362 ttatgtgatttt 373  Q
    ||||||||||||    
T  9629414 ttatgtgatttt 9629403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 16833365 - 16833326
Alignment:
Q  336 acaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgatttttt 16833326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 339
Target Start/End: Original strand, 8389411 - 8389484
Alignment:
Q  266 tgaagcacagacacttctcagattaggcatgtcccggtgtcggaca-cgtgtcgtgtctgacaccgacatgacac 339  Q
    |||||||| |||||| ||| |||||||  ||||||||||||||||| ||||| | ||| ||||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacaccgtgttg-gtccgacaccgacatgacac 8389484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 373
Target Start/End: Original strand, 9195727 - 9195793
Alignment:
Q  307 ggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||||| ||||||||| |||||| ||| ||||||||||| | || ||||||| |||||||| |||||    
T  9195727 ggacacatgtcgtgtcagacacctacacgacaccgacacatataattacactaaattatgtcatttt 9195793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 333
Target Start/End: Complemental strand, 9658974 - 9658928
Alignment:
Q  287 attaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||| ||| |||||||| |||||||||||||||| |||||||||    
T  9658974 attaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgaca 9658928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 31959268 - 31959214
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg 318  Q
    |||||||||| |||||| ||| |||||||  |||||||||||||||||| |||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcg 31959214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 21395292 - 21395341
Alignment:
Q  318 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgt 367  Q
    ||||| ||||| |||| |||||||||||||||| ||||||| ||||||||    
T  21395292 gtgtccgacactgacacgacaccgacacttgtaattacactaaattatgt 21395341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 26178620 - 26178661
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtc 306  Q
    |||||||||||||||| ||| |||||||| ||||||||||||    
T  26178620 atgaagcacagacactcctccgattaggcgtgtcccggtgtc 26178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 27904036 - 27904077
Alignment:
Q  334 tgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||    
T  27904036 tgacaccgacatttgtaattacactgaattatgtgttttttt 27904077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 426515 - 426555
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||| | ||||||||||||||||    
T  426515 gacaccgacacttgtaattacatttaattatgtgatttttt 426555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 853860 - 853900
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| || |||| ||||||||||||||||    
T  853860 gacaccgacacttgtaattgcacttaattatgtgatttttt 853900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 1700410 - 1700370
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||| || |||||||||| |||||||||||||    
T  1700410 gacaccgacacttataattacactgaaatatgtgatttttt 1700370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 7027300 - 7027260
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||| | || ||||||||||||||||||||||||    
T  7027300 gacaccgacacatataattacactgaattatgtgatttttt 7027260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 7265535 - 7265603
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||| ||| || ||| |||||||||| | ||||||||||||| || | ||||| ||||||||||    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgaca 7265603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 26402681 - 26402721
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||  |||||||||||||||| |||||||    
T  26402681 gacaccgacacttgtgattacactgaattatgtcatttttt 26402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 31429004 - 31429044
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||| ||| ||||| ||||||||||||||||||||||||    
T  31429004 gacacctacatttgtaattacactgaattatgtgatttttt 31429044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 375
Target Start/End: Complemental strand, 31959213 - 31959177
Alignment:
Q  339 ccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||| |||||||| |||||||||||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgatttttt 31959177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 32978900 - 32978940
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||| ||||||||| ||||||    
T  32978900 gacaccgacacttgtaattacacttaattatgtgttttttt 32978940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 33818087 - 33818023
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgaca 327  Q
    ||||||| |||||||||| ||||||||||||||||| | ||||  |||||| | |||||| ||||    
T  33818087 ctatgaatcacagacactcctcagattaggcatgtctcagtgttagacacgcgacgtgtccgaca 33818023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 11223793 - 11223904
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| |||||||||||| |||||||||||| |||| |||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaat 11223891  T
Q  363 tatgtgatttttt 375  Q
    ||||| |||||||    
T  11223892 tatgttatttttt 11223904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 37419874 - 37419761
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||| |||||||| |||||||||||||||||||  ||||||| |||||||||| ||||||| |||||||| ||||||||||    
T  37419874 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaa 37419775  T
Q  362 ttatgtgatttttt 375  Q
    || |||||||||||    
T  37419774 ttttgtgatttttt 37419761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 263 - 357
Target Start/End: Complemental strand, 26769641 - 26769547
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacac 357  Q
    ||||||||||| |||||| ||| |||||||| |||||| ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacac 26769547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 30717459 - 30717571
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||  |||||||| | |||| |||||| |||||||||||||| |||| ||||| |||| ||||||||||| |||||||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 30717558  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  30717559 tatgtgatttttt 30717571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 263 - 365
Target Start/End: Complemental strand, 35056998 - 35056896
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| |||||||||||| |||  | ||||||||||||||||||||| |||||||||| ||||||||||| | || |||||||||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaat 35056899  T
Q  363 tat 365  Q
    |||    
T  35056898 tat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 265 - 374
Target Start/End: Complemental strand, 15657992 - 15657883
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||||||  |||||| ||| || ||||| |||||||| ||||||||||||||| ||| |||| | ||| |||||||||| ||||| |||||||||||||    
T  15657992 atgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaatta 15657893  T
Q  365 tgtgattttt 374  Q
    ||||||||||    
T  15657892 tgtgattttt 15657883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 370
Target Start/End: Original strand, 27286222 - 27286328
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||||||||||  | |||||||  |||||||||||||||||| |||||||||| |||| ||||||||||  ||||| | || ||||||| ||||    
T  27286222 tatgaagcacagacactctttagattagatatgtcccggtgtcggacatgtgtcgtgtccgacatcgacatgacattgacacctataattacacttaatt 27286321  T
Q  364 atgtgat 370  Q
    |||||||    
T  27286322 atgtgat 27286328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 34784911 - 34785021
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||||||||| |||  || |||| |||||| ||||| |||| |||||||||| || ||||||| ||||||||||| | || ||||||| |||    
T  34784911 ctatgaagcacagacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaat 34785010  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  34785011 tatgtgatttt 34785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 347
Target Start/End: Complemental strand, 27084388 - 27084304
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacactt 347  Q
    |||||||||| ||||||| ||| |||||||| |||| |||||| |||||||||||||||| ||||||||||||| | ||||||||    
T  27084388 ctatgaagcagagacactcctccgattaggcgtgtctcggtgttggacacgtgtcgtgtccgacaccgacatgaaatcgacactt 27084304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 18840953 - 18841023
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||| ||| |||||||  ||||||||||||||||| |||||||||||||||||||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgaca 18841023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 30404790 - 30404891
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||| || ||||||||||||||||||||| ||||||||||| |||||||||| ||| ||||           |||||||| |||||||||||    
T  30404790 ctatgaagcacaaacgcttctcagattaggcatgtcctggtgtcggacatgtgtcgtgtccgacgccga-----------cacttgtaattacactgaat 30404878  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  30404879 tatgtgatttttt 30404891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 373
Target Start/End: Complemental strand, 44860449 - 44860340
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||| |||||| |||  ||||||  ||||||| |||||||||| |||||||||  ||||| ||| ||||||||||| | || ||||||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatgtcgtgtccaacaccaacacgacaccgacacatataattacactgaatt 44860350  T
Q  364 atgtgatttt 373  Q
    ||| ||||||    
T  44860349 atgcgatttt 44860340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 375
Target Start/End: Original strand, 2438661 - 2438760
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||||||| |||||| ||| |||||||| ||||||||||||||||| |||||||||| ||||           |||||||||||| |||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgaca-----------ccgacacttgtaattacactgaatta 2438749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 372
Target Start/End: Original strand, 36756275 - 36756382
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    |||||||||||||||| ||  |||||||| |||  |||||||||||| |||| ||||  |||||  ||| ||||||||||||| || |||||||||||||    
T  36756275 atgaagcacagacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaatta 36756374  T
Q  365 tgtgattt 372  Q
    ||| ||||    
T  36756375 tgttattt 36756382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 24975255 - 24975356
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||||||||||   |||||| ||||||||||| ||| ||||||||||| |||| ||||||||| | | || |||||||||||    
T  24975255 ctatgaagcacggacactcctcagattagatttgtcccagtgtcggacacatgt-gtgtctgacacggacacgacaccgacgcatatatttacactgaat 24975353  T
Q  363 tat 365  Q
    |||    
T  24975354 tat 24975356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 32749754 - 32749864
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||| | |||||| || |||| |||| |||||| ||||||||||| ||||  ||| |||| ||||| ||||| ||||||| |  |||||||||||    
T  32749754 ctatgaagcgcggacactccttagataaggcgtgtcccagtgtcggacacatgtcacgtccgacatcgacacgacactgacacttattattacactgaat 32749853  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  32749854 tatgtgatttt 32749864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 275 - 372
Target Start/End: Complemental strand, 28524544 - 28524447
Alignment:
Q  275 gacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattt 372  Q
    ||||||||||||||||||| |||  | ||||| ||||||||| ||||| |||||| |||  ||| |||||| | || |||||||||||||||||||||    
T  28524544 gacacttctcagattaggcgtgtttctgtgtcagacacgtgttgtgtccgacaccaacacaacaacgacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 4882678 - 4882737
Alignment:
Q  316 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||| | |||||||    
T  4882678 tcgtgtctgacaccgacacgacatcgacacttgtaattacactgaattatatcatttttt 4882737  T

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Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 23058389 - 23058483
Alignment:
Q  268 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgt 367  Q
    |||||| |||||||||| |||||||| |||||||||||||||||             ||||||||| |||||||||||||||| |||||||| |||||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccggtgtcggaca-------------acaccgacacgacaccgacacttgtaattacactggattatgt 23058475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 18420363 - 18420473
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||||||||||||| |||||||| ||||    ||||| |||| |||| |||| ||||  ||||  |||||||||||| || || || |||||    
T  18420363 ctatgaagcacagacacttctcggattaggcgtgtcataatgtcgaacacttgtcatgtccgacatggacacaacaccgacacttataattgcattgaat 18420462  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  18420463 tatgtgatttt 18420473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 21782744 - 21782810
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 329  Q
    ||||||||||| |||||| | |||||||| | ||||||||||| |||||||||||||| ||||||||    
T  21782744 ctatgaagcacggacactccacagattagacgtgtcccggtgttggacacgtgtcgtgcctgacacc 21782810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 38117099 - 38117165
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 329  Q
    ||||||||||| |||||  ||| |||||||| |||||||||||||||||||||| ||||| ||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacc 38117165  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 312
Target Start/End: Complemental strand, 12748786 - 12748737
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 312  Q
    |||||||||||||||||| |||| |||||||||||||||||||| |||||    
T  12748786 ctatgaagcacagacactcctcaaattaggcatgtcccggtgtccgacac 12748737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 28596587 - 28596518
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||| |||||| ||| |||||||  |||||  ||||||||||||||||||||| ||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgaca 28596518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 12668352 - 12668464
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| || ||| |||  ||||||  ||||||  |||| || ||||||||| ||  | ||||||| ||||||||||||| || |||||||||||    
T  12668352 ctatgaagcacggatactcctcgaattaggtgtgtcccaatgtcagatacgtgtcgtatccaataccgacacgacaccgacacttataattacactgaat 12668451  T
Q  363 tatgtgatttttt 375  Q
    ||||| |||||||    
T  12668452 tatgtcatttttt 12668464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 19536398 - 19536438
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  19536398 gacaccgacacttgtaattacactgaattatgtgatttttt 19536438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 375
Target Start/End: Complemental strand, 28678037 - 28677927
Alignment:
Q  259 tatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacact 358  Q
    |||||||||||||| ||||||| ||| | | || | |||||| ||||||||||| |||||||| |||||||     |||||||| || | || |||||||    
T  28678037 tatcctatgaagcatagacactcctccggtcagccgtgtccctgtgtcggacacttgtcgtgtttgacacc-----gacaccga-acatataattacact 28677944  T
Q  359 gaattatgtgatttttt 375  Q
    |||||||||||||||||    
T  28677943 gaattatgtgatttttt 28677927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 37497241 - 37497169
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgaca 333  Q
    |||||||||||| |||||||||  |||||| |||||||||||| || ||| ||||| ||||||||||||||||    
T  37497241 cctatgaagcacggacacttctgggattagccatgtcccggtgccgaacatgtgtcggtgtctgacaccgaca 37497169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 15972993 - 15972922
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||| |||| |  || |||||||  |||||||| ||||||||||||||||||| ||||||||||    
T  15972993 cctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgaca 15972922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 36096331 - 36096414
Alignment:
Q  290 aggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||| |||||| ||||| ||||||||||||||| |||| ||||| ||||||||||  | || |||||||| ||| |||||||||    
T  36096331 aggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattttgtgatttt 36096414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 24009414 - 24009344
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||| ||  ||| |||| |||||| ||||| ||||||||||||||| ||||||||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgaca 24009344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 329 - 375
Target Start/End: Complemental strand, 33153488 - 33153442
Alignment:
Q  329 cgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  33153488 cgacacgacacggacacttgtaattacactgaattatgtgatttttt 33153442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 375
Target Start/End: Original strand, 34337152 - 34337217
Alignment:
Q  305 tcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||| |||     ||||||||||||||||    
T  34337152 tcggacacgtgttgtgtccgacaccgacaggacaccgacacttgtaatta-----aattatgtgatttttt 34337217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 37559096 - 37559026
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||| ||| ||||| || ||| |||||||||||||||||||  ||| ||||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgaca 37559026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 333
Target Start/End: Complemental strand, 12224337 - 12224272
Alignment:
Q  268 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||| ||||| ||  |||||||| |||||| ||||||||||||| ||||||| ||||||||||    
T  12224337 aagcacaaacactccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgaca 12224272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 275 - 375
Target Start/End: Original strand, 14996171 - 14996264
Alignment:
Q  275 gacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    |||||| ||| |||||||| ||| |||||||| ||||||||| |||||      ||||| |||||||||||||||| ||||||| |||||| ||||||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacacgtgt-gtgtc------cgacaagacaccgacacttgtaattacactaaattatatgattttt 14996263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 324
Target Start/End: Original strand, 15907851 - 15907912
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctg 324  Q
    ||||||||||| ||||||  ||||||| ||| ||||||||||||||| | ||||||||||||    
T  15907851 ctatgaagcacggacactcatcagattgggcgtgtcccggtgtcggatatgtgtcgtgtctg 15907912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 39959414 - 39959475
Alignment:
Q  201 atgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 262  Q
    |||||||||||||||||||||||| | || ||||||||||| | ||| ||||||| ||||||    
T  39959414 atgatagaatagaatatttgtcatgactaattataatgattattctgtaattatgatgtatc 39959475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 328
Target Start/End: Complemental strand, 41843565 - 41843500
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 328  Q
    |||||||||||||||||| ||| ||| | || |||||| ||||||||||||||||| ||| |||||    
T  41843565 ctatgaagcacagacactcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtccgacac 41843500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 42511322 - 42511387
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 328  Q
    ||||||||||| |||||| ||| |||||| | |||||| ||||||||||||||| ||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 5040792 - 5040752
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  5040792 gacaccgacacttgtaattacattgaattatgtgatttttt 5040752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 18422021 - 18421981
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  18422021 gacaccgacacttgtaattacactgaattatgtgatatttt 18421981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 19942382 - 19942314
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||  |||||| ||| |||||||| |||||||||||| ||||| || |||||| ||||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatgccgtgtccgacaccgaca 19942314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 333
Target Start/End: Original strand, 20242665 - 20242737
Alignment:
Q  261 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||||||||||||  || ||| |||| |||||  ||||| ||||||||| ||||| ||||||||||    
T  20242665 tcctatgaagcacagacactcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtccgacaccgaca 20242737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 30335536 - 30335465
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 334  Q
    ||||||||||||| ||| |||||||||||||||| |||| |||||| ||| ||||  |||| |||||||||||    
T  30335536 cctatgaagcacatacatttctcagattaggcatatcccagtgtcgaacatgtgttatgtc-gacaccgacat 30335465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 18889519 - 18889630
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg-tgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||| ||||||| ||  | |||||  ||||| ||||||||||| | |||| |||| |||||  ||| ||||||||||| | |  ||||||||||    
T  18889519 ctatgaagcagagacactacttgggttaggtgtgtccgggtgtcggacatgcgtcggtgtccgacacaaacaagacaccgacacatatgattacactgaa 18889618  T
Q  362 ttatgtgatttt 373  Q
    ||||||||||||    
T  18889619 ttatgtgatttt 18889630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 373
Target Start/End: Complemental strand, 24067336 - 24067273
Alignment:
Q  310 cacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||| ||||| ||||||||||||| ||| ||||||||  ||||| |||||||||| |||||    
T  24067336 cacgtgttgtgtccgacaccgacatgaaaccaacacttgtgattacattgaattatgtcatttt 24067273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 37559035 - 37558996
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    |||||||||||||||| ||||| |||||||||||||||||    
T  37559035 gacaccgacacttgtaattacattgaattatgtgattttt 37558996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 22084756 - 22084871
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtccc---ggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgt--agttacac 357  Q
    ||||||||||||||||||  || |||||||| ||||||   |||||| ||||||||| ||||| ||||| |||| || |||| ||| | |  | ||||||    
T  22084756 ctatgaagcacagacactcatcggattaggcgtgtcccggtggtgtcagacacgtgttgtgtccgacactgacacgataccggcacatataaaattacac 22084855  T
Q  358 tgaattatgtgatttt 373  Q
    |||||||| |||||||    
T  22084856 tgaattatatgatttt 22084871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 29367283 - 29367382
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||| ||| | ||| ||||||||||||| ||||||||||||| |||          ||||||| || ||||||| ||||| ||||||| |||    
T  29367283 ctatgaagcacaaacattcctcggattaggcatgtctcggtgtcggacacatgt----------accgacacgataccgacatttgtaattacactaaat 29367372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 18841013 - 18841054
Alignment:
Q  334 tgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||||| ||||||| |||||||| |||||||    
T  18841013 tgacaccgacacttgtaattacacttaattatgtaatttttt 18841054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 974805 - 974765
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||| ||||||| ||||    
T  974805 gacaccgacacttgtaattacactgaataatgtgatctttt 974765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 4207949 - 4207905
Alignment:
Q  300 cggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgaca 344  Q
    |||||||| |||||||||||||| |||||||||| || |||||||    
T  4207949 cggtgtcgaacacgtgtcgtgtccgacaccgacacgataccgaca 4207905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 15972931 - 15972891
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| |||||||||||| ||| |||||||    
T  15972931 gacaccgacacttgtaattacactgaattgtgtaatttttt 15972891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 20539675 - 20539715
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||| |||||| |||||||||    
T  20539675 gacaccgacacttgtaattacactaaattatatgatttttt 20539715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 21624325 - 21624285
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| |||||||||||||||  |||||||    
T  21624325 gacaccgacacttgtaattacactgaattatgctatttttt 21624285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 319
Target Start/End: Original strand, 31456560 - 31456616
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgt 319  Q
    ||||||||||| |||| || || ||||||||||||| || ||||| |||||||||||    
T  31456560 ctatgaagcacggacatttttccgattaggcatgtctcgatgtcgaacacgtgtcgt 31456616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 44635556 - 44635520
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatt 371  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  44635556 gacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 44635612 - 44635568
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcg 307  Q
    ||||||||||| |||||| |||||||||||| |||| ||||||||    
T  44635612 ctatgaagcacggacactcctcagattaggcgtgtctcggtgtcg 44635568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 263 - 374
Target Start/End: Complemental strand, 241724 - 241613
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||| |||||| ||| ||||||||||||  || ||||||| |||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaat 241625  T
Q  363 tatgtgattttt 374  Q
    ||||||||||||    
T  241624 tatgtgattttt 241613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 313
Target Start/End: Original strand, 236913 - 236964
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 313  Q
    ||||||||||||||||||| |||||||||||  |||||||||||| ||||||    
T  236913 cctatgaagcacagacactcctcagattaggtgtgtcccggtgtcagacacg 236964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 373
Target Start/End: Original strand, 24613629 - 24613740
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||  |||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  24613629 cctatgaagcacggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaa 24613728  T
Q  362 ttatgtgatttt 373  Q
    ||||||||||||    
T  24613729 ttatgtgatttt 24613740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 373
Target Start/End: Original strand, 30982808 - 30982917
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||| ||||||  |  |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| |    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaat 30982907  T
Q  364 atgtgatttt 373  Q
    ||||||||||    
T  30982908 atgtgatttt 30982917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 22234818 - 22234931
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    ||||||||||||  ||||||||| ||||||   ||||| |||||||||||||||||||||| |||||||||| ||||||||||| |  | ||||||||||    
T  22234818 cctatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacacgtgtcgtgtcagacaccgacacgacaccgacacatagaattacactgaa 22234917  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  22234918 ttatgtgatttttt 22234931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 265 - 375
Target Start/End: Complemental strand, 19312463 - 19312353
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||| ||| ||||||||||||||||| | |||| |||||||||||||||||||| || |||| ||||| |||||||| |||| || ||||||||||| |    
T  19312463 atgaaacacggacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatca 19312364  T
Q  365 tgtgatttttt 375  Q
    |||||||||||    
T  19312363 tgtgatttttt 19312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 263 - 374
Target Start/End: Complemental strand, 47264116 - 47264005
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||||||| ||  || |||||||| ||||| |||||| |||| ||||||| ||||||||| |||||||| ||||| ||||| |||||| ||||    
T  47264116 ctatgaagcacagacgctcttcggattaggcgtgtcctggtgtcagacatgtgtcgtatctgacaccaacatgacatcgacatttgtaattacacagaat 47264017  T
Q  363 tatgtgattttt 374  Q
    ||||||||||||    
T  47264016 tatgtgattttt 47264005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 19482799 - 19482686
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    ||||||||||||  ||||| ||| |||||||  |||||| |||||||||||||||||||||  | ||||||| |||||| ||||||||| |||||| |||    
T  19482799 cctatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaa 19482700  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||| ||||    
T  19482699 ttatgtgatatttt 19482686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 23292926 - 23292996
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgaca 23292996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 375
Target Start/End: Original strand, 3947702 - 3947807
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||| |||||| ||| |||||||  ||||| |||||||||||||||||||||      |||||| ||||| |||||||||| ||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgt------ccgacacgacactgacacttgtaattacactgaatt 3947795  T
Q  364 atgtgatttttt 375  Q
    ||| ||||||||    
T  3947796 atgcgatttttt 3947807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 375
Target Start/End: Original strand, 27706125 - 27706218
Alignment:
Q  282 ctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||| ||||||||| ||||| |||||||||||| ||||   ||| |||||  ||||||||| ||||||| ||||||||||||||||    
T  27706125 ctcagattaggcgtgtcccggtatcggatacgtgtcgtgtccgacattaacacgacactcacacttgtaattacactaaattatgtgatttttt 27706218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 715545 - 715648
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| |||||||| |||||| |||||||||| |||||||||         ||| |||||| ||||||||| |||||||||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 715635  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  715636 tatgtgatttttt 715648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 752871 - 752974
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| |||||||| |||||| |||||||||| |||||||||         ||| |||||| ||||||||| |||||||||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 752961  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  752962 tatgtgatttttt 752974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 27442721 - 27442661
Alignment:
Q  202 tgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 262  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||| ||||||    
T  27442721 tgatagaatagaatattagtcataattagttataattattttcctgtaattatgctgtatc 27442661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 8423658 - 8423729
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 334  Q
    |||||| |||| |||||||||| |||||||| |||||||||||||||||  ||||||||| |||||||||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacat 8423729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 265 - 371
Target Start/End: Original strand, 28000672 - 28000779
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc-gacatgacaccgacacttgtagttacactgaatt 363  Q
    ||||||||| ||||||  ||||||||||  |||| ||||||| |||||||||||||    ||||  ||||||||||||||||||||| ||||||||||||    
T  28000672 atgaagcacggacactcatcagattaggtgtgtctcggtgtcagacacgtgtcgtgaacaacacttgacatgacaccgacacttgtaattacactgaatt 28000771  T
Q  364 atgtgatt 371  Q
    || |||||    
T  28000772 atatgatt 28000779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 340
Target Start/End: Complemental strand, 24343632 - 24343554
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacatgacacc 340  Q
    ||||||||||| |||||| |||||| ||||| ||||||||||||||||||| ||| ||||| |||||||||| ||||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgacacc 24343554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 34306744 - 34306814
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||  ||| | |||||||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 34306814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 373
Target Start/End: Complemental strand, 848080 - 847971
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||| ||| |||||| ||  |||||||  |||||||||||  ||||||| ||||||| |||||| ||| |||||||||||||||| ||| | ||||||    
T  848080 tatgaaacacggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaatt 847981  T
Q  364 atgtgatttt 373  Q
    |||| |||||    
T  847980 atgtaatttt 847971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 4383447 - 4383386
Alignment:
Q  313 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    ||||||||| ||||||||||| ||||| |||| ||||| |||||||||||||||||||||||    
T  4383447 gtgtcgtgtttgacaccgacacgacactgacatttgtaattacactgaattatgtgattttt 4383386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 266 - 375
Target Start/End: Complemental strand, 28084640 - 28084540
Alignment:
Q  266 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattat 365  Q
    |||||||| |||||| ||| |||||||| |||||| ||||||||||||||||         ||||||| ||||| |||||||||| ||||| ||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtc---------accgacacgacacagacacttgtaattacattgaattat 28084550  T
Q  366 gtgatttttt 375  Q
    ||||||||||    
T  28084549 gtgatttttt 28084540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 14465006 - 14465070
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 328  Q
    |||||||||| |||||| |||||||||| | |||||| |||||| ||||||||||||||||||||    
T  14465006 tatgaagcacggacactcctcagattagacgtgtcccagtgtcgaacacgtgtcgtgtctgacac 14465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 5414101 - 5414211
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||  ||| |||  |||||| ||||| ||||||||||||||| ||||| |||| |||||||| || | || |||||||| ||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcat 5414200  T
Q  363 tatgtgatttt 373  Q
    | |||||||||    
T  5414201 tttgtgatttt 5414211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 35157925 - 35157995
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||||||| ||||| || ||| ||||||| ||||| |||||||||| ||||||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgaca 35157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 373
Target Start/End: Complemental strand, 36635449 - 36635344
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| ||||||  || |||||||| |||||||||||| ||| |||||||||||||||||     | ||||  |||| | || |||||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacac-----tcacacgaacacatataattacactgaat 36635355  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  36635354 tatgtgatttt 36635344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 30838335 - 30838238
Alignment:
Q  268 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattat 365  Q
    |||||| |||||| ||| | |||||| ||||  |||||||||||||||||| ||| ||||| |||| |||||||| |||| || ||||||| ||||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacacgtgtcgcgtccgacactgacacgacaccgatacttataattacactaaattat 30838238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 35161156 - 35161096
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 322  Q
    |||||||||||| ||||||| || |||||||  ||| ||||||||||||||||||||||||    
T  35161156 cctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacacgtgtcgtgtc 35161096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 42640587 - 42640547
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  42640587 gacaccgacacttgtaattacactgaattatgtgatttttt 42640547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 335 - 374
Target Start/End: Original strand, 12797339 - 12797378
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  12797339 gacaccgacacttgtaattacactgaattatgtgattttt 12797378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 21345473 - 21345544
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 334  Q
    |||||||||||| | ||| ||| |||||||||||| ||||||| ||| | || |||||||||||||||||||    
T  21345473 ctatgaagcacacatactcctcggattaggcatgtaccggtgttggatatgtatcgtgtctgacaccgacat 21345544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 29205501 - 29205462
Alignment:
Q  336 acaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgatttttt 29205462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 37496807 - 37496724
Alignment:
Q  290 aggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||| |||||||||||| |||| |||||||||| | || |||||  ||||||||||||||  ||||| |||||||||| |||||    
T  37496807 aggcgtgtcccggtgtccgacatgtgtcgtgtccggcaacgacacaacaccgacacttgtgattacattgaattatgtcatttt 37496724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 374
Target Start/End: Complemental strand, 40481723 - 40481655
Alignment:
Q  300 cggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    |||||||||||||||||||||||  |||||||||| ||||      ||||| |||||||||||||||||||||||    
T  40481723 cggtgtcggacacgtgtcgtgtccaacaccgacataacac------ttgtaattacactgaattatgtgattttt 40481655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 2361915 - 2361985
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| ||||||  ||||||||||  |||| ||||||| |||||| |||||||| ||||||||||    
T  2361915 ctatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacacgagtcgtgtccgacaccgaca 2361985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 12895214 - 12895284
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||  ||||| ||| |||||||| ||||||| ||||||| || ||||||||| ||||||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgaca 12895284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 18513174 - 18513224
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 312  Q
    |||||||||||| |||||| |||||||||||| ||||| ||||||||||||    
T  18513174 cctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 49431133 - 49431075
Alignment:
Q  275 gacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||| ||| ||| |||| ||||||||||| |||||||||||||||| ||||||||||    
T  49431133 gacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgaca 49431075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 11596296 - 11596345
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggaca 311  Q
    |||||||||||| |||||| |||||||||||| ||||||| |||||||||    
T  11596296 cctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 11596348 - 11596393
Alignment:
Q  330 gacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||| |||||| ||||||||| ||||||||||||||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgatttttt 11596393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 11931410 - 11931298
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg-tgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    ||||||||||| |||||| |   |||||||  ||||| ||||||||||| | |||| |||| || |||||||||||| |||||| | || ||||||| ||    
T  11931410 ctatgaagcacggacactccatggattaggtgtgtcctggtgtcggacatgcgtcggtgtc-gataccgacatgacatcgacacatatatttacactaaa 11931312  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  11931311 ttatgtgatttttt 11931298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 372
Target Start/End: Original strand, 46083920 - 46084029
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||  |||||| |||  || |||| |||||| | ||| ||||||||||||||| || || |||| ||||||||||| | || |||||||  ||    
T  46083920 ctatgaagcatggacactcctcttataaggcgtgtccccgcgtcagacacgtgtcgtgtccgatactgacacgacaccgacacatataattacactagat 46084019  T
Q  363 tatgtgattt 372  Q
    ||||||||||    
T  46084020 tatgtgattt 46084029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 313
Target Start/End: Original strand, 944600 - 944652
Alignment:
Q  261 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 313  Q
    ||||||||||| |||| ||| |||||||||||  |||||||||||||||||||    
T  944600 tcctatgaagctcagagactcctcagattaggtgtgtcccggtgtcggacacg 944652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 4157266 - 4157198
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||||||| |||  ||||||  | || |||||||||||| |||||||||| ||||||||||    
T  4157266 atgaagcacagacactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgaca 4157198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 4157553 - 4157485
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||| ||||||| |||  ||||||| | || |||||||||||| |||||||||| ||||||||||    
T  4157553 atgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgaca 4157485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 343
Target Start/End: Original strand, 15724483 - 15724563
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgac 343  Q
    |||||||||||| | ||| ||| |||||||| |||   |||||| ||||||||| ||||| |||||||||| |||||||||    
T  15724483 ctatgaagcacataaactcctcggattaggcgtgttttggtgtctgacacgtgttgtgtccgacaccgacacgacaccgac 15724563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 21945561 - 21945521
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  21945561 gacaccgacacttgtaattacactgaattatgtcatttttt 21945521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 23292987 - 23293027
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  23292987 gacaccgacacttgtaattatactgaattatgtgatttttt 23293027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 28964249 - 28964289
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  28964249 gacacagacacttgtaattacactgaattatgtgatttttt 28964289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 30299005 - 30298965
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  30299005 gacaccgacacttgtaattacactgaattatgtcatttttt 30298965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 30327873 - 30327833
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  30327873 gacaccgacacttgtaattacactgaattatgtcatttttt 30327833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 49431084 - 49431044
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  49431084 gacaccgacacttttaattacactgaattatgtgatttttt 49431044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 51701340 - 51701276
Alignment:
Q  311 acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||  |||||||||| |||||  ||||||||| ||||||| |||||||| |||||||    
T  51701340 acgtgtcgtgttcgacaccgacacgacactaacacttgtaattacactcaattatgtaatttttt 51701276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 53381529 - 53381601
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgaca 333  Q
    |||||||||||| |||||| ||| |||||||  ||||||||||||||| ||| ||| ||||| ||||||||||    
T  53381529 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacaccgaca 53381601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 54580024 - 54580064
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  54580024 gacaccgacacttataattacactgaattatgtgatttttt 54580064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 5922532 - 5922579
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggaca 311  Q
    ||||||||| ||||||| |||||||||||| |||||| ||||||||||    
T  5922532 tatgaagcagagacactcctcagattaggcgtgtcccagtgtcggaca 5922579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 336 - 375
Target Start/End: Original strand, 6485613 - 6485652
Alignment:
Q  336 acaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgatttttt 6485652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 335 - 374
Target Start/End: Original strand, 6879466 - 6879505
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  6879466 gacaccgacacttgtaattacacttaattatgtgattttt 6879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 12895110 - 12895157
Alignment:
Q  328 ccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||| |||||||||||||||| ||||  ||||||||||||||||||    
T  12895110 ccgacacgacaccgacacttgtaattactttgaattatgtgatttttt 12895157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 16073452 - 16073413
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  16073452 gacaccgacacttgtaattacactgaattatgcgattttt 16073413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 18966628 - 18966569
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 322  Q
    ||||||||||| |||||| || ||||||||| | ||||| |||||||||||||| |||||    
T  18966628 ctatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgtc 18966569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 29205587 - 29205528
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 322  Q
    |||||||||||  ||||| ||| |||||||| |||||| |||||||||| ||||||||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtc 29205528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 37203371 - 37203324
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggac 310  Q
    ||||||||||| |||||||||| |||||| | ||||||||||||||||    
T  37203371 ctatgaagcacggacacttctcggattagacgtgtcccggtgtcggac 37203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 904020 - 903942
Alignment:
Q  295 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||||| ||||||||||| |||||||||  ||||||| | || || || || | || ||||||||||||||||||||||    
T  904020 tgtcccagtgtcggacacatgtcgtgtccaacaccgatacgatactgatacatataattacactgaattatgtgatttt 903942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 3712458 - 3712504
Alignment:
Q  268 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgt 314  Q
    |||||| |||||| |||||||||| | ||||||||||||||||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggacacgt 3712504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 345
Target Start/End: Original strand, 5225542 - 5225624
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacac 345  Q
    |||||||||||||| ||| |  ||||||||| |||||||| ||| || | || ||||||| |||||| ||| |||||||||||    
T  5225542 ctatgaagcacagatactccatagattaggcgtgtcccggggtccgatatgtatcgtgtccgacaccaacacgacaccgacac 5225624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 7214465 - 7214523
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtg 320  Q
    ||||||||||||| ||| |  || |||||||||| ||||||||||||||| ||||||||    
T  7214465 cctatgaagcacaaacaatcatcggattaggcatttcccggtgtcggacatgtgtcgtg 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 16886726 - 16886660
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 329  Q
    |||| |||||| ||||||||| ||||||| | ||| |||||||||||||| ||| ||||||| ||||    
T  16886726 ctatcaagcacggacacttctgagattagccgtgttccggtgtcggacacatgtagtgtctgtcacc 16886660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 21945618 - 21945552
Alignment:
Q  267 gaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||| ||||||| ||| |||||||| |||  |||||||||||| ||||| |||| ||||||||||    
T  21945618 gaagcatagacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccgacaccgaca 21945552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 375
Target Start/End: Original strand, 11651142 - 11651175
Alignment:
Q  342 acacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||| |||||||||||||||||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttt 11651175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 311
Target Start/End: Complemental strand, 16184951 - 16184902
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggaca 311  Q
    ||||||||||||| ||||| ||| |||||||| |||||| ||||||||||    
T  16184951 cctatgaagcacaaacactcctcggattaggcgtgtcccagtgtcggaca 16184902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 312
Target Start/End: Original strand, 34594208 - 34594253
Alignment:
Q  267 gaagcacagacacttctcagattaggcatgtcccggtgtcggacac 312  Q
    |||||||| |||||||||| |||||||||||||| ||||| |||||    
T  34594208 gaagcacatacacttctcatattaggcatgtccctgtgtcagacac 34594253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 373
Target Start/End: Original strand, 38148667 - 38148764
Alignment:
Q  276 acacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||||  || ||||| ||| || ||||| || ||||||||||||  ||||| ||| |||| ||||| ||  | ||||||||||||||||||||||    
T  38148667 acacttcttcgaataggcgtgttccagtgtcagatacgtgtcgtgtccaacaccaacacgacatcgacatttaaaattacactgaattatgtgatttt 38148764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 373
Target Start/End: Original strand, 5775353 - 5775397
Alignment:
Q  329 cgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||||||||||||| | || ||||||| ||||||||||||||    
T  5775353 cgacatgacaccgacacatataattacacttaattatgtgatttt 5775397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 333
Target Start/End: Complemental strand, 10133809 - 10133757
Alignment:
Q  282 ctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgaca 333  Q
    |||||||||||  ||||| ||||||||||||| ||| ||||||||||||||||    
T  10133809 ctcagattaggtgtgtcctggtgtcggacacgcgtcagtgtctgacaccgaca 10133757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 40965389 - 40965341
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 312  Q
    |||||||||| |||||| |||||||||||| ||||  ||||||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtcttggtgtcggacac 40965341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 264 - 373
Target Start/End: Original strand, 29447040 - 29447149
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||| |||||| ||  |||||||| ||||| |||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaatt 29447139  T
Q  364 atgtgatttt 373  Q
    ||||||||||    
T  29447140 atgtgatttt 29447149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 15816058 - 15816170
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||  ||||||||||| |||||| ||| ||||||||||||| || ||||||| |||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaat 15816157  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  15816158 tatgtgatttttt 15816170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 22652106 - 22651994
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| |||||| | |||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| ||| | |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaat 22652007  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  22652006 tatgtgatttttt 22651994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 29510232 - 29510345
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||| |||||||  ||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||| ||| ||||||    
T  29510232 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaa 29510331  T
Q  362 ttatgtgatttttt 375  Q
    || |||||||||||    
T  29510332 ttttgtgatttttt 29510345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 8343447 - 8343334
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||||||||||  || |||||||| |||||||||||||||||||||||||||| |||||    | ||||| |||||||||| ||||||| ||    
T  8343447 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaa 8343348  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  8343347 ttatgtgatttttt 8343334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 263 - 370
Target Start/End: Complemental strand, 29447574 - 29447467
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| |||||| | |||||||||||||||||| |||||||||||||||||||| |||||| |||| | || ||||||| |||    
T  29447574 ctatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatgtcgtgtctgacaccgacacgacaccaacacatataattacacttaat 29447475  T
Q  363 tatgtgat 370  Q
    ||||||||    
T  29447474 tatgtgat 29447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 295 - 375
Target Start/End: Original strand, 2572017 - 2572097
Alignment:
Q  295 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||| ||||||| ||||||||||||||||    
T  2572017 tgtcccggtatcggacacgtgtcgtgtccgacacagacacgacaccgacacttgtaattacactaaattatgtgatttttt 2572097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 21465542 - 21465430
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| |||| ||||||| | |||| |||| |||||||||||||||| ||||| |||| |||||| ||||||||| |||||  ||||    
T  21465542 ctatgaagcacggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaat 21465443  T
Q  363 tatgtgatttttt 375  Q
    ||| |||||||||    
T  21465442 tatatgatttttt 21465430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 22197670 - 22197783
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca-tgacaccgacacttgtagttacactga 360  Q
    ||||| |||||| |||||| |||||||||||| ||  ||||||||||||||||||| |||| |||| ||||| |||||| |||||||||| ||||||| |    
T  22197670 cctataaagcacggacactcctcagattaggcgtgatccggtgtcggacacgtgtcatgtccgaca-cgacactgacactgacacttgtaattacactaa 22197768  T
Q  361 attatgtgatttttt 375  Q
    ||||||||| |||||    
T  22197769 attatgtgaattttt 22197783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 26902104 - 26902214
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||||||| |||| |||||| ||| | ||||||||||||||| |||||  | | ||||||||||| | || |||||||||||    
T  26902104 ctatgaagcacggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaat 26902203  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  26902204 tatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 28745628 - 28745516
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||   ||||| | |||| ||||| |||||| |||||||||| |||||||||| |||| ||||| ||||||||||| |||||    
T  28745628 ctatgaagcacggacactccttgaattagacttgtctcggtgacggacaggtgtcgtgtccgacaccgacacgacatcgacatttgtagttacattgaat 28745529  T
Q  363 tatgtgatttttt 375  Q
    ||||||| |||||    
T  28745528 tatgtgaattttt 28745516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 11686071 - 11686012
Alignment:
Q  201 atgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgta 260  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||    
T  11686071 atgatagaatagaatatttgtcataattagttttaatgatttccctgtaattatgttgta 11686012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 11927015 - 11927125
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| ||||||  || |||||||| |||| || ||| ||| || |||||||| ||||||| ||| ||||||||||| | || |||||||||||    
T  11927015 ctatgaagcacggacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaat 11927114  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  11927115 tatgtgatttt 11927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 4673353 - 4673466
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    ||||||||||||||||||| ||  |||||||| ||| ||||||||||| | | |||||||| |||| | ||| ||||| || ||||||| ||||||||||    
T  4673353 cctatgaagcacagacactccttggattaggcgtgttccggtgtcggatatgcgtcgtgtccgacatcaacaagacactgatacttgtaattacactgaa 4673452  T
Q  362 ttatgtgatttttt 375  Q
    || | |||||||||    
T  4673453 ttttatgatttttt 4673466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 24858135 - 24858030
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||| ||||| ||| |||||||| |||||||| || |||||| ||||||||      |||||| |||| ||||||||||| |||||||||||    
T  24858135 ctatgaagcacaaacactcctctgattaggcgtgtcccggcgtgggacacatgtcgtgt------ccgacacgacaacgacacttgta-ttacactgaat 24858043  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  24858042 tatgtgatttttt 24858030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 44206337 - 44206277
Alignment:
Q  202 tgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 262  Q
    |||||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||||||    
T  44206337 tgatagaatagagtattagtcataattagttataattattttcctgtaattatgttgtatc 44206277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 5813712 - 5813641
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||| ||||||| |||||| |||  ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  5813712 cctacgaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgaca 5813641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 373
Target Start/End: Complemental strand, 11944795 - 11944685
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||  |||||  || |||||||| |||| |||||||||| || |||||||| ||||| | ||| ||||||||||| | || ||||||||| |    
T  11944795 ctatgaagcacgaacactcatcggattaggcgtgtctcggtgtcggatacatgtcgtgtatgacatcaacacgacaccgacacatataattacactgagt 11944696  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  11944695 tatgtgatttt 11944685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 262
Target Start/End: Original strand, 19177405 - 19177463
Alignment:
Q  204 atagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 262  Q
    ||||||||||||||| |||||||||||||||||| ||||||||  ||||||||||||||    
T  19177405 atagaatagaatattagtcataattagttataattattttcctctaattatgttgtatc 19177463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 36450694 - 36450760
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 329  Q
    |||||||||||||||||| ||| |||||||| ||||| ||||||||||||| |||||||| ||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacc 36450760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 926730 - 926798
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||| |||||| ||| ||| | ||||||||||||||||||||||||||| ||| ||||||||||    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgaca 926798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 25566910 - 25566859
Alignment:
Q  324 gacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||||||||||    
T  25566910 gacaccaacacgacaccgacacttgtaattacactgaattatgtgatttttt 25566859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 373
Target Start/End: Complemental strand, 11803389 - 11803279
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| |||||| | ||| || |||||||||| ||||||| ||  ||||| |||  ||||| |||| | || |||||||||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggacatgtgtcgtatccaacaccaacacaacaccaacacatataattacactgaat 11803290  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  11803289 tatgtgatttt 11803279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 12570458 - 12570547
Alignment:
Q  283 tcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||||||| ||||| |||||||||||||||| |||||||||||||| |  ||| |||||| | || ||||||| ||||||||| ||||    
T  12570458 tcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccgata-cacatcgacacatataattacacttaattatgtgttttt 12570547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 375
Target Start/End: Original strand, 24727684 - 24727793
Alignment:
Q  266 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattat 365  Q
    ||||||||  ||||||||| |||||||| ||| | ||| | ||||||||||| |||  || |||||||||||||  ||||||| | |||||||| |||||    
T  24727684 tgaagcacgaacacttctcggattaggcgtgttctggtattggacacgtgtcatgttcgataccgacatgacactaacacttgaaattacactgcattat 24727783  T
Q  366 gtgatttttt 375  Q
    || |||||||    
T  24727784 gtaatttttt 24727793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 4948710 - 4948670
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  4948710 gacaccgacacttgtaattacactgaattatgtgatttttt 4948670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 331
Target Start/End: Original strand, 12570684 - 12570732
Alignment:
Q  283 tcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccga 331  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||||||    
T  12570684 tcagattaggcgtgtcctggtgtcggacacgtgtagtgtctgacaccga 12570732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 27067231 - 27067337
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| ||||||  | || |||||||  ||||| ||||||||| |||||||||| ||||| |||||||||| |||||  ||||    
T  27067231 ctatgaagcacggacactcctcggattag--acgttccggtgttcgacacatgtcgtgtccgacaccgacacgacactgacacttgtaattaca--gaat 27067326  T
Q  363 tatgtgatttt 373  Q
    ||||| |||||    
T  27067327 tatgtaatttt 27067337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 34450961 - 34451037
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacac 339  Q
    ||||||||||| |||||| ||  ||| |||| |||||| ||||| ||||||||||||||| |||||||||| |||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacacgacac 34451037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 14134818 - 14134747
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 334  Q
    ||||||| ||| |||||| |||  ||||||| ||||| |||| |||||||||||||||| ||||||||||||    
T  14134818 ctatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacacgtgtcgtgtttgacaccgacat 14134747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 22943301 - 22943348
Alignment:
Q  275 gacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 322  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  22943301 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc 22943348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 372
Target Start/End: Original strand, 28384977 - 28385032
Alignment:
Q  317 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattt 372  Q
    |||||||||||| |||||||||||||||| | || ||||||||||||||| |||||    
T  28384977 cgtgtctgacactgacatgacaccgacacatataattacactgaattatgagattt 28385032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 260
Target Start/End: Original strand, 31343660 - 31343715
Alignment:
Q  205 tagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgta 260  Q
    ||||||| |||||||||||||||||||| ||||||||| || | ||||||||||||    
T  31343660 tagaatataatatttgtcataattagttttaatgatttccccgtaattatgttgta 31343715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 340 - 375
Target Start/End: Original strand, 41831946 - 41831981
Alignment:
Q  340 cgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||||||||||||||||||||||||    
T  41831946 cgacacttgtagttacactgaattatgtgatttttt 41831981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 3951476 - 3951546
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| || ||| ||  |||||||| ||| || ||||| ||||||||||||||||||||||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgaca 3951546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 4863962 - 4863904
Alignment:
Q  202 tgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgta 260  Q
    ||||||||||||||||||  ||||||||||| ||||||||| |||| ||||||| ||||    
T  4863962 tgatagaatagaatatttaccataattagttttaatgatttccctgtaattatgctgta 4863904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 8343087 - 8343037
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 312  Q
    |||||||||||||||||||  || |||||||| ||||||||||||||||||    
T  8343087 cctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacac 8343037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 16641909 - 16641974
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 328  Q
    |||||||||||||||||| ||| |||||||  |||||||||||  ||||| ||||||||| |||||    
T  16641909 ctatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacac 16641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 331
Target Start/End: Complemental strand, 31557092 - 31557047
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccga 331  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||||    
T  31557092 gattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccga 31557047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 40332248 - 40332211
Alignment:
Q  336 acaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgatttt 40332211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 8343030 - 8342990
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  8343030 gacaccgacacttgtaattacactaaattatgtgatttttt 8342990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 14639735 - 14639787
Alignment:
Q  268 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtg 320  Q
    ||||||||| ||| ||  |||||||||||||||||||||||||| ||||||||    
T  14639735 aagcacagatactccttggattaggcatgtcccggtgtcggacatgtgtcgtg 14639787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 20679337 - 20679405
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||  |||||| ||| | | |||| |||||||||||||||||||||| | ||||||||||||||    
T  20679337 atgaagcatggacactcctcggttaaggcgtgtcccggtgtcggacacgtgttgcgtctgacaccgaca 20679405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 20873127 - 20873087
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  20873127 gacaccgacacttgtaattacactaaattatgtgatttttt 20873087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 300 - 371
Target Start/End: Original strand, 24362167 - 24362239
Alignment:
Q  300 cggtgtcggacacgtgtcgtgtctg-acaccgacatgacaccgacacttgtagttacactgaattatgtgatt 371  Q
    ||||| ||||||||||||||||| | ||||||||| ||||  ||||| | || ||||||||||||||||||||    
T  24362167 cggtgccggacacgtgtcgtgtccggacaccgacacgacattgacacatataattacactgaattatgtgatt 24362239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 374
Target Start/End: Complemental strand, 31557055 - 31557015
Alignment:
Q  334 tgacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  31557055 tgacaccgaaacttgtaattacactgaattatgtgattttt 31557015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 324 - 375
Target Start/End: Original strand, 13436954 - 13437005
Alignment:
Q  324 gacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||| |||||||||||||||  ||||  ||||||||||||||||||    
T  13436954 gacaccgacacgacaccgacacttgttattaccatgaattatgtgatttttt 13437005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 340 - 375
Target Start/End: Complemental strand, 18407772 - 18407737
Alignment:
Q  340 cgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||| ||||||||||||||||||||||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttt 18407737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 24613578 - 24613539
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  24613578 gacaccgacacttgtaattacacttaattatgtgattttt 24613539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 31514930 - 31514891
Alignment:
Q  336 acaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  31514930 acaccaacacttgtagttacgctgaattatgtgatttttt 31514891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 39820547 - 39820493
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg 318  Q
    ||||||||||| |||||||||| |||||||| |||||| |||||||||||| ||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgtccc-gtgtcggacacgcgtcg 39820493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 44462158 - 44462205
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||| | ||||||||||||||||| || ||||||||||||||||||    
T  44462158 gattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgaca 44462205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 44469691 - 44469738
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||| | ||||||||||||||||| || ||||||||||||||||||    
T  44469691 gattagacgtgtcccggtgtcggacatgtatcgtgtctgacaccgaca 44469738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 24413499 - 24413569
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||||||| |||||| | ||||||| ||| |||||||  ||||||| ||||| ||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgtcccgctgttggacacgcatcgtgtccgacactgaca 24413569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 27213645 - 27213595
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 312  Q
    |||||||||||| |||||||||| |||||| | |||||||||||| |||||    
T  27213645 cctatgaagcacggacacttctcggattagccgtgtcccggtgtccgacac 27213595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 373
Target Start/End: Complemental strand, 2035866 - 2035759
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||| ||| || ||| |||||||  | ||||||||||||||||| |||| ||||||||||| || || | |||||| | || |||||||||||     
T  2035866 tatgaagcacggacgctactcggattaggtgtctcccggtgtcggacacgcgtcg-gtctgacaccggcacgata-cgacacctataattacactgaata 2035769  T
Q  364 atgtgatttt 373  Q
    |||| |||||    
T  2035768 atgttatttt 2035759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 4298886 - 4298927
Alignment:
Q  334 tgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||||| ||||| | ||||||||||||||||    
T  4298886 tgacaccgacacttgtaattacattaaattatgtgatttttt 4298927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 373
Target Start/End: Complemental strand, 18964309 - 18964197
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatg--acaccgacacttgtagttacactga 360  Q
    |||||||||||||||||| ||| ||| |||| |||| | ||||  |||| |||||||||   || |||||| |  |||||||||| | || ||||| |||    
T  18964309 ctatgaagcacagacactcctcggataaggcgtgtctccgtgttagacaggtgtcgtgttcaacgccgacacgacacaccgacacatataattacattga 18964210  T
Q  361 attatgtgatttt 373  Q
    |||||||||||||    
T  18964209 attatgtgatttt 18964197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 372
Target Start/End: Complemental strand, 24669491 - 24669454
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgattt 372  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  24669491 gacaccgacacttgtaattacactgaattatgtaattt 24669454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 38487155 - 38487212
Alignment:
Q  261 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg 318  Q
    |||||||||||||||||||| ||| ||||| |  ||||| ||||||||||||| ||||    
T  38487155 tcctatgaagcacagacactcctcggattatgtgtgtccgggtgtcggacacgcgtcg 38487212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 375
Target Start/End: Original strand, 41838131 - 41838164
Alignment:
Q  342 acacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||| |||||||||||||||||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttt 41838164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 3025668 - 3025600
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||| |||||| ||| |||||| | |||| | ||||| ||||||||||||||| ||||| ||||    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgaca 3025600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 4298829 - 4298896
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||| |||||| |||||||||||| |||||| |||||| |||||||||   |||||||||||||    
T  4298829 cctatgaagcac-gacactcctcagattaggcgtgtccc-gtgtcgaacacgtgtc--atctgacaccgaca 4298896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 307
Target Start/End: Original strand, 13436910 - 13436954
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcg 307  Q
    |||||||||||||||||| ||  |||||||| |||||||||||||    
T  13436910 ctatgaagcacagacactccttggattaggcgtgtcccggtgtcg 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 14692528 - 14692480
Alignment:
Q  324 gacaccgacatgacaccgacacttgtagttacactgaattatgtgattt 372  Q
    ||||| ||||||| |||||||| | ||||||||||||||||||| ||||    
T  14692528 gacacagacatgataccgacacctatagttacactgaattatgtcattt 14692480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 18407839 - 18407779
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 322  Q
    |||||||||||| |||||| |||  ||||||| |||||  |||||||||| ||||||||||    
T  18407839 cctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtc 18407779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 22596052 - 22596012
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||| ||||||||| |||||||||||||||| |||||||    
T  22596052 gacaccaacacttgtaattacactgaattatgttatttttt 22596012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 30077388 - 30077428
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||| |||||||||| ||||||||||||||||||| ||||    
T  30077388 gacacggacacttgtaattacactgaattatgtgatgtttt 30077428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 40332307 - 40332251
Alignment:
Q  266 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 322  Q
    |||| ||| |||||| ||| ||||||||  |||||||||| ||||||||||||||||    
T  40332307 tgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtc 40332251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 41961578 - 41961691
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||||| || ||||||| |||||||||||||||| |||||| |||    
T  41961578 cctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaa 41961677  T
Q  362 ttatgtgatttttt 375  Q
    | ||||||| ||||    
T  41961678 taatgtgatatttt 41961691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 265 - 375
Target Start/End: Original strand, 4987222 - 4987332
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    |||||| || |||||| ||| |||||||| ||||||||||||||||||||||||||||  ||||||||| | |||| ||||||||| |||||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaatta 4987321  T
Q  365 tgtgatttttt 375  Q
    |||||||||||    
T  4987322 tgtgatttttt 4987332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 14209244 - 14209131
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||||||  |||||||  | ||||| ||||| |||||||||||||| |||||||||| ||||| |||||||||| ||||||||||    
T  14209244 cctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacacgtgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaa 14209145  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  14209144 ttatgtgatttttt 14209131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 374
Target Start/End: Complemental strand, 27505370 - 27505265
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| |||||      |||||||||||||||| ||||||| |||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacac------gacaccgacacttgtaattacacttaat 27505277  T
Q  363 tatgtgattttt 374  Q
    ||||||||||||    
T  27505276 tatgtgattttt 27505265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 34185052 - 34185164
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||||||||| |||| |||| ||||  |||| |||||||||||||||| |||||||||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaat 34185151  T
Q  363 tatgtgatttttt 375  Q
    | |||||||||||    
T  34185152 tgtgtgatttttt 34185164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 28812646 - 28812536
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    ||||||| ||||||||||| ||| |||||||| ||||| | ||||||||| || |||||||||||||| ||| ||||||||||||||||  |||||||||    
T  28812646 cctatgaggcacagacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaa 28812547  T
Q  362 ttatgtgattt 372  Q
    |||||||||||    
T  28812546 ttatgtgattt 28812536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 49651715 - 49651827
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||||||| |||||||  ||||||||||||||| | |||||||||| |   |||||| |||||||||||||||| ||||| ||||    
T  49651715 cctatgaagcacggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccg-gtccgacacgacaccgacacttgtaattacagtgaa 49651813  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  49651814 ttatgtgatttttt 49651827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 375
Target Start/End: Complemental strand, 14832205 - 14832117
Alignment:
Q  287 attaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||| |||||||||||||||||||||||||||| || ||||||| ||||| |||||||||| ||||| ||| ||||||||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgatttttt 14832117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 14217021 - 14216910
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||| |||||||||| |||||||  |||||| |||||| |||||||||||||| |||||  ||| ||||| |||||||||| ||||||||||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14216922  T
Q  364 atgtgatttttt 375  Q
    || |||| ||||    
T  14216921 atatgatatttt 14216910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 14223150 - 14223039
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||| |||||||||| |||||||  |||||| |||||| |||||||||||||| |||||  ||| ||||| |||||||||| ||||||||||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacacgtgtcgtgtccgacactaacacgacacggacacttgtaattacactgaatt 14223051  T
Q  364 atgtgatttttt 375  Q
    || |||| ||||    
T  14223050 atatgatatttt 14223039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 286 - 375
Target Start/End: Original strand, 15796246 - 15796335
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||| ||| ||||||| |||||||||| ||||| |||||| ||| |||||||||| ||||| |||||||||||||| |||||||||    
T  15796246 gattaggcgtgttccggtgttggacacgtgttgtgtccgacacctacacgacaccgacaattgtaattacactgaattatatgatttttt 15796335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 374
Target Start/End: Complemental strand, 14829816 - 14829708
Alignment:
Q  267 gaagcacagacacttctcagattaggcatgtcccggtgtcggac-acgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattat 365  Q
    ||||||| |||| | |||||||||||| ||||||||||||| || || | |||||||  ||||||||| |||||||||||||||| ||||  ||||||||    
T  14829816 gaagcacggacattcctcagattaggcgtgtcccggtgtcgaaccacatctcgtgtccaacaccgacacgacaccgacacttgtaattaccatgaattat 14829717  T
Q  366 gtgattttt 374  Q
    |||||||||    
T  14829716 gtgattttt 14829708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 365
Target Start/End: Original strand, 8039764 - 8039866
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||||| |||  || ||||| || ||||||||||||||||| || || |||| |||||||||| ||||||||||| | || |||||||||||    
T  8039764 ctatgaagcacagatactcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaat 8039863  T
Q  363 tat 365  Q
    |||    
T  8039864 tat 8039866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 17005548 - 17005658
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||| ||||| ||| ||||||   ||||| |||||| |||||||||  ||||||||||| |||  |||||||||||| || |||||||||||    
T  17005548 ctatgaagcacaaacactcctcggattagaggtgtcctggtgtcagacacgtgttatgtctgacaccaacacaacaccgacacttataattacactgaat 17005647  T
Q  363 tatgtgatttt 373  Q
    ||| |||||||    
T  17005648 tatatgatttt 17005658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 55401194 - 55401124
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||| ||| |||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 55401124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 55213093 - 55212981
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||| ||||| || ||||||  ||||| || |||| ||||||||||||||||| ||| | ||||||||||  ||||||||||||||| || |||| ||    
T  55213093 cctatgtagcacggatacttcttggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaa 55212995  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  55212994 ttatgtgatttttt 55212981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 16789141 - 16789030
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| |||| ||||||  ||||||| ||| ||||| ||||| |||| ||||| |||| |||||| |||||| || |||||||||||    
T  16789141 ctatgaagcacggacactcctcaaattaggtgtgtcccg-tgttggacatgtgtcatgtccgacactgacacgacaccaacacttataattacactgaat 16789043  T
Q  363 tatgtgatttttt 375  Q
    ||| |||||||||    
T  16789042 tatatgatttttt 16789030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 375
Target Start/End: Original strand, 15999951 - 16000057
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    ||||| |||| |||||| ||  |||||||| |||||||||||||||||||||||||||  |   ||||||     |||||||||||||||||||||||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgaca-----ccgacacttgtagttacactgaatt 16000045  T
Q  364 atgtgatttttt 375  Q
    |||| |||||||    
T  16000046 atgttatttttt 16000057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 333
Target Start/End: Original strand, 40993274 - 40993345
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||  |||||| ||| |||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  40993274 cctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgaca 40993345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 11252095 - 11252025
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||||||||| ||| |||||||| ||| ||| || ||||||||||| ||||||||||||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgaca 11252025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 265 - 375
Target Start/End: Complemental strand, 28918120 - 28918019
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||||||  |||||| ||  |||||||| |||||| |||||||||||||||||||||         || |||||||||||||||| |||||||||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtc---------cacgacaccgacacttgtaattacactgaatta 28918030  T
Q  365 tgtgatttttt 375  Q
    |||||||||||    
T  28918029 tgtgatttttt 28918019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 328
Target Start/End: Original strand, 16192667 - 16192727
Alignment:
Q  268 aagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacac 328  Q
    ||||||| ||||| |||| |||||| ||||||||||||| |||||||||||||||||||||    
T  16192667 aagcacaaacactcctcatattaggtatgtcccggtgtcagacacgtgtcgtgtctgacac 16192727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 18427068 - 18426997
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 334  Q
    ||||||| ||| |||||| |||||||||||  |||||||||| |||||||||||||| || |||||||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacat 18426997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 373
Target Start/End: Complemental strand, 9800170 - 9800060
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| || ||  ||| |||||||| ||||| |||||| ||||||| || | ||||| ||||||| |||||||||||||  | |||||| ||||    
T  9800170 ctatgaagcacggaaacgcctccgattaggcgtgtccaggtgtccgacacgtatcatctctgataccgacacgacaccgacacttacaattacacggaat 9800071  T
Q  363 tatgtgatttt 373  Q
    ||||| |||||    
T  9800070 tatgtaatttt 9800060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 20503584 - 20503514
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||| |||| ||||||||||  |||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgaca 20503514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 375
Target Start/End: Complemental strand, 29508567 - 29508462
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||||||| |||||||||  |||||| | ||||||||||||||||  |||||||||| |||||| ||||     |||||| | || |||||||||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacat-----cgacacatataattacactgaatta 29508473  T
Q  365 tgtgatttttt 375  Q
    | |||||||||    
T  29508472 tatgatttttt 29508462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 34910397 - 34910335
Alignment:
Q  313 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||| |||| |||||||| | ||||||||| |||||| ||||||||||||||||||||||||    
T  34910397 gtgtcatgtccgacaccgatacgacaccgactcttgtaattacactgaattatgtgatttttt 34910335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 375
Target Start/End: Original strand, 750590 - 750659
Alignment:
Q  306 cggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||||| || ||||||| |||||||||||||||| || ||  |||||||||||| ||||    
T  750590 cggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattgcagcgaattatgtgatatttt 750659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 1509614 - 1509557
Alignment:
Q  318 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||| |||||||| | |||||||||||||||| ||||||| ||||||||||||||||    
T  1509614 gtgtcggacaccgaaacgacaccgacacttgtaattacactaaattatgtgatttttt 1509557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 2620007 - 2620092
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||||||| ||||||| || |||||| ||||||||||| |||||| || |||||| ||||   |||||||||| ||||||||||||||    
T  2620007 gattaggcgtgtcccgatgccggacatgtgtcgtgtctaacaccgccacgacaccaacac--atagttacacttaattatgtgatttt 2620092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 7171622 - 7171554
Alignment:
Q  261 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 329  Q
    |||||||||||| | ||||| ||  |||||||| |||| ||||||||||||||||||||||| ||||||    
T  7171622 tcctatgaagcatatacactccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacacc 7171554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 13806363 - 13806284
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacac 345  Q
    ||||||||| |||||| ||| |||||||| |||||||| ||||| || |||| |||||| ||||||||| |||||||||||    
T  13806363 atgaagcacggacact-ctcggattaggcgtgtcccggggtcggtcatgtgttgtgtctaacaccgacacgacaccgacac 13806284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 51206354 - 51206394
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  51206354 gacaccgacacttgtatttacactgaattatgtgatttttt 51206394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 10955048 - 10955001
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  10955048 gattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgaca 10955001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 313
Target Start/End: Complemental strand, 11610628 - 11610578
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacg 313  Q
    ||||||||||| |||||| |||||||||||| ||||||| |||||||||||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacg 11610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 375
Target Start/End: Complemental strand, 26508166 - 26508128
Alignment:
Q  337 caccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgatttttt 26508128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 14223788 - 14223864
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacatgacac 339  Q
    |||| ||||||||| ||| |||||||||||| ||||||  ||||||||||||||| ||||| |||||||||| |||||    
T  14223788 ctataaagcacagaaactcctcagattaggcgtgtccc-atgtcggacacgtgtcggtgtcggacaccgacacgacac 14223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 295 - 375
Target Start/End: Complemental strand, 25065005 - 25064927
Alignment:
Q  295 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||| ||||||||||||||| |||||| ||| || ||| ||||   || ||||||| ||||||||||||||||    
T  25065005 tgtcccggtgtcagacacgtgtcgtgtccgacaccaacacgataccaacac--ataattacactaaattatgtgatttttt 25064927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 4990950 - 4991006
Alignment:
Q  317 cgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||||| ||| ||| ||| |||||||||||| |||||||||||||||| |||||    
T  4990950 cgtgtctgataccaacacgacgccgacacttgtaattacactgaattatgtaatttt 4991006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 8587022 - 8587062
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  8587022 gacaccgacacttgtaattacacttaattatgtgatttttt 8587062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 8593195 - 8593155
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  8593195 gacaccgacacttgtaattatactgaattatgtgatttttt 8593155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 10955010 - 10954970
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  10955010 gacaccgacacttgtgattacactgaattatgtgatttttt 10954970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 373
Target Start/End: Original strand, 16192729 - 16192789
Alignment:
Q  313 gtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||||||||||||||||| |||| | |||| | || |||||||||||||||| |||||    
T  16192729 gtgtcgtgtctgacaccgacacgacatcaacacatataattacactgaattatgttatttt 16192789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 25211648 - 25211604
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcgg 308  Q
    ||||||||||| |||||||||||||||||| ||||| ||||||||    
T  25211648 tatgaagcacaaacacttctcagattaggcgtgtcctggtgtcgg 25211604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 25775567 - 25775531
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatt 371  Q
    |||||||||||||||| ||||||||||||||||||||    
T  25775567 gacaccgacacttgtaattacactgaattatgtgatt 25775531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 40052432 - 40052380
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgt 314  Q
    ||||||||||||  ||||| ||| |||||||| ||||||||||||||||||||    
T  40052432 cctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgt 40052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 12084002 - 12083959
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtc 306  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||    
T  12084002 ctatgaagcacagacactcctcagattaggcacgtccaggtgtc 12083959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 295 - 334
Target Start/End: Original strand, 14338455 - 14338494
Alignment:
Q  295 tgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 334  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  14338455 tgtcccggtgtccgatacgtgtcgtgtctgacaccgacat 14338494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 336 - 375
Target Start/End: Complemental strand, 20503522 - 20503483
Alignment:
Q  336 acaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcatttttt 20503483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 25948881 - 25948928
Alignment:
Q  328 ccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||| |||||| |||||| || ||||||||||||||||||||||||    
T  25948881 ccgacacgacaccaacacttataattacactgaattatgtgatttttt 25948928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 373
Target Start/End: Complemental strand, 11666050 - 11665964
Alignment:
Q  287 attaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||||| ||| ||| | || |||||||||||||||| ||| | ||| ||||||||||| | || ||||||| |||| |||||||||    
T  11666050 attaggcgtgttccgatatcagacacgtgtcgtgtctaacatcaacacgacaccgacacatataattacactaaattgtgtgatttt 11665964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 17276846 - 17276792
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc 317  Q
    ||||||||||| |||||||||| |||||||   ||| ||||||||||||||||||    
T  17276846 ctatgaagcacggacacttctcggattaggtgcgtctcggtgtcggacacgtgtc 17276792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 340
Target Start/End: Complemental strand, 21211413 - 21211335
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtc-gtgtctgacaccgacatgacacc 340  Q
    |||||||||||| ||||| ||| |||||||  |||||| |||||||||||| ||| |||||  ||||||||| ||||||    
T  21211413 ctatgaagcacaaacactcctcggattaggagtgtcccagtgtcggacacgcgtcggtgtcgaacaccgacacgacacc 21211335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 369
Target Start/End: Original strand, 22774063 - 22774105
Alignment:
Q  327 accgacatgacaccgacacttgtagttacactgaattatgtga 369  Q
    ||||||||||||||||||||| || |||||||||| |||||||    
T  22774063 accgacatgacaccgacacttataattacactgaaatatgtga 22774105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 35223057 - 35222987
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| |||||| ||| ||| | || |||||| ||||| |||||||||| |||| ||||||||||    
T  35223057 ctatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgaca 35222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 340 - 374
Target Start/End: Original strand, 35994744 - 35994778
Alignment:
Q  340 cgacacttgtagttacactgaattatgtgattttt 374  Q
    ||||||||||| |||||||||||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtgattttt 35994778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 10268486 - 10268527
Alignment:
Q  334 tgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||| |||||||||| ||||||| ||||||||||||||||    
T  10268486 tgacactgacacttgtaattacactaaattatgtgatttttt 10268527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 375
Target Start/End: Original strand, 21256990 - 21257027
Alignment:
Q  338 accgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  21256990 accgacacttgtaattatactgaattatgtgatttttt 21257027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 27277780 - 27277832
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgt 316  Q
    |||||||||||| ||||| ||| |||||| |||||||| |||||||||||||||    
T  27277780 ctatgaagcacatacactcctcggattagacatgtccc-gtgtcggacacgtgt 27277832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 27903759 - 27903702
Alignment:
Q  261 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcg 318  Q
    ||||||||||||| |||||||||| |||||||||||  || ||||| |||||| ||||    
T  27903759 tcctatgaagcacggacacttctcggattaggcatgatccagtgtcagacacgcgtcg 27903702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 1389956 - 1389908
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacac 312  Q
    |||||||||| |||||| ||  |||||||||||||| ||||||||||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggacac 1389908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 3865732 - 3865692
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||| |||||||||||||| |||||    
T  3865732 gacaccgacacttgtaattatactgaattatgtgagttttt 3865692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 7928508 - 7928468
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||| | || ||||||||||||||||||||||||    
T  7928508 gacaccgacacatataattacactgaattatgtgatttttt 7928468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 21479176 - 21479136
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||| ||| |||||||||||| |||||||||||    
T  21479176 gacaccgacactagtaattacactgaattgtgtgatttttt 21479136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 7e-31; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 39698671 - 39698559
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| |||||||| |||| |||||||||| || ||||||||| |||||||||| ||||| |||||||||| |||||||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaat 39698572  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  39698571 tatgtgatttttt 39698559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 7677835 - 7677723
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| ||| || ||| |||||||| ||||||||||||||||| ||| |||||| |||||||||| ||||||||||||| || || ||||||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaat 7677736  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  7677735 tatgtgatttttt 7677723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 21522857 - 21522768
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||    
T  21522857 gattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttatttttt 21522768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 21533423 - 21533334
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||| |||||||    
T  21533423 gattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttatttttt 21533334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 367
Target Start/End: Complemental strand, 21542137 - 21542056
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgt 367  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  21542137 gattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgt 21542056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 267 - 375
Target Start/End: Complemental strand, 30183675 - 30183567
Alignment:
Q  267 gaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatg 366  Q
    ||||||||||||||||||  ||||||| |||||| |||||||||||||||||||||||| ||| ||| |||||||||||||||| ||| || |||| |||    
T  30183675 gaagcacagacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatg 30183576  T
Q  367 tgatttttt 375  Q
    |||| ||||    
T  30183575 tgatatttt 30183567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 31084447 - 31084341
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||| ||| |||||| ||| ||||||||||||||| ||||||||||||||||||||      |||||| |||| ||||||||||| ||||| |||||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgt------ccgacacgacatcgacacttgtaattacattgaat 31084354  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  31084353 tatgtgatttttt 31084341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 367
Target Start/End: Original strand, 36642691 - 36642795
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||| ||||||| |||||| |||  ||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||||||||| || ||||||| ||    
T  36642691 cctacgaagcaccgacactcctccaattaggcgtgtcccg-tgtcggacacgtgtcgtgtccgacaccaacatgacaccgacacttatatttacactaaa 36642789  T
Q  362 ttatgt 367  Q
     |||||    
T  36642790 atatgt 36642795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 43565001 - 43564930
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||| |||||||||| |||||||| |||||||| ||||||||| ||||||||| ||||||||||    
T  43565001 cctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgaca 43564930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 373
Target Start/End: Complemental strand, 19579818 - 19579721
Alignment:
Q  276 acacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    ||||| ||| |||||||| |||||||||||  ||||  ||||||||| ||||| |||| |||||||||||||||| || |||| ||||||||||||||    
T  19579818 acactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgatttt 19579721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 21351889 - 21351946
Alignment:
Q  318 gtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  21351889 gtgtcggacaccgacatgacaccgacacttgtaattacactgaattatgtgacttttt 21351946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 37328774 - 37328884
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||| ||||| || | ||||||| |||||| | |  |||||| |||||||||| ||||||||||| |||| ||||||||||    
T  37328774 cctatgaagcacggacactcctcggattaagcgtatcccggtatcggacgcat--cgtgtccgacaccgacacgacaccgacacatgtaattacactgaa 37328871  T
Q  362 ttatgtgattttt 374  Q
    || ||||||||||    
T  37328872 ttttgtgattttt 37328884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 375
Target Start/End: Complemental strand, 15382592 - 15382497
Alignment:
Q  275 gacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    |||||| ||| |||||||| ||||||||||||||||| ||||||||||  |||||     |||||||||||||||| ||| |||||||||| ||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacacc-----gacaccgacacttgtaattatactgaattatatgattttt 15382498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 42893479 - 42893409
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||  |||||| |||| ||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  42893479 ctatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacacgtgttgtgtctgacaccgaca 42893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 373
Target Start/End: Complemental strand, 3966632 - 3966523
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||| |||||| ||| |||||| | ||||||  ||| |||||| ||| ||||| ||||| |||| ||||||||||| | || ||||||||||||    
T  3966632 tatgaagcacggacactcctcggattagacgtgtccctctgttggacacatgttgtgtccgacactgacacgacaccgacacatataattacactgaatt 3966533  T
Q  364 atgtgatttt 373  Q
     |||||||||    
T  3966532 gtgtgatttt 3966523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 373
Target Start/End: Complemental strand, 6401627 - 6401518
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||| |||||| ||  ||| |||| | |||| ||||| ||||||||||||||| ||||| |||| ||||||||||| | || |||||||| |||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtatt 6401528  T
Q  364 atgtgatttt 373  Q
     |||||||||    
T  6401527 ttgtgatttt 6401518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 330 - 375
Target Start/End: Original strand, 13287395 - 13287440
Alignment:
Q  330 gacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgatttttt 13287440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 373
Target Start/End: Complemental strand, 14873643 - 14873537
Alignment:
Q  261 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactga 360  Q
    ||||||||||||| |||||| ||| |||||||| ||||||||||| |||||||||| | ||      |||||||||||||||||| | || ||||||| |    
T  14873643 tcctatgaagcacggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgt------ccgacatgacaccgacacatataattacactaa 14873550  T
Q  361 attatgtgatttt 373  Q
    |||||||| ||||    
T  14873549 attatgtgctttt 14873537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 21576685 - 21576786
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| |||||||| |||||| ||||| ||||||||||||||      |||||||     ||||||||||| |||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgt------ccgacat-----cgacacttgtaattacactgaat 21576773  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  21576774 tatgtgatttttt 21576786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 265 - 375
Target Start/End: Original strand, 21190998 - 21191097
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||||||| |||||| ||| |||||||| |||||||| ||||||||||||| ||||| ||||           |||||||||||| |||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgaca-----------ccgacacttgtaattacactgaatta 21191086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 373
Target Start/End: Complemental strand, 21814364 - 21814281
Alignment:
Q  290 aggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||| |||||| ||| | ||||||||||||||| |||||||||| ||||||||||| | || |||||||| ||| |||||||||    
T  21814364 aggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgcattttgtgatttt 21814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 373
Target Start/End: Complemental strand, 30098456 - 30098346
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||| | ||| |||||||  ||||| |||||| ||||||||||||||| ||||| |||  || |||||||  | || ||||| |||||    
T  30098456 ctatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacacgtgtcgtgtccgacactgactcgataccgacatctataattacattgaat 30098357  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  30098356 tatgtgatttt 30098346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 32766872 - 32766982
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| |||||||||| | | ||| ||||||||||||||||||| |  |||||||||| |||||  |||| | || ||||| |||||    
T  32766872 ctatgaagcacggacactcctcagattagacgtatcctggtgtcggacacgtgtcgttttcgacaccgacacgacacaaacacatataattacattgaat 32766971  T
Q  363 tatgtgatttt 373  Q
    | || ||||||    
T  32766972 tgtgcgatttt 32766982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 265 - 375
Target Start/End: Complemental strand, 43001922 - 43001818
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||||||| |||||| ||| |||||||| ||||| |||||  ||||||||||||||| |||    ||||  |||| ||||||||| |||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgac----acat--caccaacacttgtaattacactgaatta 43001829  T
Q  365 tgtgatttttt 375  Q
    ||| |||||||    
T  43001828 tgtaatttttt 43001818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 6247680 - 6247640
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  6247680 gacaccgacacttgtaattacactgaattatgtgatttttt 6247640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 15884046 - 15884006
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  15884046 gacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 275 - 375
Target Start/End: Complemental strand, 17088398 - 17088303
Alignment:
Q  275 gacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    |||||| ||| |||||||| |||||||||||||||||     |||| | |||||||||| ||||  |||||||||| | ||||| |||||||||||||||    
T  17088398 gacactcctcggattaggcgtgtcccggtgtcggaca-----cgtgaccgacaccgacacgacagtgacacttgtaatcacactaaattatgtgattttt 17088304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 27932356 - 27932288
Alignment:
Q  261 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 329  Q
    |||||||||||||| ||||| |||  ||||||| ||||| |||||| ||||||||||||||| ||||||    
T  27932356 tcctatgaagcacaaacactcctcgaattaggcgtgtcctggtgtccgacacgtgtcgtgtccgacacc 27932288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 30502351 - 30502398
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  30502351 gattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgaca 30502398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 30542694 - 30542741
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  30542694 gattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgaca 30542741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 333
Target Start/End: Original strand, 39268541 - 39268608
Alignment:
Q  266 tgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||| |||||| ||| |||||||| |||||| ||||||||||| |||||||||  |||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatgtcgtgtccaacaccgaca 39268608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 375
Target Start/End: Complemental strand, 12641765 - 12641692
Alignment:
Q  302 gtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||| |||||||| |||||||||||| ||| ||||| ||||| || | ||| ||| ||||||||||||||||    
T  12641765 gtgtcgaacacgtgttgtgtctgacaccaacacgacactgacacgtgcaattatactaaattatgtgatttttt 12641692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 330 - 375
Target Start/End: Complemental strand, 30135377 - 30135332
Alignment:
Q  330 gacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||    
T  30135377 gacatgacaccgacacttgtaattacaatgagttatgtgatttttt 30135332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 311
Target Start/End: Original strand, 38464312 - 38464361
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggaca 311  Q
    ||||||||||||||||||| ||| |||||||  |||||||||||||||||    
T  38464312 cctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 366
Target Start/End: Complemental strand, 11686069 - 11685966
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||| |||||| | || |  ||| | |||||||||||||||| |||||||| | ||||||||||| | || ||||||| ||    
T  11686069 cctatgaagcacggacactcctccgattagccgtgccttggttttggacacgtgtcgtgtccgacaccga-acgacaccgacacatataattacactaaa 11685971  T
Q  362 ttatg 366  Q
    |||||    
T  11685970 ttatg 11685966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 19820328 - 19820376
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggaca 311  Q
    ||||||||||| |||||| ||| |||||||| |||||||||||||||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 33178083 - 33178043
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  33178083 gacaccgacacttgtaattacactaaattatgtgatttttt 33178043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 17123166 - 17123096
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacat 334  Q
    ||||||||||| |||||| ||| |||||||| |||||| |||||||||| || |||||||  ||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgtccc-gtgtcggacatgtttcgtgtccaacaccgacat 17123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 21319927 - 21319986
Alignment:
Q  316 tcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||| ||||||||||||||| ||||||||||  ||||| |||||||| | |||||||    
T  21319927 tcgtgtccgacaccgacatgacatcgacacttgtgattacattgaattatatcatttttt 21319986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 7218271 - 7218305
Alignment:
Q  338 accgacacttgtagttacactgaattatgtgattt 372  Q
    ||||||||||||| |||||||||||||||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgattt 7218305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 339
Target Start/End: Complemental strand, 15588707 - 15588632
Alignment:
Q  269 agcacagacacttctcagattaggcatgtccc---ggtgtcggacacgtgtcgtgtc--tgacaccgacatgacac 339  Q
    |||||| | |||||||||||||||| ||||||   ||||||||| |||| |||||||  |||||||||||||||||    
T  15588707 agcacatatacttctcagattaggcgtgtcccggtggtgtcggatacgtatcgtgtctttgacaccgacatgacac 15588632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 375
Target Start/End: Complemental strand, 40131753 - 40131639
Alignment:
Q  261 tcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactga 360  Q
    ||||||||| ||| |||||| ||  || ||| | ||||||  |||| |||||  ||||||||||||| ||| | |||||||| | || || ||| |||||    
T  40131753 tcctatgaaacacggacactccttggagtagacgtgtcccaatgtcagacacaagtcgtgtctgacatcgatacgacaccgatatttataattaaactga 40131654  T
Q  361 attatgtgatttttt 375  Q
    |||||||||||||||    
T  40131653 attatgtgatttttt 40131639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 41091186 - 41091296
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    |||||||||||  ||||| |||||||||| | || |  |||||  ||||| ||||| ||| ||||  |||| |||| |||||| | || |||||||||||    
T  41091186 ctatgaagcacgaacactcctcagattagacgtgccttggtgttagacacatgtcgcgtccgacattgacacgacatcgacacatataattacactgaat 41091285  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  41091286 tatgtgatttt 41091296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 12199997 - 12199948
Alignment:
Q  326 caccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||| ||| |||||||||||||||| ||  ||||||||||||||||||||    
T  12199997 caccaacacgacaccgacacttgtaattgtactgaattatgtgatttttt 12199948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 19552530 - 19552584
Alignment:
Q  319 tgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||||| |||| |||||||| ||  |||||| ||||||||||||||||    
T  19552530 tgtctgacaccgacacgacatcgacacttata--tacacttaattatgtgatttttt 19552584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 24238603 - 24238660
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtc 322  Q
    ||||||||| |||||| ||  ||||| ||||||||| |||| ||||||||||||||||    
T  24238603 atgaagcacggacactcctaggattatgcatgtcccagtgttggacacgtgtcgtgtc 24238660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 375
Target Start/End: Original strand, 24906305 - 24906342
Alignment:
Q  338 accgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  24906305 accgacacttgtaattacactgaattatgtcatttttt 24906342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 8420085 - 8420045
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||| |||||||||| |||||||    
T  8420085 gacaccgacacttgtaattacattgaattatgttatttttt 8420045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 375
Target Start/End: Complemental strand, 14674323 - 14674287
Alignment:
Q  339 ccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgatttttt 14674287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 35017162 - 35017110
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtg 315  Q
    ||||||||||| |||||| ||| |||||||| ||||||| ||| |||||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgtcccgatgttggacacgtg 35017110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 263 - 373
Target Start/End: Original strand, 44454 - 44564
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||  ||||||||| || |||||||| | || |||||||||||    
T  44454 ctatgaagcacagacacttctcagattaaccatgtcccagtgtcggacacgtgttgtgtccaacaccgacacgataccgacacatataattacactgaat 44553  T
Q  363 tatgtgatttt 373  Q
    |||||||||||    
T  44554 tatgtgatttt 44564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 71856 - 71743
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||| |||||| ||| |||||| | |||||||||||||||||||||| ||||| |||||||||| ||||| |||||| ||| ||||||||||    
T  71856 cctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaa 71757  T
Q  362 ttatgtgatttttt 375  Q
    || |||||||||||    
T  71756 ttgtgtgatttttt 71743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 375
Target Start/End: Original strand, 3777 - 3890
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    |||||||||||  |||||| ||| |||||||| |||| || ||||||||| |||||||||| |||||| ||| ||||| |||||||||| ||||||||||    
T  3777 cctatgaagcaaggacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaa 3876  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  3877 ttatgtgatttttt 3890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 3058 - 2946
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||| ||||| |||||| ||| |||||||| ||| ||||||||| ||||||||||||||||| ||||||| ||||| || ||||||| ||||||| |||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaat 2959  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  2958 tatgtgatttttt 2946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 373
Target Start/End: Complemental strand, 53303 - 53200
Alignment:
Q  270 gcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtga 369  Q
    |||| |||||||||  |||||  | ||||||||||||||||||||||| |||| |||||||||| | ||||||||||| || ||||||||||||||||||    
T  53303 gcacggacacttcttggattaaacgtgtcccggtgtcggacacgtgtcatgtccgacaccgacacggcaccgacacttataattacactgaattatgtga 53204  T
Q  370 tttt 373  Q
    ||||    
T  53203 tttt 53200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 262 - 375
Target Start/End: Complemental strand, 23642 - 23529
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaa 361  Q
    ||||||||||||| ||||||||  ||||| || |||||| || |||||||| | ||||||| |||||||| | ||||| ||||||| || ||||||||||    
T  23642 cctatgaagcacaaacacttctgggattatgcgtgtcccagtctcggacacatatcgtgtccgacaccgaaacgacactgacacttataattacactgaa 23543  T
Q  362 ttatgtgatttttt 375  Q
    ||||||||||||||    
T  23542 ttatgtgatttttt 23529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 328 - 375
Target Start/End: Complemental strand, 23485 - 23438
Alignment:
Q  328 ccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||||    
T  23485 ccgacacgacaccgacacttataattacactgaattatgtgatttttt 23438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 265 - 373
Target Start/End: Original strand, 263303 - 263411
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||| ||| |||||| ||| |||||||| ||||  ||| ||| ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||    
T  263303 atgaaccacggacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaatta 263402  T
Q  365 tgtgatttt 373  Q
    |||| ||||    
T  263403 tgtggtttt 263411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 8564 - 8676
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| |||  ||||||| ||| || ||||||||||||| ||||||| || ||||||| |||||||||| ||||| ||| || ||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaat 8663  T
Q  363 tatgtgatttttt 375  Q
    |||||||| ||||    
T  8664 tatgtgatatttt 8676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 265 - 373
Target Start/End: Original strand, 9678 - 9786
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||||||| |||||| ||| |||||  | ||||||| |||| |||| ||||||||||||||||| ||| ||||||||||| | || |||||||||||||    
T  9678 atgaagcacggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaatta 9777  T
Q  365 tgtgatttt 373  Q
     ||||||||    
T  9778 agtgatttt 9786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 333
Target Start/End: Original strand, 4976 - 5046
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||||||||| ||| ||||||||||||| |  |||||||||||||||||||| ||||||||||    
T  4976 ctatgaagcacagacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccgacaccgaca 5046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 8917 - 8847
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||| || ||| |||||||||||| |||| ||||||||||||||||||||||| ||||||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgaca 8847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 4821 - 4924
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaat 362  Q
    ||||||||||| |||||| ||| |||||||| |||||| |||||||||| |||||||||         ||| |||||| ||||||||| |||||||||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---------acaagacaccaacacttgtaattacactgaat 4911  T
Q  363 tatgtgatttttt 375  Q
    |||||||||||||    
T  4912 tatgtgatttttt 4924  T

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Target: scaffold0655 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 4266 - 4205
Alignment:
Q  201 atgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 262  Q
    |||||||||||||||||||||||||||| | |||||| |||| |||| ||||||||||||||    
T  4266 atgatagaatagaatatttgtcataattggctataattatttccctgtaattatgttgtatc 4205  T

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Target: scaffold0655; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 6321 - 6261
Alignment:
Q  202 tgatagaatagaatatttgtcataattagttataatgattttcctgcaattatgttgtatc 262  Q
    |||||||||||||||||||| |||||| | |||||| |||| |||| ||||||||||||||    
T  6321 tgatagaatagaatatttgtaataattggctataattatttccctgtaattatgttgtatc 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 403 - 472
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||| |||||| ||| |||||||  ||||||||||||||||||| |||||||| ||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgaca 472  T

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Target: scaffold0652; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 463 - 503
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  463 gacaccgacacttgtaattacactgaattttgtgatttttt 503  T

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Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 333
Target Start/End: Complemental strand, 70374 - 70327
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||    
T  70374 gattaggcatgtcctggtgtcggacacgtgtcgtgtccgacaccgaca 70327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 375
Target Start/End: Complemental strand, 20239 - 20190
Alignment:
Q  326 caccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  20239 caccgacacgacactgacacttgtaattacactgaattatgtgatttttt 20190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 23828 - 23788
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  23828 gacaccgacacttgtaattacactgaattatgtgatttttt 23788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 374
Target Start/End: Complemental strand, 19662 - 19594
Alignment:
Q  300 cggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgattttt 374  Q
    |||||||||||||||||||||||  |||||||||| ||||      ||||| |||||||||||||||||||||||    
T  19662 cggtgtcggacacgtgtcgtgtccaacaccgacataacac------ttgtaattacactgaattatgtgattttt 19594  T

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Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 45493 - 45540
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||||||    
T  45493 gattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgaca 45540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 367
Target Start/End: Original strand, 45531 - 45563
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgt 367  Q
    |||||||||||||||| ||||||||||||||||    
T  45531 gacaccgacacttgtaattacactgaattatgt 45563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 14646 - 14580
Alignment:
Q  263 ctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacacc 329  Q
    |||||||||||  ||||| ||  |||||||| |||| ||||||||||||||||||||||| ||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacc 14580  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 337 - 375
Target Start/End: Complemental strand, 130538 - 130500
Alignment:
Q  337 caccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgatttttt 130500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 373
Target Start/End: Original strand, 5926 - 6035
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    ||||| |||| |||||| ||  ||| |||| |||| | ||||| ||||||||||||||  |||||||| | ||||||||||| | || |||||||| |||    
T  5926 tatgaggcacggacactccttggataaggcgtgtctctgtgtcagacacgtgtcgtgttcgacaccgatacgacaccgacacatataattacactgcatt 6025  T
Q  364 atgtgatttt 373  Q
     |||||||||    
T  6026 ttgtgatttt 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 350
Target Start/End: Complemental strand, 13549 - 13456
Alignment:
Q  257 tgtatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgta 350  Q
    ||||| |||||||| || |||||| ||| |||||||  | ||||| ||||| | |||||||||||| |||||||||| ||| ||||||| ||||    
T  13549 tgtatgctatgaagtacggacactcctcggattaggtgtatcccgatgtcgtatacgtgtcgtgtccgacaccgacacgaccccgacacatgta 13456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 373
Target Start/End: Complemental strand, 8795 - 8686
Alignment:
Q  264 tatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatt 363  Q
    |||||||||  |||||||||| ||| |||| ||||   || |||||||||| ||  ||||||||  |||| ||||||||||||| || ||| |||||| |    
T  8795 tatgaagcatggacacttctcggataaggcgtgtcttagtatcggacacgtatcacgtctgacatagacacgacaccgacacttataattatactgaact 8696  T
Q  364 atgtgatttt 373  Q
    ||||||||||    
T  8695 atgtgatttt 8686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 373
Target Start/End: Complemental strand, 13523 - 13420
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||||||| |||||| ||  |||||||  |||||  ||||| ||| ||||||||||| ||||||||||     ||||| |||||| || ||||||||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgaca-----ccgacccttgtaattgcactgaatta 13429  T
Q  365 tgtgatttt 373  Q
    |||||||||    
T  13428 tgtgatttt 13420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 373
Target Start/End: Original strand, 21804 - 21907
Alignment:
Q  265 atgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaatta 364  Q
    ||||||||| |||||| ||  |||||||  |||||  ||||| ||| ||||||||||| ||||||||||     ||||| |||||| || ||||||||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgaca-----ccgacccttgtaattgcactgaatta 21898  T
Q  365 tgtgatttt 373  Q
    |||||||||    
T  21899 tgtgatttt 21907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 375
Target Start/End: Complemental strand, 51890 - 51829
Alignment:
Q  306 cggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    ||||||||| ||||||||||||||||||        ||||||||| ||||||||||||||||||||||||    
T  51890 cggacacgtatcgtgtctgacaccgaca--------acacttgtaattacactgaattatgtgatttttt 51829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 46740 - 46700
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  46740 gacaccgacatttgtaattacactgaattatgtgatttttt 46700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 17750 - 17790
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgatttttt 17790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 371
Target Start/End: Complemental strand, 123686 - 123650
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatt 371  Q
    |||||||||||||||| ||||||||||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgatt 123650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 375
Target Start/End: Complemental strand, 83218 - 83178
Alignment:
Q  335 gacaccgacacttgtagttacactgaattatgtgatttttt 375  Q
    |||||||||| ||||| |||||||||||||||| |||||||    
T  83218 gacaccgacatttgtaattacactgaattatgtcatttttt 83178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 8721 - 8662
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgt 321  Q
    |||||||||||| |||||| ||  |||||||| | |||| ||||||||||||||||||||    
T  8721 cctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgt 8662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 24156 - 24044
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtcccggtgtcgg--acacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactg 359  Q
    |||||||||||| ||||||  || |||||||| ||| || |||||||  |||||||| ||||| |||||||||| ||||| || || |||| |||||||     
T  24156 cctatgaagcacggacactcatcggattaggcgtgt-ccagtgtcggacacacgtgttgtgtccgacaccgacacgacactgaaac-tgtaattacacta 24059  T
Q  360 aattatgtgattttt 374  Q
    ||||||| |||||||    
T  24058 aattatgagattttt 24044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 373
Target Start/End: Original strand, 84925 - 85012
Alignment:
Q  286 gattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgacatgacaccgacacttgtagttacactgaattatgtgatttt 373  Q
    |||||||| ||||| | |||||||||||||| ||||  |||| ||||||||||||||||  | || ||||||  |||||| |||||||    
T  84925 gattaggcgtgtcctgttgtcggacacgtgttgtgttcgacatcgacatgacaccgacatatataattacacataattatatgatttt 85012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 329 - 375
Target Start/End: Original strand, 178813 - 178860
Alignment:
Q  329 cgacatgacaccgacacttgtagttacactgaattatg-tgatttttt 375  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  178813 cgacatgacactgacacttgtaattacactgaattatgatgatttttt 178860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 3431 - 3357
Alignment:
Q  259 tatcctatgaagcacagacacttctcagattaggcatgtcccggtgtcggacacgtgtcgtgtctgacaccgaca 333  Q
    ||||||||||||||| |||||| ||| |||||||| |||||| |||||   |||||||| |||| ||||| ||||    
T  3431 tatcctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgaca 3357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 21408 - 21372
Alignment:
Q  262 cctatgaagcacagacacttctcagattaggcatgtc 298  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  21408 cctatgaagcacagacacttctcggattaggcgtgtc 21372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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