View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7800_low_18 (Length: 322)

Name: NF7800_low_18
Description: NF7800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7800_low_18
NF7800_low_18
[»] chr8 (26 HSPs)
chr8 (18-313)||(33977132-33977427)
chr8 (67-314)||(33961864-33962109)
chr8 (21-321)||(24092034-24092335)
chr8 (21-314)||(13660162-13660454)
chr8 (21-314)||(13718805-13719097)
chr8 (19-286)||(45136190-45136455)
chr8 (18-314)||(27925242-27925531)
chr8 (18-169)||(11221205-11221357)
chr8 (18-300)||(9996573-9996853)
chr8 (19-158)||(22476305-22476446)
chr8 (19-287)||(23541224-23541495)
chr8 (19-158)||(22485208-22485349)
chr8 (21-214)||(25240482-25240674)
chr8 (19-115)||(8726919-8727015)
chr8 (19-115)||(17880727-17880823)
chr8 (19-115)||(37155513-37155610)
chr8 (19-113)||(17279963-17280057)
chr8 (21-103)||(33466160-33466242)
chr8 (19-116)||(39081040-39081137)
chr8 (27-115)||(1684058-1684146)
chr8 (51-115)||(23864455-23864519)
chr8 (56-118)||(20254860-20254922)
chr8 (24-104)||(12814591-12814672)
chr8 (21-90)||(22874255-22874324)
chr8 (26-118)||(24850417-24850510)
chr8 (51-115)||(23249842-23249906)
[»] chr6 (54 HSPs)
chr6 (18-321)||(17864208-17864510)
chr6 (18-314)||(8465462-8465757)
chr6 (18-190)||(20470115-20470288)
chr6 (16-247)||(25805525-25805757)
chr6 (19-190)||(34657063-34657236)
chr6 (18-314)||(20989554-20989850)
chr6 (23-207)||(20558380-20558565)
chr6 (19-319)||(21723190-21723493)
chr6 (19-159)||(9281651-9281793)
chr6 (19-159)||(17855269-17855411)
chr6 (121-314)||(12039499-12039691)
chr6 (19-288)||(13195398-13195669)
chr6 (18-190)||(29254827-29255001)
chr6 (18-314)||(15897464-15897759)
chr6 (18-300)||(23882502-23882779)
chr6 (19-242)||(14258985-14259212)
chr6 (19-159)||(17527827-17527969)
chr6 (52-288)||(19100008-19100244)
chr6 (18-207)||(25964768-25964959)
chr6 (18-207)||(25969415-25969606)
chr6 (18-207)||(25973855-25974046)
chr6 (19-159)||(33665868-33666010)
chr6 (20-115)||(16309346-16309441)
chr6 (19-288)||(17234666-17234939)
chr6 (23-160)||(19171494-19171633)
chr6 (19-115)||(15003150-15003247)
chr6 (21-118)||(28623605-28623702)
chr6 (18-94)||(12039691-12039767)
chr6 (18-117)||(24501898-24501997)
chr6 (24-118)||(11960562-11960657)
chr6 (24-118)||(26965555-26965650)
chr6 (19-247)||(21706202-21706434)
chr6 (21-118)||(3567407-3567504)
chr6 (19-115)||(19216027-19216124)
chr6 (19-115)||(20003211-20003308)
chr6 (40-104)||(12444721-12444785)
chr6 (19-115)||(15038422-15038518)
chr6 (19-115)||(16137570-16137666)
chr6 (19-159)||(19894565-19894705)
chr6 (19-91)||(9384688-9384761)
chr6 (19-95)||(15007344-15007421)
chr6 (250-314)||(20465685-20465749)
chr6 (250-321)||(29253463-29253535)
chr6 (51-115)||(20764982-20765046)
chr6 (55-115)||(21323262-21323322)
chr6 (74-115)||(18152694-18152735)
chr6 (24-104)||(30425014-30425095)
chr6 (173-295)||(28623754-28623875)
chr6 (19-70)||(32449325-32449376)
chr6 (171-322)||(21323058-21323209)
chr6 (107-159)||(13870343-13870396)
chr6 (173-226)||(17869792-17869844)
chr6 (173-226)||(17879544-17879596)
chr6 (50-90)||(24561560-24561600)
[»] scaffold0226 (3 HSPs)
scaffold0226 (18-314)||(7329-7625)
scaffold0226 (18-314)||(17916-18211)
scaffold0226 (18-314)||(27310-27605)
[»] chr1 (25 HSPs)
chr1 (18-313)||(11667651-11667947)
chr1 (69-314)||(24986125-24986368)
chr1 (18-296)||(20841070-20841349)
chr1 (18-300)||(12753135-12753415)
chr1 (18-300)||(17851180-17851457)
chr1 (18-314)||(23477723-23478019)
chr1 (19-206)||(4246110-4246300)
chr1 (19-159)||(26972342-26972484)
chr1 (18-164)||(1973387-1973532)
chr1 (19-159)||(14745725-14745866)
chr1 (19-207)||(13165469-13165659)
chr1 (18-118)||(47941324-47941424)
chr1 (50-268)||(15803946-15804164)
chr1 (20-104)||(17038322-17038406)
chr1 (19-115)||(40313211-40313307)
chr1 (19-115)||(45599317-45599413)
chr1 (52-118)||(10340142-10340208)
chr1 (24-115)||(17379610-17379702)
chr1 (21-113)||(17012079-17012172)
chr1 (19-103)||(33062460-33062545)
chr1 (24-104)||(51472091-51472172)
chr1 (24-115)||(8281999-8282091)
chr1 (24-115)||(17355818-17355910)
chr1 (19-115)||(52436807-52436904)
chr1 (53-115)||(18390092-18390154)
[»] chr7 (60 HSPs)
chr7 (18-314)||(29545927-29546222)
chr7 (21-314)||(15506344-15506637)
chr7 (18-314)||(20991616-20991911)
chr7 (21-321)||(4458816-4459116)
chr7 (20-321)||(16436850-16437152)
chr7 (21-312)||(16207673-16207963)
chr7 (18-321)||(10279888-10280188)
chr7 (19-285)||(11998954-11999224)
chr7 (18-165)||(42636321-42636468)
chr7 (19-321)||(14165240-14165544)
chr7 (21-248)||(15436125-15436352)
chr7 (21-247)||(12325890-12326117)
chr7 (19-268)||(14926722-14926971)
chr7 (19-268)||(15350188-15350437)
chr7 (19-159)||(11521352-11521494)
chr7 (19-159)||(645208-645350)
chr7 (76-300)||(10660995-10661217)
chr7 (18-299)||(20924913-20925186)
chr7 (20-115)||(9564331-9564426)
chr7 (31-159)||(11588551-11588681)
chr7 (19-109)||(48797612-48797702)
chr7 (19-115)||(3290671-3290768)
chr7 (19-115)||(42782830-42782927)
chr7 (19-115)||(7620155-7620251)
chr7 (19-115)||(11560493-11560589)
chr7 (19-115)||(14975507-14975603)
chr7 (19-115)||(15404983-15405079)
chr7 (19-114)||(30226160-30226256)
chr7 (20-115)||(9566980-9567075)
chr7 (20-115)||(4794574-4794672)
chr7 (24-143)||(7586489-7586609)
chr7 (50-118)||(23956983-23957051)
chr7 (50-118)||(24902211-24902279)
chr7 (29-118)||(13455096-13455186)
chr7 (24-115)||(9894054-9894146)
chr7 (18-66)||(10658457-10658505)
chr7 (254-314)||(15438406-15438466)
chr7 (21-104)||(24814001-24814085)
chr7 (50-118)||(26132900-26132968)
chr7 (23-114)||(14984750-14984841)
chr7 (23-114)||(15414361-15414452)
chr7 (30-115)||(23296588-23296674)
chr7 (24-118)||(10038712-10038807)
chr7 (19-97)||(11628714-11628793)
chr7 (26-115)||(15708252-15708342)
chr7 (26-115)||(23579941-23580031)
chr7 (24-115)||(26195445-26195537)
chr7 (53-115)||(14687476-14687538)
chr7 (51-113)||(23174870-23174932)
chr7 (62-115)||(24049568-24049621)
chr7 (61-113)||(4547800-4547852)
chr7 (51-115)||(10251547-10251611)
chr7 (62-114)||(11406938-11406990)
chr7 (59-115)||(19353245-19353301)
chr7 (171-226)||(26132803-26132857)
chr7 (76-115)||(31269044-31269083)
chr7 (53-115)||(20588695-20588757)
chr7 (74-115)||(7508564-7508605)
chr7 (21-113)||(10309480-10309572)
chr7 (74-115)||(23057336-23057377)
[»] chr5 (34 HSPs)
chr5 (18-313)||(26036884-26037181)
chr5 (18-321)||(30605474-30605776)
chr5 (18-321)||(26328996-26329299)
chr5 (18-321)||(23623951-23624255)
chr5 (19-159)||(22404704-22404846)
chr5 (19-160)||(23420503-23420646)
chr5 (19-159)||(22246294-22246436)
chr5 (19-159)||(24189937-24190079)
chr5 (19-321)||(18221185-18221487)
chr5 (73-247)||(9422371-9422547)
chr5 (18-322)||(13338665-13338966)
chr5 (20-115)||(20740925-20741020)
chr5 (23-156)||(20845740-20845875)
chr5 (19-159)||(22251984-22252126)
chr5 (21-118)||(13734958-13735056)
chr5 (19-115)||(20498141-20498238)
chr5 (21-118)||(22184583-22184680)
chr5 (19-115)||(7897903-7897999)
chr5 (24-118)||(20714721-20714816)
chr5 (24-118)||(13941982-13942077)
chr5 (21-104)||(17920783-17920866)
chr5 (19-115)||(26183222-26183319)
chr5 (176-297)||(22184409-22184528)
chr5 (50-115)||(9522636-9522705)
chr5 (228-314)||(23758047-23758132)
chr5 (228-314)||(23823503-23823588)
chr5 (53-115)||(17661399-17661461)
chr5 (20-61)||(22130877-22130918)
chr5 (217-321)||(22082471-22082575)
chr5 (51-97)||(11756211-11756257)
chr5 (19-72)||(25105451-25105505)
chr5 (19-72)||(25164544-25164598)
chr5 (65-115)||(22979867-22979917)
chr5 (51-115)||(24117702-24117766)
[»] chr4 (35 HSPs)
chr4 (18-314)||(15162275-15162573)
chr4 (18-314)||(10724333-10724630)
chr4 (18-314)||(10938102-10938399)
chr4 (21-233)||(10722060-10722271)
chr4 (21-233)||(10935829-10936040)
chr4 (21-207)||(21478184-21478370)
chr4 (18-190)||(33746037-33746208)
chr4 (22-165)||(9069023-9069166)
chr4 (19-159)||(25116900-25117042)
chr4 (21-165)||(8163862-8164006)
chr4 (19-159)||(33898931-33899073)
chr4 (18-300)||(19183488-19183766)
chr4 (23-159)||(18618059-18618197)
chr4 (19-207)||(28019379-28019568)
chr4 (19-119)||(23400178-23400279)
chr4 (23-115)||(25354624-25354716)
chr4 (18-190)||(15700222-15700396)
chr4 (21-143)||(13399264-13399386)
chr4 (19-159)||(10190961-10191103)
chr4 (21-296)||(19659515-19659788)
chr4 (19-115)||(23541318-23541414)
chr4 (19-159)||(16383965-16384107)
chr4 (24-115)||(10198239-10198331)
chr4 (19-115)||(19894792-19894888)
chr4 (19-115)||(24143209-24143305)
chr4 (19-90)||(46741763-46741834)
chr4 (19-97)||(11905168-11905246)
chr4 (24-104)||(32861727-32861808)
chr4 (26-104)||(50907932-50908011)
chr4 (19-115)||(11325133-11325230)
chr4 (19-115)||(22555044-22555142)
chr4 (24-115)||(16655327-16655419)
chr4 (76-300)||(15622573-15622789)
chr4 (270-321)||(15700117-15700168)
chr4 (56-112)||(2679957-2680013)
[»] chr3 (40 HSPs)
chr3 (18-314)||(18063998-18064290)
chr3 (18-286)||(18034715-18034980)
chr3 (18-321)||(28051210-28051515)
chr3 (19-285)||(44452555-44452825)
chr3 (18-300)||(17042558-17042838)
chr3 (21-233)||(18477006-18477217)
chr3 (18-321)||(295534-295829)
chr3 (21-233)||(11656098-11656311)
chr3 (19-159)||(23954499-23954641)
chr3 (18-314)||(19633960-19634249)
chr3 (19-159)||(13790754-13790896)
chr3 (21-199)||(20748067-20748246)
chr3 (18-118)||(6580851-6580951)
chr3 (74-314)||(13515386-13515624)
chr3 (19-159)||(17702481-17702623)
chr3 (19-115)||(9036782-9036878)
chr3 (20-115)||(13913866-13913961)
chr3 (30-159)||(18483313-18483444)
chr3 (20-104)||(7495927-7496011)
chr3 (19-160)||(8224914-8225053)
chr3 (30-300)||(21718735-21718998)
chr3 (19-159)||(24195598-24195740)
chr3 (20-115)||(13917918-13918013)
chr3 (19-207)||(18547723-18547913)
chr3 (24-300)||(286703-286971)
chr3 (19-159)||(15635815-15635957)
chr3 (19-115)||(8749114-8749210)
chr3 (20-104)||(7479136-7479220)
chr3 (19-115)||(9031369-9031465)
chr3 (20-97)||(12054454-12054531)
chr3 (19-159)||(1919185-1919320)
chr3 (18-118)||(21253977-21254078)
chr3 (51-115)||(215333-215397)
chr3 (50-118)||(21094686-21094755)
chr3 (50-118)||(15686143-15686211)
chr3 (24-115)||(31649768-31649860)
chr3 (121-300)||(6579353-6579530)
chr3 (18-77)||(13524707-13524766)
chr3 (76-115)||(11558311-11558350)
chr3 (76-115)||(11567580-11567619)
[»] scaffold0003 (1 HSPs)
scaffold0003 (20-321)||(26480-26782)
[»] scaffold0008 (1 HSPs)
scaffold0008 (21-233)||(40411-40624)
[»] scaffold0259 (1 HSPs)
scaffold0259 (18-293)||(17087-17363)
[»] chr2 (21 HSPs)
chr2 (21-207)||(36398690-36398877)
chr2 (19-190)||(26860208-26860381)
chr2 (18-300)||(19466330-19466608)
chr2 (19-159)||(23758700-23758842)
chr2 (19-207)||(22610967-22611156)
chr2 (23-159)||(24790101-24790239)
chr2 (19-159)||(12910564-12910706)
chr2 (19-115)||(29566086-29566182)
chr2 (18-300)||(21530459-21530736)
chr2 (24-115)||(27107589-27107681)
chr2 (50-296)||(21250016-21250251)
chr2 (21-115)||(13314954-13315048)
chr2 (171-322)||(19444828-19444979)
chr2 (24-115)||(27111158-27111250)
chr2 (24-104)||(24317188-24317269)
chr2 (24-115)||(20475264-20475356)
chr2 (53-113)||(20649547-20649607)
chr2 (19-113)||(18765750-18765845)
chr2 (24-115)||(20476565-20476657)
chr2 (24-115)||(24317798-24317890)
chr2 (24-115)||(31587554-31587646)
[»] scaffold0190 (1 HSPs)
scaffold0190 (28-311)||(16414-16700)
[»] scaffold0338 (1 HSPs)
scaffold0338 (21-207)||(16111-16296)
[»] scaffold0102 (1 HSPs)
scaffold0102 (19-159)||(37080-37222)
[»] scaffold0059 (2 HSPs)
scaffold0059 (19-151)||(61424-61558)
scaffold0059 (74-159)||(48287-48373)
[»] scaffold0037 (1 HSPs)
scaffold0037 (19-159)||(110199-110341)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-207)||(87810-88000)
[»] scaffold0213 (1 HSPs)
scaffold0213 (220-314)||(8371-8465)
[»] scaffold0103 (1 HSPs)
scaffold0103 (19-159)||(25616-25758)
[»] scaffold0088 (1 HSPs)
scaffold0088 (19-159)||(36667-36808)
[»] scaffold0064 (2 HSPs)
scaffold0064 (18-115)||(52915-53011)
scaffold0064 (32-104)||(45865-45937)
[»] scaffold0032 (1 HSPs)
scaffold0032 (19-104)||(103180-103265)
[»] scaffold0020 (1 HSPs)
scaffold0020 (60-207)||(12405-12553)
[»] scaffold0185 (1 HSPs)
scaffold0185 (19-104)||(2357-2443)
[»] scaffold0143 (1 HSPs)
scaffold0143 (21-103)||(36374-36456)
[»] scaffold0069 (1 HSPs)
scaffold0069 (224-321)||(6186-6284)
[»] scaffold0505 (1 HSPs)
scaffold0505 (24-115)||(10024-10116)
[»] scaffold0035 (1 HSPs)
scaffold0035 (24-118)||(37445-37541)
[»] scaffold0022 (1 HSPs)
scaffold0022 (40-115)||(3216-3291)
[»] scaffold0328 (1 HSPs)
scaffold0328 (19-115)||(16960-17057)
[»] scaffold0480 (1 HSPs)
scaffold0480 (51-233)||(11295-11476)
[»] scaffold0015 (1 HSPs)
scaffold0015 (50-118)||(202500-202568)
[»] scaffold0520 (1 HSPs)
scaffold0520 (51-115)||(5525-5589)
[»] scaffold0423 (1 HSPs)
scaffold0423 (62-115)||(13725-13778)


Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 313
Target Start/End: Original strand, 33977132 - 33977427
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  33977132 tatagctctcagcaaactccttgtttacactaaagacctagaacctacccgtatatacttcaatctaggaactcctagatctgagatatcatctcactat 33977231  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
    |  ||||||||||| | ||||  ||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |    
T  33977232 catatggtcagtcagagcccctatgacctatcagacttaaacacaaactcaaggatgaagttaccttcaaacacaacaagtaacaccttgcttacaagct 33977331  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttg 313  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||    
T  33977332 ttggtgtagtacacaagagtatcaaactcaacacacagtcctaaacatgtatcacagacgatacgagaaaggctcacaataaagattctaaacttg 33977427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 67 - 314
Target Start/End: Original strand, 33961864 - 33962109
Alignment:
Q  67 cgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaact 166  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||  ||||| ||| ||||||||| |||| |||| ||||||||||||| ||||||||    
T  33961864 cgtatatacttcaacctaggaactcctagatctgagatcccatctc--tatcttatgttcagtcacagcccctgtgacctatcagacctaagcacaaact 33961961  T
Q  167 caaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatg 266  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  33961962 caaggatgaagttatctttaaacacaacaactaacaccttgcttacaaggtttggtgtagtacacaaaagtatcaaactcaacacacagtcctaaacatg 33962061  T
Q  267 taccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
    || |||||||| ||| ||||||||||||||||||||||||||||||||    
T  33962062 tatcacagacgatacgagaaaggctcacaataaaggttctaaacttgc 33962109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 21 - 321
Target Start/End: Original strand, 24092034 - 24092335
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctc 120  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||  ||||||||||||      
T  24092034 agctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcactatcct 24092133  T
Q  121 atggtcagtcacaaccccagtgaactatcagacctaaacacaaactc-aaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggttt 219  Q
    || |||||||||| |||| | || |||||||||   |||||| |||| || | |||||||||||||||||| |||||||| ||||||||||||||| |||    
T  24092134 atagtcagtcacagcccctgcgagctatcagactagaacacagactcaaacggtgaagttaccttcaaaca-aacaactagcaccttgcttacaagcttt 24092232  T
Q  220 ggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgcttca 318  Q
    |||||||||| ||||||| |  ||||||| ||||| ||||||||||||| || | ||| ||||||||||||||||||| |||||| |||||| ||| |||    
T  24092233 ggtgtagtactcaagagtttacaactcaacacacaatcctaaacatgtatcaaaaacgatacaagaaaggctcacaataaaaggtactaaacctgcatca 24092332  T
Q  319 aca 321  Q
    |||    
T  24092333 aca 24092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 314
Target Start/End: Complemental strand, 13660454 - 13660162
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat-ct 119  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||  ||||||||| | ||    
T  13660454 agctctcagcaaactcctcgtttactctaaagacctgggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactctcct 13660355  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaaggtt 218  Q
     |||||| |||| | |||  |||| |||||||||||||||||||||||||   |||| ||| ||||||||| |||||||||||||||| || ||||  ||    
T  13660354 aatggtcggtcatagcccatgtgacctatcagacctaaacacaaactcaacagtgaaattatcttcaaaca-aacaactaacaccttgtttcacaa-ctt 13660257  T
Q  219 tggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
     |||||||||||||| |||||||||||| | | ||||| ||||||| ||| |||| | | ||||||||||  ||||||||||||||||||||||||    
T  13660256 cggtgtagtacacaaaagtatcaaactc-acatacagttctaaacaagtatcacatatgatacaagaaagtatcacaataaaggttctaaacttgc 13660162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 314
Target Start/End: Complemental strand, 13719097 - 13718805
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat-ct 119  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||  ||||||||| | ||    
T  13719097 agctctcagcaaactcctcgtttactctaaagacctgggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactctcct 13718998  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaaggtt 218  Q
     |||||| |||| | |||  |||| |||||||||||||||||||||||||   |||| ||| ||||||||| |||||||||||||||| || ||||  ||    
T  13718997 aatggtcggtcatagcccatgtgacctatcagacctaaacacaaactcaacagtgaaattatcttcaaaca-aacaactaacaccttgtttcacaa-ctt 13718900  T
Q  219 tggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
     |||||||||||||| |||||||||||| | | ||||| ||||||| ||| |||| | | ||||||||||  ||||||||||||||||||||||||    
T  13718899 cggtgtagtacacaaaagtatcaaactc-acatacagttctaaacaagtatcacatatgatacaagaaagtatcacaataaaggttctaaacttgc 13718805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 19 - 286
Target Start/End: Original strand, 45136190 - 45136455
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat- 117  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||     
T  45136190 atagctctcagcaaactcctcatttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatatgagatcccatctcactatc 45136289  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaag 215  Q
    || ||||||||||||| |||| |||| || ||||||||||  |||||||||| |  |||||||||||||||||  |||||||||||||||| || ||||     
T  45136290 ctaatggtcagtcacagcccctgtgacctctcagacctaa--acaaactcaaagtagaagttaccttcaaacacaaacaactaacaccttgtttcacaa- 45136386  T
Q  216 gtttggtgtagtacacaagagtatcaa-actcaagacacagtcctaaacatgtaccacagacggtacaagaa 286  Q
     || ||||||||||||||||||||||| ||||   ||||||||||||||| ||| |||| ||| ||||||||    
T  45136387 cttcggtgtagtacacaagagtatcaatactc---acacagtcctaaacaagtatcacaaacgatacaagaa 45136455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 27925531 - 27925242
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||| ||||||||   ||||||| |||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||  |||||||||||    
T  27925531 tatagctctcaacaaactccacatttacaccaaagacataggacctacccgtatagacttcatcctaggaactcctagatctgagatcccatctcactat 27925432  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaa 214  Q
     || | ||||||||||| |||| |||| ||||||||||| ||||||||      | ||||||||||||||||||  |||||||||||||||| || ||||    
T  27925431 cctaaaggtcagtcacagcccctgtgacctatcagacctgaacacaaa------gttgaagttaccttcaaacacaaacaactaacaccttgtttcacaa 27925338  T
Q  215 ggtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
      ||  ||||||||||||||||||||||||||   ||||||||||||||| ||| |||| ||| ||||||||||| |||||||| |||||||||||||||    
T  27925337 -cttcagtgtagtacacaagagtatcaaactc---acacagtcctaaacaagtatcacaaacgatacaagaaaggatcacaatataggttctaaacttgc 27925242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 11221357 - 11221205
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  11221357 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 11221258  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaa 169  Q
     || ||| |||||||||||||  |||| |||||||||||||||||||||||||    
T  11221257 cctaatgatcagtcacaacccttgtgacctatcagacctaaacacaaactcaa 11221205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 18 - 300
Target Start/End: Original strand, 9996573 - 9996853
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||  | |||||||||||||||||||| | ||||||  |||||||||||    
T  9996573 tatagctctcagcaaactcctcatttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctaggtctgagatcacatctcactat 9996672  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaag-gatgaagttaccttcaaacagaacaactaacaccttgctt-acaag 215  Q
    |  || | ||||||||||||  |||| ||||||||||||||||||||  |||| | |||||||||||||||||| |  | |||||||| ||||| ||||     
T  9996673 cctatagccagtcacaacccatgtgacctatcagacctaaacacaaa--caagcggtgaagttaccttcaaacaaactacctaacaccgtgcttcacaa- 9996769  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaa 300  Q
     |||||||||||  ||| |||| |  ||||||| | | |||||| | |||||| || ||| | ||||||||||||||||||||||    
T  9996770 ctttggtgtagtgtacacgagtttacaactcaacaaatagtccttagcatgtatca-agatgatacaagaaaggctcacaataaa 9996853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 22476305 - 22476446
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | |||||||||||||||| |||| |||||||||||||||||||||||||||||||  |||||||||||    
T  22476305 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccatatagacttcaacctaggaactcctagatttgagatcccatctcactat 22476404  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaa 158  Q
     || ||||||||||||  ||| ||||| ||||||||||||||    
T  22476405 cctaatggtcagtcactgccctagtgacctatcagacctaaa 22476446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 19 - 287
Target Start/End: Complemental strand, 23541495 - 23541224
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaag-acctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||   |||||||||| |  ||||||||||||| |||||| | |||||||||||||||||||||| ||||||   ||||||||||    
T  23541495 atagctctcagcaaactcgccgtttacactatattacctaggacctactcgtatagaattcaacctaggaactcctagatctgagatcctatctcactat 23541396  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacag-aacaactaacaccttgctt-acaa 214  Q
     || |||||||||||||||||| || | |||| | |||| ||||||||| ||| | |||||||||||||||| || ||||||  |||||||| || ||||    
T  23541395 cctaatggtcagtcacaacccctgtaacctattaaacctgaacacaaacacaaagttgaagttaccttcaaatagaaacaacatacaccttgtttcacaa 23541296  T
Q  215 ggtttggtgtagtacacaagagtatcaa-actcaagacacagtcctaaacatgtaccacagacggtacaagaaa 287  Q
      ||||||| |||||||||||||||||| |||| | ||||| ||||||||| ||| |||| ||| |||||||||    
T  23541295 -ctttggtgaagtacacaagagtatcaatactc-acacacaatcctaaacaagtatcacaaacgatacaagaaa 23541224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 22485208 - 22485349
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | |||||||||  || ||||||| ||||||||||| |||||||||||| ||||||  |||||||||||    
T  22485208 atagctctcagcaaactcctcgtttacactatatgacctaggaattatccgtatagacttcaacctaagaactcctagatctgagatcccatctcactat 22485307  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaa 158  Q
     || |||||||||||| |||| ||||| ||||||||||||||    
T  22485308 cctaatggtcagtcactaccctagtgacctatcagacctaaa 22485349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 21 - 214
Target Start/End: Original strand, 25240482 - 25240674
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    ||||||||||||||||||| ||||||||  | |||||||||||||||||| || ||||||||||| |||||||||||| || ||| |||||| |||||||    
T  25240482 agctctcagcaaactccttctttacactttacgacctaggacctacccgtctagacttcaacctaagaactcctagatctgcgatctcatcttactatct 25240581  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgcttacaa 214  Q
     || |||||||||| |||| ||||  ||| ||| ||||| ||||  |||| | ||||||||||||||||||  ||||||||  |||||||||||||    
T  25240582 tatagtcagtcacagcccctgtgacttattaga-ctaaaaacaa--tcaacggtgaagttaccttcaaacacaaacaactacaaccttgcttacaa 25240674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 8726919 - 8727015
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||   ||||||||||| |||||||||||| |||||| ||||||||||    
T  8726919 atagctctcagcaaactcctcgtttgcactaacgacctaggacctacccgtaatgacttcaacctatgaactcctagatctgagatctcatctcact 8727015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 17880823 - 17880727
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| |||||| ||||||||| | |||||||   |||||||||||||||||||||||| |||||| ||||||||||    
T  17880823 atagctctcagcaaactcctcgtttgcactaatgacctaggaacgacccgtactgacttcaacctaggaactcctagatctgagatctcatctcact 17880727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 37155610 - 37155513
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| ||||| | |||||||||||||||||||   ||||||||||||||||||| |||| ||||||  |||||||||    
T  37155610 atagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaactccaagatctgagatcccatctcact 37155513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 17279963 - 17280057
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctca 113  Q
    |||||||| ||||||||||| |||| |||||| |||||||||||||||| ||   ||||||||||||||||| |||||| ||||||  |||||||    
T  17279963 atagctctaagcaaactcctcgtttgcactaatgacctaggacctacccatactgacttcaacctaggaacttctagatctgagatcccatctca 17280057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 33466242 - 33466160
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgaga 103  Q
    ||||||||||||||| || |||| |||||| ||||||||||||||| |||   |||||||||||||||||||||||| |||||    
T  33466242 agctctcagcaaacttctcgtttgcactaatgacctaggacctaccggtactgacttcaacctaggaactcctagatctgaga 33466160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 39081040 - 39081137
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcacta 116  Q
    |||||||||| |||||||||  ||| |||||| ||||||| |||||||||||   ||||||||||||||||| |||||| ||||||  ||||||||||    
T  39081040 atagctctcaacaaactcctcatttgcactaatgacctagaacctacccgtactgacttcaacctaggaactactagatctgagatcccatctcacta 39081137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 1684058 - 1684146
Alignment:
Q  27 cagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||| |||||||||||||||||||| | ||||||| |  ||||||||||| |||||||||| | ||||||  |||||||||    
T  1684058 cagcaaactcctcgtttacactaaagacctaggtcatacccgtcttgacttcaacctaagaactcctagttctgagatcccatctcact 1684146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 23864519 - 23864455
Alignment:
Q  51 agacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||| ||||||  |||||||||    
T  23864519 agacctaggacctacccgttttgacttcaacctaggaactcctagatctgagatcccatctcact 23864455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 118
Target Start/End: Complemental strand, 20254922 - 20254860
Alignment:
Q  56 taggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||| || |||||||||||||||||||||||| ||| ||  ||||||||||||    
T  20254922 taggacctacccgtctagacttcaacctaggaactcctagatctgacatcccatctcactatc 20254860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 12814672 - 12814591
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    ||||||||||||||| ||||||| ||  ||||||||||||||||||| |  || ||||||||| ||||||||||||| ||||    
T  12814672 tctcagcaaactcctcgtttacaactgtagacctaggacctacccgtcttgacgtcaacctagaaactcctagatttaagat 12814591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 22874255 - 22874324
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaact 90  Q
    ||||||||||||||||||  ||| |||||| |||||||||||||||||||   |||||||||| ||||||    
T  22874255 agctctcagcaaactcctcatttgcactaatgacctaggacctacccgtactgacttcaacctgggaact 22874324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 24850510 - 24850417
Alignment:
Q  26 tcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    ||||||||||||| ||||||| ||  |||||||||| |||||| |||  | ||||| |||||||||||||||| | |||| |||||||||||||    
T  24850510 tcagcaaactcctcgtttacaactctagacctaggagctacccatattgatttcaatctaggaactcctagatctaagatctcatctcactatc 24850417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 23249842 - 23249906
Alignment:
Q  51 agacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||| ||| ||||  |||||||||||||||||||||||| ||||||  |||||||||    
T  23249842 agacctaggaccaacctgtattgacttcaacctaggaactcctagatctgagatcccatctcact 23249906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 321
Target Start/End: Complemental strand, 17864510 - 17864208
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  17864510 tatagctctcagcaaactcctcgtttacactaaagtactaggacctacctgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 17864411  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttg-cttacaagg 216  Q
    |  ||||| |||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||  ||||||      
T  17864410 cctatggtaagtcacaacccctgtgacctatcagacctaaacacaaactcaaagatgaagttaccttcaaaca-aacaactcacaccttgttttacaa-c 17864313  T
Q  217 tttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgctt 316  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |    
T  17864312 tttggtgtagtacacaagagtatcaaactcaacacacagtcctaaacatgtatcacagacgatacaagaaaggctcacaataaaggttctaaacttgcat 17864213  T
Q  317 caaca 321  Q
    |||||    
T  17864212 caaca 17864208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 8465757 - 8465462
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||||| || ||||||||||||| ||||||  |||||||||||    
T  8465757 tatagctctcagcaaactccaaatttacactaaagacctaggacctacccgtatagacttcaatcttggaactcctagatctgagatcccatctcactat 8465658  T
Q  118 c-tcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttaca-ag 215  Q
    | | |||||||||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||| ||| || |     
T  8465657 cttaatggtcagtcacaacccctgtgacctatcagacctaaacacaaactcaaaggtgaagttaccttcaaaca-aacaactaacacctt-ctttcacaa 8465560  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
     || |||||||||||||||| |||||||| | | ||||||||||||||| ||| |||||||| ||||||||||  |||||||| |||||||||||||||    
T  8465559 cttcggtgtagtacacaagactatcaaacgc-acacacagtcctaaacaagtatcacagacgatacaagaaagaatcacaatataggttctaaacttgc 8465462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 20470288 - 20470115
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  20470288 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatctcatctcactat 20470189  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca 190  Q
     || ||||||||||||| |||| |||| ||||||||||||||||||||| ||| | |||||||||||| |||||    
T  20470188 cctaatggtcagtcacagcccctgtgacctatcagacctaaacacaaacacaaagttgaagttaccttaaaaca 20470115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 25805525 - 25805757
Alignment:
Q  16 tatatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||  |||||||||    
T  25805525 tatatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcact 25805624  T
Q  116 atctc-atggtcagtcacaaccccagtgaactatcagacctaaacacaaactc-aaggatgaagttaccttcaaaca-gaacaactaacaccttgcttac 212  Q
    ||| | ||||||||||||| |||| |||| |||||||||||  |||||||| | |||| ||||||||||||||||||  |||||||| ||||||| |||     
T  25805625 atcccaatggtcagtcacagcccctgtgacctatcagacct--acacaaacacaaaggttgaagttaccttcaaacacaaacaactagcaccttgtttaa 25805722  T
Q  213 aaggtttggtgtagtacacaagagtatcaaactca 247  Q
     |  || ||||||||||||| ||| ||||||||||    
T  25805723 caacttcggtgtagtacacatgagcatcaaactca 25805757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 34657236 - 34657063
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||| ||||||||| | ||||||||||||||||| |||| |||||||||||||||||||    
T  34657236 atagctctcagcaaactcctcgtttacactatatgacctaggaccaacccgtatagatttcaacctaggaactcccagatctgagatatcatctcactat 34657137  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca 190  Q
     || ||||||||||||| || | |||| ||||||||||||||||||||||||| |  |||||||||||||||||    
T  34657136 cctaatggtcagtcacagccactgtgacctatcagacctaaacacaaactcaaagtagaagttaccttcaaaca 34657063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 20989850 - 20989554
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||| |||||||||| |||||||| ||||| |||| ||||||| |||||||||||  ||||| ||||||||||||    
T  20989850 tatagctctcagcaaactcctcgtttacattaaagacctatgacctacctgtatagacttgaacctagaaactcctagatccgagatctcatctcactat 20989751  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaa 214  Q
     || ||||||| ||||| |||| |||| |||||||||||||  |||||| ||| |  |||||||||||||||||  ||||||||||||| || || ||||    
T  20989750 cctaatggtcaatcacagcccctgtgacctatcagacctaa--acaaacacaaagtagaagttaccttcaaacacaaacaactaacaccctgtttcacaa 20989653  T
Q  215 ggtttggtgtagtacacaagagtatcaa-actca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaactt 312  Q
      || | |||||||||| |||||||||| ||||| | | | ||||||||||| ||| ||| |||| || ||||||||||||||  |||||||||| ||||    
T  20989652 -cttcgatgtagtacacgagagtatcaatactcatacaaatagtcctaaacaagtatcacggacgatataagaaaggctcaca--aaaggttctagactt 20989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 20558380 - 20558565
Alignment:
Q  23 ctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctca 121  Q
    |||||||||||||||| |||||||||  | |||||||||||||||||| || ||||||||||| |||||||||||| |||||| |||||||||||||| |    
T  20558380 ctctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaagaactcctagatatgagatctcatctcactatctta 20558479  T
Q  122 tggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaagga-tgaagttaccttcaaacagaacaactaacaccttg 207  Q
    |||||||||||| |||| |||| ||||||||||||||||||||| |||  | | |||||||||| ||||| |||||||| |||||||    
T  20558480 tggtcagtcacagcccctgtgacctatcagacctaaacacaaacacaaaaattaaagttaccttgaaaca-aacaactagcaccttg 20558565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 319
Target Start/End: Complemental strand, 21723493 - 21723190
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | |||||||||||||||||| || | |||||||||||||||||||||| ||||||  |||||||||||    
T  21723493 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtctagatttcaacctaggaactcctagatctgagatcccatctcactat 21723394  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaa 214  Q
     ||  |||||||||||| ||   |||| |||||| ||||||||  ||||  ||| | |||||||||||| ||||  |||||||||||||||| || ||||    
T  21723393 cctactggtcagtcacagcctttgtgacctatcaaacctaaaccaaaacaaaagta-gaagttaccttccaacacaaacaactaacaccttgtttcacaa 21723295  T
Q  215 ggtttggtgtagtacacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttg 313  Q
       | |||||||| ||||| ||||||||||||| | | ||||||||||||| ||| ||||| || |||||||||||| |||| ||||| |||||||| ||    
T  21723294 -cctcggtgtagtgcacaaaagtatcaaactcacacaaacagtcctaaacaagtatcacagccgatacaagaaaggcacacagtaaagattctaaacctg 21723196  T
Q  314 cttcaa 319  Q
    | ||||    
T  21723195 catcaa 21723190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 9281793 - 9281651
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | |||||| |||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  9281793 atagctctcagcaaactcctcgtttacactatatgacctaagacctacccgtatagacttcaacctaggaactcctagatttgagatcccatctcactat 9281694  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||||||||||||  ||||||||| |||||||||||||||    
T  9281693 cctaatggtcagtcactgccccagtgacctatcagacctaaac 9281651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 17855269 - 17855411
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||    
T  17855269 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatctcatctcactat 17855368  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||||||||||||| || | |||| |||||||||||||||    
T  17855369 cctaatggtcagtcacagccgctgtgacctatcagacctaaac 17855411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 121 - 314
Target Start/End: Complemental strand, 12039691 - 12039499
Alignment:
Q  121 atggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaaggttt 219  Q
    ||||||||||||| |||  |||| ||||||||||||||||||||||||| | ||||| ||||||||| || |||||||||||||||| || ||||  ||     
T  12039691 atggtcagtcacagcccttgtgacctatcagacctaaacacaaactcaaagttgaagctaccttcaaccaaaacaactaacaccttgtttcacaa-cttc 12039593  T
Q  220 ggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
     |||||||||||||||||||||||||| | ||||||||||||||| ||| |||| ||  ||||||||||| |||||| | |||||||||||||||    
T  12039592 agtgtagtacacaagagtatcaaactc-acacacagtcctaaacaagtatcacaaacaatacaagaaaggatcacaaaataggttctaaacttgc 12039499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 288
Target Start/End: Original strand, 13195398 - 13195669
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||| |||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  13195398 atagctctcagaaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 13195497  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgcttacaag 215  Q
     || |||||||||||| | ||| |||| |||| ||||||||||  ||||  ||| | |||||||||||| ||||  |||||||||||||||| ||   |     
T  13195498 cctaatggtcagtcac-agccctgtgacctataagacctaaaccaaaacaaaagta-gaagttaccttccaacacaaacaactaacaccttgtttcataa 13195595  T
Q  216 gtttggtgtagtacacaagagta-tcaa-actcaagacacagtcctaaacatgtaccacagacggtacaagaaag 288  Q
     || ||||||||||| ||||||| |||| |||| | ||||||||||||||| ||| |||||||| | ||||||||    
T  13195596 cttcggtgtagtacaaaagagtattcaatactc-acacacagtcctaaacaagtatcacagacgatccaagaaag 13195669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 29255001 - 29254827
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | |||||| || |||||||||||| ||||||  |||||||||||    
T  29255001 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacttatgaactcctagatctgagatcccatctcactat 29254902  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaa--cacaaactcaaggatgaagttaccttcaaaca 190  Q
    |  || |||| ||||| |||  |||| |||||||||  |||   |||||| ||| ||||||||||||||||||||    
T  29254901 cctatagtcaatcacagcccatgtgatctatcagactaaaaacaacaaacacaaagatgaagttaccttcaaaca 29254827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 15897759 - 15897464
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||| |||||||||||  |||||| ||| |||||||||||||||| |||| || | |||||||||||  |||||| ||||||   ||||||||||    
T  15897759 tatagctcttagcaaactcctcatttacaataacgacctaggacctacccatatagacgtaaacctaggaacgactagatctgagatccaatctcactat 15897660  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaa 214  Q
     || |||||| ||||||||||| |||| ||||| |||||||    | |||||| |  |||||||||||||||||  |||||||||||||||| || ||||    
T  15897659 cctaatggtctgtcacaacccctgtgacctatcggacctaa--gtagactcaaagtagaagttaccttcaaacacaaacaactaacaccttgtttcacaa 15897562  T
Q  215 ggtttggtgtagtacacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttg 313  Q
      |||||||||||||||||||||||||| |||| | | ||| |||| |||| ||| |||| ||  |||||||||||||| ||  |||||||||| |||||    
T  15897561 -ctttggtgtagtacacaagagtatcaagctcacacaaacaatcctgaacaagtaacacaaacaatacaagaaaggctcgca--aaaggttctagacttg 15897465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 300
Target Start/End: Complemental strand, 23882779 - 23882502
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| ||||  | ||||||||| |||||||||||| ||| || ||||||||||||    
T  23882779 tatagctcccagcaaactctttgtttacactaaagacctaggacctacctgtattgatttcaacctatgaactcctagatctgatatctcatctcactat 23882680  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
    || |  |||| ||||| |||| ||| | |||||||| || | ||||| | || | |||| ||||||||||||| |||||||   ||||||||||  |  |    
T  23882679 cttacagtcaatcacagcccctgtg-attatcagacttata-acaaa-taaatggtgaatttaccttcaaaca-aacaactgcaaccttgcttaacaact 23882584  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaa 300  Q
    |||| |||| |||||||||| |  ||||||| |||||||||| |||||||| || |   | ||||||||||||||||||||||    
T  23882583 ttggcgtagcacacaagagtttataactcaacacacagtccttaacatgtatca-aactgatacaagaaaggctcacaataaa 23882502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 242
Target Start/End: Original strand, 14258985 - 14259212
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||| ||||||  | ||||||| || | ||||||||||||||||||||| ||||| || || |||||||||||| ||||||  |||||||||||    
T  14258985 atagctctcaacaaacttatcgtttacaatatatgacctaggacctacccgtatagacttccacttatgaactcctagatctgagatcccatctcactat 14259084  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactc-aaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-aca 213  Q
     || |||||||||||||||||  |||| ||||||||||| ||||||||| | |||| |||||||||||||||| |  |||||||||||| ||| || |||    
T  14259085 cctaatggtcagtcacaacccatgtgacctatcagacctgaacacaaacacaaaggttgaagttaccttcaaaaacaaacaactaacacattgtttgaca 14259184  T
Q  214 aggtttggtgtagtacacaagagtatcaa 242  Q
    |  || |||||| ||||||||||||||||    
T  14259185 a-cttcggtgtaatacacaagagtatcaa 14259212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 17527969 - 17527827
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||| |||| |||||||||||||||||| |||||  |||||  |||||||||||    
T  17527969 atagttctcagcaaactccttgtttacactatatgacctaggacctacccatatagacttcaacctaggaactcatagatcagagattccatctcactat 17527870  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||||||||||||  ||| ||||| |||||||||||||||    
T  17527869 cctaatggtcagtcactgccctagtgacctatcagacctaaac 17527827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 52 - 288
Target Start/End: Original strand, 19100008 - 19100244
Alignment:
Q  52 gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat-ctcatggtcagtcacaaccccagtgaactatca 150  Q
    |||||||||| |||||||||| ||||||||||||||||| ||| || ||||||  ||||||||||| || ||||||||||||| |||| |||| ||||||    
T  19100008 gacctaggac-tacccgtatagacttcaacctaggaacttctacatctgagatcccatctcactatcctaatggtcagtcacagcccctgtgacctatca 19100106  T
Q  151 gacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaaggtttggtgtagtacacaagagta-tcaa-actc 246  Q
    |||||||  ||| |||||| |  |||||||||||||||||  ||||||||||| |||| || ||||  |||| ||||||||||||||||| |||| ||||    
T  19100107 gacctaa--acagactcaaagtagaagttaccttcaaacacaaacaactaacaacttgtttcacaa-ctttgatgtagtacacaagagtattcaatactc 19100203  T
Q  247 aagacacagtcctaaacatgtaccacagacggtacaagaaag 288  Q
     | ||||| ||||||||| ||| |||||||| ||||||||||    
T  19100204 -acacacaatcctaaacaagtatcacagacgatacaagaaag 19100244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 25964768 - 25964959
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcacta 116  Q
    |||||| || || |||||| | |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||| ||||||    
T  25964768 tatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatatcacta 25964867  T
Q  117 t-ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggat-gaagttaccttcaaaca-gaacaactaacaccttg 207  Q
    | || |||||||||||||||||  |||| |||||||||||||||  |||  ||| ||| |||||||||||| ||||  ||||||||||||||||    
T  25964868 tcctaatggtcagtcacaacccttgtgacctatcagacctaaactaaaa--caaagatagaagttaccttccaacacaaacaactaacaccttg 25964959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 25969415 - 25969606
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcacta 116  Q
    |||||| || || |||||| | |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||| ||||||    
T  25969415 tatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatatcacta 25969514  T
Q  117 t-ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggat-gaagttaccttcaaaca-gaacaactaacaccttg 207  Q
    | || |||||||||||||||||  |||| |||||||||||||||  |||  ||| ||| |||||||||||| ||||  ||||||||||||||||    
T  25969515 tcctaatggtcagtcacaacccttgtgacctatcagacctaaactaaaa--caaagatagaagttaccttccaacacaaacaactaacaccttg 25969606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 25973855 - 25974046
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcacta 116  Q
    |||||| || || |||||| | |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||| ||||||    
T  25973855 tatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatatcacta 25973954  T
Q  117 t-ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggat-gaagttaccttcaaaca-gaacaactaacaccttg 207  Q
    | || |||||||||||||||||  |||| |||||||||||||||  |||  ||| ||| |||||||||||| ||||  ||||||||||||||||    
T  25973955 tcctaatggtcagtcacaacccttgtgacctatcagacctaaactaaaa--caaagatagaagttaccttccaacacaaacaactaacaccttg 25974046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 33665868 - 33666010
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||| ||||||||||||||||| ||||||||| |||||||||||||| |||||| ||||||||||||    
T  33665868 atagctctcagcaaactcctcgtttacactatatgacataggacctacccgtatagacttcaaccaaggaactcctagatctgagatctcatctcactat 33665967  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||| ||||||| | ||||  ||| |||||||||||||||    
T  33665968 cctaatgatcagtcaaagcccctatgacctatcagacctaaac 33666010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 16309441 - 16309346
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |  |||||||||||||||||| ||||| |||||| ||||||||||    
T  16309441 tagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtcttgacttcaacctaggaactcgtagatctgagatctcatctcact 16309346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 288
Target Start/End: Original strand, 17234666 - 17234939
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||| ||||||||| ||||||||||| | |||||| |||||||||||||| |||||||||||||||||||||||| ||| || |||||| |||||    
T  17234666 atagctctctgcaaactccctgtttacactatatgacctatgacctacccgtatagacttcaacctaggaactcctagatctgatatctcatcttactat 17234765  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaa 214  Q
     || |||||||||| || |||| |||  |||||||||| ||||  |||  ||| |  |||||||||||| ||||  || ||||||||||||  || ||||    
T  17234766 cctaatggtcagtctcagcccctgtgtcctatcagaccgaaaccaaaatacaaagtagaagttaccttccaacacaaataactaacaccttatttcacaa 17234865  T
Q  215 ggtttggtgtagtacacaagagta-tcaa-actcaagacacagtcctaaacatgtaccacagacggtacaagaaag 288  Q
      || ||||||||||| ||||||| |||| |||| | ||||||||||||||| ||| |||| ||| ||||||||||    
T  17234866 -cttcggtgtagtacaaaagagtattcaatactc-acacacagtcctaaacaagtatcacaaacgatacaagaaag 17234939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 160
Target Start/End: Original strand, 19171494 - 19171633
Alignment:
Q  23 ctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat-ctc 120  Q
    ||||||||||| |||||| ||| |||| | ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||  ||||||||||| ||     
T  19171494 ctctcagcaaagtccttgcttatactatatgacctaggacctacccgtatagacttcaacctatgaactcctagatctgagattccatctcactatccta 19171593  T
Q  121 atggtcagtcacaaccccagtgaactatcagacctaaaca 160  Q
    ||||||||||||| |||  |||| ||||||||||||||||    
T  19171594 atggtcagtcacagcccatgtgacctatcagacctaaaca 19171633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 15003247 - 15003150
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||||||||||| ||||| | |||||||||||||||||||   |||||||| |||||||||||||||||||||| ||||||||||    
T  15003247 atagctctcagcaaactccttgtttgcactatatgacctaggacctacccgtactgacttcaacataggaactcctagatttgagatctcatctcact 15003150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 28623605 - 28623702
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||| |||||| || | ||||||||| ||||||||||||||||||||||  | ||||||||||||||||||||||||||||| |||||||||||||    
T  28623605 agctctgagcaaaatcttcgtttacacttaagacctaggacctacccgtattgatttcaacctaggaactcctagatttgagatctcatctcactatc 28623702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 12039767 - 12039691
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactccta 94  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  12039767 tatagctctcaacaaactcctcgtttacactaaagacctaggacctactcgtatagacttcaacctaggaactccta 12039691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 24501898 - 24501997
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||  | |||||||||| ||||||||||| | ||||  |||||||||||    
T  24501898 tatagctctcagcaaactcctcatttacactaaagacctaggacctacccgtattgatttcaacctagaaactcctagatctaagatcccatctcactat 24501997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 11960562 - 11960657
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    ||||||||||||||| ||||||| || |||||||||||||||||||| || ||||||||||||||||||||| || ||| || |||||||||||||    
T  11960562 tctcagcaaactcctcgtttacaactgaagacctaggacctacccgtctagacttcaacctaggaactcctacatctgatatctcatctcactatc 11960657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 26965650 - 26965555
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||||  |||||| || |||||||||||||||||||| || |||||||||||||||||||||||| ||||||  ||||||||||||    
T  26965650 tctcagcaaactcctcatttacaacttaagacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcactatc 26965555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 21706434 - 21706202
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctag--atttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||||||||| | |||||||||||||||||| || |  |||||||||||||||||||  || ||||||  |||||||||    
T  21706434 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtctagatatcaacctaggaactcctagatatctgagatcccatctcact 21706335  T
Q  116 at-ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgcttaca 213  Q
    || ||  |||||||||||| ||||  |||  ||||||||||||||  ||||  ||| | |||||||||||| ||||  ||||||||| | |||| ||       
T  21706334 atcctactggtcagtcacagcccctatgacatatcagacctaaaccaaaacaaaagta-gaagttaccttccaacacaaacaactaaaaacttgtttcat 21706236  T
Q  214 aggtttggtgtagtacacaagagtatcaaactca 247  Q
    |  || |||||| | |||||||||||||||||||    
T  21706235 aacttcggtgtaatgcacaagagtatcaaactca 21706202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 3567504 - 3567407
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||||||||||  | ||||||||| ||||| |||||| | |||| |||||||||||||    
T  3567504 agctctcagcaaaatcctcgtttacacttaagacctaggacctacccgtattgatttcaacctaagaacttctagatctaagatctcatctcactatc 3567407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 19216027 - 19216124
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| ||||| | |||||||||||||||||||   |||||||| ||||||||||||||||||||||  |||||||||    
T  19216027 atagctctcagcaaactcctcgttttcactatatgacctaggacctacccgtactaacttcaacttaggaactcctagatttgagatcccatctcact 19216124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 20003211 - 20003308
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||| |||| ||| |||| ||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||||    
T  20003211 atagctctcaggaaacccctcgtttgcactatatgacctaggacctacccgtacttacttcaacctaggaactcctagatttgagatcccatctcact 20003308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 104
Target Start/End: Complemental strand, 12444785 - 12444721
Alignment:
Q  40 gtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    |||| |||||| |||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  12444785 gtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatttgagat 12444721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 15038422 - 15038518
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||| |||||||| |||| ||| || ||||||||||| |||||||   |||||||||||| ||||||||||| ||||||  |||||||||    
T  15038422 atagctctcaggaaactcctcgtttgcacaaatgacctaggaccaacccgtactgacttcaacctagtaactcctagatctgagatcccatctcact 15038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 16137666 - 16137570
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| || ||| ||||||||| |||||||||   |||||||||||||||||| || || ||||||  |||||||||    
T  16137666 atagctctcagcaaactcctcgtttgcagtaatgacctaggatctacccgtactgacttcaacctaggaactcataaatctgagatcacatctcact 16137570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 19894705 - 19894565
Alignment:
Q  19 atagctctcagcaaactccttgtttacacta-aagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||| |||| |||||||||||| || | |||||||||||||||| |||| |||||||| |  |||||||||||| | ||||  |||||||||||    
T  19894705 atagctctcatcaaattccttgtttacattatatgacctaggacctaccc-tatagacttcaacttctgaactcctagatct-agatcccatctcactat 19894608  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||| ||||||||| |||  |||| |||||||||||||||    
T  19894607 cctaatgctcagtcacagcccttgtgacctatcagacctaaac 19894565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 9384688 - 9384761
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactc 91  Q
    |||||||||||||||||||| |||| ||||| | |||||||||||||||||||   ||||||||||||||||||    
T  9384688 atagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaactc 9384761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 15007421 - 15007344
Alignment:
Q  19 atagctctcagcaaactccttgtttacacta-aagacctaggacctacccgtatatacttcaacctaggaactcctag 95  Q
    |||||||||||||||||||| |||| ||||| | ||||||||||||||||||    ||||||||||||||||||||||    
T  15007421 atagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtgctgacttcaacctaggaactcctag 15007344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 20465749 - 20465685
Alignment:
Q  250 acacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
    ||||||||||||||| ||| |||| ||| ||||||||||| |||||||| |||||||||||||||    
T  20465749 acacagtcctaaacaagtatcacaaacgatacaagaaaggttcacaatataggttctaaacttgc 20465685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 29253535 - 29253463
Alignment:
Q  250 acacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgcttcaaca 321  Q
    ||||||||||||||||||| |||| | | ||||||||||||||||||| |||||| |||||||||| ||||||    
T  29253535 acacagtcctaaacatgtatcacaaatgatacaagaaaggctcacaataaaaggtactaaacttgcatcaaca 29253463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 20765046 - 20764982
Alignment:
Q  51 agacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||||| |  ||||||||||| |||||| ||||| |||||| ||||||||||    
T  20765046 agacctaggacctacccgtcttgacttcaacctaagaactcttagatctgagatctcatctcact 20764982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 21323322 - 21323262
Alignment:
Q  55 ctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||| ||| ||||||  |||||||||||||||||||||||| |||||| ||||||||||    
T  21323322 ctaggatctaaccgtattgacttcaacctaggaactcctagatctgagatctcatctcact 21323262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 18152735 - 18152694
Alignment:
Q  74 acttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  18152735 acttcaacctaggaactcctagatctgagatctcatctcact 18152694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 30425014 - 30425095
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    ||||||||||||||  ||||||| ||  |||||||||||||||  ||||  ||||||||||||||||| |||||| ||||||    
T  30425014 tctcagcaaactccaagtttacaactctagacctaggacctacttgtattgacttcaacctaggaacttctagatctgagat 30425095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 28623754 - 28623875
Alignment:
Q  173 tgaagttaccttcaaacagaacaactaacacctt-gcttacaaggtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtacca 271  Q
    |||||||||||||||||| |||| |||  || || ||||||||| |||||||||| | |||||||| |  ||||||| | |||||||| ||| |||| ||    
T  28623754 tgaagttaccttcaaacaaaaca-ctacgacatttgcttacaagctttggtgtagcatacaagagtttacaactcaataaacagtccttaacttgtatca 28623852  T
Q  272 cagacggtacaagaaaggctcaca 295  Q
     ||| | |||||||||||||||||    
T  28623853 -agatgatacaagaaaggctcaca 28623875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 32449325 - 32449376
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgta 70  Q
    |||| ||||||||||||||| |||| |||||| | |||||||||||||||||    
T  32449325 atagttctcagcaaactcctcgtttgcactaatgtcctaggacctacccgta 32449376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 322
Target Start/End: Complemental strand, 21323209 - 21323058
Alignment:
Q  171 gatgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtacc 270  Q
    |||||||||||||||||||| ||||||||  |||||| ||| ||   ||||||||| ||| | |||| |  ||||||| | |||||||| | |||||| |    
T  21323209 gatgaagttaccttcaaacaaaacaactacgaccttgtttaaaatcattggtgtagcaca-acgagtttacaactcaataaacagtccttatcatgtatc 21323111  T
Q  271 acagacggtacaagaaaggctcacaataaa--ggttctaaacttgcttcaacac 322  Q
    | ||| | |||| |||||||||||||||||   || |||||||||| |||||||    
T  21323110 a-agatgttacacgaaaggctcacaataaaacagtactaaacttgcatcaacac 21323058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 13870396 - 13870343
Alignment:
Q  107 catctcactatc-tcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
    |||||||||||| | ||||||||||||| ||| ||||| |||||||||||||||    
T  13870396 catctcactatcctaatggtcagtcacagccctagtgacctatcagacctaaac 13870343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 17869844 - 17869792
Alignment:
Q  173 tgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtag 226  Q
    |||||||||||||||||| ||||||||  |||||||||| ||| ||||||||||    
T  17869844 tgaagttaccttcaaaca-aacaactacaaccttgcttaaaagttttggtgtag 17869792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 17879596 - 17879544
Alignment:
Q  173 tgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtag 226  Q
    |||||||||||||||||| ||||||||  |||||||||| ||| ||||||||||    
T  17879596 tgaagttaccttcaaaca-aacaactacaaccttgcttaaaagttttggtgtag 17879544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 24561560 - 24561600
Alignment:
Q  50 aagacctaggacctacccgtatatacttcaacctaggaact 90  Q
    |||||||||||||||||||| || | |||||||||||||||    
T  24561560 aagacctaggacctacccgtctagatttcaacctaggaact 24561600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 186; Significance: 1e-101; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 7625 - 7329
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  7625 tatagctctcaacaaactcctcatttacactaaagacctaggacctacccatatagacttcaacctaggaactcctagatctgagatcccatctcactat 7526  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactc-aaggatgaagttaccttcaaacagaacaactaacaccttgcttacaagg 216  Q
    |  |||||||||||||||||| |||| ||||||||||||||||||||||| || | |||||||||||||||||| |||||||||||||||| |||  |      
T  7525 cctatggtcagtcacaacccctgtgacctatcagacctaaacacaaactcaaaagttgaagttaccttcaaaca-aacaactaacaccttgtttaacaac 7427  T
Q  217 tttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
    || ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||    
T  7426 ttcggtgtagtacacaagagtatcaaactcaacacacagtcctaaacatgtatcacagacgatacaagaaaggctcacaatataggttctaaacttgc 7329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 18211 - 17916
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||  |||| ||||||    
T  18211 tatagctctcagcaaactcctcgattacactaaagac-taggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatcacactat 18113  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactc-aaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaag 215  Q
    || |||||||||||||||||| |||| |||||||| |||||||||||||| || | |||||||||||||||||| |||||||||||||||| || ||||     
T  18112 cttatggtcagtcacaacccctgtgacctatcagaactaaacacaaactcaaaagttgaagttaccttcaaaca-aacaactaacaccttgtttcacaa- 18015  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
     || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||| |||||||||||||||    
T  18014 cttcggtgtagtacacaagagtatcaaactcaacacacagtcctaaacatgtatcacggacgatacaagaaaggctcacaatataggttctaaacttgc 17916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 27605 - 27310
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||  |||| ||||||    
T  27605 tatagctctcagcaaactcctcgattacactaaagac-taggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatcacactat 27507  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactc-aaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaag 215  Q
    || |||||||||||||||||| |||| |||||||| |||||||||||||| || | |||||||||||||||||| |||||||||||||||| || ||||     
T  27506 cttatggtcagtcacaacccctgtgacctatcagaactaaacacaaactcaaaagttgaagttaccttcaaaca-aacaactaacaccttgtttcacaa- 27409  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
     || ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||||||||||||||| |||||||||||||||    
T  27408 cttcggtgtagtacacaagagtatcaaactcaacacacagtcctaaacatgtatcacggacgatacaagaaaggctcacaatataggttctaaacttgc 27310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 171; Significance: 8e-92; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 18 - 313
Target Start/End: Complemental strand, 11667947 - 11667651
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  11667947 tatagctctcagcaaactcctcgtttacactaaagaccatggacctacccgtatagacttcaacctaggaactcctagatctgagattccatctcactat 11667848  T
Q  118 c--tcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaag 215  Q
    |    |||||||||||||||||| |||| |||||||||||||||||||||||||  |||||||||| |||||||| |||||||||||||||| ||   |     
T  11667847 cctatatggtcagtcacaacccctgtgacctatcagacctaaacacaaactcaaatatgaagttacattcaaaca-aacaactaacaccttgtttcataa 11667749  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttg 313  Q
     || ||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||| ||||||||||| |||||||||||||||||||||||    
T  11667748 cttcggtgtagtacacaagagtatcaaactcaacacacagtccttaacatgtatcacaaacgatacaagaaaggatcacaataaaggttctaaacttg 11667651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 69 - 314
Target Start/End: Original strand, 24986125 - 24986368
Alignment:
Q  69 tatatacttcaacctaggaactcctagatttgagatatcatctcactatctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactca 168  Q
    |||| |||||||||||||||||  ||||| |||||| |||||||||||||  ||||||||||||||| || || | |||||| |||||||||||||||||    
T  24986125 tatagacttcaacctaggaacttatagatctgagatctcatctcactatcctatggtcagtcacaactcctgtaacctatcaaacctaaacacaaactca 24986224  T
Q  169 aggatgaagttaccttcaaacagaacaactaacaccttgctt-acaaggtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgt 267  Q
    | |||||||||||||||||| |  ||||| ||||||||| || ||||  || ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24986225 aagatgaagttaccttcaaaaa--acaaccaacaccttgtttcacaac-ttcggtgtagtacacaagagtatcaaactcaacacacagtcctaaacatgt 24986321  T
Q  268 accacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
    | |||| ||| |||||| |||||||||||||||||||||||||||||    
T  24986322 atcacaaacgatacaagtaaggctcacaataaaggttctaaacttgc 24986368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 296
Target Start/End: Complemental strand, 20841349 - 20841070
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||  ||| | |||||||||||||||||||||||| ||||||  |||||||||||    
T  20841349 tatagctcttagcaaactcctcgtttacactaaagacctaggacctacatgtacagacttcaacctaggaactcctagatctgagatcccatctcactat 20841250  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttg-cttacaa 214  Q
     || ||||| ||||||| |||| |||| |||||||||||||  ||| |||||| |  |||||||||||||||||  ||||||||||||||||  ||||||    
T  20841249 cctaatggttagtcacatcccctgtgacctatcagacctaa--acagactcaaagtagaagttaccttcaaacacaaacaactaacaccttgttttacaa 20841152  T
Q  215 ggtttggtgtagtacacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaa 296  Q
      || |||||||| || |||||||||||||||| | | | ||| ||||||| ||| |||| | | || |||||||||||||||    
T  20841151 -cttcggtgtagtgcataagagtatcaaactcacacaaatagtgctaaacaagtatcacaaatgatataagaaaggctcacaa 20841070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 300
Target Start/End: Original strand, 12753135 - 12753415
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| |||  | |||||||||| ||||||||||| ||||||  |||||||||||    
T  12753135 tatagctctcagcgaactcctcgtttacactaaagacctaggacctacccatattgatttcaacctagaaactcctagatctgagattccatctcactat 12753234  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
    |  ||||||||||||| |||| ||||  ||||||||||||||| ||||  || |||||||||||||||||||| |  | |||||| | |||||   || |    
T  12753235 cctatggtcagtcacagcccctgtgacatatcagacctaaacataaac-aaacgatgaagttaccttcaaacaaactacctaacatcgtgcttcatagct 12753333  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaa 300  Q
    || |||||||  ||| |||| |  ||||||| | |||||||| | |||||| || ||| | ||||||||||||||||||||||    
T  12753334 ttagtgtagtgtacatgagtttacaactcaacaaacagtccttagcatgtatca-agatgatacaagaaaggctcacaataaa 12753415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 300
Target Start/End: Complemental strand, 17851457 - 17851180
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||| || | |||||||||||||||||||||| ||||||  |||||||||||    
T  17851457 tatagctctcagcaaactcctcgtttacactaaagacctaggacctagccgtctacatttcaacctaggaactcctagatctgagatcccatctcactat 17851358  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
    | ||  |||| ||||| |||| ||| | |||||||| |||| |||||   || | |||||||||||||||||| ||||||||  ||||||||||  || |    
T  17851357 cccacagtcaatcacagcccctgtg-attatcagacttaaa-acaaa-aaaacggtgaagttaccttcaaaca-aacaactacaaccttgcttaatagtt 17851262  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaa 300  Q
    |||| |||| |||||||||| |  ||||||| |||||||||| |||||||| || |   | ||||||||||||||||||||||    
T  17851261 ttggcgtagcacacaagagtttacaactcaacacacagtccttaacatgtatca-aactgatacaagaaaggctcacaataaa 17851180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 23478019 - 23477723
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||  |||||||||| ||||||||||| ||||||||||||  | |||||||||||||||||||||| ||||||  |||||||  ||    
T  23478019 tatagctctcagcaaacaacttgtttacaataaagacctagaacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcagaat 23477920  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
    |   | |||| ||| | |||| |||| |||||| || ||||||||||| ||| |||||||||||||||||| | ||||||||  ||||  ||||  || |    
T  23477919 cctctagtcaatcatagcccctgtgatctatcaaacttaaacacaaacacaaagatgaagttaccttcaaata-aacaactacaacctaacttaacagct 23477821  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgc 314  Q
    |||| |||| |||||||||| |  ||||||| ||||| | ||||||||| | |||| | | ||||||||||| ||||||| |||||| ||||||||||    
T  23477820 ttggcgtagcacacaagagtttacaactcaacacacaattctaaacatgaatcacaaaagatacaagaaaggatcacaataaaaggtactaaacttgc 23477723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 206
Target Start/End: Original strand, 4246110 - 4246300
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||   ||||||||||    
T  4246110 atagctctcagcaaactcctcgtttacactatatgacctaggacctacctgtatagacttcaacctaggaactcctagatctgagatcctatctcactat 4246209  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacacctt 206  Q
     || ||||||||||||| ||||  ||| |||||||||||||||  |||| ||| |  |||||||||||| ||||  |||||||||||||||    
T  4246210 cctaatggtcagtcacagcccctctgacctatcagacctaaaccaaaacacaaagtagaagttaccttccaacacaaacaactaacacctt 4246300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 26972484 - 26972342
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatactt-caacctaggaactcctagatttgagatatcatctcacta 116  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||| |||||||||||||||||||| ||||||  ||||||||||    
T  26972484 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagactttcaacctaggaactcctagatctgagatcccatctcacta 26972385  T
Q  117 tc-tcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
    || | ||||||||||||  |||||||| || |||||||||||||    
T  26972384 tcttaatggtcagtcactgccccagtg-accatcagacctaaac 26972342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 1973387 - 1973532
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||  |||||||||||    
T  1973387 tatagctctcagaaaactcctcatttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcactat 1973486  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaa 164  Q
    |  |  |||| |||||||||| ||| | ||||||||  |||||||||    
T  1973487 cctacagtcaatcacaacccctgtg-attatcagactaaaacacaaa 1973532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 14745866 - 14745725
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||| || |||||||||| | ||| ||| ||||||||||||| |||||||||||||||||| ||||| ||||||  |||||||||||    
T  14745866 atagctctcagcaaactactcgtttacactatatgacatag-acctacccgtatagacttcaacctaggaactcttagatctgagatcacatctcactat 14745768  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || |||||||||||||  |||||||| |||||||||||||||    
T  14745767 cctaatggtcagtcacagtcccagtgatctatcagacctaaac 14745725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 13165469 - 13165659
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||| |||||| ||||||| || | ||||||||||||||||||||| |||||||| ||||||||||||||| | ||||  |||||||||||    
T  13165469 atagctctcagcatactcctcgtttacagtatatgacctaggacctacccgtatagacttcaacataggaactcctagatctaagatcccatctcactat 13165568  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttg 207  Q
     || ||||||||||||  || || ||| |||||||||||||||  ||||  ||| | |||||||||||| ||||  |||||||| |||||||    
T  13165569 cctaatggtcagtcactgccgcaatgacctatcagacctaaaccaaaacaaaagta-gaagttaccttctaacacaaacaactagcaccttg 13165659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 47941424 - 47941324
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| || | |||||||||| |||||||| || |||||| ||||||||||||    
T  47941424 tatagctcttagcaaactcctcgtttacactaaagacataggacctacccgtctagatttcaacctagtaactcctaaatctgagatctcatctcactat 47941325  T
Q  118 c 118  Q
    |    
T  47941324 c 47941324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 268
Target Start/End: Complemental strand, 15804164 - 15803946
Alignment:
Q  50 aagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctcatggtcagtcacaaccccagtgaactatc 149  Q
    ||||||||||||||||||||||  | |||||| || |||||||||||| |||||| |||| ||||||||  |  |||| ||||| |||| ||||  ||||    
T  15804164 aagacctaggacctacccgtattgatttcaacttaagaactcctagatctgagatctcatttcactatcctacagtcaatcacagcccctgtgat-tatc 15804066  T
Q  150 agacctaaacaca--aactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtagtacacaagagtatcaaactca 247  Q
    | || |||||||   || |||| |||||||||||||||||||| ||||||||  ||||| |||| ||| ||||| |||| |||||||||| |  ||||||    
T  15804065 atacttaaacacctcaaatcaatgatgaagttaccttcaaaca-aacaactacaaccttacttaaaagctttggcgtagcacacaagagtttacaactca 15803967  T
Q  248 agacacagtcctaaacatgta 268  Q
    | ||||| |||| ||||||||    
T  15803966 acacacaatccttaacatgta 15803946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 104
Target Start/End: Original strand, 17038322 - 17038406
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||| | |  |||||||||||||||||||||||| ||||||    
T  17038322 tagctctcagcaaactcctcgtttacactaaagacataggacctacccatcttgacttcaacctaggaactcctagatctgagat 17038406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 40313307 - 40313211
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||| |||||   |||||||||||||||||| || || |||||| ||||||||||    
T  40313307 atagctctcagcaaactcctcgtttgcactaatgacctaggacctagccgtactgacttcaacctaggaactcatatatctgagatctcatctcact 40313211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 45599413 - 45599317
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||| ||||| |||||||||  ||| |||||| |||||||||||||||||||   |||||||||||||||||||||||| |||||| ||||||||||    
T  45599413 atagttctcaacaaactcctcatttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatctcatctcact 45599317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 10340208 - 10340142
Alignment:
Q  52 gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| |||||| |||||||||||||    
T  10340208 gacctaggacctacccgtctatatttcaacctaggaactcctagatctgagatctcatctcactatc 10340142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 17379702 - 17379610
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||| ||||||| ||  ||||||||||||||||||| |  |||||||||||| ||||||||||| ||||||  |||||||||    
T  17379702 tctcagcaaactcctcgtttacaactctagacctaggacctacccgtcttgacttcaacctagaaactcctagatctgagatcccatctcact 17379610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 17012079 - 17012172
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctca 113  Q
    |||| ||||||||||||| |||| ||||| | ||||||||||||||| |||   |||||||||||||||||||| ||| |||||| ||||||||    
T  17012079 agctttcagcaaactcctcgtttgcactatatgacctaggacctacctgtactgacttcaacctaggaactcctggatctgagatctcatctca 17012172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 33062460 - 33062545
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgaga 103  Q
    |||||||| ||||||||||| |||| ||||| | |||||||||||||||| ||   |||||||||||||||||||||||| |||||    
T  33062460 atagctcttagcaaactcctcgtttgcactatatgacctaggacctacccttactgacttcaacctaggaactcctagatctgaga 33062545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 51472172 - 51472091
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    ||||| ||||||||| ||||||| ||  ||||||||||||||||||| | || |||||||||||||||||||||| ||||||    
T  51472172 tctcatcaaactcctcgtttacaactctagacctaggacctacccgtctttatttcaacctaggaactcctagatctgagat 51472091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 8281999 - 8282091
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||| ||||||||||||||||| ||  ||||| ||||||||||||| |  ||||||||||||||| |||||||| ||||||  |||||||||    
T  8281999 tctcaacaaactccttgtttacaactctagaccaaggacctacccgtcttaacttcaacctaggaattcctagatctgagatcccatctcact 8282091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 17355910 - 17355818
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||| ||||||| ||  | ||||||||||||||||| |  |||||||||||||||||| ||||| ||||||  |||||||||    
T  17355910 tctcagcaaactcctcgtttacaactctacacctaggacctacccgtcttgacttcaacctaggaactcatagatctgagatcccatctcact 17355818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 52436904 - 52436807
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||| |||| |||||||| |||  ||||| | ||| ||||| |||||||||   |||||||||||||||||||||||| |||||| ||||| ||||    
T  52436904 atagctttcagtaaactcctcgttcgcactatatgacataggatctacccgtactgacttcaacctaggaactcctagatctgagatctcatcccact 52436807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 18390154 - 18390092
Alignment:
Q  53 acctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||| ||||||||  |||||||| ||| ||||||||||| ||||||  |||||||||    
T  18390154 acctaggaccaacccgtattgacttcaacgtagaaactcctagatctgagatcccatctcact 18390092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 3e-91; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 29546222 - 29545927
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||| |||||| ||||||||||||    
T  29546222 tataactctcagcaaacttctcgtttacactaaagacctaggacctacccgtatagactttagcctaggaactcctagatctgagatctcatctcactat 29546123  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttaca-agg 216  Q
    |  |||| |||||||| || | |||| |||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||||||| ||||| |      
T  29546122 cctatggccagtcacagcctctgtgacctatcagacctaaacacaaacttaaagatgaagttaccttcaaaca-aacaactagcaccttg-ttacacaac 29546025  T
Q  217 tttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
    || ||||||||| ||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||    
T  29546024 ttcggtgtagtatacaagagtatcaaactcaacacacagtcctaaacatgtatcacaaacgatacaagaaaggctcacaataaaggttctaaacttgc 29545927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 21 - 314
Target Start/End: Original strand, 15506344 - 15506637
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    |||||||||||||||||| ||||||| |  | ||||||||||||||||||||| |||||||||||||||||||||||| |||  |  ||||||||||||     
T  15506344 agctctcagcaaactcctcgtttacattttatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga--tcccatctcactatcc 15506441  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaag-gatgaagttaccttcaaacagaacaactaacaccttgctt-acaaggt 217  Q
     |||||||||||||||||| |||| ||||||||||||||| ||||| |||  | |||||||||||||||||| |||||||| ||||||| || ||||  |    
T  15506442 tatggtcagtcacaacccctgtgacctatcagacctaaactcaaacacaaaagttgaagttaccttcaaacaaaacaactagcaccttgtttcacaac-t 15506540  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
    | |||||||||||||||||||| |||||||| ||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||| ||||||    
T  15506541 tcggtgtagtacacaagagtattaaactcaacacacagtcctaaacatgtatcacaaacgatacaagaaagactcacaataaaggttctagacttgc 15506637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 18 - 314
Target Start/End: Original strand, 20991616 - 20991911
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||| ||||||   ||||||||||    
T  20991616 tatagctctcagcaaactcctcgtttacactaaagacctaggacctatccagatagacttcaacctaggaactcctagatctgagatcctatctcactat 20991715  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaag 215  Q
     || ||||||||||||| |||| |||| |||||||||||||||| ||| |||| | |||||||||||||||||| |||||||||||||||| || ||||     
T  20991716 cctaatggtcagtcacagcccctgtgacctatcagacctaaacaaaaattcaaagttgaagttaccttcaaaca-aacaactaacaccttgtttcacaa- 20991813  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
     ||  |||||||||||||||||||||||||| | ||||||||||||||| ||| |||| | | ||||||||||| |||||||| | |||||||||||||    
T  20991814 cttcagtgtagtacacaagagtatcaaactc-acacacagtcctaaacaagtatcacaaatgatacaagaaaggatcacaatatatgttctaaacttgc 20991911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 321
Target Start/End: Original strand, 4458816 - 4459116
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat-c 118  Q
    |||||||||||||||||| |||||||||  | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||| |    
T  4458816 agctctcagcaaactcctcgtttacactttatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactatcc 4458915  T
Q  119 tcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaagg 216  Q
    | ||||||||||||| |||| |||| ||||||||||||||| ||||| ||| |||||||||||||| |||||  |||||||||||||||  || ||||      
T  4458916 taatggtcagtcacagcccctgtgacctatcagacctaaac-caaacacaaagatgaagttacctttaaacacaaacaactaacaccttatttcacaa-c 4459013  T
Q  217 tttggtgtagtacacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgct 315  Q
    ||||||||||||||||||||||||||||||| | |||||||| |||||| ||| |||| ||| |||   ||||||  ||||||||| |||||||||| |     
T  4459014 tttggtgtagtacacaagagtatcaaactcacacacacagtcttaaacaagtatcacatacgatac---aaaggcatacaataaagattctaaactttca 4459110  T
Q  316 tcaaca 321  Q
    ||||||    
T  4459111 tcaaca 4459116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 20 - 321
Target Start/End: Original strand, 16436850 - 16437152
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||| ||  ||||||||||||     
T  16436850 tagctctcaacaaactcctcatttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgacatcccatctcactatcc 16436949  T
Q  120 catggtcagtcacaaccccagtgaactatcagaccta-aac-acaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
     |  |||| ||||| |||| |||| |||||||||  | ||| |||||| ||| |||||||||||||||||||  || |||||  |||||||||| ||| |    
T  16436950 tacagtcaatcacagcccctgtgatctatcagactaacaacaacaaacacaaagatgaagttaccttcaaac--aaaaactacaaccttgcttaaaagct 16437047  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgctt 316  Q
    |||| |||| |||||||||| || ||||| | ||||||||||||||||||| |||| ||| |||||||||||||| |||| |||||| |||||||||| |    
T  16437048 ttggcgtagaacacaagagtttccaactctacacacagtcctaaacatgtatcacatacgatacaagaaaggctcgcaataaaaggtactaaacttgcat 16437147  T
Q  317 caaca 321  Q
    |||||    
T  16437148 caaca 16437152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 21 - 312
Target Start/End: Complemental strand, 16207963 - 16207673
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat-c 118  Q
    |||||||||||||||||| |||||||||  | ||||||| ||||||||||||  | |||||||||||||||| ||||| ||||||  ||||||||||| |    
T  16207963 agctctcagcaaactcctcgtttacactttatgacctagcacctacccgtattgatttcaacctaggaactcatagatctgagatcccatctcactatcc 16207864  T
Q  119 tcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaagg 216  Q
    | |||| ||||||||||||| |||| ||||||||||| || |||||| ||||| ||||||||||||||||||  |||||||||||| ||| || ||||      
T  16207863 taatggccagtcacaacccctgtgacctatcagacctcaa-acaaacacaaggttgaagttaccttcaaacacaaacaactaacacattgtttcacaa-c 16207766  T
Q  217 tttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaactt 312  Q
    || ||||||||||||||||||||||||||| | ||||| |||||||||  || |||||||| |||||||||||||||||  |||||||||||||||    
T  16207765 ttcggtgtagtacacaagagtatcaaactc-acacacaatcctaaacaaatatcacagacgatacaagaaaggctcaca--aaaggttctaaactt 16207673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 321
Target Start/End: Original strand, 10279888 - 10280188
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||  | |||||||||||||||| ||||| |||||| |||||||| |||    
T  10279888 tatagctctcagcaaactcctcgtttgcactaaatacctaggacctatccgtattgatttcaacctaggaactcgtagatctgagatctcatctcattat 10279987  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
    | ||| |||| || | | ||| |||| |||||||||  |||||||||| ||  ||||||||||||||||||||| |||||||  ||||| ||||  || |    
T  10279988 cccatagtcaatc-ccagccctgtgatctatcagactaaaacacaaacaca--gatgaagttaccttcaaacag-acaactacaaccttacttaacagct 10280083  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgctt 316  Q
    |||| |||| ||||||| || |  ||| ||| |||||||||||||||| || |||| ||| ||||||||||||||||||| |||||| |||||||||| |    
T  10280084 ttggcgtagcacacaagtgtttacaacccaacacacagtcctaaacatttatcacaaacgatacaagaaaggctcacaataaaaggtactaaacttgcat 10280183  T
Q  317 caaca 321  Q
    |||||    
T  10280184 caaca 10280188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 19 - 285
Target Start/End: Original strand, 11998954 - 11999224
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||| |||||||||  ||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||||||| |||    
T  11998954 atagctctcaacaaactcctcatttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcattat 11999053  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaa 214  Q
     || ||||||||||||| |||  | || |||||||||||||||  |||| ||| ||||||||||||||||||||  |||||||||||||||| || ||||    
T  11999054 cctaatggtcagtcacagcccttgcgacctatcagacctaaaccaaaacacaaagatgaagttaccttcaaacataaacaactaacaccttgtttcacaa 11999153  T
Q  215 ggtttggtgtagtacacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaaga 285  Q
      || |||||||| ||||||||||||||||||| | | ||||| ||||||| ||| |||||||| |||||||    
T  11999154 -cttcggtgtagtgcacaagagtatcaaactcacacaaacagttctaaacaagtatcacagacgatacaaga 11999224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 42636321 - 42636468
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||  | |||||||||||||||||||||| |||||| ||||||||||||    
T  42636321 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccatattgatttcaacctaggaactcctagatctgagatctcatctcactat 42636420  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaac 165  Q
    |  | ||||| ||||| |||| |||| |||||||||||||||||||||    
T  42636421 cctagggtcaatcacagcccctgtgatctatcagacctaaacacaaac 42636468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 321
Target Start/End: Original strand, 14165240 - 14165544
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||| ||||||||| |||||||||| | || |||| ||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  14165240 atagctctcaacaaactcctcgtttacactatatgatctagaacctacccgtatagacttcaacctaggaactcctagatctgagatcacatctcactat 14165339  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaa 214  Q
     || ||||||||||||  ||||||||| |||||||||||||||  ||||  ||    |||||||||||| ||||  |||||||||||||||| || ||||    
T  14165340 cctaatggtcagtcactgccccagtgacctatcagacctaaaccaaaacataa--tagaagttaccttccaacacaaacaactaacaccttgtttcacaa 14165437  T
Q  215 ggtttggtgtagtacacaagagtatcaa-actca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaactt 312  Q
      || | ||||||||| ||||||||||| ||||| | ||||| ||||||||| ||| ||||| || |||||| ||||| |||| ||||| ||||||||||    
T  14165438 -cttcgatgtagtaca-aagagtatcaatactcacacacacaatcctaaacaagtatcacaggcgatacaagtaaggcacacattaaagattctaaactt 14165535  T
Q  313 gcttcaaca 321  Q
    || ||||||    
T  14165536 gcatcaaca 14165544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 21 - 248
Target Start/End: Original strand, 15436125 - 15436352
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    |||||||||||||||||| |||||||||  | ||| |||||||||||| |||| |||||||| |||||||||||| ||||||  |  |||||| |||||     
T  15436125 agctctcagcaaactcctcgtttacactttatgacttaggacctacccatatagacttcaacgtaggaactcctatatttga--tcccatctcgctatcc 15436222  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacacaaactca-aggatgaagttaccttcaaacagaacaactaacaccttgctt-acaaggt 217  Q
     ||||||||||||| |||| |||| ||||||||||||||| ||||| || | | |||||||||||||||||| |||||||| ||||||| || ||||  |    
T  15436223 tatggtcagtcacagcccctgtgacctatcagacctaaactcaaacacagaagttgaagttaccttcaaacaaaacaactagcaccttgtttcacaa-ct 15436321  T
Q  218 ttggtgtagtacacaagagtatcaaactcaa 248  Q
    | |||||||||||||||||||| ||||||||    
T  15436322 tcggtgtagtacacaagagtattaaactcaa 15436352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 247
Target Start/End: Original strand, 12325890 - 12326117
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat-c 118  Q
    ||||||||||||||||||  ||||||||  | ||||| ||||||||| ||||| ||||||||||||||||||||| || ||||||   |||||||||| |    
T  12325890 agctctcagcaaactcctcatttacactttatgaccttggacctacctgtatagacttcaacctaggaactcctacatctgagatccaatctcactatcc 12325989  T
Q  119 tcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaagg 216  Q
    | |||||||| ||||||||| |||| ||||||||| |||  ||| ||||||  ||||||||||| || ||||  |||||||||||||||| || ||||      
T  12325990 taatggtcagccacaacccctgtgacctatcagacataa--acagactcaaatatgaagttaccatcgaacacaaacaactaacaccttgtttcacaa-c 12326086  T
Q  217 tttggtgtagtacacaagagtatcaaactca 247  Q
    |||||||||||||||||||||||||||||||    
T  12326087 tttggtgtagtacacaagagtatcaaactca 12326117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 14926722 - 14926971
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||  | |||||||||| |||| |||||| |||||| |||||||||||||    
T  14926722 atagctctcagcaaactcctcgtttacagtaaagacctaggacctacccgtattgatttcaacctagaaacttctagatatgagatttcatctcactatc 14926821  T
Q  119 tcatggtcagtcacaaccccagtgaactatcagacctaaaca---caaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaag 215  Q
      |   ||| |||||||||| ||| | ||||| || ||||||   ||||  ||| |||||||||||||||||||| ||||||||  ||||| |||| |||    
T  14926822 ctacaatcaatcacaacccctgtg-attatcatacttaaacaactcaaa-acaatgatgaagttaccttcaaaca-aacaactacaacctttcttaaaag 14926918  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgta 268  Q
     ||||| |||| ||| |||||| |  ||||||| |||||||||| ||||||||    
T  14926919 ctttggcgtagcacagaagagtttacaactcaacacacagtccttaacatgta 14926971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 268
Target Start/End: Original strand, 15350188 - 15350437
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||||  | |||||||||| |||| |||||| |||||| |||||||||||||    
T  15350188 atagctctcagcaaactcctcgtttacagtaaagacctaggacctacccgtattgatttcaacctagaaacttctagatatgagatttcatctcactatc 15350287  T
Q  119 tcatggtcagtcacaaccccagtgaactatcagacctaaaca---caaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaag 215  Q
      |   ||| |||||||||| ||| | ||||| || ||||||   ||||  ||| |||||||||||||||||||| ||||||||  ||||| |||| |||    
T  15350288 ctacaatcaatcacaacccctgtg-attatcatacttaaacaactcaaa-acaatgatgaagttaccttcaaaca-aacaactacaacctttcttaaaag 15350384  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgta 268  Q
     ||||| |||| ||| |||||| |  ||||||| |||||||||| ||||||||    
T  15350385 ctttggcgtagcacagaagagtttacaactcaacacacagtccttaacatgta 15350437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 11521494 - 11521352
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||| | | ||  |||||||||||    
T  11521494 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatatactccaacctaggaactcctagatctaaaatcccatctcactat 11521395  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || |||||||||||| |||| ||||| || ||||||||||||    
T  11521394 cctaatggtcagtcactaccctagtgacctgtcagacctaaac 11521352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 645208 - 645350
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||| || |||||||||| | |||||||||||| |||||||| | |||||||||||||||||||||| ||||||  |||||||||||    
T  645208 atagctctcagcaaacttctcgtttacactacatgacctaggacctccccgtatagatttcaacctaggaactcctagatctgagatcccatctcactat 645307  T
Q  118 c-tcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
    | | |||||| ||||||||| | |||| ||||||||| |||||    
T  645308 cgtaatggtcggtcacaaccactgtgacctatcagacataaac 645350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 300
Target Start/End: Original strand, 10660995 - 10661217
Alignment:
Q  76 ttcaacctaggaactcctagatttgagatatcatctcactatctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatga 175  Q
    |||||||||||||||||||||| ||||||  ||||||||||||| || |||||||||| |||| |||| |||||||||||||||||||||  ||   |||    
T  10660995 ttcaacctaggaactcctagatctgagatcccatctcactatcttatagtcagtcacagcccctgtgacctatcagacctaaacacaaac-aaacagtga 10661093  T
Q  176 agttaccttcaaacagaacaactaacaccttgctt-acaaggtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacag 274  Q
    ||||||||||||||| |  | |||||||| ||||| ||||  |||||||||||  |||  ||| |  ||||||| | |||||||| | |||||| || ||    
T  10661094 agttaccttcaaacaaactacctaacaccgtgcttcacaa-ctttggtgtagtgtacacaagtttacaactcaacaaacagtccttagcatgtatca-ag 10661191  T
Q  275 acggtacaagaaaggctcacaataaa 300  Q
    | | ||||||||||||||||||||||    
T  10661192 atgatacaagaaaggctcacaataaa 10661217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 299
Target Start/End: Complemental strand, 20925186 - 20924913
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||| ||||||||| |||||||||||||||||| |||||||| || || |||||||| |||||||||||| |||||||||  ||||||||| |    
T  20925186 tatagctctcaacaaactcctcgtttacactaaagacctaagacctacctgtctagacttcaacttaggaactcctaaatttgagatcccatctcacttt 20925087  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
    |  ||    ||||||| | ||  || | ||||| ||  ||||| ||||  ||   |||||||||||||||||| |||| |||  |||||||||| ||| |    
T  20925086 cctat----agtcacagcacctatg-attatcaaactaaaacataaac-aaacagtgaagttaccttcaaaca-aacagctacaaccttgcttataagct 20924994  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataa 299  Q
    ||||||||| |||||||| | |  ||||||| ||||| |||| | |||||| |||| ||  |||||||||||||||||||||    
T  20924993 ttggtgtagcacacaaga-tttacaactcaatacacaatccttagcatgtatcacaaacaatacaagaaaggctcacaataa 20924913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 9564331 - 9564426
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||  |  |||||||||||||||||||||||| ||||||  |||||||||    
T  9564331 tagctctcagcaaactcctcgtttacacaaaagacctaggacctacccgccttgacttcaacctaggaactcctagatctgagatcccatctcact 9564426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 11588551 - 11588681
Alignment:
Q  31 aaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc-tcatggtcag 128  Q
    |||||||| ||||||||||   ||||||||||||||||||||| ||||||||||||||||||||| || ||||||  |||||||||||| | ||||||||    
T  11588551 aaactcctcgtttacactatttgacctaggacctacccgtatagacttcaacctaggaactcctatatctgagatcccatctcactatcttaatggtcag 11588650  T
Q  129 tcacaaccccagtgaactatcagacctaaac 159  Q
    | ||  ||| ||||| |||||||||||||||    
T  11588651 taactgccctagtgacctatcagacctaaac 11588681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 48797702 - 48797612
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcat 109  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||   |||||||||||||||||||||||| |||||| ||||    
T  48797702 atagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatctcat 48797612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 3290768 - 3290671
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| ||||| | |||||||||||||||||||   |||||||||||||||||||||||| |||||| |||| |||||    
T  3290768 atagctctcagcaaactcctcgttttcactatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatctcatttcact 3290671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 42782830 - 42782927
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| || || | |||||||||||||||||||   |||||||||||||||||||||||| |||||| ||||||||||    
T  42782830 atagctctcagcaaactcctcgtttgcaatatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatctcatctcact 42782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 7620155 - 7620251
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||| |||| |||| |||||| |||||||||| ||||||||   |||||||||||||||||||||||| ||||||  |||||||||    
T  7620155 atagctctcagcaaaatcctcgtttgcactaatgacctaggacttacccgtactaacttcaacctaggaactcctagatctgagatcccatctcact 7620251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 11560589 - 11560493
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||| ||||||||  |||||||||||||||||  ||||||||||||  |||||||||||||||||||| ||| ||| || ||||||||||    
T  11560589 atagctctcagtaaactcctcatttacactaaagacctacaacctacccgtattgacttcaacctaggaactcctggatctgatatctcatctcact 11560493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 14975507 - 14975603
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||| |||||| || |||| |||||| |||||||||||||||||||   |||||||||||||||||||||||| ||||||  |||||||||    
T  14975507 atagctctcaacaaacttctcgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatcccatctcact 14975603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 15404983 - 15405079
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||| |||||| || |||| |||||| |||||||||||||||||||   |||||||||||||||||||||||| ||||||  |||||||||    
T  15404983 atagctctcaacaaacttctcgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatcccatctcact 15405079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 30226160 - 30226256
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcac 114  Q
    |||||||||||||||||||| |||| ||||| | |||||||||||||||||||   |||||||||||||||||||||||| ||||||  ||||||||    
T  30226160 atagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatcccatctcac 30226256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 9566980 - 9567075
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| | |  | |||||||||||||||| ||||| ||||||  |||||||||    
T  9566980 tagctctcagcaaactcctcatttacactaaagacctaggacctacccatcttgagttcaacctaggaactcatagatctgagatcccatctcact 9567075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 4794672 - 4794574
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacct---aggaactcctagatttgagatatcatctcact 115  Q
    |||||||| | |||||||| |||||||||||||||||||||||||||||| |  ||||||||||   |||||||||||||| ||||||  |||||||||    
T  4794672 tagctctcggaaaactcctcgtttacactaaagacctaggacctacccgtcttgacttcaacctaggaggaactcctagatctgagatcgcatctcact 4794574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 143
Target Start/End: Complemental strand, 7586609 - 7586489
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctcat 122  Q
    |||||||||| |||| ||||||| || |||||||||||||||||||| || |||||||||||| ||||||||||| | ||||  ||||||||||||  |     
T  7586609 tctcagcaaaatcctcgtttacaacttaagacctaggacctacccgtctagacttcaacctagaaactcctagatctaagatcccatctcactatcctac 7586510  T
Q  123 ggtcagtcacaaccccagtga 143  Q
     |||| |||||||||| ||||    
T  7586509 agtcaatcacaacccctgtga 7586489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 23956983 - 23957051
Alignment:
Q  50 aagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||||||||| || |||||||||||||||||||||||| |||||| ||||||| |||||    
T  23956983 aagacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatctcatctccctatc 23957051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 24902211 - 24902279
Alignment:
Q  50 aagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||||||||| || |||||||||||||||||||||||| ||||||  ||||||||||||    
T  24902211 aagacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcactatc 24902279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 13455186 - 13455096
Alignment:
Q  29 gcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||| |||||||||  | ||| |||||||||||||| || |||||||||||||||||||||||| ||||||  ||||||||||||    
T  13455186 gcaaactcctcgtttacactttatgacttaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcactatc 13455096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 9894146 - 9894054
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||| |||  ||||||| || |||||||||||| |||||||||  |||||||||||||||||||||||| ||||||  |||||||||    
T  9894146 tctcagcaaattccaagtttacaacttaagacctaggacatacccgtattgacttcaacctaggaactcctagatctgagatcccatctcact 9894054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 10658457 - 10658505
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacc 66  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10658457 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacc 10658505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 314
Target Start/End: Original strand, 15438406 - 15438466
Alignment:
Q  254 agtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| ||||||    
T  15438406 agtcctaaacatgtatcacaaacgatacaagaaaggctcacaataaaggttctagacttgc 15438466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 24814001 - 24814085
Alignment:
Q  21 agctctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    ||||||||||||||| || ||||| | ||  |||||||||||||||||||||  |||||||||||||||||||||||| ||||||    
T  24814001 agctctcagcaaactactagtttaaaactctagacctaggacctacccgtatcaacttcaacctaggaactcctagatctgagat 24814085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 26132968 - 26132900
Alignment:
Q  50 aagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||| |||||||||||||  | |||||||||||||||||||||| |||||| |||||||||||||    
T  26132968 aagacctaagacctacccgtattgatttcaacctaggaactcctagatctgagatctcatctcactatc 26132900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 14984750 - 14984841
Alignment:
Q  23 ctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcac 114  Q
    |||||| |||||||| ||||| |||||| ||||||| |||||||||||   ||||||||||||||| |||||||| ||||||  ||||||||    
T  14984750 ctctcaacaaactccctgtttgcactaatgacctagaacctacccgtactgacttcaacctaggaattcctagatctgagatcccatctcac 14984841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 15414361 - 15414452
Alignment:
Q  23 ctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcac 114  Q
    |||||| |||||||| ||||| |||||| ||||||| |||||||||||   ||||||||||||||| |||||||| ||||||  ||||||||    
T  15414361 ctctcaacaaactccctgtttgcactaatgacctagaacctacccgtactgacttcaacctaggaattcctagatctgagatcccatctcac 15414452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 23296588 - 23296674
Alignment:
Q  30 caaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||| ||||| ||  ||||||||||||||||||| |  |||||||||||||||||||||||| ||||||  |||||||||    
T  23296588 caaactccttgcttacaactctagacctaggacctacccgtcttgacttcaacctaggaactcctagatctgagatcccatctcact 23296674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 10038807 - 10038712
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||| |||||||| | ||||||| || |||||||||||||| | ||| || ||||||||||| |||||||||||| ||||||  ||||||||||||    
T  10038807 tctcggcaaactcttcgtttacaacttaagacctaggacctgctcgtctagacttcaacctaagaactcctagatctgagatcccatctcactatc 10038712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 11628714 - 11628793
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagat 97  Q
    |||||||| ||||||||||| |||| ||||| | |||||||||||||||||||   |||||| |||||||||||||||||    
T  11628714 atagctcttagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcagcctaggaactcctagat 11628793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 15708252 - 15708342
Alignment:
Q  26 tcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||| |||||||| ||||||| ||  ||||||| |||||||||||||  |||| ||||||||||||||||||| ||||||  |||||||||    
T  15708252 tcagaaaactcctcgtttacaactctagacctacgacctacccgtattgacttgaacctaggaactcctagatctgagatcccatctcact 15708342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 23580031 - 23579941
Alignment:
Q  26 tcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||| ||||||| ||| | ||||||||||||||||| |  | ||||||||| |||||||||||| || ||| ||||||||||    
T  23580031 tcagcaaactcctcgtttacaactataaacctaggacctacccgtcttgaattcaacctaagaactcctagatctgggatctcatctcact 23579941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 26195537 - 26195445
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||| |||| ||||||| ||  |||||||||||||||| ||||  | ||||||||||||||||||| || ||||||  |||||||||    
T  26195537 tctcagcaaattcctcgtttacaactctagacctaggacctacctgtattaaattcaacctaggaactcctaaatctgagattccatctcact 26195445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 14687476 - 14687538
Alignment:
Q  53 acctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||| ||   |||||||||||||||||||||||| ||||||  |||||||||    
T  14687476 acctaggacctacccatactgacttcaacctaggaactcctagatctgagattccatctcact 14687538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 23174932 - 23174870
Alignment:
Q  51 agacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctca 113  Q
    ||||||||||| |||||||||  |||||||| ||||||||||||||| ||||||  |||||||    
T  23174932 agacctaggacttacccgtattgacttcaacataggaactcctagatctgagatcccatctca 23174870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 24049568 - 24049621
Alignment:
Q  62 ctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||  |||||||||||||||||||||||| ||||||  |||||||||    
T  24049568 ctacccgtattgacttcaacctaggaactcctagatctgagatcacatctcact 24049621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 4547852 - 4547800
Alignment:
Q  61 cctacccgtatatacttcaacctaggaactcctagatttgagatatcatctca 113  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||  |||||||    
T  4547852 cctacccgtatttacttcaacctaagaactcctagatctgagatcccatctca 4547800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 10251547 - 10251611
Alignment:
Q  51 agacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||||  |||||||| || |||||| ||||| ||||||  |||||||||    
T  10251547 agacctaggacctacccgtattgacttcaacataagaactcttagatctgagatcccatctcact 10251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 11406990 - 11406938
Alignment:
Q  62 ctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcac 114  Q
    ||||||||||  |||||||||||||||||||||||| ||||||  ||||||||    
T  11406990 ctacccgtattgacttcaacctaggaactcctagatctgagattccatctcac 11406938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 19353245 - 19353301
Alignment:
Q  59 gacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||  ||||||||| |||||||||||||| ||||||  |||||||||    
T  19353245 gacctacccgtattcacttcaaccgaggaactcctagatctgagattccatctcact 19353301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 26132857 - 26132803
Alignment:
Q  171 gatgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtag 226  Q
    |||||||||||||||||||| ||||||||  |||||||||| ||| ||||||||||    
T  26132857 gatgaagttaccttcaaaca-aacaactacaaccttgcttaaaagttttggtgtag 26132803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 31269083 - 31269044
Alignment:
Q  76 ttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||||| |||||| ||||||||||    
T  31269083 ttcaacctaggaactcctagatctgagatctcatctcact 31269044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 20588757 - 20588695
Alignment:
Q  53 acctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||| || |   ||||||||||| |||||||||||| |||||| ||||||||||    
T  20588757 acctaggacctactcgcactaacttcaacctaagaactcctagatctgagatctcatctcact 20588695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 7508564 - 7508605
Alignment:
Q  74 acttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||||||| ||||||  |||||||||    
T  7508564 acttcaacctaggaactcctagatctgagatcccatctcact 7508605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 10309572 - 10309480
Alignment:
Q  21 agctctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctca 113  Q
    |||||||||||||||||  ||||||| || |  ||||||   ||||||||||  |||| |||||| ||||||||||||||||||| ||||||||    
T  10309572 agctctcagcaaactccaagtttacaacttatcacctagacactacccgtattgactt-aacctaagaactcctagatttgagatctcatctca 10309480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 23057336 - 23057377
Alignment:
Q  74 acttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||| || ||||||||||||||||||||| ||||||||||    
T  23057336 acttcagccgaggaactcctagatttgagatctcatctcact 23057377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 5e-84; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 18 - 313
Target Start/End: Original strand, 26036884 - 26037181
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||  ||| |||||||    
T  26036884 tatagctctcagcaaactcatcgtttacactaaagacctaggacctacccgtatagacttcaacctaggaacttgtagatctgagatcccatttcactat 26036983  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacct-aaaca-caaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaag 215  Q
    |  ||||||||||||| |||| |||| |||| |||||| ||||| ||| || || |||||||||||||||||||| ||||||||||||||||| || ||     
T  26036984 catatggtcagtcacagcccctgtgacctattagaccttaaacaacaatcttaaagatgaagttaccttcaaacacaacaactaacaccttgcgtaaaat 26037083  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttg 313  Q
     || |||||||||| ||||||||| |||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| |||||||    
T  26037084 cttcggtgtagtacccaagagtataaaactcaacacacagtcctaaacatgtatcaaagacgatacaagaaaggctcacaataaaggttcgaaacttg 26037181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 18 - 321
Target Start/End: Complemental strand, 30605776 - 30605474
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||  | ||||| |||||||||||||||| |||||| ||||||||||||    
T  30605776 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacccatattgatttcaatctaggaactcctagatctgagatctcatctcactat 30605677  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacct-aaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaagg 216  Q
    |  ||||||| |||||||||  |||| ||||||||||| ||||||||||| || | ||||||||||||||||||  |||||||||||||||||||||||     
T  30605676 cctatggtcaatcacaacccatgtgacctatcagacctaaaacacaaact-aacggtgaagttaccttcaaaca-tacaactaacaccttgcttacaagc 30605579  T
Q  217 tttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgctt 316  Q
    |||||||||||||||||| | ||  |||| || |||||||||| |||||||| |||| |||  |||||||||||||||||||||||| |||||||||| |    
T  30605578 tttggtgtagtacacaagtgaatacaacttaacacacagtccttaacatgtatcacaaacgacacaagaaaggctcacaataaaggtactaaacttgcat 30605479  T
Q  317 caaca 321  Q
    |||||    
T  30605478 caaca 30605474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 321
Target Start/End: Complemental strand, 26329299 - 26328996
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||  |||||||||||    
T  26329299 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcactat 26329200  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaa--cacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaag 215  Q
    |  |   |||  |||| |||| ||| | ||| ||||  |||   |||||| ||| |||||||||||| ||||||  || |||||  |||||||||| |||    
T  26329199 ccaacaatcaaccacagcccctgtg-attattagactaaaaacaacaaacacaaagatgaagttaccatcaaac--aaaaactacaaccttgcttaaaag 26329103  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgc 314  Q
     |||||||||| ||||||| || |  ||||||| ||||||||||||||||||| | || ||| ||||||||||||||||||| |||||| ||||||||||    
T  26329102 ctttggtgtagaacacaagtgtttacaactcaacacacagtcctaaacatgtatcccaaacgatacaagaaaggctcacaataaaaggtactaaacttgc 26329003  T
Q  315 ttcaaca 321  Q
     ||||||    
T  26329002 atcaaca 26328996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 18 - 321
Target Start/End: Original strand, 23623951 - 23624255
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||||||  | |||||||||||||||| |||||||||||| |||||||||| |    
T  23623951 tatagctctcagcaaactcctcatttacactaaatacctaggacctacccgtattgatttcaacctaggaactcttagatttgagatctcatctcacttt 23624050  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagaccta-aac-acaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaag 215  Q
    |  || || | |||||||||| |||| |||||||||  | ||| |||||| ||| |||||||||||||||||||  || |||||  |||||||||| |||    
T  23624051 cctatagttaatcacaacccctgtgatctatcagactaacaacaacaaacacaaagatgaagttaccttcaaac--aaaaactacaaccttgcttaaaag 23624148  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgc 314  Q
     |||   |||| |||||||||| |  ||||| | |||||||||| | |||||| |||| ||| ||||||||||||||||||| |||||| ||| ||||||    
T  23624149 ctttttcgtagaacacaagagtttacaactctacacacagtccttagcatgtatcacaaacgatacaagaaaggctcacaataaaaggtactagacttgc 23624248  T
Q  315 ttcaaca 321  Q
     ||||||    
T  23624249 atcaaca 23624255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 22404846 - 22404704
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  22404846 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 22404747  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||||||||||||| |||| |||| |||||||||||||||    
T  22404746 cctaatggtcagtcacagcccctgtgacctatcagacctaaac 22404704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 23420646 - 23420503
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||  ||||||||| | ||||||||||||||||||||| |||||||||||||||||  ||||| ||||||  |||||||||||    
T  23420646 atagctctcagcaaactcctcatttacactatatgacctaggacctacccgtatagacttcaacctaggaactgttagatctgagatcccatctcactat 23420547  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaaca 160  Q
     || ||||||||||||| |||| |||| ||||||||||||||||    
T  23420546 cctaatggtcagtcacagcccctgtgacctatcagacctaaaca 23420503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 22246436 - 22246294
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| ||||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||   ||||  |||||||||||    
T  22246436 atagctctcagcaaactcctcgtttacactatttgacctaggacctacccgtatagacttcaacctaggaactcctagatcatagatcacatctcactat 22246337  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||||||||||||  ||||||||| |||||||||||||||    
T  22246336 cctaatggtcagtcactgccccagtgacctatcagacctaaac 22246294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 24189937 - 24190079
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||| ||||| ||||||  |||||||||||    
T  24189937 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcatagatctgagatcccatctcactat 24190036  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || || |||||||||  ||| ||||| |||||||||||||||    
T  24190037 cctaatagtcagtcactgccctagtgacctatcagacctaaac 24190079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 321
Target Start/End: Original strand, 18221185 - 18221487
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||| |||||| || ||||||||||||||||||||| ||||| ||||  | |||||||||||||||||||||| ||||||  ||||||||||||    
T  18221185 atagctctcaccaaacttctcgtttacactaaagacctaggagctaccagtattgagttcaacctaggaactcctagatctgagatcccatctcactatc 18221284  T
Q  119 tcatggtcagtcacaaccccagtgaactatcagacctaaa--cacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaagg 216  Q
      || |||| |||| || || |||| | |||| ||  |||   |||||| ||| |||||||||||||||||  |||| |||||  || || |||| |||     
T  18221285 ctatagtcaatcacgactcctgtgatccatcaaactaaaaacaacaaacacaaagatgaagttaccttcaa--agaaaaactacaacttttcttaaaagc 18221382  T
Q  217 tttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgct 315  Q
    |||   |||  |||||||||| || ||||| | ||||||||||||||||||| | || | | |||||||||| |||||||| |||||| ||||||||||     
T  18221383 tttatcgtaaaacacaagagtttc-aactctacacacagtcctaaacatgtatcgcaaatgatacaagaaagactcacaataaaaggtactaaacttgca 18221481  T
Q  316 tcaaca 321  Q
    ||||||    
T  18221482 tcaaca 18221487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 247
Target Start/End: Complemental strand, 9422547 - 9422371
Alignment:
Q  73 tacttcaacctaggaactcctagatttgagatatcatctcactatc-tcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaagg 171  Q
    |||||||||||| |||||||||||| ||||||  |||||||||||| | ||||||||||| | |||| |||| |||| ||||||||||  |||| ||| |    
T  9422547 tacttcaacctatgaactcctagatctgagatcccatctcactatcctaatggtcagtcatagcccctgtgacctattagacctaaaccaaaacacaaag 9422448  T
Q  172 atgaagttaccttcaaaca-gaacaactaacaccttgctt-acaaggtttggtgtagtacacaagagtatcaaactca 247  Q
    ||||||||| |||||||||  |||||||||||||||| || ||||  || ||||||||||||||||||||||||||||    
T  9422447 atgaagttagcttcaaacacaaacaactaacaccttgtttcacaa-cttcggtgtagtacacaagagtatcaaactca 9422371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 322
Target Start/End: Original strand, 13338665 - 13338966
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||| |||||||||||||||| |||||||||||||||||||||| |||| ||||  | ||| |||||||||||||||||| |||||| ||||||||||||    
T  13338665 tataactctcagcaaactcctcgtttacactaaagacctaggacataccggtattgatttctacctaggaactcctagatctgagatctcatctcactat 13338764  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
    |  |  ||||  ||||||||  ||| | ||||||||  ||| | ||||  ||   |||||||||||||||||| ||||||||  ||||| ||||  || |    
T  13338765 cctacagtcaaccacaacccttgtg-attatcagactaaaaaataaac-aaacagtgaagttaccttcaaaca-aacaactacaaccttacttaacagct 13338861  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgctt 316  Q
    |||| |||| |||||||||| |  ||||||| |||||||||| |||||||| || |   | || ||||||| |||||||| |||||| |||||||||| |    
T  13338862 ttggcgtagcacacaagagtttacaactcaaaacacagtccttaacatgtatca-aactgatataagaaagactcacaataaaaggtactaaacttgcat 13338960  T
Q  317 caacac 322  Q
    ||||||    
T  13338961 caacac 13338966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 20741020 - 20740925
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||| |||||| ||||||||||    
T  20741020 tagctctcagcaaactcctcgtttacactaaagacctaggacctatccgtcttgacttcaacctaggaactcctagatctgagatctcatctcact 20740925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 20845875 - 20845740
Alignment:
Q  23 ctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctca 121  Q
    |||||||||||||||| |||||||||  | |||||||||||||||||| || |||||||||||||||||||||||| |||||| | |||||||||||  |    
T  20845875 ctctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcttatctcactatccta 20845776  T
Q  122 tggtcagtcacaa-ccccagtgaactatcagaccta 156  Q
    |||| |||||||| |||| |||| ||||||||||||    
T  20845775 tggtgagtcacaaccccctgtgatctatcagaccta 20845740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 22252126 - 22251984
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||| |||||||||  ||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| | ||||   |||||| |||    
T  22252126 atagctctcaacaaactcctcatttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatcttagatcctatctcattat 22252027  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||||||||||||  ||||||||| |||||||||||||||    
T  22252026 cctaatggtcagtcactgccccagtgacctatcagacctaaac 22251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 13735056 - 13734958
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||||||| |||||||||  | |||||||||||||||||| || |||||||||||||||||||||||| ||||||  ||||||||||||    
T  13735056 agctctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcactatc 13734958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 20498238 - 20498141
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| ||||| | |||||||||||||||||||   |||||||||||||||||||||||| |||||| ||||||||||    
T  20498238 atagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatctcatctcact 20498141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 22184680 - 22184583
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||| ||  | |||||||||||||||||||||| ||||||  ||||||||||||    
T  22184680 agctctcagcaaactcctcgtttacacttaagacctatgacctacccgcattgatttcaacctaggaactcctagatctgagatcccatctcactatc 22184583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 7897999 - 7897903
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||   |||||||||||||||||| ||||| ||||||  |||||||||    
T  7897999 atagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcttagatctgagatcccatctcact 7897903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 20714816 - 20714721
Alignment:
Q  24 tctcagcaaactccttgtttacacta-aagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    ||||||||||||||| |||||||  | ||||||||||||||||||||||  | |||||||||||||||||||||| |||||| |||||||||||||    
T  20714816 tctcagcaaactcctcgtttacaacacaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatttcatctcactatc 20714721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 118
Target Start/End: Complemental strand, 13942077 - 13941982
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    ||||||||||||||| ||||||| || || ||||||||||||||||| || |||||||||||||||||||||||| ||||||  ||||||| ||||    
T  13942077 tctcagcaaactcctcgtttacaacttaaaacctaggacctacccgtctacacttcaacctaggaactcctagatctgagatcccatctcattatc 13941982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 17920866 - 17920783
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    |||||||||||||||||| |||| |||| | |||||||||||||||||||   |||||||||||||||||||||||| ||||||    
T  17920866 agctctcagcaaactcctcgtttgcacttatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagat 17920783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 26183319 - 26183222
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||| || |||| ||||| | ||||||| |||||||||||   |||||||||||||||||||||||| ||||||  |||||||||    
T  26183319 atagctctcagcaaacttctcgtttgcactatatgacctagaacctacccgtactgacttcaacctaggaactcctagatctgagatcccatctcact 26183222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 22184528 - 22184409
Alignment:
Q  176 agttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacaga 275  Q
    ||||||||||||||| |||| |||  |||||||||||||| |||||||||| |||||||||| |  ||||||| | ||| |||| |||||||| || |||    
T  22184528 agttaccttcaaacaaaaca-ctacgaccttgcttacaagctttggtgtagcacacaagagtttacaactcaataaacaatccttaacatgtatca-aga 22184431  T
Q  276 cggtacaagaaaggctcacaat 297  Q
     | || ||||||||||||||||    
T  22184430 tgataaaagaaaggctcacaat 22184409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 9522636 - 9522705
Alignment:
Q  50 aagacctaggacctacccgtatata----cttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||  |||||||||    
T  9522636 aagacctaggacctacccgtatatattgacttcaacctaggaactcctagatctgagatcccatctcact 9522705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 23758132 - 23758047
Alignment:
Q  228 acacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
    |||||||||||||||||||| | | ||||||||||||| ||| |||||||| |||||||||| ||||||  |||||||||| ||||||    
T  23758132 acacaagagtatcaaactcacacaaacagtcctaaacaagtatcacagacgatacaagaaagactcaca--aaaggttctagacttgc 23758047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 23823588 - 23823503
Alignment:
Q  228 acacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
    |||||||||||||||||||| | | ||||||||||||| ||| |||||||| |||||||||| ||||||  |||||||||| ||||||    
T  23823588 acacaagagtatcaaactcacacaaacagtcctaaacaagtatcacagacgatacaagaaagactcaca--aaaggttctagacttgc 23823503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 17661461 - 17661399
Alignment:
Q  53 acctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||| |||  |||||||||||||||||||||||| ||||||  |||||||||    
T  17661461 acctaggacctacccatattgacttcaacctaggaactcctagatctgagattccatctcact 17661399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 22130918 - 22130877
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggac 61  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  22130918 tagctctcagcaaactcctcgtttacactaaagacctaggac 22130877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 321
Target Start/End: Complemental strand, 22082575 - 22082471
Alignment:
Q  217 tttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgctt 316  Q
    |||||||||||||||| |||| |  ||||||| | |||||| | |||||||| |||| |||  |||||||||| ||| ||||||||| ||||| |||| |    
T  22082575 tttggtgtagtacacatgagtttacaactcaacatacagtcattaacatgtatcacaaacgacacaagaaaggttcataataaaggtactaaatttgcat 22082476  T
Q  317 caaca 321  Q
    |||||    
T  22082475 caaca 22082471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 11756257 - 11756211
Alignment:
Q  51 agacctaggacctacccgtatatacttcaacctaggaactcctagat 97  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||    
T  11756257 agacctaggacctacccgtattgacttcaacctaggaactcttagat 11756211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 25105505 - 25105451
Alignment:
Q  19 atagctctcagcaaactccttgtttacacta-aagacctaggacctacccgtata 72  Q
    |||||| ||||||||||||| |||||||||| | |||||||||||||||||||||    
T  25105505 atagctttcagcaaactcctcgtttacactatatgacctaggacctacccgtata 25105451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 25164598 - 25164544
Alignment:
Q  19 atagctctcagcaaactccttgtttacacta-aagacctaggacctacccgtata 72  Q
    |||||| ||||||||||||| |||||||||| | |||||||||||||||||||||    
T  25164598 atagctttcagcaaactcctcgtttacactatatgacctaggacctacccgtata 25164544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 115
Target Start/End: Original strand, 22979867 - 22979917
Alignment:
Q  65 cccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||  |||||||||||||||||| ||||| |||||| ||||||||||    
T  22979867 cccgtattgacttcaacctaggaactcttagatctgagatctcatctcact 22979917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 24117702 - 24117766
Alignment:
Q  51 agacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||||  |||| |||||||||| | || ||| ||||||  |||||||||    
T  24117702 agacctaggacctacccgtattgactttaacctaggaatttcttgatctgagatcccatctcact 24117766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 15162573 - 15162275
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||| |||||| ||||||| | |||||||||||||||| || ||||||||||||| |||||||||||||||||||| ||||||||||  ||||||| |||    
T  15162573 tataactctcaacaaactcttcgtttacactaaagaccgagaacctacccgtataaacttcaacctaggaactcctcgatttgagatcccatctcaatat 15162474  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacct-aaacacaaactc-aaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaa 214  Q
    |   ||||||||||||||||| |||| ||||||||||| |||||||||| | || | |||||||||||||||||| |||||||| ||||||| || ||||    
T  15162473 cctttggtcagtcacaacccctgtgacctatcagacctcaaacacaaacacaaaagttgaagttaccttcaaacaaaacaactagcaccttgtttcacaa 15162374  T
Q  215 ggtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
      || ||||||||||||||||||||||||||||| |||||||||||| |||||| |||| ||| ||||||||||| ||||| ||||||||||||||||||    
T  15162373 -cttcggtgtagtacacaagagtatcaaactcaacacacagtcctaagcatgtatcacaaacgatacaagaaaggatcacactaaaggttctaaacttgc 15162275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 314
Target Start/End: Original strand, 10724333 - 10724630
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||||  |||||| ||||||||||  ||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  10724333 tatagctctcagcaaactcctcatttacattaaagacctaaaacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 10724432  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacct-aaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaag 215  Q
    |  |||||||||||||||||| |||| ||||||||||| ||||||||||  || | |||||||  ||||||||| |||||||| ||||| | || ||||     
T  10724433 cctatggtcagtcacaacccctgtgacctatcagacctcaaacacaaacaaaacggtgaagttttcttcaaacaaaacaactagcacctggtttcacaa- 10724531  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
     ||  |||||||||||||||||||||||||||| ||||||||||||| ||||| |||| | | | |||||||||||||| |||||||| ||||||||||    
T  10724532 cttcagtgtagtacacaagagtatcaaactcaacacacagtcctaaatatgtatcacaaatgatgcaagaaaggctcactataaaggtcctaaacttgc 10724630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 314
Target Start/End: Original strand, 10938102 - 10938399
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||||  |||||| ||||||||||  ||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  10938102 tatagctctcagcaaactcctcatttacattaaagacctaaaacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 10938201  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacct-aaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaag 215  Q
    |  |||||||||||||||||| |||| ||||||||||| ||||||||||  || | |||||||  ||||||||| |||||||| ||||| | || ||||     
T  10938202 cctatggtcagtcacaacccctgtgacctatcagacctcaaacacaaacaaaacggtgaagttttcttcaaacaaaacaactagcacctggtttcacaa- 10938300  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
     ||  |||||||||||||||||||||||||||| ||||||||||||| ||||| |||| | | | |||||||||||||| |||||||| ||||||||||    
T  10938301 cttcagtgtagtacacaagagtatcaaactcaacacacagtcctaaatatgtatcacaaatgatgcaagaaaggctcactataaaggtcctaaacttgc 10938399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 10722060 - 10722271
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctc 120  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||      
T  10722060 agctctcaacaaactcctcgtttacacttaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatctcatctcactatcct 10722159  T
Q  121 atggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaaggttt 219  Q
    ||||| | ||||| || |  ||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||| || ||||  |||    
T  10722160 atggtgattcacagccactatgacctatcagacctaaacacaaactcaataatgaagttaccttcaaaca-aacaactagcaccttgtttcacaa-cttt 10722257  T
Q  220 ggtgtagtacacaa 233  Q
    ||||||||||||||    
T  10722258 ggtgtagtacacaa 10722271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 10935829 - 10936040
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctc 120  Q
    |||||||| ||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||      
T  10935829 agctctcaacaaactcctcgtttacacttaagacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatctcatctcactatcct 10935928  T
Q  121 atggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaaggttt 219  Q
    ||||| | ||||| || |  ||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||| || ||||  |||    
T  10935929 atggtgattcacagccactatgacctatcagacctaaacacaaactcaataatgaagttaccttcaaaca-aacaactagcaccttgtttcacaa-cttt 10936026  T
Q  220 ggtgtagtacacaa 233  Q
    ||||||||||||||    
T  10936027 ggtgtagtacacaa 10936040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 21 - 207
Target Start/End: Original strand, 21478184 - 21478370
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    |||||||||||||||||| |||||||||  | |||||||||||||||||| || |||||||||||||||||||||||| ||||||  ||||||||||||     
T  21478184 agctctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcactatcc 21478283  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttg 207  Q
     ||||||||||||| |||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||| ||||| || |||||||    
T  21478284 tatggtcagtcacagcccctgtgacctatcagacctaaacacaaactcaatgatgaagttaacttcaaaca-aacaaatagcaccttg 21478370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 33746037 - 33746208
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||| |||||| ||||||||||||    
T  33746037 tatagctctcagtaaattcctcgtttacactaaagacctaggacctacccgtattaatttcaacctaggaacttctagatctgagatctcatctcactat 33746136  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca 190  Q
    |  |||||||||||||||||  |||| |||||| ||||||||||||||  || | ||||||||||||||||||    
T  33746137 cctatggtcagtcacaacccgtgtgacctatcaaacctaaacacaaac-aaacggtgaagttaccttcaaaca 33746208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 9069023 - 9069166
Alignment:
Q  22 gctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctca 121  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||  | ||||| |||||||||||||||| |||||| |||||||||||||  |    
T  9069023 gctctcagcaaactcctcgtttacactaaagatctaggacctacccgtattgatttcaatctaggaactcctagatctgagatctcatctcactatccta 9069122  T
Q  122 tggtcagtcacaaccccagtgaactatcagacctaaacacaaac 165  Q
    ||||||||||||||| | |||| |||||||||||||||||||||    
T  9069123 tggtcagtcacaacctctgtgacctatcagacctaaacacaaac 9069166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 25116900 - 25117042
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||| || |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  25116900 atagctctcagcaaacttctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 25116999  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || |||||||||||||||||| |||| |||||||| ||||||    
T  25117000 cctaatggtcagtcacaacccctgtgacctatcagatctaaac 25117042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 8163862 - 8164006
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctc 120  Q
    ||||| |||||||||||| ||||||  | | |||||||||||||||||| || |||||||||||||||||||||||| ||||||  ||||||||||||      
T  8163862 agctcccagcaaactcctcgtttacctttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcactatcct 8163961  T
Q  121 atggtcagtcacaaccccagtgaactatcagacctaaacacaaac 165  Q
    |||||||||||||||||| |||| |||| ||||||||||| ||||    
T  8163962 atggtcagtcacaacccctgtgacctattagacctaaacaaaaac 8164006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 33899073 - 33898931
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||| |||||||| || |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||    
T  33899073 atagctcttagcaaacttctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctaggtttgagatctcatctcactat 33898974  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||||||||||||| |||| ||||  ||| ||||||||||    
T  33898973 cctaatggtcagtcacatcccctgtgacttattagacctaaac 33898931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 300
Target Start/End: Complemental strand, 19183766 - 19183488
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| | |||| || | |||||||||||||||||||||| ||||||  |||||||||||    
T  19183766 tatagctctcaacaaacttcttgtttacactaaagacctaggacccatccgtctagatttcaacctaggaactcctagatctgagatcccatctcactat 19183667  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagac-ctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaagg 216  Q
    |  | |||||  |||| |||  ||| | ||||||||   ||||||||||  || | |||||||||||||||||| ||||||||  ||||||||||||||     
T  19183666 cctacggtcaaccacagcccttgtg-attatcagactaaaaacacaaac-aaatggtgaagttaccttcaaaca-aacaactacgaccttgcttacaaga 19183570  T
Q  217 tttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaa 300  Q
    || | ||||| ||| | |||| |  ||||||| | |||||||| | |||||| || ||| | ||||||||||||||||||||||    
T  19183569 ttcgatgtagcaca-acgagtttacaactcaacaaacagtccttagcatgtatca-agatgatacaagaaaggctcacaataaa 19183488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 18618197 - 18618059
Alignment:
Q  23 ctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc-tc 120  Q
    |||||| ||||||||| |||||||||| | |||||||||| ||||||| || ||||||||||||| ||| |||||| ||||||  |||||||||||| |     
T  18618197 ctctcaacaaactcctcgtttacactatatgacctaggacatacccgtctagacttcaacctagggactactagatctgagatcccatctcactatccta 18618098  T
Q  121 atggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  18618097 atggtcagtcacaacccctgtgaactatcagacctaaac 18618059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 28019379 - 28019568
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | |||||||||| |||||||||| ||||||||||||||||||||| ||||| |||  ||||||| |||    
T  28019379 atagctctcagcaaactcctcgtttacactatatgacctaggacatacccgtatagacttcaacctaggaactcctatatttgtgatcccatctcattat 28019478  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttg 207  Q
     || ||||||||| |   ||||||||| ||||||||||||||| |||| | ||| | |||||||||||| ||||  |||||||| |||||||    
T  28019479 cctaatggtcagttattgccccagtgacctatcagacctaaac-caaaataaagta-gaagttaccttccaacacaaacaactagcaccttg 28019568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 23400279 - 23400178
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||  |||||||||||    
T  23400279 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgatatcccatctcactat 23400180  T
Q  118 ct 119  Q
    ||    
T  23400179 ct 23400178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 25354716 - 25354624
Alignment:
Q  23 ctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||   |||||||||||||||||||||||||||||||  |||||||||    
T  25354716 ctctcagcaaactccttgtttgcactaatgacctaggacctacccgtactgacttcaacctaggaactcctagatttgagatcacatctcact 25354624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 15700396 - 15700222
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| |||  | |||||||||||||||||||||| | ||||  |||||||||||    
T  15700396 tatagctttcagcaaactcctcgtttacactaaagacctaggacctacccatattgatttcaacctaggaactcctagatctcagatcccatctcactat 15700297  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaa--cacaaactcaaggatgaagttaccttcaaaca 190  Q
    |  || ||||  |||| ||||  ||| |||||||||  |||   ||||||  || ||||||||||||||||||||    
T  15700296 cctatagtcaaccacatcccctatgatctatcagactaaaaacaacaaacaaaaagatgaagttaccttcaaaca 15700222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 143
Target Start/End: Complemental strand, 13399386 - 13399264
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctc 120  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||| || | |||||||||||||||||||||| ||||||  ||||||||||||      
T  13399386 agctctcagcaaactcctcgtttacacttaagacttaggacctacccgtctagatttcaacctaggaactcctagatctgagattccatctcactatcct 13399287  T
Q  121 atggtcagtcacaaccccagtga 143  Q
    |  |||| |||||||||| ||||    
T  13399286 acagtcaatcacaacccctgtga 13399264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 10190961 - 10191103
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||| ||||||||||| |||||||||| | ||| |||||| ||| |||||| |||||||||||| ||||||||||| ||||||  |||||||||||    
T  10190961 atagctctaagcaaactcctcgtttacactatatgacataggacttactcgtatagacttcaacctagaaactcctagatctgagattccatctcactat 10191060  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || |||||||| |||| |||| || | |||||||||||||||    
T  10191061 cctaatggtcagccacagcccctgttacctatcagacctaaac 10191103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 296
Target Start/End: Original strand, 19659515 - 19659788
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    |||||||||||||||||| |||||||||  | ||||||||||||||  || || |||||||||||||||||||||||| ||||||  ||||||||||||     
T  19659515 agctctcagcaaactcctcgtttacactttatgacctaggacctacatgtttagacttcaacctaggaactcctagatctgagatcccatctcactatcc 19659614  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgcttacaaggtt 218  Q
     |  ||||| |||||||||  ||| |||| | | ||||| ||||||  || |  |||||||||||||||||  ||||||||  |||||||||  ||| ||    
T  19659615 tacagtcagacacaacccctatgacctattata-ctaaaaacaaac-aaacggcgaagttaccttcaaacacaaacaactacaaccttgcttcaaagctt 19659712  T
Q  219 tggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaa 296  Q
    |||||||| ||| | |||| |  ||  ||| |||||||||| | ||||||||| ||| | || |||||||||||||||    
T  19659713 tggtgtagcaca-atgagtttacaatccaacacacagtccttaccatgtacca-agatgatataagaaaggctcacaa 19659788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 23541318 - 23541414
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||   |||||||||  |||||  |||||| |||||| ||||||||||    
T  23541318 atagctctcagcaaactcctcgtttgcactaaagacctaggacctacccgtactgacttcaacccgggaacaactagatctgagatctcatctcact 23541414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 16383965 - 16384107
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||| ||||||||| |||||||||| | ||||||||||||||||||||  ||||||||||| |||||||||||| | ||||     ||||||||    
T  16383965 atagctctcaacaaactcctcgtttacactatatgacctaggacctacccgtattaacttcaacctatgaactcctagatctaagatcatgcctcactat 16384064  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || |||||||||||||  | | |||| |||||||||||||||    
T  16384065 cctaatggtcagtcacagtctctgtgacctatcagacctaaac 16384107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 10198331 - 10198239
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||  ||||||| ||  ||||||||||||||||||| |  |||||||||||||||||||||||| |||||| ||||||||||    
T  10198331 tctcagcaaactccaagtttacaactctagacctaggacctacccgtcttgacttcaacctaggaactcctagatctgagatctcatctcact 10198239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 19894888 - 19894792
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| ||||  ||||| |||||||||||||||||||   |||||||||||| |||||||| || ||||||  |||||||||    
T  19894888 atagctctcagcaaactcctcgtttgaactaatgacctaggacctacccgtactgacttcaacctagaaactcctaaatctgagatcccatctcact 19894792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 24143209 - 24143305
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||| |||| |||| |||||| |||||||||||||||||||   |||| |||||| |||||||||||| ||||||  |||||||||    
T  24143209 atagctctcagcaaaatcctcgtttgcactaatgacctaggacctacccgtactgactttaacctatgaactcctagatctgagatcccatctcact 24143305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 46741834 - 46741763
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaact 90  Q
    |||||||||||||||||||| |||| |||| | ||||||||||||||||||||  |||||||||||||||||    
T  46741834 atagctctcagcaaactcctcgtttgcacttatgacctaggacctacccgtattgacttcaacctaggaact 46741763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 11905168 - 11905246
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagat 97  Q
    ||||||||||| ||||| || |||||||||||||||||| ||| |||| ||||  ||||||||||||||||||||||||    
T  11905168 atagctctcagtaaacttctcgtttacactaaagacctatgacttacctgtattgacttcaacctaggaactcctagat 11905246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 32861727 - 32861808
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    ||||| ||||||||| ||||| | || |||||||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  32861727 tctcaacaaactcctcgtttataacttaagacctaggacctactcgtctagacttcaacctaggaactcctagatttgagat 32861808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 50907932 - 50908011
Alignment:
Q  26 tcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    ||||||||||||| ||||||| ||  |||||||||||||||||||||  ||||||||||||||||||||| || ||||||    
T  50907932 tcagcaaactcctcgtttacaactctagacctaggacctacccgtattgacttcaacctaggaactcctaaatctgagat 50908011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 11325230 - 11325133
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||| ||||||||| |||| ||||| | |||||||||||||||||||   |||||||||||||||||| ||||| | ||||  |||||||||    
T  11325230 atagctctcaacaaactcctcgtttgcactatatgacctaggacctacccgtactaacttcaacctaggaactcgtagatctaagattccatctcact 11325133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 22555044 - 22555142
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa--gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| || | ||||| |  ||||||||||||| |||||   |||||||||||||||||| ||||| ||||||  |||||||||    
T  22555044 atagctctcagcaaactcctcgtatgcactatatggacctaggacctatccgtactgacttcaacctaggaactcgtagatctgagatcccatctcact 22555142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 16655419 - 16655327
Alignment:
Q  24 tctcagcaaactccttgtttac-actaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||  |||| |||  ||||||||||||||||| | |  | |||||||||||||||||||||| ||||||  |||||||||    
T  16655419 tctcagcaaactccttagttacgactttagacctaggacctacccatcttgagttcaacctaggaactcctagatctgagatcccatctcact 16655327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 300
Target Start/End: Original strand, 15622573 - 15622789
Alignment:
Q  76 ttcaacctaggaactcctagatttgagatatcatctcactatctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatga 175  Q
    |||| ||||||||||||||||| ||||||  ||||||||||||  |   ||| ||||| |||| ||||  |||||||  |||||||| |   || | |||    
T  15622573 ttcatcctaggaactcctagatctgagatcccatctcactatcctacaatcaatcacagcccctgtgat-tatcagatttaaacacaca---aatggtga 15622668  T
Q  176 agttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacaga 275  Q
    ||||||||||||||| ||||||||  |||||||||| ||| |||||||||| ||| | |||| |  |||| || | |||||||| |||||||| || |||    
T  15622669 agttaccttcaaaca-aacaactacaaccttgcttaaaagctttggtgtagcaca-atgagt-tacaactaaacaaacagtccttaacatgtatca-aga 15622764  T
Q  276 cggtacaagaaaggctcacaataaa 300  Q
     | |||||| |||||||||||||||    
T  15622765 agatacaagcaaggctcacaataaa 15622789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 15700168 - 15700117
Alignment:
Q  270 cacagacggtacaagaaaggctcacaataaaggttctaaacttgcttcaaca 321  Q
    |||| ||| ||||||||||||||||||||| ||| |||||||||| ||||||    
T  15700168 cacaaacgatacaagaaaggctcacaataagggtactaaacttgcatcaaca 15700117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 2679957 - 2680013
Alignment:
Q  56 taggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctc 112  Q
    |||||||||| ||||   |||||||||||||| ||||||||| |||||| |||||||    
T  2679957 taggacctactcgtactgacttcaacctaggagctcctagatctgagatctcatctc 2680013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 18064290 - 18063998
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||  | |||||||||||||||||||||| |||||| ||||||||||||    
T  18064290 tatagctctcaacaaactcctcgtttacactaaagacctaggacctaaccgtattgatttcaacctaggaactcctagatctgagatctcatctcactat 18064191  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaagg 216  Q
    || ||||||||||||| |||| | || |||| ||||||||  |||||| ||| | ||||||||||||| |||| ||||||||||||| || || ||||      
T  18064190 ctaatggtcagtcacagcccctgcgacctataagacctaa--acaaacacaaagttgaagttaccttcgaaca-aacaactaacaccgtgtttcacaa-c 18064095  T
Q  217 tttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataa-aggttctaaacttgc 314  Q
    |||||||||||||||| ||||||||||||| | ||||| ||||||||| ||| |||| ||| |||||| ||||  |||||||| |||||||||||||||    
T  18064094 tttggtgtagtacacatgagtatcaaactc-acacacaatcctaaacaagtagcacaaacgatacaag-aaggaacacaataagaggttctaaacttgc 18063998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 286
Target Start/End: Complemental strand, 18034980 - 18034715
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||| |||||||||||||||  ||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||  |||||||||||    
T  18034980 tataggtctcagcaaactcctcatttacaccaaagacctaggacctacccgtatctatttcaacctaggaactcctagatctgagatcccatctcactat 18034881  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaag 215  Q
     || |||||||||||||||||| | || |||||||||||||  |||||| ||| | |||||||||||||||||| ||||||||||||| || || | ||     
T  18034880 cctaatggtcagtcacaacccctgcgacctatcagacctaa--acaaacacaaagttgaagttaccttcaaaca-aacaactaacaccgtgtttcataac 18034784  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaa 286  Q
    | ||||||||||||||| ||||||||||||| | ||||| ||||||||| ||| |||| ||| ||||||||    
T  18034783 g-ttggtgtagtacacatgagtatcaaactc-acacacactcctaaacaagtatcacaaacgatacaagaa 18034715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 321
Target Start/End: Original strand, 28051210 - 28051515
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||||||||| |||||||| |||| ||||  | |||||||||||||||||||||| |||||| ||||||||||||    
T  28051210 tatagctctcagcaaactcctcgtttacactaaaggcctaggacatacctgtattgatttcaacctaggaactcctagatctgagatctcatctcactat 28051309  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaa--cacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaag 215  Q
    |  || || |||||||||||| |||| |||||||||  |||   |||||| ||| |||||||||||||||||||| ||||||||  ||| | |||   ||    
T  28051310 cctatagttagtcacaacccctgtgatctatcagactaaaaacaacaaacacaaagatgaagttaccttcaaaca-aacaactacaaccgtacttcagag 28051408  T
Q  216 gtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgc 314  Q
     ||| | |||||||||| ||||||  ||||||| |||||||||| |||||||| |||| |||  |||||||||||||||||| ||||||  |||||||||    
T  28051409 cttttgagtagtacacatgagtatacaactcaacacacagtccttaacatgtatcacaaacgacacaagaaaggctcacaataaaaggtaataaacttgc 28051508  T
Q  315 ttcaaca 321  Q
     ||||||    
T  28051509 atcaaca 28051515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 285
Target Start/End: Original strand, 44452555 - 44452825
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | |||| | |||||||||||||| |||||||||||||||||||||||| ||||||  ||||||| |||    
T  44452555 atagctctcagcaaactcctcgtttacactatatgacccatgacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcattat 44452654  T
Q  118 c-tcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaa 214  Q
    | | ||||||||||||||||||  ||| |||||||||||||||  |||| ||| ||||||||||||||||||||  |||||||||||||||| || ||||    
T  44452655 cgtaatggtcagtcacaacccctatgacctatcagacctaaaccaaaacacaaagatgaagttaccttcaaacacaaacaactaacaccttgtttcacaa 44452754  T
Q  215 ggtttggtgtagtacacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaaga 285  Q
      || |||||||||||||||||||||||||||| | | ||| | ||||||| ||| |||||||| |||||||    
T  44452755 -cttcggtgtagtacacaagagtatcaaactcacacaaacaattctaaacaagtatcacagacgatacaaga 44452825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 300
Target Start/End: Complemental strand, 17042838 - 17042558
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||  | ||||||| |||||||||||||| ||||||  |||||||||||    
T  17042838 tatagctctcaacaaactcctcgtttaaactaaagacctaggacctacccgtattgatttcaacccaggaactcctagatctgagatcccatctcactat 17042739  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
    |  ||||||||| ||| |||| |||| |||||||||||||||||||||  || | |||||||||||||||||| |  | |||||||| |||||   || |    
T  17042738 cctatggtcagtgacagcccctgtgacctatcagacctaaacacaaac-aaacggtgaagttaccttcaaacaaactacctaacaccgtgcttcacagct 17042640  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaa 300  Q
    ||||||||||  ||| |||| |  ||||||| | |||||||| | |||||| || ||| | ||||||||||||||||||||||    
T  17042639 ttggtgtagtgtacacgagtttacaactcaacaaacagtccttagcatgtatca-agatgatacaagaaaggctcacaataaa 17042558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 18477006 - 18477217
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctc 120  Q
    |||||||||||||||||| ||||||||| ||||| || ||||||| |||||| ||||||| |||||||||||||||||||||||  || |||||||||      
T  18477006 agctctcagcaaactcctcgtttacacttaagacataagacctactcgtatagacttcaaactaggaactcctagatttgagatcccacctcactatcct 18477105  T
Q  121 atggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttg 220  Q
    ||||||||||||| ||   |||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||| ||   |  ||||    
T  18477106 atggtcagtcacagccattgtgacctatcagacctaaacacaaactcaatgatgaagttaccttcaaaca-aacaactagcacattgtttcgcaactttg 18477204  T
Q  221 gtgtagtacacaa 233  Q
    |||||||||||||    
T  18477205 gtgtagtacacaa 18477217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 321
Target Start/End: Original strand, 295534 - 295829
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | |||||| ||||||||||||||| ||||||  |||||||||||    
T  295534 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacttaggaactcctagatctgagatcccatctcactat 295633  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaagg 216  Q
    |  || |||||||||| |||  |||| |||||||| ||||| ||||||  |  |||||| ||||||||||||| ||||| ||  ||||| ||| ||||      
T  295634 cctatagtcagtcacagcccttgtgatctatcaga-ctaaaaacaaacaaacagatgaatttaccttcaaaca-aacaagtagtaccttacttcacaa-c 295730  T
Q  217 tttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgct 315  Q
    |||||||||||| ||| |       ||||||| |||||||||| |||||||| |||| |||  |||| ||||||||||||| ||||||||||||||| |     
T  295731 tttggtgtagtaaacatg-------aactcaacacacagtccttaacatgtatcacaaacgacacaacaaaggctcacaataaaaggttctaaacttaca 295823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 11656098 - 11656311
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    |||||||||||||||||| |||||||||  | |||||||||||| ||||||||  |||||||||||||||||||||||||||| |  ||||||||||||     
T  11656098 agctctcagcaaactcctcgtttacactttatgacctaggacctgcccgtatagccttcaacctaggaactcctagatttgagttcccatctcactatcc 11656197  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacacaaactc-aaggatgaagttaccttcaaacagaacaactaacaccttgctt-acaaggt 217  Q
     |||| |||||||| || | |||| ||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||| ||||||| || ||||  |    
T  11656198 tatggccagtcacagccactgtgacctatcagacctaaacacaaactcaaacaatgaagttaccttcaaaca-aacaactagcaccttgtttcacaa-ct 11656295  T
Q  218 ttggtgtagtacacaa 233  Q
    ||||||||||||||||    
T  11656296 ttggtgtagtacacaa 11656311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 23954641 - 23954499
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  23954641 atagctctcagcaaactcctcgtttacactatatgacctaggacctacctgtatatacttcaacctaggaactcctagatttgagatcccatctcactat 23954542  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||||||||||||  ||||||||| |||||||||||||||    
T  23954541 cctaatggtcagtcactgccccagtgacctatcagacctaaac 23954499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 314
Target Start/End: Original strand, 19633960 - 19634249
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| ||||||||||| |||||||      ||||||   ||||||||||    
T  19633960 tatagctctcagcaaactcctcgtttacactaaagatataggacctacccgtatagacttcaacctaagaactcc------tgagatcctatctcactat 19634053  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaa 214  Q
     || ||||||||||||| |||| ||||  ||||||||||||  ||| |||||| |  |||||||||||||||||  ||||||||||| |||| || ||||    
T  19634054 cctaatggtcagtcacagcccctgtgacttatcagacctaa--acagactcaaagtagaagttaccttcaaacacaaacaactaacatcttgtttcacaa 19634151  T
Q  215 ggtttggtgtagtacacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttg 313  Q
      ||  |||||||||||||||||||||| |||| | | |||||||||||    || |||||||| |||||||||||||||||  |||||||||| |||||    
T  19634152 -cttcagtgtagtacacaagagtatcaacctcacacaaacagtcctaaaagaatatcacagacgatacaagaaaggctcaca--aaaggttctagacttg 19634248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 13790754 - 13790896
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcacta- 116  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||     
T  13790754 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 13790853  T
Q  117 tctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
    ||| ||| ||||||||| |||| |||| |||||||||||||||    
T  13790854 tctaatgatcagtcacagcccctgtgacctatcagacctaaac 13790896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 20748246 - 20748067
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    |||||||| ||||||| | |||||||||  | |||||||||||||||  | || |||||||||||| ||||||||||| |||||| ||| |||||||||     
T  20748246 agctctcaacaaactcatcgtttacactttatgacctaggacctaccaatctagacttcaacctagaaactcctagatctgagatctcaactcactatcc 20748147  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaagga-tgaagttaccttcaaacagaacaacta 199  Q
     |||||||||||||||||| |||| ||||||||||||||||||||| |||  | |||||||||||||||||| ||||||||    
T  20748146 tatggtcagtcacaacccctgtgatctatcagacctaaacacaaacacaaaaattgaagttaccttcaaaca-aacaacta 20748067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 6580951 - 6580851
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||  |||||||||||    
T  6580951 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgagatcccatctcactat 6580852  T
Q  118 c 118  Q
    |    
T  6580851 c 6580851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 314
Target Start/End: Complemental strand, 13515624 - 13515386
Alignment:
Q  74 acttcaacctaggaactcctagatttgagatatcatctcactat-ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaagga 172  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||| || |||||||||||||||||| |||| ||||||||||||    || |||||| |     
T  13515624 actttaacctaggaactcctagatctgagatcccatctcactatcctaatggtcagtcacaacccctgtgacctatcagaccta---gcagactcaaagt 13515528  T
Q  173 tgaagttaccttcaaaca-gaacaactaacaccttgctt-acaaggtttggtgtagtacacaagagta-tcaa-actcaagacacagtcctaaacatgta 268  Q
     |||||||||||||||||  |||||||||||||||| || ||||  || ||||||||||||||||||| |||| |||| | ||||||||||||||| |||    
T  13515527 agaagttaccttcaaacacaaacaactaacaccttgtttcacaa-cttcggtgtagtacacaagagtattcaatactc-acacacagtcctaaacaagta 13515430  T
Q  269 ccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
     |||| ||  |||||||||||||||||  |||||||||| ||||||    
T  13515429 tcacaaacaatacaagaaaggctcaca--aaaggttctagacttgc 13515386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 17702481 - 17702623
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||| ||||||||||||||||||| ||||||  |||||||||||    
T  17702481 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttaaacctaggaactcctagatctgagatcccatctcactat 17702580  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || |||| |||| ||  ||| ||||| |||||||||||||||    
T  17702581 cctaatgggcagtaactgccctagtgacctatcagacctaaac 17702623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 9036782 - 9036878
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||  |||||||||    
T  9036782 atagctctcagcaaactcctcgtttgcactaaagacctaggacctacccgtattgacttcaacctaggaactcctagatctgagatcccatctcact 9036878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 13913866 - 13913961
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||| |  |||||||||||||||||||||||| |||||| ||||||||||    
T  13913866 tagctctcagcaaactcctcgtttacactaaagacctaggatctacccgttttaacttcaacctaggaactcctagatctgagatttcatctcact 13913961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 18483444 - 18483313
Alignment:
Q  30 caaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat-ctcatggtca 127  Q
    ||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||| ||| ||| ||||||  ||||||||||| || |||||||    
T  18483444 caaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaacacctggatctgagatcccatctcactatcctgatggtca 18483345  T
Q  128 gtcacaaccccagtgaactatcagacctaaac 159  Q
    ||||||||||| |||| |||||||||| ||||    
T  18483344 gtcacaacccctgtgacctatcagaccgaaac 18483313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 7496011 - 7495927
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| ||||||    
T  7496011 tagctctcagcaaactcctcgtttacactaaagacctaggacctacccatattgacttcaacctaggaactcctagatctgagat 7495927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 8224914 - 8225053
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | |||||| ||||||||||||||  |||||||||||||||||||     ||||||  |||||||||||    
T  8224914 atagctctcagcaaactcctcgtttacactatatgacctaagacctacccgtatagtcttcaacctaggaactcctc----tgagatcccatctcactat 8225009  T
Q  118 c-tcatggtcagtcacaaccccagtgaactatcagacctaaaca 160  Q
    | | |||||||||||||||| | |||| ||||||||||||||||    
T  8225010 cctaatggtcagtcacaaccactgtgacctatcagacctaaaca 8225053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 300
Target Start/End: Complemental strand, 21718998 - 21718735
Alignment:
Q  30 caaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctcatggtcagt 129  Q
    |||| |||| ||||||||| ||||||||||| |||||||| || |||| ||||||||||||||||||| |||||| |||||||||||||  |  ||||      
T  21718998 caaaatcctcgtttacacttaagacctaggatctacccgtctagactttaacctaggaactcctagatctgagatctcatctcactatcctacagtcaac 21718899  T
Q  130 cacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtagtac 229  Q
    || | |||  ||| | ||||||| ||||| ||| ||  || | |||||||||||||||||| ||||||||  ||||||||||||| ||||||||||| ||    
T  21718898 catagcccatgtg-attatcaga-ctaaaaacacac-aaatggtgaagttaccttcaaaca-aacaactatgaccttgcttacaa-gtttggtgtagcac 21718804  T
Q  230 acaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaa 300  Q
    | | |||| |  ||||||| | |||||||| |||||||| || ||| | ||||||||||||||||||||||    
T  21718803 a-acgagtttacaactcaataaacagtccttaacatgtatca-agatgatacaagaaaggctcacaataaa 21718735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 24195598 - 24195740
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||||||||||||  ||||||||| | ||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  24195598 atagctctcagcaaactcctcatttacactatatgacctaggagctacctgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 24195697  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || |||| |||| ||  ||| ||||| |||||||||||||||    
T  24195698 cctaatgggcagtaactgccctagtgacctatcagacctaaac 24195740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 13917918 - 13918013
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||| ||    |||||||||||||||||||||||| |||||| ||||||||||    
T  13917918 tagctctcagcaaattcctcgtttacactaaagacctaggacctacctgtcctgacttcaacctaggaactcctagatatgagatttcatctcact 13918013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 18547723 - 18547913
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||  |||||||||| |||||||||| | |||||| |||||||||||||| |||||||||||||||||| ||||| | ||||  ||||| |||||    
T  18547723 atagctcttggcaaactcctcgtttacactatatgacctaagacctacccgtatagacttcaacctaggaactcatagatctaagatcccatcttactat 18547822  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttg 207  Q
     || ||||||||||||||||||  ||| ||| |||||||||||   |||  ||| | |||||||||||| ||||  ||||||||||||||||    
T  18547823 cctaatggtcagtcacaacccctatgacctaacagacctaaaccagaacaaaagta-gaagttaccttccaacacaaacaactaacaccttg 18547913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 24 - 300
Target Start/End: Complemental strand, 286971 - 286703
Alignment:
Q  24 tctcagcaaactccttgtttacacta-aagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctcat 122  Q
    |||||| |||||||||||||| |  | |||||||||||||||||||| || | |||||||||||||||||||||| ||||||  ||||||||||||  |     
T  286971 tctcaggaaactccttgtttataacacaagacctaggacctacccgtctagatttcaacctaggaactcctagatctgagatcccatctcactatcctaa 286872  T
Q  123 ggtcagtcacaaccccagtgaactatcaga-cctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttgg 221  Q
       || |||||||||| ||| | |||||||  | |||||||     || |||||||||||||||||||| ||||||||  |||||||||| ||| |||||    
T  286871 caccaatcacaacccctgtg-attatcagattcaaaacaca-----aaagatgaagttaccttcaaaca-aacaactacaaccttgcttaaaagctttgg 286779  T
Q  222 tgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaa 300  Q
    ||||| ||| | || | |  ||||||| |||||||||| |||||||| || ||| | ||||||||||||||||||||||    
T  286778 tgtagcaca-atgact-tacaactcaacacacagtccttaacatgtatca-agaagatacaagaaaggctcacaataaa 286703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 15635957 - 15635815
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    ||||||||||| |||||||| |||||||||| | || |||||||||||||||||| ||||||| |||||||||||||||| ||||||  |||| ||||||    
T  15635957 atagctctcagtaaactcctcgtttacactatatgatctaggacctacccgtatagacttcaaactaggaactcctagatatgagatcccatcacactat 15635858  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||||||| ||||| | || || | |||||||||||||||    
T  15635857 cctaatggtcaatcacagctcctgtcacctatcagacctaaac 15635815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 8749114 - 8749210
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||| ||||| |||| |||||| ||||||||| |||||||||   |||||||||||||||||||||||| |||||| ||||||||||    
T  8749114 atagctctcagcaagctcctcgtttgcactaatgacctaggatctacccgtactaacttcaacctaggaactcctagatctgagatctcatctcact 8749210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 7479220 - 7479136
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||  |||||||| || ||| |||||||| ||||||    
T  7479220 tagctctcagcaaactcctcgtttacactaaagacctaggacctacccatattgacttcaacatatgaagtcctagatctgagat 7479136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 9031465 - 9031369
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| ||||   |||| |||||||||||||||||||   |||||||||||||||||||||||| ||||||  |||||||||    
T  9031465 atagctctcagcaaactcctcgtttgtgctaatgacctaggacctacccgtactgacttcaacctaggaactcctagatctgagatcccatctcact 9031369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 12054531 - 12054454
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagat 97  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||| || |  |||||||||||| |||||||||||    
T  12054531 tagctctcagcaaactcctcgtttacactaaagaccttggacctacctgtcttgacttcaacctagaaactcctagat 12054454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 1919320 - 1919185
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat- 117  Q
    |||||| ||||||||||| | ||||||||||      || ||||||||||||||   ||||||||||||||||||| || ||||||  |||||||||||     
T  1919320 atagctttcagcaaactcttcgtttacacta------tatgacctacccgtatagttttcaacctaggaactcctaaatatgagatcccatctcactatg 1919227  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
    || ||||||||||||  ||||||||| |||||| ||||||||    
T  1919226 ctaatggtcagtcactgccccagtgacctatcaaacctaaac 1919185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 21254078 - 21253977
Alignment:
Q  18 tatagctctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcacta 116  Q
    ||||| ||||| ||||||||| ||| ||| |||||||||||||||||||| || || |||||||||||||||||  ||||| |||||| |||||| ||||    
T  21254078 tatagttctcaacaaactcctcgttcacaactaaagacctaggacctacctgtctagacttcaacctaggaacttttagatctgagatctcatctaacta 21253979  T
Q  117 tc 118  Q
    ||    
T  21253978 tc 21253977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 215397 - 215333
Alignment:
Q  51 agacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||| ||||||||||||  ||||||||||||||||| |||||| |||||| ||||||||||    
T  215397 agacctagaacctacccgtattgacttcaacctaggaacttctagatatgagatctcatctcact 215333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 21094755 - 21094686
Alignment:
Q  50 aagacctaggacctacccgtatata-cttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||| ||||||  | ||||||||||    
T  21094755 aagacctaggacctacccgtctagaacttcaacctaggaactcctagatctgagatcccgtctcactatc 21094686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 15686211 - 15686143
Alignment:
Q  50 aagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||| |||||||| || || ||||||||| |||||||||||||| ||||||  ||||||||||||    
T  15686211 aagacctatgacctacctgtctagacttcaacccaggaactcctagatctgagatcccatctcactatc 15686143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 31649768 - 31649860
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||| ||||||| ||  ||||||||||||||||||| |  |||||||||||| || ||||| || ||||||  |||||||||    
T  31649768 tctcagcaaactcctcgtttacaactctagacctaggacctacccgtcttgacttcaacctagaaaatcctatatctgagatcccatctcact 31649860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 300
Target Start/End: Complemental strand, 6579530 - 6579353
Alignment:
Q  121 atggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttg 220  Q
    ||||||||||||| |||  || | |||||||||||||||||||||  || | |||||||||||||||||| |  | |||||| | |||||   || ||||    
T  6579530 atggtcagtcacagcccatgtaacctatcagacctaaacacaaac-aaacggtgaagttaccttcaaacaaactacctaacatcgtgcttcacagctttg 6579432  T
Q  221 gtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaa 300  Q
    |||||||  ||| |||| |  ||||||| | ||| |||| | |||||| || ||| | ||||||||||||||||||||||    
T  6579431 gtgtagtgtacacgagtttacaactcaacaaacaatccttagcatgtatca-agatgatacaagaaaggctcacaataaa 6579353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 13524766 - 13524707
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatactt 77  Q
    ||||| |||||||||||||||  |||||||||||||||||| ||||| ||||||| ||||    
T  13524766 tatagttctcagcaaactcctcatttacactaaagacctagtacctatccgtatagactt 13524707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 11558350 - 11558311
Alignment:
Q  76 ttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  11558350 ttcaacctaggaactcctagatttgagatcccatctcact 11558311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 11567619 - 11567580
Alignment:
Q  76 ttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  11567619 ttcaacctaggaactcctagatttgagatcccatctcact 11567580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 20 - 321
Target Start/End: Original strand, 26480 - 26782
Alignment:
Q  20 tagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||| ||  ||||||||||||     
T  26480 tagctctcaacaaactcctcatttacactaaagacctaggacctacccgtattgatttcaacctaggaactcctagatctgacatcccatctcactatcc 26579  T
Q  120 catggtcagtcacaaccccagtgaactatcagaccta-aac-acaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
     |  |||| ||||| |||| |||| |||||||||  | ||| |||||| ||| |||||||||||||||||||  || |||||  |||||||||| ||| |    
T  26580 tacagtcaatcacagcccctgtgatctatcagactaacaacaacaaacacaaagatgaagttaccttcaaac--aaaaactacaaccttgcttaaaagct 26677  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaat-aaaggttctaaacttgctt 316  Q
    |||| |||| |||||||||| || ||||| | ||||||||||||||||||| |||| ||| |||||||||||||| |||| |||||| |||||||||| |    
T  26678 ttggcgtagaacacaagagtttccaactctacacacagtcctaaacatgtatcacatacgatacaagaaaggctcgcaataaaaggtactaaacttgcat 26777  T
Q  317 caaca 321  Q
    |||||    
T  26778 caaca 26782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 21 - 233
Target Start/End: Original strand, 40411 - 40624
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    |||||||||||||||||| |||||||||  | ||||||||||||||| ||||| | |||||||||||||||||||||| ||||||  ||||||||||||     
T  40411 agctctcagcaaactcctcgtttacactttatgacctaggacctaccagtatagaattcaacctaggaactcctagatctgagatcccatctcactatcc 40510  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggttt 219  Q
     |||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||| | |  | |||||||| |||||    | |||    
T  40511 tatggtcagtcacaacccctgtgacctatcagacctaaacacaaactcaaagatgaagttaccttcaaaaaaactacctaacaccgtgcttcaccgcttt 40610  T
Q  220 ggtgtagtacacaa 233  Q
    ||||||||||||||    
T  40611 ggtgtagtacacaa 40624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 293
Target Start/End: Complemental strand, 17363 - 17087
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| |||||| ||||||||||||    
T  17363 tatagctctcagcaaattcctcgttaacactaaagacctaggacctacccgtatagacttcaacctagaaactcttagatctgagatctcatctcactat 17264  T
Q  118 c-tcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaa 214  Q
    | | ||||||||||||| |||  |||| |||||| ||||||  |   |||||| |  |||||||||||||||||  || ||||||||||||| || ||||    
T  17263 cttaatggtcagtcacagcccatgtgacctatcaaacctaa--attgactcaaagtagaagttaccttcaaacacaaataactaacaccttgtttcacaa 17166  T
Q  215 ggtttggtgtagtacacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctca 293  Q
      || |||||||||||||||||||||||||| | | | ||||||||||||| ||| |||||||  |||||||||| ||||    
T  17165 -cttcggtgtagtacacaagagtatcaaactaacacaaacagtcctaaacaagtatcacagacaatacaagaaagtctca 17087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 21 - 207
Target Start/End: Complemental strand, 36398877 - 36398690
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    |||||||||||||||||| |||||||||  | |||||||||||||||||| || |||||||||||||||||||||||| ||||||  ||||||||||||     
T  36398877 agctctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatcccatctcactatcc 36398778  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacac-aaactcaaggatgaagttaccttcaaacagaacaactaacaccttg 207  Q
     ||||||||||||| |||| |||| ||||||||||||||||| |||| ||| | |||||||||||||||||| |||||||| |||||||    
T  36398777 tatggtcagtcacagcccctgtgacctatcagacctaaacacaaaacacaaagttgaagttaccttcaaaca-aacaactagcaccttg 36398690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 26860381 - 26860208
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| | |||||||||||||||||||||| |||||| ||||||||||||    
T  26860381 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagatttcaacctaggaactcctagatctgagatctcatctcactat 26860282  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca 190  Q
     || ||||||||||||| || | |||| |||||| |||||||||||||||||| |  |||||||||||| ||||    
T  26860281 cctaatggtcagtcacagccactgtgacctatcatacctaaacacaaactcaaagtagaagttaccttccaaca 26860208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 300
Target Start/End: Complemental strand, 19466608 - 19466330
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||||||   ||||||||||    
T  19466608 tatagctctcagaaaactcctcatttacactaaagacctaggacctacccgtattaatttcaacctaggaactcctagatctgagatccaatctcactat 19466509  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggt 217  Q
    |  |  ||||  ||||||||| ||| | |||||||| ||||||||||  ||| |||||||||||||||||||| ||||||||  | |||||| | ||  |    
T  19466508 cctacagtcaaccacaacccctgtg-attatcagacttaaacacaaaaacaatgatgaagttaccttcaaaca-aacaactacaatcttgctcaaaaact 19466411  T
Q  218 ttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaa 300  Q
    | || |||| ||||||| || |  ||||||| ||||| |||| |||||||| || ||| | ||||||||||||||||||||||    
T  19466410 taggcgtagcacacaagtgt-tacaactcaacacacaatccttaacatgtatcaaaga-gatacaagaaaggctcacaataaa 19466330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 23758700 - 23758842
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||| ||||| ||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  23758700 atagttctcaacaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 23758799  T
Q  118 c-tcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
    | | ||||||||||||  ||||||||| |||||||||||||||    
T  23758800 cgtaatggtcagtcactgccccagtgacctatcagacctaaac 23758842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 22610967 - 22611156
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  22610967 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 22611066  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttg 207  Q
     || |||||| |||||  ||| ||||| |||||| |||||||| |||| | || |  |||||||||||| ||||  |||||||| |||||||    
T  22611067 cctaatggtc-gtcactgccctagtgacctatcaaacctaaac-caaaataaaagtagaagttaccttccaacacaaacaactagcaccttg 22611156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 24790239 - 24790101
Alignment:
Q  23 ctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat-ctc 120  Q
    |||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||| ||||||| ||     
T  24790239 ctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatatcactatccta 24790140  T
Q  121 atggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
    ||||||||||||  ||| ||||| | |||||||||||||    
T  24790139 atggtcagtcactgcccaagtgacccatcagacctaaac 24790101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 12910564 - 12910706
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||| ||||||||||| | |||||||||| | | ||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  12910564 atagctttcagcaaactcgtcgtttacactatatggcctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 12910663  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || ||| |||||||||| ||  |||| |||||||||||||||    
T  12910664 cctaatgatcagtcacaatccatgtgacctatcagacctaaac 12910706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 29566086 - 29566182
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||   |||||||||||| ||||||||||| ||||||  |||||||||    
T  29566086 atagctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgacttcaacctagaaactcctagatctgagatcccatctcact 29566182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 300
Target Start/End: Original strand, 21530459 - 21530736
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||| |||| |||||| |||||||||||||||||| || |||  | |||||| |||||||||||| || ||||||  |||||||||||    
T  21530459 tatagctctcagcaaattcctcgtttacgctaaagacctaggaccta-ccatattgatttcaacttaggaactcctaaatctgagatcccatctcactat 21530557  T
Q  118 ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactc-aaggatgaagttaccttcaaacagaacaactaacaccttgcttacaagg 216  Q
    |  |   ||| |||||||||| ||| | |||||||| | |  |  ||||| || | |||||||||||||||||| | ||||||  | |||||||| |||     
T  21530558 cctacaatcaatcacaacccctgtg-attatcagacttta--aataactcaaatggtgaagttaccttcaaaca-accaactacaatcttgcttaaaagc 21530653  T
Q  217 tttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaa 300  Q
    ||||| |||| |||||||||| |  ||||||| ||||| |||| |||||||| || |   | ||||||||||||||||||||||    
T  21530654 tttggcgtagcacacaagagtttacaactcaacacacattccttaacatgtatca-aactgatacaagaaaggctcacaataaa 21530736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 27107589 - 27107681
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||  ||||||| || |||||||||||||||||||||   ||||||||||||||||||||||||||||||| || |||||||    
T  27107589 tctcagcaaactccaagtttacaacttaagacctaggacctacccgtactgacttcaacctaggaactcctagatttgagatctcgtctcact 27107681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 50 - 296
Target Start/End: Complemental strand, 21250251 - 21250016
Alignment:
Q  50 aagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctcatggtcagtcacaaccccagtgaactatc 149  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||| |||||| |||||||||||||  |   ||| ||||| |||| ||| | ||||    
T  21250251 aagacctaggacctacccgtctagacttcaacctaggatctcctagatctgagatctcatctcactatcctacaatcaatcacagcccctgtg-attatc 21250153  T
Q  150 agacctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtagtacacaagagtatcaaactcaag 249  Q
    | |  |||||||||    ||  ||||||||||||||||||| |  |||||  |||||||||  ||| |||||||||||||||  |||| |  |||||||     
T  21250152 atatttaaacacaa----aataatgaagttaccttcaaacata--aactacaaccttgcttcaaagctttggtgtagtacac--gagt-tacaactcaat 21250062  T
Q  250 acacagtcctaaacatgtaccacagacggtacaagaaaggctcacaa 296  Q
    | |||||||| ||||||||||| ||  | ||||||||||||||||||    
T  21250061 aaacagtccttaacatgtacca-aggtgatacaagaaaggctcacaa 21250016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 13315048 - 13314954
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||||||||| |||| |||||| |||||||||||||||||||   ||||||| | |||||||||||||| ||||||  |||||||||    
T  13315048 agctctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactgacttcaatcaaggaactcctagatctgagatcccatctcact 13314954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 171 - 322
Target Start/End: Original strand, 19444828 - 19444979
Alignment:
Q  171 gatgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtacc 270  Q
    |||||||||||||||||||| ||||||||  |||||||||||||| || ||||||| | |||||||| |  ||||||| | |||||||| | |||||| |    
T  19444828 gatgaagttaccttcaaaca-aacaactacgaccttgcttacaagcttcggtgtagcatacaagagtttacaactcaacaaacagtccttagcatgtatc 19444926  T
Q  271 acagacggtacaagaaaggctcacaataaa--ggttctaaacttgcttcaacac 322  Q
    | ||| | ||||||||||||||||||||||   || |||||||||| |||||||    
T  19444927 a-agatgatacaagaaaggctcacaataaaacagtactaaacttgcatcaacac 19444979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 27111158 - 27111250
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||||| |  ||||||| || |||| ||||||||||||||||  ||||||||||||||||||||||||| |||||| ||||||||||    
T  27111158 tctcagcaaacttcaagtttacaacttaagaactaggacctacccgtacttacttcaacctaggaactcctagatctgagatctcatctcact 27111250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 24317269 - 24317188
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    ||||| ||||||||| ||||||| ||  |||||||||||||||||||||  ||||||| |||||||||||||||| ||||||    
T  24317269 tctcaacaaactcctcgtttacaactctagacctaggacctacccgtattgacttcaaactaggaactcctagatctgagat 24317188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 20475356 - 20475264
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||  ||||||| || |  |||||||||||||||||||  |||||||||||||| ||||||||| ||||||  |||||||||    
T  20475356 tctcagcaaactccaagtttacaacttatcacctaggacctacccgtattgacttcaacctaggagctcctagatctgagatcccatctcact 20475264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 20649607 - 20649547
Alignment:
Q  53 acctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctca 113  Q
    ||||||||||||||||||    |||||||||||||||||||||||||||||| ||||||||    
T  20649607 acctaggacctacccgtactggcttcaacctaggaactcctagatttgagatctcatctca 20649547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 18765750 - 18765845
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctca 113  Q
    ||||||||||| |||||||| |||| ||||| | |||||||||| ||||||||   |||||||||||||||||| ||||| ||||||  |||||||    
T  18765750 atagctctcagtaaactcctcgtttgcactatatgacctaggacttacccgtactaacttcaacctaggaactcgtagatctgagatcccatctca 18765845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 20476657 - 20476565
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||  ||||||| || |  |||||||||||||||||||  |||||||||||| ||||| ||||| ||||||  |||||||||    
T  20476657 tctcagcaaactccaagtttacaacttatcacctaggacctacccgtattgacttcaacctagaaactcttagatctgagatcccatctcact 20476565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 24317890 - 24317798
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||| ||||| | ||  ||||||||||||||||| |||  ||||||||||||||| |||||||| || |||  |||||||||    
T  24317890 tctcagcaaactcctggtttataactctagacctaggacctacccatattgacttcaacctaggaagtcctagatctgtgatcgcatctcact 24317798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 31587554 - 31587646
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||  ||||||| ||  |||||||||||||||  ||||  |||||||||||||||||||||||| | |||| ||||| ||||    
T  31587554 tctcagcaaactccaagtttacaactctagacctaggacctacatgtattgacttcaacctaggaactcctagatcttagatctcatcccact 31587646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 28 - 311
Target Start/End: Complemental strand, 16700 - 16414
Alignment:
Q  28 agcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc-tcatggt 125  Q
    |||||||||||  ||||||||  | ||||||||||||||||||||| ||||||||||||||||||||| || | ||||  |||||||||||| | |||||    
T  16700 agcaaactcctcatttacactttatgacctaggacctacccgtatagacttcaacctaggaactcctatatctaagatcccatctcactatcttaatggt 16601  T
Q  126 cagtcaca-accccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttgctt-acaaggtttggt 222  Q
    || |||||  ||||  ||| ||||||||||| ||||||||| ||| ||||||||||||||||||||  |||||||||||||||| || || |  || |||    
T  16600 caatcacagccccctatgacctatcagacctgaacacaaacacaaagatgaagttaccttcaaacataaacaactaacaccttgtttcacta-cttcggt 16502  T
Q  223 gtagtacacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaact 311  Q
    ||||||||||||||||||||||| | | | ||| ||||||||| ||| |||| ||| ||||||||||| |||||  ||||||||||||||    
T  16501 gtagtacacaagagtatcaaacttacacaaacattcctaaacaagtatcacaaacgatacaagaaaggatcaca--aaaggttctaaact 16414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 207
Target Start/End: Complemental strand, 16296 - 16111
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatct 119  Q
    |||||||| |||||||||  ||||||||  | |||||||||||||||||| || |||||||||||||||||||||||| |||||| |||||||||| ||     
T  16296 agctctcaacaaactcctcatttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctgagatctcatctcactgtcc 16197  T
Q  120 catggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggat-gaagttaccttcaaacagaacaactaacaccttg 207  Q
     ||||||||||||| |||| |||| ||||||||||||||||  ||| |||  || ||||||||||||||||| |||||||| |||||||    
T  16196 tatggtcagtcacagcccctgtgagctatcagacctaaaca--aacacaaaaattgaagttaccttcaaaca-aacaactagcaccttg 16111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 37080 - 37222
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||| | | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  37080 atagctctcagcaaactcctcgtttacaccatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 37179  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || |||||||||||   || |||||| |||||||||||||||    
T  37180 cctaatggtcagtcattgcctcagtgacctatcagacctaaac 37222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 61558 - 61424
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||| |||||||||||| | |||||| |||||||||||||| |||||||||||||||||||||||| ||||||  |||||||||||    
T  61558 atagctctcagcaaactcattgtttacactatatgacctaagacctacccgtatagacttcaacctaggaactcctagatctgagatcccatctcactat 61459  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcag 151  Q
     || ||||||||||||  ||||||||| |||||||    
T  61458 cctaatggtcagtcactgccccagtgacctatcag 61424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 48373 - 48287
Alignment:
Q  74 acttcaacctaggaactcctagatttgagatatcatctcactat-ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
    |||||||||||||||||||||||| | |||| |||||||||||| || ||||||||||||  ||||||||  |||||| ||||||||    
T  48373 acttcaacctaggaactcctagatctaagatctcatctcactatcctaatggtcagtcactgccccagtgtcctatcaaacctaaac 48287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 110341 - 110199
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||    
T  110341 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatttgagatcccatctcactat 110242  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || |||  |||||||  ||| | ||| |||||||||||||||    
T  110241 cctaatgaacagtcactgccctaatgacctatcagacctaaac 110199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 87810 - 88000
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||||||||||||| |||||||||| | |||||||||||||||||| || ||||||||| |||||||||||||| ||||||  |||||||||||    
T  87810 atagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtctagacttcaacccaggaactcctagatctgagatcccatctcactat 87909  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaacacaaactcaaggatgaagttaccttcaaaca-gaacaactaacaccttg 207  Q
     ||   ||||||||| | |||| |||| ||||||||||||||| |||| | || |  |||||||||||| ||||  ||||||||||| ||||    
T  87910 cctacgggtcagtcatagcccctgtgacctatcagacctaaac-caaaataaaagtagaagttaccttccaacacaaacaactaacatcttg 88000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 8465 - 8371
Alignment:
Q  220 ggtgtagtacacaagagtatcaaactcaagacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgc 314  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||    
T  8465 ggtgtagtacacatgagtatcaaactcaacatacagtcctaaacatgtatcacagacgatacgagaaaggctctcaataaaggttctaaacttgc 8371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 19 - 159
Target Start/End: Complemental strand, 25758 - 25616
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||| ||||||||| |||||||||| | ||||||||||||||||||||| ||||||||||| |||||||||||| ||||||  |||||||||||    
T  25758 atagctctcaacaaactcctcgtttacactagatgacctaggacctacccgtatagacttcaacctacgaactcctagatctgagatcccatctcactat 25659  T
Q  118 -ctcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
     || |||||||| |||  ||| ||||| ||||  |||||||||    
T  25658 cctaatggtcagccactgccctagtgacctatatgacctaaac 25616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 36667 - 36808
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat 117  Q
    |||||||||| ||||||||| |||||||||| | ||||||||||||||| ||||||||||||| ||||||||||| |||| ||||||  ||| |||||||    
T  36667 atagctctcaacaaactcctcgtttacactatatgacctaggacctacctgtatatacttcaaactaggaactcccagatctgagatcccatttcactat 36766  T
Q  118 c-tcatggtcagtcacaaccccagtgaactatcagacctaaac 159  Q
    | | |||||||||||| | ||  |||| |||||||||||||||    
T  36767 cttaatggtcagtcac-atccttgtgacctatcagacctaaac 36808  T

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Target: scaffold0064 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 53011 - 52915
Alignment:
Q  18 tatagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |    |||||||||||||||||||||| ||||||  |||||||||    
T  53011 tatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgt-ttggtttcaacctaggaactcctagatctgagatcccatctcact 52915  T

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Target: scaffold0064; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 45937 - 45865
Alignment:
Q  32 aactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    ||||| |||||| |||||||||||||||||||||||||||  ||||||||||| |||||||| ||| ||||||    
T  45937 aactctttgtttccactaaagacctaggacctacccgtattgacttcaacctaagaactccttgatctgagat 45865  T

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Target: scaffold0032 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 103180 - 103265
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||||||||||   |||||||||||||||||||||||| ||||||    
T  103180 atagctctgagcaaactccttgtttgcaccaaagacctaggacctacccgtactgacttcaacctaggaactcctagatctgagat 103265  T

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Target: scaffold0020 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 207
Target Start/End: Complemental strand, 12553 - 12405
Alignment:
Q  60 acctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactat-ctcatggtcagtcacaaccccagtgaactatcagacctaaa 158  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||  ||||||||||| || |||||||||||||||||  ||||  |||||||||||||    
T  12553 acctacccgtatagacttcaacctagaaactcctagatctgagatcccatctcactatcctaatggtcagtcacaacccatgtgacttatcagacctaaa 12454  T
Q  159 cacaaactcaaggatgaagttaccttcaaacag-aacaactaacaccttg 207  Q
    |  ||||  ||  | |||||||||||| ||||| ||||||||||||||||    
T  12453 ccaaaacaaaaata-gaagttaccttctaacagaaacaactaacaccttg 12405  T

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Target: scaffold0185 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 2443 - 2357
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagat 104  Q
    |||||||||||||||||||  |||||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||    
T  2443 atagctctcagcaaactccccgtttacactatatgacctaggacctagccgtatagacttcaacctaggaactcctagatctgagat 2357  T

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Target: scaffold0143 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 36374 - 36456
Alignment:
Q  21 agctctcagcaaactccttgtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgaga 103  Q
    ||||||||||||||| || |||| |||||| ||||||||||||||| |||   |||||||||||||||||||||||| |||||    
T  36374 agctctcagcaaacttctcgtttgcactaatgacctaggacctaccggtactgacttcaacctaggaactcctagatctgaga 36456  T

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Target: scaffold0069 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 224 - 321
Target Start/End: Original strand, 6186 - 6284
Alignment:
Q  224 tagtacacaagagtatcaaactca-agacacagtcctaaacatgtaccacagacggtacaagaaaggctcacaataaaggttctaaacttgcttcaaca 321  Q
    |||| ||||||||||||||||||| | ||||||||||||||| ||| ||||| || |||||| ||||| |||| ||||| |||||||||||| ||||||    
T  6186 tagtgcacaagagtatcaaactcacacacacagtcctaaacaagtatcacaggcgatacaagtaaggcacacagtaaagattctaaacttgcatcaaca 6284  T

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Target: scaffold0505 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 10116 - 10024
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||| ||||||||||||||||| ||  |||||||||||||| |||| |  ||||||||| |||||||||||||| |||||| ||||||||||    
T  10116 tctcaccaaactccttgtttacaactctagacctaggacctatccgtcttgacttcaaccgaggaactcctagatctgagatctcatctcact 10024  T

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Target: scaffold0035 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 37445 - 37541
Alignment:
Q  24 tctcagcaaactccttgtttaca-ctaaagacctaggacctacccgtatatactt-caacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||||  |||||| || |||||||||||||||||||| || |||| |||||||||||||||||||| ||||||  ||||||| ||||    
T  37445 tctcagcaaactcctcatttacaacttaagacctaggacctacccgtctagactttcaacctaggaactcctagatatgagatcccatctcattatc 37541  T

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Target: scaffold0022 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 3216 - 3291
Alignment:
Q  40 gtttacactaaagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||| |||||| |||||||||||||||||||   | |||||||||||||||||||||||||||||  |||||||||    
T  3216 gtttgcactaatgacctaggacctacccgtactgatttcaacctaggaactcctagatttgagatcccatctcact 3291  T

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Target: scaffold0328 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 17057 - 16960
Alignment:
Q  19 atagctctcagcaaactccttgtttacactaaa-gacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    |||||||||| ||||||||| |||| ||||| | ||||||| ||| |||||||   |||||||||||||||||||||||| ||||||  |||||||||    
T  17057 atagctctcaacaaactcctcgtttgcactatatgacctagtacccacccgtactgacttcaacctaggaactcctagatctgagatcccatctcact 16960  T

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Target: scaffold0480 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 233
Target Start/End: Original strand, 11295 - 11476
Alignment:
Q  51 agacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatctcatggtcagtcacaaccccagtgaactatca 150  Q
    |||||||||||||||| ||||  ||||||||||||| |||||||||| ||||||  ||||||||| || ||   ||| ||||| |||| ||| | |||||    
T  11295 agacctaggacctaccggtattgacttcaacctaggtactcctagatctgagatcccatctcact-tcccacaatcaatcacagcccctgtg-attatca 11392  T
Q  151 ga-cctaaacacaaactcaaggatgaagttaccttcaaacagaacaactaacaccttgcttacaaggtttggtgtagtacacaa 233  Q
    ||    |||| |||||  ||||||||||||||||||||||| |  | |||||| |||||||   || |||||||||||||||||    
T  11393 gattacaaactcaaacaaaaggatgaagttaccttcaaacaaactacctaacatcttgcttcacagctttggtgtagtacacaa 11476  T

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Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 202500 - 202568
Alignment:
Q  50 aagacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcactatc 118  Q
    |||||||||||||||||| | |  ||||||||||||||||| |||||| ||||||  ||||||||||||    
T  202500 aagacctaggacctacccatctggacttcaacctaggaacttctagatctgagatcccatctcactatc 202568  T

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Target: scaffold0520 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 5525 - 5589
Alignment:
Q  51 agacctaggacctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||| |||| || |  |||||||||||||||||||||||| ||||||  |||||||||    
T  5525 agacctaggacttacctgtcttaacttcaacctaggaactcctagatctgagatcccatctcact 5589  T

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Target: scaffold0423 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 13725 - 13778
Alignment:
Q  62 ctacccgtatatacttcaacctaggaactcctagatttgagatatcatctcact 115  Q
    ||||||||||  |||||||||||||||||| ||||  |||||| ||||||||||    
T  13725 ctacccgtattgacttcaacctaggaactcatagacctgagatctcatctcact 13778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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