View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7800_low_28 (Length: 257)

Name: NF7800_low_28
Description: NF7800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7800_low_28
NF7800_low_28
[»] chr8 (10 HSPs)
chr8 (23-257)||(33977500-33977730)
chr8 (23-257)||(33962181-33962404)
chr8 (23-257)||(26536729-26536957)
chr8 (29-246)||(27924947-27925157)
chr8 (23-220)||(23540895-23541089)
chr8 (23-246)||(45136565-45136782)
chr8 (23-188)||(22485640-22485804)
chr8 (153-220)||(13659988-13660055)
chr8 (153-220)||(13718631-13718698)
chr8 (101-220)||(22476656-22476776)
[»] chr5 (17 HSPs)
chr5 (23-257)||(26037222-26037449)
chr5 (23-246)||(22082179-22082395)
chr5 (23-257)||(30605179-30605408)
chr5 (23-220)||(38405838-38406032)
chr5 (23-192)||(23420045-23420212)
chr5 (23-257)||(26328703-26328931)
chr5 (101-257)||(23624318-23624471)
chr5 (29-220)||(23757751-23757939)
chr5 (29-220)||(23823207-23823395)
chr5 (23-220)||(9422004-9422198)
chr5 (101-246)||(24190315-24190459)
chr5 (23-221)||(18221585-18221780)
chr5 (52-246)||(22404278-22404468)
chr5 (29-246)||(22251535-22251747)
chr5 (31-189)||(22245855-22246012)
chr5 (101-177)||(25105023-25105101)
chr5 (101-177)||(25164116-25164194)
[»] chr7 (16 HSPs)
chr7 (23-246)||(29545629-29545847)
chr7 (33-246)||(20991996-20992204)
chr7 (29-246)||(12326265-12326477)
chr7 (23-220)||(4459216-4459410)
chr7 (23-221)||(16437251-16437446)
chr7 (23-246)||(16207369-16207586)
chr7 (52-220)||(11999358-11999523)
chr7 (101-246)||(11588917-11589061)
chr7 (101-189)||(14927156-14927244)
chr7 (101-189)||(15350622-15350710)
chr7 (23-150)||(10280400-10280525)
chr7 (27-246)||(11520904-11521119)
chr7 (104-246)||(14165619-14165758)
chr7 (101-189)||(645641-645732)
chr7 (23-94)||(15506830-15506901)
chr7 (31-162)||(15438611-15438739)
[»] chr1 (9 HSPs)
chr1 (26-220)||(11667394-11667586)
chr1 (23-246)||(24986436-24986654)
chr1 (23-192)||(20840752-20840919)
chr1 (27-220)||(4246513-4246703)
chr1 (23-220)||(20200576-20200769)
chr1 (101-246)||(26971959-26972106)
chr1 (23-188)||(13165901-13166065)
chr1 (23-135)||(23477423-23477532)
chr1 (111-189)||(17850949-17851027)
[»] scaffold0226 (3 HSPs)
scaffold0226 (23-246)||(7026-7244)
scaffold0226 (31-242)||(17621-17827)
scaffold0226 (31-242)||(27015-27221)
[»] chr3 (14 HSPs)
chr3 (23-220)||(18063695-18063890)
chr3 (30-220)||(295918-296105)
chr3 (29-220)||(18548125-18548313)
chr3 (41-246)||(44452936-44453135)
chr3 (23-249)||(28051589-28051813)
chr3 (23-246)||(19634334-19634551)
chr3 (23-184)||(13515107-13515266)
chr3 (23-246)||(13791130-13791348)
chr3 (23-188)||(21253485-21253647)
chr3 (23-246)||(18482861-18483079)
chr3 (23-246)||(24195977-24196196)
chr3 (23-189)||(23954046-23954212)
chr3 (101-189)||(7028634-7028725)
chr3 (23-246)||(17135633-17135851)
[»] chr6 (27 HSPs)
chr6 (23-240)||(20465382-20465594)
chr6 (23-246)||(12039196-12039414)
chr6 (23-199)||(20653566-20653740)
chr6 (23-220)||(25805884-25806079)
chr6 (23-246)||(19077597-19077814)
chr6 (23-221)||(29253170-29253365)
chr6 (29-246)||(8465161-8465377)
chr6 (23-221)||(19100373-19100568)
chr6 (23-220)||(13195801-13195995)
chr6 (24-143)||(17863963-17864079)
chr6 (23-192)||(20989278-20989445)
chr6 (26-177)||(17876245-17876394)
chr6 (26-220)||(13869893-13870084)
chr6 (23-220)||(12028631-12028825)
chr6 (23-246)||(33666245-33666462)
chr6 (23-189)||(17235101-17235265)
chr6 (23-189)||(23882186-23882349)
chr6 (23-247)||(23879337-23879556)
chr6 (23-189)||(21706018-21706182)
chr6 (101-175)||(28623142-28623217)
chr6 (23-220)||(19171893-19172086)
chr6 (26-246)||(19894161-19894375)
chr6 (23-189)||(9281198-9281363)
chr6 (101-188)||(15930411-15930498)
chr6 (23-189)||(17855701-17855866)
chr6 (143-246)||(25969794-25969893)
chr6 (143-246)||(25974234-25974333)
[»] chr4 (11 HSPs)
chr4 (31-257)||(15699832-15700052)
chr4 (23-246)||(15161972-15162190)
chr4 (23-246)||(10724715-10724925)
chr4 (23-246)||(10938484-10938694)
chr4 (101-189)||(18601223-18601313)
chr4 (101-246)||(25117308-25117452)
chr4 (23-188)||(16384397-16384561)
chr4 (109-189)||(19183255-19183335)
chr4 (23-189)||(33898497-33898662)
chr4 (23-189)||(23399684-23399850)
chr4 (101-246)||(28019755-28019899)
[»] scaffold0213 (1 HSPs)
scaffold0213 (23-246)||(8067-8286)
[»] scaffold0259 (1 HSPs)
scaffold0259 (30-210)||(16821-16998)
[»] scaffold0003 (1 HSPs)
scaffold0003 (23-221)||(26881-27076)
[»] scaffold0190 (1 HSPs)
scaffold0190 (23-192)||(16109-16276)
[»] scaffold0069 (2 HSPs)
scaffold0069 (102-221)||(6383-6502)
scaffold0069 (23-79)||(9289-9345)
[»] chr2 (4 HSPs)
chr2 (23-246)||(24789647-24789866)
chr2 (104-221)||(15328801-15328918)
chr2 (23-189)||(12910998-12911163)
chr2 (101-189)||(22611396-22611487)
[»] scaffold0185 (1 HSPs)
scaffold0185 (23-246)||(1856-2074)
[»] scaffold0103 (1 HSPs)
scaffold0103 (23-246)||(25166-25384)
[»] scaffold0359 (1 HSPs)
scaffold0359 (23-123)||(2464-2561)
[»] scaffold0088 (1 HSPs)
scaffold0088 (57-189)||(37097-37227)
[»] scaffold0037 (1 HSPs)
scaffold0037 (23-246)||(109747-109966)
[»] scaffold0004 (1 HSPs)
scaffold0004 (101-220)||(356858-356979)


Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 23 - 257
Target Start/End: Complemental strand, 33977730 - 33977500
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  33977730 atcagttgtggaatattcctaaagtagtatttattttttaggaaaaatttgttattgatttggacgatcctagagat---gttccgacattttaggactt 33977634  T
Q  123 tacatatttgtctctaattctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataat 222  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33977633 tacatatttgtctctgattctgttttgcagattagctgaaccgatctgctttgttctgaagcccaactaaagtatttgacccgagctgctt-agtataat 33977535  T
Q  223 ataagtgagacttcaagacctaatgaactattcaa 257  Q
    |||||||||||||||||||||||| ||||||||||    
T  33977534 ataagtgagacttcaagacctaatcaactattcaa 33977500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 23 - 257
Target Start/End: Complemental strand, 33962404 - 33962181
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||           ||||||||||||||||    
T  33962404 atcagtcgtggaatattcctaaagtagtatttattttttaggaaaaatttgttattgatttggacgatcctag-----------cgacattttaggactt 33962316  T
Q  123 tacatatttgtctctaattctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataat 222  Q
    ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33962315 tacatatttgtctctgattctgttttgcagattagctgaaccgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataat 33962216  T
Q  223 ataagtgagacttcaagacctaatgaactattcaa 257  Q
    |||||||||||||||||||||||||||||||||||    
T  33962215 ataagtgagacttcaagacctaatgaactattcaa 33962181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 257
Target Start/End: Complemental strand, 26536957 - 26536729
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||| ||||||||||| |||||||||| ||| ||   |||||||||||||||||||| |    
T  26536957 atcagttgtgaaatattcctaaagtagtatttatattttatgaaatatttgttattgttttggacgatactaaag---atgttccgacattttaggac-t 26536862  T
Q  123 tacatatttgtctctaattctgttttgcaaattagctgaatcgatctgctttgttctgaagccc-aactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||||  | ||||| ||||||| |||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||    |    
T  26536861 tccatatttgtcgttgattctattttgcagattagctgaaccgatatgctttgttctaaagcccaaactaaagtatttgacccgagctacttcag---ca 26536765  T
Q  222 tataagtgagacttcaagacctaatgaactattcaa 257  Q
    ||||||||||||||||||||||||||||||||||||    
T  26536764 tataagtgagacttcaagacctaatgaactattcaa 26536729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 29 - 246
Target Start/End: Original strand, 27924947 - 27925157
Alignment:
Q  29 tgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacata 128  Q
    ||||||||||| |||||||||  ||||| ||||| |||| ||||||||||| || | ||||||||| ||   ||||||||||||||||||||||| ||||    
T  27924947 tgtggaatatttctaaagtagattttatattttatgaaatatttgttattggttggaacgatcctaaag---atgttccgacattttaggactttccata 27925043  T
Q  129 tttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatataag 227  Q
    ||||| ||| |||| ||||||||| |||||||||| |||||||||||||  ||||| |||||| ||||||||  ||| ||||||||||||   |||||||    
T  27925044 tttgtttctgattcttgttttgcagattagctgaaccgatctgctttgtgttgaag-ccaact-aagtatttagcccaagctgcttcagt---atataag 27925138  T
Q  228 tgagacttcaagacctaat 246  Q
     ||||||||||||||||||    
T  27925139 ggagacttcaagacctaat 27925157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 23540895 - 23541089
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| |||||||||  ||||| |||||||||| ||||||||||| || | ||||||||| |    |||||| |||||||| ||||||    
T  23540895 atcagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctata---aatgttctgacatttttggactt 23540991  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    | ||||||||| ||| |||| ||||||||| ||||| |||| ||||||||||||| ||||| ||||||| ||||||||  ||| |||||||||| ||||    
T  23540992 tccatatttgtttctgattcttgttttgcagattagttgaaccgatctgctttgtgctgaaacccaact-aagtatttagcccaagctgcttcaatata 23541089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 45136782 - 45136565
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| ||||||||   ||||| |||||||||| ||||||||||| || | ||||||||| |    ||||||||||||||||||||||    
T  45136782 atcagctgtggaatatttctaaagtatattttatattttaggaaatatttgttattggttggaacgatcctata---aatgttccgacattttaggactt 45136686  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||| | | |||| ||||||||| ||||||||||  ||| |||||||| ||||||||||||| ||||||||  | | |||||||| |||   |    
T  45136685 tccatatttgtttatgattcttgttttgcagattagctgaactgatttgctttgtgctgaagcccaact-aagtatttatctcaagctgcttgagt---a 45136590  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    ||||||  |||||||||||||||||    
T  45136589 tataaggaagacttcaagacctaat 45136565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 22485804 - 22485640
Alignment:
Q  23 atcagttgtggaatattcctaaagtagta-tttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| ||||||||||| ||||||| ||| ||||| |||||||||| ||||  ||||| || | ||||||||| |    |||||||||||||||||||||    
T  22485804 atcagctgtggaatatttctaaagt-gtattttatattttaggaaatatttaatattgtttagaacgatcctata---aatgttccgacattttaggact 22485709  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaa 188  Q
    || || |||||| ||| |||| ||||||||| ||| |||||||||||||||| || | |||||||||||    
T  22485708 ttccagatttgtttctgattcttgttttgcagattaagctgaatcgatctgcattttactgaagcccaa 22485640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 13659988 - 13660055
Alignment:
Q  153 attagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    |||||||||| ||||||||||||| ||||||||||| ||| ||||||  ||| |||||||||||||||    
T  13659988 attagctgaaccgatctgctttgtgctgaagcccaattaatgtatttagcccaagctgcttcagtata 13660055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 220
Target Start/End: Original strand, 13718631 - 13718698
Alignment:
Q  153 attagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    |||||||||| ||||||||||||| ||||||||||| ||| ||||||  ||| |||||||||||||||    
T  13718631 attagctgaaccgatctgctttgtgctgaagcccaattaatgtatttagcccaagctgcttcagtata 13718698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 22476776 - 22476656
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaactaaagtatt 198  Q
    ||||||||||||||||||||||| || |||||| ||| |||| ||||||||| ||| ||||||| |||||||| ||   ||||||||||| | || ||||    
T  22476776 atgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcatttaactgaagcccaa-tgaaatatt 22476678  T
Q  199 tgacccgagctgcttcagtata 220  Q
    |  ||| |||||||||||||||    
T  22476677 tagcccaagctgcttcagtata 22476656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 23 - 257
Target Start/End: Complemental strand, 26037449 - 26037222
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||   ||||||||||||||||||||    
T  26037449 atcagttgtggaatattcctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaagat---gttccgacattttaggactt 26037353  T
Q  123 tacatatttgtctctaattctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataat 222  Q
    | ||||||||| ||| ||||||||||||| ||||||||||  ||||| ||||||||||||||| |||||||||||||||||||||||||||||||   ||    
T  26037352 tccatatttgt-tctgattctgttttgcagattagctgaactgatcttctttgttctgaagccaaactaaagtatttgacccgagctgcttcagt---at 26037257  T
Q  223 ataagtgagacttcaagacctaatgaactattcaa 257  Q
    ||||| |||||||||||||||||||||||||||||    
T  26037256 ataagggagacttcaagacctaatgaactattcaa 26037222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 22082179 - 22082395
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||| ||   |||||| ||||||||| |||||    
T  22082179 atcagttgtggaatattcctaaagtagtgtttatattttaggaaatatttgttattgttttggacgatcctaaag---atgttctgacattttaagactt 22082275  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||||||| |||| ||||||||| || ||||| | ||||||| ||||||||| || ||||| ||||||||||||||||||||||| |||   |    
T  22082276 tccatatttgtctctgattcttgttttgcatatcagctgga-cgatctgttttgttctggagtccaac-aaagtatttgacccgagctgctttagt---a 22082370  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    |||||| |||||||||| |||||||    
T  22082371 tataagggagacttcaaaacctaat 22082395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 257
Target Start/End: Original strand, 30605179 - 30605408
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttg-gacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||||||||||||||||||||||| || ||||| |||||||||| |||||   ||| |||| |||||||||| ||   ||||||||||||| |||||||    
T  30605179 atcagttgtggaatattcctaaagttgtgtttatattttaggaaatatttgaagttgttttgtgacgatcctaaag---atgttccgacattataggact 30605275  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    || ||||||||| |||||||| ||||||||| || || || | ||||||| |||||||||||||||||| |   ||||||||  ||| |||||||||       
T  30605276 ttccatatttgtttctaattcttgttttgcagatcagttgga-cgatctgttttgttctgaagcccaacaagtttatttgacttgagttgcttcagt--- 30605371  T
Q  221 atataagtgagacttcaagacctaatgaactattcaa 257  Q
    ||||||| |||||||||||||||||||||||||||||    
T  30605372 atataagggagacttcaagacctaatgaactattcaa 30605408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 38406032 - 38405838
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    |||||||||||||||||||||||||| | ||||| |||||||||| |||| |||||| ||||||||||||||   |  ||| ||||||||||||||||||    
T  38406032 atcagttgtggaatattcctaaagtaatgtttatattttaggaaatattttttattgttttggacgatccta---aaaatgatccgacattttaggactt 38405936  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    | ||||||||||||| |||| ||||||||| || | ||| | ||||||| |||||||||||||| ||||| | |||||||||| || ||||||||||||    
T  38405935 tccatatttgtctctgattcttgttttgcagatcatctgga-cgatctgttttgttctgaagccaaactagaatatttgacccaagatgcttcagtata 38405838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 23420045 - 23420212
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||| |||| |||||| || | ||||||||| |    ||||||||||||||||||||||    
T  23420045 atcagttgtggaatatttctaaagtagtttttatattttaggaaatatttattattggttggaacgatcctata---aatgttccgacattttaggactt 23420141  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaa 192  Q
    |   ||||||| ||| |||| ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  23420142 tcagtatttgtttctgattcttgttttgcagattagctgaaccgatctgctttgttctgaagcccaactaa 23420212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 257
Target Start/End: Original strand, 26328703 - 26328931
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    |||||||||| |||||||||||||| ||  |||| |||||| ||| ||||  | ||| |||||||| ||||| ||||   |||| |||||||||||||||    
T  26328703 atcagttgtgtaatattcctaaagttgtgattatattttagaaaatatttaatgttgttttggacgctcctaaagat---gttctgacattttaggactt 26328799  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||||||| |||| ||||||||| || ||||| | ||||||| |||||||||||||||||| | | ||||||||||  |||||||| ||||||    
T  26328800 tccatatttgtctctgattcttgttttgcagatcagctgga-cgatctgttttgttctgaagcccaacaataatatttgacccttgctgcttcggtataa 26328898  T
Q  222 tataagtgagacttcaagacctaatgaactattcaa 257  Q
       |||  |||| |||||||||||||||| ||||||    
T  26328899 ---aaggaagacatcaagacctaatgaaccattcaa 26328931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 101 - 257
Target Start/End: Complemental strand, 23624471 - 23624318
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtattt 199  Q
    ||||||| ||||||||||||||| | | ||||||||| |||| ||||||||| || ||||  | ||||||| ||||| |||||||||||| | |||||||    
T  23624471 atgttcctacattttaggacttttcttttttgtctctgattcctgttttgcagatcagctaga-cgatctgttttgtactgaagcccaacaagagtattt 23624373  T
Q  200 gacccgagctgcttcagtataatataagtgagacttcaagacctaatgaactattcaa 257  Q
    ||||||||||||||||||   ||||||  |||||||||||||||||||||||||||||    
T  23624372 gacccgagctgcttcagt---atataaaggagacttcaagacctaatgaactattcaa 23624318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 220
Target Start/End: Original strand, 23757751 - 23757939
Alignment:
Q  29 tgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacata 128  Q
    ||||||||||| |||||||||  ||||| |||||||||| ||||||||||| || | ||||||||| | ||   |||  |||||||||||||||| || |    
T  23757751 tgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaat---gttttgacattttaggactttccaga 23757847  T
Q  129 tttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    ||||| ||   |||| |||| ||| |||||||||| |||||||||||||  |||||||||||| ||||||||  ||| |||||||||||||||    
T  23757848 tttgtttcgggttcttgtttggcagattagctgaaccgatctgctttgtgttgaagcccaact-aagtatttatcccaagctgcttcagtata 23757939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 220
Target Start/End: Original strand, 23823207 - 23823395
Alignment:
Q  29 tgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacata 128  Q
    ||||||||||| |||||||||  ||||| |||||||||| ||||||||||| || | ||||||||| | ||   |||  |||||||||||||||| || |    
T  23823207 tgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaat---gttttgacattttaggactttccaga 23823303  T
Q  129 tttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    ||||| ||   |||| |||| ||| |||||||||| |||||||||||||  |||||||||||| ||||||||  ||| |||||||||||||||    
T  23823304 tttgtttcgggttcttgtttggcagattagctgaaccgatctgctttgtgttgaagcccaact-aagtatttatcccaagctgcttcagtata 23823395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 9422004 - 9422198
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| |||| |||||| ||||| |||  ||||| |||||||||| |||| |||||| || | ||||||||| | ||   ||||| ||||||||||||||    
T  9422004 atcagctgtgaaatatttctaaattagattttatattttaggaaatatttattattggttggaacgatcctataaat---gttccaacattttaggactt 9422100  T
Q  123 tacatatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    |  |  ||||| ||| ||||| |||||||| |||||||||| ||||||||||||| |||||| |||||| ||||||||  ||| | |||||||||||||    
T  9422101 tctagttttgtttctgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagtccaact-aagtatttagcccaaactgcttcagtata 9422198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 24190459 - 24190315
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaactaaagtat 197  Q
    ||||||||||||||||||||||| || |||||| ||| |||| ||||||||| ||| ||||||| |||||||| ||||| |||||||||||| | | |||    
T  24190459 atgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagcccaac-atattat 24190361  T
Q  198 ttgacccgagctgcttcagtataatataagtgagacttcaagacctaat 246  Q
    ||  ||| ||||||||||||   |||||||  |||||||||||||||||    
T  24190360 ttagcccaagctgcttcagt---atataaggaagacttcaagacctaat 24190315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 18221780 - 18221585
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    |||||||||| |||||||||||||| ||  |||| |||||| ||| |||||   ||| |||||||  ||||| ||||   ||||| ||||||||||||||    
T  18221780 atcagttgtgtaatattcctaaagttgtgattatattttagaaaatatttgaagttgttttggacattcctaaagat---gttcctacattttaggactt 18221684  T
Q  123 tacatatttgtctctaatt-ctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||||| | ||| ||||||  || || ||||| | | ||||| |||||||||||| ||||  ||| |||||||| |||||||||||| |||||    
T  18221683 tccatatttgtctatgattcctgtttcacagatcagctgga-caatctgttttgttctgaagaccaagaaaattatttgactcgagctgcttcattataa 18221585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 246
Target Start/End: Original strand, 22404278 - 22404468
Alignment:
Q  52 tttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatatttgtctctaattc-tgttttgc 150  Q
    ||||| |||||||||| |||| |||||| || | ||||||||| | |  ||||| |||||||||||||||||| | |||||| | | |||| ||||||||    
T  22404278 tttatattttaggaaatatttattattgtttggaacgatcctataaa--atgtttcgacattttaggactttatagatttgtttatgattcttgttttgc 22404375  T
Q  151 aaatt-agctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatataagtgagacttcaagacctaat 246  Q
    | ||| ||||||| |||||||| || | ||||||||||||  || |||||  ||| ||||||||||||   |||||||  |||||||||||||||||    
T  22404376 agattaagctgaaccgatctgcattttactgaagcccaac-gaattatttagcccaagctgcttcagt---atataaggaagacttcaagacctaat 22404468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 246
Target Start/End: Original strand, 22251535 - 22251747
Alignment:
Q  29 tgtggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacat 127  Q
    ||||||||||| ||||||| |||||| || |||||||||| ||||  ||||| |||| |||||| || | ||   ||| ||||||||||||||||| ||     
T  22251535 tgtggaatatttctaaagt-gtattttatattttaggaaatatttaatattgttttgaacgatcgtataaat---gttgcgacattttaggactttccag 22251630  T
Q  128 atttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatata 225  Q
    |||||| | | |||| ||||||||| ||| ||||||| | |||||| || | ||||||||||||  || |||||  ||| ||||||||||||   |||||    
T  22251631 atttgtttattattcttgttttgcagattaagctgaacctatctgcattttgctgaagcccaac-gaattatttagcccaagctgcttcagt---atata 22251726  T
Q  226 agtgagacttcaagacctaat 246  Q
    ||  |||||||||||||||||    
T  22251727 aggaagacttcaagacctaat 22251747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 22245855 - 22246012
Alignment:
Q  31 tggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatat 129  Q
    ||||||||| ||||||| |||||| || |||||||||| ||||  ||||| || | ||||||||| |   |||||||||||||||||||||||| || ||    
T  22245855 tggaatatttctaaagt-gtattttatattttaggaaatatttaatattgtttggaacgatcctata---catgttccgacattttaggactttccagat 22245950  T
Q  130 ttgtctctaattct-gttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaac 189  Q
    |||| | | ||||| |||||||| ||| || |||| |||||||| || | ||||||||||||    
T  22245951 ttgtttttgattctcgttttgcagattaagttgaaccgatctgcattttgctgaagcccaac 22246012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 25105023 - 25105101
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt 177  Q
    ||||||||||||||||||||||| || |||||| ||| |||| ||||||||| ||| ||||||| |||||||| |||||    
T  25105023 atgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgtt 25105101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 25164116 - 25164194
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt 177  Q
    ||||||||||||||||||||||| || |||||| ||| |||| ||||||||| ||| ||||||| |||||||| |||||    
T  25164116 atgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgtt 25164194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 7e-67; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 29545629 - 29545847
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||   ||||||||||||||||||||||    
T  29545629 atcagttgtggaatattcctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaag---atgttccgacattttaggactt 29545725  T
Q  123 tacatatttgtctct-aattctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||| ||| | |||||||||||| |||||||||| |||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||   |    
T  29545726 tccatatttgtttctgatttctgttttgcagattagctgaaccgatctgctttgttctaaagcccaactaaattatttggcccaagctgcttcagt---a 29545822  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    |||||| |||||||||| |||||||    
T  29545823 tataagggagacttcaaaacctaat 29545847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 246
Target Start/End: Complemental strand, 20992204 - 20991996
Alignment:
Q  33 gaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatatttg 132  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||  | | ||||||||| ||||   ||||||||||||||||||||| ||||||||    
T  20992204 gaatatttctaaagtagtatttatattttaggaaatatttgttattgggtggaacgatcctaaagat---gttccgacattttaggactttccatatttg 20992108  T
Q  133 tctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatataagtgag 231  Q
    | | | ||||| |||||||| |||||||||| ||||||||||||| ||||||||| ||||| ||||||  ||| || |||||||||   ||||||| |||    
T  20992107 tttatgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccgactaatgtatttatcccaagttgcttcagt---atataagggag 20992011  T
Q  232 acttcaagacctaat 246  Q
    |||||||||||||||    
T  20992010 acttcaagacctaat 20991996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 12326477 - 12326265
Alignment:
Q  29 tgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttgga-cgatcctagagatcatgttccgacattttaggactttacat 127  Q
    ||||||||||| |||||||||||||||| |||||| ||| ||||||||||  || | | |||||||| ||||   ||||||||||||||||||||| |||    
T  12326477 tgtggaatatttctaaagtagtatttatattttagaaaatatttgttatttgttggaaacgatcctaaagat---gttccgacattttaggactttccat 12326381  T
Q  128 atttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatataa 226  Q
    |||||| |||||||| ||||||| | |||||||||| ||||||||||||| || || |||||||||| |||||  ||| || |||||||||   ||||||    
T  12326380 atttgtttctaattcttgttttgaagattagctgaaccgatctgctttgtgctaaatcccaactaaa-tatttagcccaagatgcttcagt---atataa 12326285  T
Q  227 gtgagacttcaagacctaat 246  Q
    | ||||||| ||||||||||    
T  12326284 gggagactttaagacctaat 12326265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 4459410 - 4459216
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| |||||||||  ||||| |||| ||||| ||||||||||| || | ||||||||| |    ||||| ||||||||||||| ||    
T  4459410 atcagctgtggaatatttctaaagtagattttatatttttggaaatatttgttattggttggaacgatcctata---aatgtttcgacattttaggattt 4459314  T
Q  123 tacatatttgtctct-aattctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    | |||| |||| ||| | |||||||||||| |||||||||| |||||||||||||||||||||| || | ||||||||  ||| |||||||| ||||||    
T  4459313 tccataattgtttctgatttctgttttgcagattagctgaaccgatctgctttgttctgaagcctaaat-aagtatttagcccaagctgctttagtata 4459216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 16437446 - 16437251
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||||||||||| ||  |||| |||||||||| |||||   ||| |||||||| ||||| ||||   ||||| | ||||||||||||    
T  16437446 atcagttgtggaatattcctaaagttgtgattatattttaggaaatatttgaagttgttttggacgttcctaaagat---gttcctatattttaggactt 16437350  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||||| | |||| ||||||| | || ||||| |  |||||| |||||||||||||||| | | | ||||||||||| |||||||||||||||    
T  16437349 tccatatttgtctttgattcctgttttgtagatcagctggaa-gatctgttttgttctgaagcccagcaagaatatttgacccgtgctgcttcagtataa 16437251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 16207369 - 16207586
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||| ||||||| ||||||||   ||||| |||||||||| |||| |||||| || | ||||||||| | ||   ||||||| || |||||||||    
T  16207369 atcagttgtcgaatatttctaaagtatattttatattttaggaaatattttttattggttggaacgatcctataaat---gttccgatatgttaggactt 16207465  T
Q  123 tacatatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||| ||||||||| |||||||| ||||| ||   ||||||||||||| |||||||||| || ||||||||  ||| ||  ||||||||   |    
T  16207466 tccatatttgtttctaattcttgttttgcagattagttgtgccgatctgctttgtgctgaagcccacct-aagtatttagcccaagaagcttcagt---a 16207561  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    ||||||  |||||||||||||||||    
T  16207562 tataaggaagacttcaagacctaat 16207586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 220
Target Start/End: Complemental strand, 11999523 - 11999358
Alignment:
Q  52 tttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatatttgtctctaattct-gttttgc 150  Q
    ||||| |||||||||| |||| |||||| || | ||||||||| | ||   |||| |||||||||||||||| ||| ||||| ||  ||||| |||||||    
T  11999523 tttatattttaggaaatatttattattggttggaacgatcctataaat---gttctgacattttaggacttttcatttttgtttcatattcttgttttgc 11999427  T
Q  151 aaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    | |||||| ||| ||||||||||||| ||||||||||||| ||||||||  ||| |||||||||||||||    
T  11999426 agattagccgaaccgatctgctttgtgctgaagcccaact-aagtatttagcccaagctgcttcagtata 11999358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 11589061 - 11588917
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaactaaagtat 197  Q
    ||||||||||||||||||||||| || |||||| |||||||| ||||||||| ||| ||||||| |||||||||||||| ||||||||||||  || |||    
T  11589061 atgttccgacattttaggactttccagatttgtttctaattcttgttttgcagattaagctgaaccgatctgctttgttactgaagcccaac-gaattat 11588963  T
Q  198 ttgacccgagctgcttcagtataatataagtgagacttcaagacctaat 246  Q
    ||   || ||||||||||||   |||||||  |||||||||||||||||    
T  11588962 ttagaccaagctgcttcagt---atataaggaagacttcaagacctaat 11588917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 14927244 - 14927156
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaatt-ctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaac 189  Q
    ||||||| ||||||||||||||| ||||||||||||| ||| |||||||||| || ||||| | ||||||| ||||||||||||||||||    
T  14927244 atgttcctacattttaggactttccatatttgtctctgattcctgttttgcagatcagctgga-cgatctgttttgttctgaagcccaac 14927156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 15350710 - 15350622
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaatt-ctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaac 189  Q
    ||||||| ||||||||||||||| ||||||||||||| ||| |||||||||| || ||||| | ||||||| ||||||||||||||||||    
T  15350710 atgttcctacattttaggactttccatatttgtctctgattcctgttttgcagatcagctgga-cgatctgttttgttctgaagcccaac 15350622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 10280525 - 10280400
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||| ||||||||||||| ||  |||| |||||||||| |||||   ||| |||||||| ||||| ||   ||||||| ||||||||||||||    
T  10280525 atcagttgtggcatattcctaaagttgtgattatattttaggaaatatttgaagttgttttggacgttcctaaag---atgttcctacattttaggactt 10280429  T
Q  123 tacatatttgtctctaatt-ctgttttgc 150  Q
    |  || ||||||||||||| |||||||||    
T  10280428 tctatttttgtctctaattcctgttttgc 10280400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 11520904 - 11521119
Alignment:
Q  27 gttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttaca 126  Q
    ||||||||||||| ||||| |    ||||| |||||||||| |||| |||||| || | ||||||||| | ||   ||| ||||||||||||||||| ||    
T  11520904 gttgtggaatatttctaaattgtgttttatattttaggaaatatttattattgtttggaacgatcctataaat---gtttcgacattttaggactttcca 11521000  T
Q  127 tatttgtctctaattc-tgttttgcaaat-tagctgaatcgatctgctttgtt-ctgaagcccaactaaagtatttgacccgagctgcttcagtataata 223  Q
     |||||| ||| |||| ||||||||| ||  ||||||| |||||||| ||||| ||||||||||||  || |||||  ||| ||||||||||||   |||    
T  11521001 gatttgtttctgattcttgttttgcagatcaagctgaaccgatctgcattgttactgaagcccaac-gaattatttagcccaagctgcttcagt---ata 11521096  T
Q  224 taagtgagacttcaagacctaat 246  Q
    ||||  |||||||||||||||||    
T  11521097 taaggaagacttcaagacctaat 11521119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 246
Target Start/End: Complemental strand, 14165758 - 14165619
Alignment:
Q  104 ttccgacattttaggactttacatatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgac 202  Q
    |||||||||||||||||||| ||   |||| ||| ||||| |||||||| |||||||||| |||||||| ||||  |||||||||||  || |||||  |    
T  14165758 ttccgacattttaggactttccagcattgtttctgattcttgttttgcagattagctgaaccgatctgcattgtgttgaagcccaac-gaattatttagc 14165660  T
Q  203 ccgagctgcttcagtataatataagtgagacttcaagacctaat 246  Q
    || || |||||||||||||   |||  |||||||||||||||||    
T  14165659 ccaagttgcttcagtataa---aaggaagacttcaagacctaat 14165619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 645732 - 645641
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaac 189  Q
    ||||||||||||||||||||||| || |||| | ||| |||| ||||||||||||| ||||||| || ||||| ||||| ||||||||||||    
T  645732 atgttccgacattttaggactttccagatttatttctgattcttgttttgcaaattaagctgaaccggtctgcattgttactgaagcccaac 645641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 15506901 - 15506830
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatccta 94  Q
    ||||||||||||||||| ||||||||   ||||| |||||||||| ||||||||||| || | |||||||||    
T  15506901 atcagttgtggaatatttctaaagtatattttatattttaggaaatatttgttattggttggaacgatccta 15506830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 162
Target Start/End: Complemental strand, 15438739 - 15438611
Alignment:
Q  31 tggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatatt 130  Q
    ||||||||| ||||||||   ||||| |||||||||| |||||||||||  ||| ||||||||| |    ||||| |||||||||| || ||| ||||||    
T  15438739 tggaatatttctaaagtatattttatattttaggaaatatttgttattg-gttgaacgatcctata---aatgtttcgacattttaagagtttccatatt 15438644  T
Q  131 tgtctctaattc-tgttttgcaaattagctgaa 162  Q
    ||| ||| |||| ||||||||| ||||||||||    
T  15438643 tgtttctgattcttgttttgcagattagctgaa 15438611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 26 - 220
Target Start/End: Original strand, 11667394 - 11667586
Alignment:
Q  26 agttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttac 125  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||   ||||| | ||||||||||| ||| |    
T  11667394 agttgtggaatatttctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaag---atgttacaacattttaggattttcc 11667490  T
Q  126 atatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    |||||||| |||||||| |||||||||  |||||||||  ||||||||||||| ||||||||||||||||||||||  || |||||||||||||||    
T  11667491 atatttgtttctaattcttgttttgcaggttagctgaactgatctgctttgttttgaagcccaactaaagtatttggtccaagctgcttcagtata 11667586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 24986654 - 24986436
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||| ||||||| ||| |||| |||||| || ||||   ||||||||||||||||||||    
T  24986654 atcagttgtggaatatttctaaagtaatatttatattttaggaaatatttgtttttgttttgaacgatcataaagat---gttccgacattttaggactt 24986558  T
Q  123 tacatatttgtctctaatt-ctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||| ||| ||| |||||||| | |||||||||| |||| |||||| ||||||||| ||||||||||||||  ||| ||||||||||||   |    
T  24986557 tccatatttgtttctgatttctgttttgtagattagctgaaccgatttgcttttttctgaagcgcaactaaagtatttagcccaagctgcttcagt---a 24986461  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    |||||| ||||||||||||||||||    
T  24986460 tataagggagacttcaagacctaat 24986436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 20840752 - 20840919
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||| |||||||||  ||||| |||||||||| ||||||||||| || | ||||||||| |    ||||||||||||||||||||||    
T  20840752 atcagttgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctata---aatgttccgacattttaggactt 20840848  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaa 192  Q
    | ||||||||| ||| |||| ||||||| | ||||||||||  |||||||||||| |||||||||||||||    
T  20840849 tccatatttgtttctgattcttgttttgtagattagctgaactgatctgctttgtactgaagcccaactaa 20840919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 27 - 220
Target Start/End: Complemental strand, 4246703 - 4246513
Alignment:
Q  27 gttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttaca 126  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||| |||||| || | |||||| ||  ||  |||||||||||||||||||||||  |    
T  4246703 gttgtggaatatttctaaagtagattttatattttaggaaatatttattattggttggaacgatcttat-ga--atgttccgacattttaggactttcaa 4246607  T
Q  127 tatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    ||||||| ||| ||||| |||||||| |||||||||| ||||||||||||| ||||||||||||| || |||||  ||| |||||||||||||||    
T  4246606 tatttgtttctgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccaact-aattatttagcccaagctgcttcagtata 4246513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 20200576 - 20200769
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||| || | ||||||||| |    ||||||| | ||||||||||||    
T  20200576 atcagttgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctata---aatgttccaatattttaggactt 20200671  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    |  | |||||| | | |||| ||||||||| |||||||||| ||||||||||||| |||||||| |||| ||||||||  ||  |||||||||||||||    
T  20200672 tctaaatttgtatatgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcctaact-aagtatttagcctaagctgcttcagtata 20200769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 246
Target Start/End: Original strand, 26971959 - 26972106
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaactaaagtat 197  Q
    ||||||||||||||||| ||||| ||||||||| | | |||| ||||||||| ||| ||||||| |||||||| ||||| || ||||||||| ||| |||    
T  26971959 atgttccgacattttagaactttccatatttgtttatgattcttgttttgcagattaagctgaaccgatctgcattgttactaaagcccaac-aaattat 26972057  T
Q  198 ttgacccgagctgcttcagtataatataagtgagacttcaagacctaat 246  Q
    ||  ||| |||||||||||||||  |||||  |||||||||||||||||    
T  26972058 ttagcccaagctgcttcagtatataataaggaagacttcaagacctaat 26972106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 13166065 - 13165901
Alignment:
Q  23 atcagttgtggaatattcctaaagtagta-tttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||||||||||||||| ||||||| ||| ||||| |||||||||| |||| |||||| || | ||||||||| | |||   |||||||  |||||||||    
T  13166065 atcagttgtggaatatttctaaagt-gtattttatattttaggaaatatttattattgtttggaacgatcctataaatc---ttccgactctttaggact 13165970  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaa 188  Q
    || || |||||| |||||||| ||||||||| ||| ||||||| |||||||| || | |||||||||||    
T  13165969 ttccagatttgtttctaattcttgttttgcagattaagctgaaccgatctgcattttactgaagcccaa 13165901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 23477423 - 23477532
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    |||| |||||||||||||||||||| ||  |||| |||||||||| |||||   |||||||||||| ||||| ||   ||||| | ||||| ||||||||    
T  23477423 atcaattgtggaatattcctaaagttgtgattatattttaggaaatatttgaagttgatttggacgttcctaaag---atgtttctacattgtaggactt 23477519  T
Q  123 tacatatttgtct 135  Q
    | |||||||||||    
T  23477520 tccatatttgtct 23477532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 17850949 - 17851027
Alignment:
Q  111 attttaggactttacatatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaac 189  Q
    ||||||||||||| ||| ||| ||||| ||||| |||||||| |||||||| | |||| |||||||||||||||||||||    
T  17850949 attttaggactttccatttttatctctgattcttgttttgcagattagctgga-cgatttgctttgttctgaagcccaac 17851027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 97; Significance: 9e-48; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 7026 - 7244
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||| ||||||||||| || | ||||||||| ||   ||||||| ||||||||||||||    
T  7026 atcagttctggaatatttctaaagtagtatttatattttaggaaatatttgttattggttggaacgatcctaaag---atgttccaacattttaggactt 7122  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||| |||  ||| |||||| || |||||| ||| |||||| |||||| ||||||||||| ||||||||||  ||||||||||||||||   |    
T  7123 tccatatttgtttctggttcttgtttttcagattagccgaaccgatctactttgtactgaagcccaaataaagtatttagcccgagctgcttcagt---a 7219  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    |||||| ||||||||||||||||||    
T  7220 tataagggagacttcaagacctaat 7244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 242
Target Start/End: Original strand, 17621 - 17827
Alignment:
Q  31 tggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatatt 130  Q
    ||||||||| |||||||||||||||| |||||||||| |||| |||||| || | | ||||||| ||||   ||||| ||||||||||||||| ||||||    
T  17621 tggaatatttctaaagtagtatttatattttaggaaatattttttattggttggaatgatcctaaagat---gttccaacattttaggacttttcatatt 17717  T
Q  131 tgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatataagtg 229  Q
    ||| | | ||||| |||||||| | |||||||| ||||||||||||| | |||||||||||||| |||||  ||| ||||||||||||   ||||||| |    
T  17718 tgtttatgattcttgttttgcagaatagctgaaccgatctgctttgtaccgaagcccaactaaactatttagcccaagctgcttcagt---atataaggg 17814  T
Q  230 agacttcaagacc 242  Q
    |||||||||||||    
T  17815 agacttcaagacc 17827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 31 - 242
Target Start/End: Original strand, 27015 - 27221
Alignment:
Q  31 tggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatatt 130  Q
    ||||||||| |||||||||||||||| |||||||||| |||| |||||| || | | ||||||| ||||   ||||| ||||||||||||||| ||||||    
T  27015 tggaatatttctaaagtagtatttatattttaggaaatattttttattggttggaatgatcctaaagat---gttccaacattttaggacttttcatatt 27111  T
Q  131 tgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatataagtg 229  Q
    ||| | | ||||| |||||||| | |||||||| ||||||||||||| | |||||||||||||| |||||  ||| ||||||||||||   ||||||| |    
T  27112 tgtttatgattcttgttttgcagaatagctgaaccgatctgctttgtaccgaagcccaactaaactatttagcccaagctgcttcagt---atataaggg 27208  T
Q  230 agacttcaagacc 242  Q
    |||||||||||||    
T  27209 agacttcaagacc 27221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 9e-48; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 18063695 - 18063890
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| || |||||||| |||||||||||||||| |||||||||| ||||  ||||| |||||||| | ||| ||||   ||| ||||||||||||||||    
T  18063695 atcagctgaggaatatttctaaagtagtatttatattttaggaaatatttaatattgttttggacgtttctaaagat---gtttcgacattttaggactt 18063791  T
Q  123 tacatatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    | ||||||||||||||||||| |||||||| ||||||| || ||||||||||||| |||||||||||||| | |||||| |||||||||||||||||||    
T  18063792 tccatatttgtctctaattcttgttttgcagattagctaaaccgatctgctttgtgctgaagcccaactagaatatttggcccgagctgcttcagtata 18063890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 30 - 220
Target Start/End: Complemental strand, 296105 - 295918
Alignment:
Q  30 gtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatat 129  Q
    |||||||||||||||||| | |||||| |||||||||| ||||||||||| |||||||||||||| ||   ||||||||||||||||||||||| |||||    
T  296105 gtggaatattcctaaagttgcatttatattttaggaaatatttgttattgttttggacgatcctaaag---atgttccgacattttaggactttccatat 296009  T
Q  130 ttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    |||||||| |||| ||||||||| || | ||| | ||||||| |||||||||||||||||| | ||||||||||||||| ||||||| ||||    
T  296008 ttgtctctgattcttgttttgcagatcaactgga-cgatctgttttgttctgaagcccaacaagagtatttgacccgagatgcttcaatata 295918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 220
Target Start/End: Complemental strand, 18548313 - 18548125
Alignment:
Q  29 tgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacata 128  Q
    ||||||||||| |||||||||   |||| |||||||||| |||| |||||| || | ||||||||  | ||   ||||||||||||||||||||| || |    
T  18548313 tgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaacgatcctgtaaat---gttccgacattttaggactttccaga 18548217  T
Q  129 tttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    ||||| ||| |||| ||||||||| |||||||||| |||| |||||||| |||||||||| ||||| |||||  ||| |||||||||||||||    
T  18548216 tttgtttctgattcttgttttgcagattagctgaaccgatttgctttgtgctgaagcccatctaaa-tatttagcccaagctgcttcagtata 18548125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 41 - 246
Target Start/End: Complemental strand, 44453135 - 44452936
Alignment:
Q  41 ctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatatttgtctctaat 140  Q
    |||||||||  ||||| |||||||||| |||| |||||| || | || |||||| | ||   ||||||||||||||||||||| ||  ||||| ||| ||    
T  44453135 ctaaagtagattttatattttaggaaatatttattattggttggaacaatcctataaat---gttccgacattttaggacttttcagttttgtttctgat 44453039  T
Q  141 tct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatataagtgagacttcaag 239  Q
    ||| |||||||| |||||||||| |||||| |||||| ||||||||||||| ||||||||  ||| ||||||||||||   |||||||  ||||||||||    
T  44453038 tcttgttttgcagattagctgaaccgatctactttgtgctgaagcccaact-aagtatttagcccaagctgcttcagt---atataagaaagacttcaag 44452943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 249
Target Start/End: Complemental strand, 28051813 - 28051589
Alignment:
Q  23 atcagttgtggaatattcctaaagtagt----atttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttagg 118  Q
    ||||||||||||||||||||||||| ||    || ||| |||||||||| |||||   ||| |||||||| ||||| ||||   ||||||||||||||||    
T  28051813 atcagttgtggaatattcctaaagttgtgattatatatattttaggaaatatttgaagttgttttggacgctcctaaagat---gttccgacattttagg 28051717  T
Q  119 actttacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagt 217  Q
    ||||| ||||||||| ||| |||| ||||||||| ||  | || | ||||||| |||||||||||||  ||| | | ||||||| ||||| |||||||||    
T  28051716 actttccatatttgtttctgattcttgttttgcagatctgttgga-cgatctgttttgttctgaagcataacaagattatttgatccgagttgcttcagt 28051618  T
Q  218 ataatataagtgagacttcaagacctaatgaa 249  Q
    || |||| |||  |||||||||||||||||||    
T  28051617 at-atatgagt--gacttcaagacctaatgaa 28051589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 19634551 - 19634334
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| |||||||||   |||| |||||||||| |||| |||||| || | | ||| ||| | ||   ||||||||||||||||||||    
T  19634551 atcagctgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaatgattctataaat---gttccgacattttaggactt 19634455  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | || |||||| ||| |||| |||||||||  || ||||||| |||| ||||||| ||||||||||||| ||||||||  ||| || |||||||||   |    
T  19634454 tccagatttgtttctgattcttgttttgcaggtttgctgaattgatcagctttgtgctgaagcccaact-aagtatttagcccaagttgcttcagt---a 19634359  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    ||||||  |||||||||||||||||    
T  19634358 tataaggaagacttcaagacctaat 19634334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 184
Target Start/End: Original strand, 13515107 - 13515266
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||| | |||||||  ||||| |||||||||| ||||||||||| || | ||||||||| |    ||||| |||||||||||| |||    
T  13515107 atcagttgtggaatatttcaaaagtagattttatattttaggaaatatttgttattggttggaacgatcctata---aatgttacgacattttaggcctt 13515203  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagc 184  Q
    | ||||||||| | | |||| ||||||||| |||||||||  |||||| |||||| |||||||    
T  13515204 tccatatttgtttatgattcttgttttgcagattagctgagccgatctactttgtgctgaagc 13515266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 13791348 - 13791130
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||| ||||||||    |||| |||||||||| |||| |||||| || | || |||||| |    |||||| |||||||||||||||    
T  13791348 atcagttgtggaatatttctaaagtaaatattatattttaggaaatatttattattgtttggaacaatcctata---aatgttctgacattttaggactt 13791252  T
Q  123 tacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    | || |||||| |||||||| ||||||||| ||| ||||||| |||||||| || | ||||||||||||  |  |||||  ||| ||||||||||||       
T  13791251 tccagatttgtttctaattcttgttttgcagattaagctgaaccgatctgcattttgctgaagcccaac-gatttatttagcccaagctgcttcagt--- 13791156  T
Q  221 atataagtgagacttcaagacctaat 246  Q
    |||||||  |||||||||||||||||    
T  13791155 atataaggaagacttcaagacctaat 13791130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 21253485 - 21253647
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    |||||||||| |||||||||||||  ||  |||| |||||||||| |||||    || |||||||| ||||| ||||   ||||  | |||||| |||||    
T  21253485 atcagttgtgtaatattcctaaagatgtgattatattttaggaaatatttgaagctgttttggacgttcctaaagat---gttcttatattttatgactt 21253581  T
Q  123 tacatatttgtctctaattctg-ttttgcaaattagctgaatcgatctgctttgttctgaagcccaa 188  Q
    | ||| ||||||||| || ||| ||||||| |||||||| | |||||||||||||||||||||||||    
T  21253582 tccatttttgtctctgatactggttttgcagattagctgga-cgatctgctttgttctgaagcccaa 21253647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 18482861 - 18483079
Alignment:
Q  23 atcagttgtggaatattcctaaagtagta-tttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    |||| |||||||||||| ||||||| ||| ||||| |||||||||| |||| || ||| || | ||||||||| |    |||||| ||||||||||||||    
T  18482861 atcaattgtggaatatttctaaagt-gtattttatattttaggaaatatttattcttgtttggaacgatcctata---aatgttctgacattttaggact 18482956  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtat 219  Q
    || || |||||| ||  |||| ||||||||| ||| ||||||| |||||||| || | |||||||| |||  || |||||  ||| ||||||||||||      
T  18482957 tttcagatttgtttccgattcttgttttgcagattaagctgaaccgatctgcattatgctgaagccaaac-gaattatttagcccaagctgcttcagt-- 18483053  T
Q  220 aatataagtgagacttcaagacctaat 246  Q
     |||||||  |||||||||||||||||    
T  18483054 -atataaggaagacttcaagacctaat 18483079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 24196196 - 24195977
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| ||||||||||| ||||||| |||||| || |||||||||| ||||  ||||| || | ||||||||| | ||    ||||||||||||||||||    
T  24196196 atcagctgtggaatatttctaaagt-gtattttatattttaggaaatatttaatattgtttggaacgatcctataaata---ttccgacattttaggact 24196101  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaactaaagtatttgacccgagctgcttcagta 218  Q
    || || |||||| ||| |||| ||||||||| ||| |||||||  ||||| | ||||| ||||| |||||| | | |||||  ||| ||||||||||||     
T  24196100 tttcaaatttgtttctgattcttgttttgcagattaagctgaactgatctacattgttactgaaacccaac-atattatttagcccaagctgcttcagt- 24196003  T
Q  219 taatataagtgagacttcaagacctaat 246  Q
      |||||||  |||||||||||||||||    
T  24196002 --atataaggaagacttcaagacctaat 24195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 23954046 - 23954212
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| ||||||||||| ||||||| |||||| || |||||||||| ||||  ||||| || | ||||| ||| | ||   |||||||||||||||||||    
T  23954046 atcagctgtggaatatttctaaagt-gtattttatattttaggaaatatttaatattgtttggaacgatactataaat---gttccgacattttaggact 23954141  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaac 189  Q
    || || |||||| | | |||| ||||||||| ||| ||||||| |||||| | ||||| ||||||||||||    
T  23954142 ttccagatttgtttttgattcttgttttgcagattaagctgaaccgatctccattgttactgaagcccaac 23954212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 7028634 - 7028725
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaac 189  Q
    ||||||||||||||||||||||| || |||||| ||| |||| ||||||||| ||| || |||| |||||||| || || ||||||||||||    
T  7028634 atgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagttgaaccgatctgcattattactgaagcccaac 7028725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 17135633 - 17135851
Alignment:
Q  23 atcagttgtggaatattcctaaagtagta-tttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| ||||||||||| ||||||| ||| ||||| |||||||||| ||||  ||||| || | ||||||||| |    ||||||||||||||||| |||    
T  17135633 atcagctgtggaatatttctaaagt-gtattttatattttaggaaatatttaatattgtttggaacgatcctata---aatgttccgacattttagaact 17135728  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaactaaagtatttgacccgagctgcttcagta 218  Q
    || || |||||| | | |||| ||||||| | ||| |||| || | |||||| ||||| ||||||||||||  || |||||  ||| |||||||||||||    
T  17135729 ttccagatttgtttttgattcttgttttgaagattaagctaaaccaatctgcattgttactgaagcccaac-gaattatttagcccaagctgcttcagta 17135827  T
Q  219 taatataagtgagacttcaagacctaat 246  Q
    ||  |||    |||||||||||||||||    
T  17135828 tataata----agacttcaagacctaat 17135851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 20465382 - 20465594
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||| ||||||||||| || | ||||||||| ||   ||||||||||||||||||||||    
T  20465382 atcagctgtggaatatttctaaagtagtatttatattttaggaaatatttgttattggttggaacgatcctaaag---atgttccgacattttaggactt 20465478  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||| | | |||| ||||||||| ||||||||||  ||||||||||||  |||||||||||||||||||||  ||| ||||||| ||||   |    
T  20465479 tccatatttgtttatgattcttgttttgcagattagctgaactgatctgctttgtgttgaagcccaactaaagtatttagcccaagctgctacagt---a 20465575  T
Q  222 tataagtgagacttcaaga 240  Q
    |||||| ||||||||||||    
T  20465576 tataagggagacttcaaga 20465594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 12039196 - 12039414
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||||| ||   ||||||||||||||||||||||    
T  12039196 atcagctgtggaatatttctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaag---atgttccgacattttaggactt 12039292  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||| | | |||| | ||||||| ||||||||||  ||||||||||||  ||||||  |||||| ||||||   || |||||||| |||   |    
T  12039293 tccatatttgtttatgattcttattttgcatattagctgaactgatctgctttgtgttgaagcataactaatgtatttagtccaagctgctttagt---a 12039389  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    |||||| ||||||||||||||||||    
T  12039390 tataagggagacttcaagacctaat 12039414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 199
Target Start/End: Complemental strand, 20653740 - 20653566
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| |||||||| ||||||| ||||| |||| ||||||||||| |||||||||||||| ||   ||||||| ||||||||||||||    
T  20653740 atcagctgtggaatatttctaaagtaatatttatattttaagaaatatttgttattgttttggacgatcctaaag---atgttccaacattttaggactt 20653644  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtattt 199  Q
    | ||||||||| ||| |||| ||||||||| ||||||||||  ||||||||||||  |||||||||||||| ||||||    
T  20653643 tccatatttgtttctgattcttgttttgcatattagctgaactgatctgctttgtgttgaagcccaactaatgtattt 20653566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 25806079 - 25805884
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    |||| ||| ||||||||  |||||||| |||||| |||||||| | ||||  ||||| ||| |||||||||| ||||   ||||||||| ||||||||||    
T  25806079 atcaattgaggaatatttttaaagtagcatttatattttaggagatatttaatattgttttagacgatcctaaagat---gttccgacactttaggactt 25805983  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    | ||||||||||||| |||| ||||||||| |||||||||| ||||||||||||| |||||||||||||| | || ||| |||||||| ||||||||||    
T  25805982 tccatatttgtctctgattcctgttttgcagattagctgaaccgatctgctttgtgctgaagcccaactagaatacttggcccgagctacttcagtata 25805884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 19077814 - 19077597
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| |||||||||  ||||| |||||||||| |||| |||||| || | ||||| ||| |    ||||||||||||||||||||||    
T  19077814 atcagctgtggaatatttctaaagtagattttatattttaggaaatatttattattggttggaacgatactata---aatgttccgacattttaggactt 19077718  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | | ||||||| ||| |||| ||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||| |  ||| ||||||||||||   |    
T  19077717 tccctatttgtttctgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccaact-aagtatctagcccaagctgcttcagt---a 19077622  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    ||||||  |||||||||||||||||    
T  19077621 tataaggaagacttcaagacctaat 19077597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 29253170 - 29253365
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||||||||||||||  |||| |||||||||| |||||    || ||| |||| |||||  |||   ||||| ||||||||||||||    
T  29253170 atcagttgtggaatattcctaaagtagtgattatattttaggaaatatttgaagctgttttagacgttcctaacgat---gttcctacattttaggactt 29253266  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||||||| |||| ||||||||| || ||||| | ||||||| |||||| ||||||||||| | | |||||||||||||||||||||||||||    
T  29253267 tccatatttgtctctgattcctgttttgcagatcagctgga-cgatctgttttgttttgaagcccaacaagaatatttgacccgagctgcttcagtataa 29253365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 29 - 246
Target Start/End: Original strand, 8465161 - 8465377
Alignment:
Q  29 tgtggaatattcctaaagtagtatttatttt---ttaggaaacatttgttattgatttgga-cgatcctagagatcatgttccgacattttaggacttta 124  Q
    ||||||||| | |||||||||||||||| ||   |||||||  ||||||||||  || ||| |||||||| ||||   |||| ||||||||||||||||     
T  8465161 tgtggaatacttctaaagtagtatttatattattttaggaactatttgttatttgttgggaacgatcctaaagat---gttctgacattttaggactttc 8465257  T
Q  125 catatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataata 223  Q
    ||||||||| ||| ||||| |||||||| |||||||||| |||| |||||||| ||||||||||||||| | ||||  ||| ||||||||||||   |||    
T  8465258 catatttgtttctgattcttgttttgcagattagctgaaccgatatgctttgtactgaagcccaactaatgaatttagcccaagctgcttcagt---ata 8465354  T
Q  224 taagtgagacttcaagacctaat 246  Q
    |||| ||||||||||||||||||    
T  8465355 taagggagacttcaagacctaat 8465377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 19100568 - 19100373
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| | |||||||  ||||| |||||||||| |||| |||||| || | ||||||||| |    ||||||||||||||||||||||    
T  19100568 atcagctgtggaatatttccaaagtagattttatattttaggaaatatttattattggttggaacgatcctata---aatgttccgacattttaggactt 19100472  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | || |||||| | | |||| ||||||||| |||||||||| ||||||||||||| |||||||||||||  |||||||  ||| ||||||||||||||||    
T  19100471 tccagatttgtttatgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccaact-tagtatttagcccaagctgcttcagtataa 19100373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 13195995 - 13195801
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| |||||||||   |||| |||||||||| |||| |||||| || | ||||||||| | || |||  |||||||||||||||||    
T  13195995 atcagctgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaacgatcctataaat-atg--ccgacattttaggactt 13195899  T
Q  123 tacatatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    | || |||||| ||| ||||| |||||||| |||||| ||| ||||||||||||| ||||||||||||| ||||||||  ||| |||||||||||||||    
T  13195898 ttcagatttgtttctgattcttgttttgcagattagcagaaccgatctgctttgtgctgaagcccaact-aagtatttagcccaagctgcttcagtata 13195801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 17863963 - 17864079
Alignment:
Q  24 tcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggacttt 123  Q
    |||||||||||||||| |||||||| ||||||| |||||| ||| ||||||||||| ||||||||||||||   || |||||||||||||||||||||||    
T  17863963 tcagttgtggaatatttctaaagtaatatttatattttagaaaatatttgttattgttttggacgatccta---atgatgttccgacattttaggacttt 17864059  T
Q  124 acatatttgtctctaattct 143  Q
     ||||||||| ||| |||||    
T  17864060 ccatatttgtttctgattct 17864079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 20989278 - 20989445
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||| |||||||||  ||||| |||||||||| ||||||||||| || | |||||| || |    ||||||||| |||||| |||||    
T  20989278 atcagttgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcttata---aatgttccgatattttacgactt 20989374  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaa 192  Q
    | ||||| ||| |||||||| |||||| |  |||||||||| ||||||||||||| |||||||||||||||    
T  20989375 tccatatctgtttctaattcttgtttttctgattagctgaaccgatctgctttgtgctgaagcccaactaa 20989445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 17876245 - 17876394
Alignment:
Q  26 agttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttac 125  Q
    |||||||||||||| |||||||| ||||||| ||||||||||  |||||||||  ||||  |||||||| ||   |||||||||||||||||||||||      
T  17876245 agttgtggaatatttctaaagtaatatttatattttaggaaatgtttgttatttttttgttcgatcctaaag---atgttccgacattttaggactttcg 17876341  T
Q  126 atatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgtt 177  Q
    |||||||| | | |||| ||||||||| |||||||||| ||||||||||||||    
T  17876342 atatttgtttttgattcttgttttgcagattagctgaaccgatctgctttgtt 17876394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 220
Target Start/End: Original strand, 13869893 - 13870084
Alignment:
Q  26 agttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttac 125  Q
    |||||||||||||| |||||||||   |||| |||||||||| |||| |||||| || | ||||||||| |    |||||||||||||||||||||||      
T  13869893 agttgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttagaacgatcctata---aatgttccgacattttaggactttca 13869989  T
Q  126 atatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    | |||||| ||| |||| ||||||||| |||||||||| |||| |||||||| |||||||||||| ||| |||||  |||| ||| ||||||||||    
T  13869990 agatttgtttctgattcttgttttgcagattagctgaaccgatgtgctttgtgctgaagcccaac-aaattatttagcccgtgctacttcagtata 13870084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 220
Target Start/End: Original strand, 12028631 - 12028825
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| |||||||||  ||||| |||| | ||| |||||||||||  | | |||||| || | ||   ||||||||||||||||||||    
T  12028631 atcagctgtggaatatttctaaagtagattttatattttggcaaatatttgttattggctggaacgatcttataaat---gttccgacattttaggactt 12028727  T
Q  123 tacatatttgtctct-aattctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    | ||||||||| ||| |||||||||||||| |||||||||| ||||||||||| | || |||||||||  ||||||||   || |||||||||||||||    
T  12028728 ttcatatttgtttctgaattctgttttgcagattagctgaaccgatctgctttttactaaagcccaac-gaagtatttagtccaagctgcttcagtata 12028825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 33666462 - 33666245
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||||||||||||||| ||||||| |||||| || |||||||||| |||| |||||| || | ||||||||| |    |||||||||||||||||||||    
T  33666462 atcagttgtggaatatttctaaagt-gtattttatattttaggaaatatttattattgtttggaacgatcctata----atgttccgacattttaggact 33666368  T
Q  122 ttacatatttgtctctaatt-ctgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtat 219  Q
    || || |||||| ||| |||  ||||||||| ||| ||||||| |||||||| || | |||||||||||| ||| |||||  ||| ||||||||||||      
T  33666367 ttccagatttgtttctgattattgttttgcagattaagctgaaccgatctgcattttgctgaagcccaac-aaattatttagcccaagctgcttcagt-- 33666271  T
Q  220 aatataagtgagacttcaagacctaat 246  Q
     |||||||  |||||||||||||||||    
T  33666270 -atataaggaagacttcaagacctaat 33666245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 17235265 - 17235101
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| ||||| |||   |||| |||||||||| |||| |||||| || | | ||||||| |    ||||||||||||||||||||||    
T  17235265 atcagatgtggaatatttctaaattagatattatattttaggaaatatttattattgtttggaatgatcctata---aatgttccgacattttaggactt 17235169  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaac 189  Q
    | || |||||| ||| |||| ||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  17235168 tccagatttgtttctgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccaac 17235101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 23882186 - 23882349
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||||||||||  ||  |||| |||||||||| |||||    || |||||||| ||||| ||   ||||||| ||||||||||||||    
T  23882186 atcagttgtggaatattcctaaagatgtgattatattttaggaaatatttgaagctgttttggacgttcctaaag---atgttcctacattttaggactt 23882282  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaac 189  Q
    | || |||| ||||| |||| |||| |||| |||||||||| |||| |||||||||||||| ||||||    
T  23882283 tccaaatttttctctgattcttgttatgcagattagctgaa-cgatttgctttgttctgaaacccaac 23882349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 247
Target Start/End: Complemental strand, 23879556 - 23879337
Alignment:
Q  23 atcagttgtggaatattcctaaagtagta-tttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||||||||||||||| ||||||| ||| ||||| |||| ||||| ||||  ||||| || | ||||||||| |    |||||||||||||||||||||    
T  23879556 atcagttgtggaatatttctaaagt-gtattttatattttgggaaatatttaatattgtttggaacgatcctata---aatgttccgacattttaggact 23879461  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtat 219  Q
    || || |||||| ||| |||| ||||||||| ||| ||||||| |||||||| || |  |||||||||||  || |||||  ||| |||||||||||       
T  23879460 ttccagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattttgttgaagcccaac-gaattatttagcccaagctgcttcag--- 23879365  T
Q  220 aatataagtgagacttcaagacctaatg 247  Q
     |||||||  ||||||||||||||||||    
T  23879364 catataaggaagacttcaagacctaatg 23879337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 21706018 - 21706182
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggac-gatcctagagatcatgttccgacattttaggact 121  Q
    ||||||||||||||||| |||||||||   |||| |||||||||| |||| ||||| |||||||  ||||||| | ||   |||||||||||||||||||    
T  21706018 atcagttgtggaatatttctaaagtagatattatattttaggaaatatttattatt-atttggaatgatcctataaat---gttccgacattttaggact 21706113  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaac 189  Q
    || || ||| |||||| |||| ||||||| | ||||| ||||   ||||||||||  ||||||||||||    
T  21706114 ttccagattagtctctgattcatgttttgtagattagttgaactaatctgctttgcactgaagcccaac 21706182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 28623142 - 28623217
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaatt-ctgttttgcaaattagctgaatcgatctgctttg 175  Q
    ||||||||||||||||||||||| ||| ||||| | | ||| |||||||||| |||||||||| ||||||||||||    
T  28623142 atgttccgacattttaggactttccatctttgtttatgatttctgttttgcagattagctgaaccgatctgctttg 28623217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 220
Target Start/End: Complemental strand, 19172086 - 19171893
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| || |||| ||| |||||||||  ||||| |||||||||| |||| |||||| || | ||||||||| | ||   |||||||  |||||||||||    
T  19172086 atcagctgcggaacatttctaaagtagattttatattttaggaaatatttattattggttggaacgatcctataaat---gttccgaatttttaggactt 19171990  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    |  |  ||| | ||| |||| ||||||| | |||||||||| | ||||||||||| ||||||||||||| ||||||||  ||| ||| |||||||||||    
T  19171989 tcgagtttttt-tctgattcatgttttgtagattagctgaaccaatctgctttgtgctgaagcccaact-aagtatttagcccaagccgcttcagtata 19171893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 19894161 - 19894375
Alignment:
Q  26 agttgtggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggacttta 124  Q
    |||||||||||||| ||||||| |||||| |  || ||| ||| |||| |||||| |||| ||||||||| |   ||| ||||||||||||||||||||     
T  19894161 agttgtggaatatttctaaagt-gtattttacattatagaaaatatttattattgttttgaacgatcctata---cattttccgacattttaggactttc 19894256  T
Q  125 catatttgtctctaatt-ctgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataat 222  Q
    || |||||| ||| |||  ||||||||| ||| ||||||| ||| |||| || | |||||||||||| ||  | |||  ||| ||||||||||||   ||    
T  19894257 cagatttgtttctgattattgttttgcagattaagctgaaccgaactgcattttactgaagcccaacgaa--tttttagcccaagctgcttcagt---at 19894351  T
Q  223 ataagtgagacttcaagacctaat 246  Q
    |||||  |||||||||||||||||    
T  19894352 ataaggaagacttcaagacctaat 19894375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 9281198 - 9281363
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| |||| |||||| ||||||| |||||| || |||||||||| |||| |||||| || | ||||||||| | ||   ||||||||||||||| |||    
T  9281198 atcagctgtgaaatatttctaaagt-gtattttatgttttaggaaatatttattattgtttagaacgatcctataaat---gttccgacattttagaact 9281293  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaac 189  Q
    || || |||||| ||| |||| |||||| || ||| ||||||| |||||||| || | ||||||||||||    
T  9281294 ttccagatttgtttctgattcttgttttacagattaagctgaaccgatctgcattttactgaagcccaac 9281363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 15930411 - 15930498
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaa 188  Q
    ||||||| |||||||||||||||  |||||||||||| |||| ||||||||| || || || | |||||||||||||| | ||||||||    
T  15930411 atgttcctacattttaggactttctatatttgtctctgattcgtgttttgcagatcagttgga-cgatctgctttgttttaaagcccaa 15930498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 17855866 - 17855701
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| ||||||||||| | ||||| |||||| || |||||||||| |||| |||||| |  | ||||||||| | ||   |||||||||||||||||||    
T  17855866 atcagctgtggaatatttcgaaagt-gtattttatattttaggaaatatttattattgttcggaacgatcctataaat---gttccgacattttaggact 17855771  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaac 189  Q
    || || |||||| |||  ||| ||||||||| ||| ||||||| |||||||  || | ||||||||||||    
T  17855770 ttccagatttgtttctgcttcttgttttgcagattaagctgaaccgatctgaattttactgaagcccaac 17855701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 25969893 - 25969794
Alignment:
Q  143 tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatataagtgagacttcaagacc 242  Q
    |||||||||  ||||||||| ||||||||  ||| ||||||||||||  || |||||  ||| ||||||||||||   |||||||  |||||||||||||    
T  25969893 tgttttgcagcttagctgaaccgatctgcaatgtgctgaagcccaac-gaattatttagcccaagctgcttcagt---atataaggaagacttcaagacc 25969798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 25974333 - 25974234
Alignment:
Q  143 tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatataagtgagacttcaagacc 242  Q
    |||||||||  ||||||||| ||||||||  ||| ||||||||||||  || |||||  ||| ||||||||||||   |||||||  |||||||||||||    
T  25974333 tgttttgcagcttagctgaaccgatctgcaatgtgctgaagcccaac-gaattatttagcccaagctgcttcagt---atataaggaagacttcaagacc 25974238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 9e-45; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 31 - 257
Target Start/End: Original strand, 15699832 - 15700052
Alignment:
Q  31 tggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatatt 130  Q
    ||||||||||||||||| || || || |||||||||| |||||   ||| |||||||| ||||| ||||   ||||| ||||||||||||||| ||||||    
T  15699832 tggaatattcctaaagttgtgttcatattttaggaaatatttgaagttgttttggacgctcctaaagat---gttcctacattttaggactttccatatt 15699928  T
Q  131 tgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatataagtg 229  Q
    ||||||| ||||| |||||||| || ||||| | ||||||| |||||||||||||||||| | |||||||||||||||||||||||||   ||||||| |    
T  15699929 tgtctctgattcttgttttgcagatcagctgga-cgatctgttttgttctgaagcccaacaagagtatttgacccgagctgcttcagt---atataaggg 15700024  T
Q  230 agacttcaagacctaatgaactattcaa 257  Q
    | ||||||||||||||||||| ||||||    
T  15700025 aaacttcaagacctaatgaaccattcaa 15700052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 15161972 - 15162190
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||| ||||||||||| || |||   ||||| |||| |    |||||||||||||||||    
T  15161972 atcagctgtggaatatttctaaagtagtatttatattttaggaaatatttgttattggttgggagattcctaaagatgac---ccgacattttaggactt 15162068  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||| | | | |||| |||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||  ||| ||||||||||||   |    
T  15162069 tccatatttttttatgattcatgttttgcaaattaactgaacctatctgctttgtgctgaagcccaactaaagtatttagcccaagctgcttcagt---a 15162165  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    |||||| ||||||||||||||||||    
T  15162166 tataagggagacttcaagacctaat 15162190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 10724925 - 10724715
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||| |||||||| ||||||||||||||| ||||||||||       ||||| || ||| ||||||| ||||   |||| |||||||||||||||    
T  10724925 atcagctgttgaatattc-taaagtagtatttatattttaggaaa-------tattggttgggatgatcctaaagat---gttctgacattttaggactt 10724837  T
Q  123 tacatatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||| | | ||||| |||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||  ||| || |||||||||   |    
T  10724836 tccatatttgtttttgattcttgttttgcagattagctgaaccgatctgctttgtgccgaagcccaactaaagtatttagcccaagttgcttcagt---a 10724740  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    |||||| ||||||||||||||||||    
T  10724739 tataagggagacttcaagacctaat 10724715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 10938694 - 10938484
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||| |||||||| ||||||||||||||| ||||||||||       ||||| || ||| ||||||| ||||   |||| |||||||||||||||    
T  10938694 atcagctgttgaatattc-taaagtagtatttatattttaggaaa-------tattggttgggatgatcctaaagat---gttctgacattttaggactt 10938606  T
Q  123 tacatatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||| | | ||||| |||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||  ||| || |||||||||   |    
T  10938605 tccatatttgtttttgattcttgttttgcagattagctgaaccgatctgctttgtgccgaagcccaactaaagtatttagcccaagttgcttcagt---a 10938509  T
Q  222 tataagtgagacttcaagacctaat 246  Q
    |||||| ||||||||||||||||||    
T  10938508 tataagggagacttcaagacctaat 10938484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 189
Target Start/End: Original strand, 18601223 - 18601313
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaac 189  Q
    ||||||||||||||||||||||| ||||||||| | | |||| ||||||||| ||| |||||||||||||||| |||| ||||||||||||    
T  18601223 atgttccgacattttaggactttccatatttgtttatgattcttgttttgcagattaagctgaatcgatctgcattgtgctgaagcccaac 18601313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 25117452 - 25117308
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgc-tttgttctgaagcccaactaaagtat 197  Q
    ||||||||||||||||||||||| || |||||| ||| |||| ||||||||||||| ||||||| |||||||| ||| | ||||||||||||   | |||    
T  25117452 atgttccgacattttaggactttccagatttgtttctgattcttgttttgcaaattaagctgaaccgatctgcatttttactgaagcccaac-gtattat 25117354  T
Q  198 ttgacccgagctgcttcagtataatataagtgagacttcaagacctaat 246  Q
    ||  ||| ||||||||||||   |||||||  |||||||||||||||||    
T  25117353 ttagcccaagctgcttcagt---atataaggaagacttcaagacctaat 25117308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 16384561 - 16384397
Alignment:
Q  23 atcagttgtggaatattcctaaagtagta-tttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||||||||||||||| ||||||| ||| ||||| |||||||||| |||| |||||| || | ||||||||| |    ||||||| |||||||||||||    
T  16384561 atcagttgtggaatatttctaaagt-gtattttatattttaggaaatatttattattgtttggaacgatcctata---aatgttccaacattttaggact 16384466  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaa 188  Q
    |  || |||||| ||| |||| ||||||||| ||| ||||||| |||||||| |  | |||||||||||    
T  16384465 tcccaaatttgtttctgattcttgttttgcagattaagctgaaccgatctgcatcttgctgaagcccaa 16384397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 19183255 - 19183335
Alignment:
Q  109 acattttaggactttacatatttgtctctaattctgttttgcaaattagctgaatcgatctgc-tttgttctgaagcccaac 189  Q
    ||||||||||||||||||||||||||||| |||||| |||| | || ||||| | |||| ||| ||||||||||||||||||    
T  19183255 acattttaggactttacatatttgtctctgattctggtttgtagatcagctgga-cgatttgcatttgttctgaagcccaac 19183335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 33898497 - 33898662
Alignment:
Q  23 atcagttgtggaatattcctaaagtagta-tttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| ||||||||||| ||||||| ||| ||||| |||||||||| |||| |||||| || | ||||||||| |    |||||||||||||||||||||    
T  33898497 atcagctgtggaatatttctaaagt-gtattttatattttaggaaatatttattattgtttggaacgatcctata---aatgttccgacattttaggact 33898592  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaac 189  Q
    || || |||||| | | |||| ||||||||| ||| |||||||  ||||||| || | |||||| |||||    
T  33898593 ttccagatttgtttatgattcttgttttgcagattaagctgaactgatctgcattttactgaagtccaac 33898662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 23399684 - 23399850
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| ||| ||||||| ||||||| |||||| || |||||||||| ||||  ||||| || | ||||||||| | ||   |||| ||||||||||||||    
T  23399684 atcagctgtagaatatttctaaagt-gtattttatattttaggaaatatttaatattgtttggaacgatcctataaat---gttctgacattttaggact 23399779  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaac 189  Q
    || || |||||| ||| |||| ||||||||| ||| ||||||| |||||||| |||||  |||||||||||    
T  23399780 ttccaaatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttagtgaagcccaac 23399850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 246
Target Start/End: Complemental strand, 28019899 - 28019755
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaactaaagtat 197  Q
    ||||||||||||||||||||||| || |||||| ||| |||| ||||||||| ||| |||| || |||||| | |||||  |||||||||||  || |||    
T  28019899 atgttccgacattttaggacttttcagatttgtttctgattcttgttttgcagattaagctaaaccgatctacattgttattgaagcccaac-gaattat 28019801  T
Q  198 ttgacccgagctgcttcagtataatataagtgagacttcaagacctaat 246  Q
    ||  ||| || |||||||||   |||||||  |||||||||||||||||    
T  28019800 ttagcccaagttgcttcagt---atataaggaagacttcaagacctaat 28019755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 8067 - 8286
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttgg-acgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| ||||||||| | |||||||||||||||| |||||||||| ||||||||||| || || ||||||||| ||||   |||||||||||||||||||    
T  8067 atcagctgtggaatacttctaaagtagtatttatattttaggaaatatttgttattggttggggacgatcctaaagat---gttccgacattttaggact 8163  T
Q  122 ttacatatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtata 220  Q
    || ||||||||| | | ||| | ||| |||| |||||||||| ||||||||||||| || ||| |||||||||||||||  ||| ||||||||||||       
T  8164 ttccatatttgtttatgattgttgttatgcagattagctgaaccgatctgctttgtgctaaagtccaactaaagtatttagcccaagctgcttcagt--- 8260  T
Q  221 atataagtgagacttcaagacctaat 246  Q
    ||||||| ||||||||||||||||||    
T  8261 atataagggagacttcaagacctaat 8286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 30 - 210
Target Start/End: Original strand, 16821 - 16998
Alignment:
Q  30 gtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatat 129  Q
    |||||||||| |||||||||  ||||| |||||||||| ||||||||||| || | ||||||||| ||   ||||||||||||||||||||||| |||||    
T  16821 gtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctaaag---atgttccgacattttaggacttttcatat 16917  T
Q  130 ttgtctct-aattctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctg 210  Q
    |||| ||| | |||||||| ||| |||||||||| ||||||||||||| |||||| |||| | |||||||| |||| |||||    
T  16918 ttgtttctgatttctgtttcgcagattagctgaaccgatctgctttgtgctgaagtccaaat-aagtatttaacccaagctg 16998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 221
Target Start/End: Complemental strand, 27076 - 26881
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||||||||||||||||||||||| ||  |||| |||||||||| |||||   ||| |||||||| ||||| ||||   ||||| | ||||||||||||    
T  27076 atcagttgtggaatattcctaaagttgtgattatattttaggaaatatttgaagttgttttggacgttcctaaagat---gttcctatattttaggactt 26980  T
Q  123 tacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataa 221  Q
    | ||||||||||| | |||| ||||||| | || ||||| |  |||||| |||||||||||||||| | | | ||||||||||| |||||||||||||||    
T  26979 tccatatttgtctttgattcctgttttgtagatcagctggaa-gatctgttttgttctgaagcccagcaagaatatttgacccgtgctgcttcagtataa 26881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 16109 - 16276
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactt 122  Q
    ||||| ||| ||||||| |||||||||   |||| |||||| ||| ||||||||||| || | ||||||||| ||||   ||||||||||| | ||| ||    
T  16109 atcagatgttgaatatttctaaagtagatattatattttagaaaatatttgttattggttggaacgatcctaaagat---gttccgacattctgggattt 16205  T
Q  123 tacatatttgtctctaattct-gttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaa 192  Q
    | ||||||||| ||| ||||| |||||||| ||||||||||   ||||||||||| |||||||||||||||    
T  16206 tccatatttgtttctgattcttgttttgcagattagctgaactaatctgctttgtgctgaagcccaactaa 16276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 6502 - 6383
Alignment:
Q  102 tgttccgacattttaggactttacatatttgtctct-aattctgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttg 200  Q
    |||||||||||||||||||||| || |||||| | | ||||| |||||||| |||||||||| ||||||||||||| || |||||||||  ||||||||     
T  6502 tgttccgacattttaggacttttcagatttgtttatgaattcagttttgcagattagctgaaccgatctgctttgtactaaagcccaac-gaagtattta 6404  T
Q  201 acccgagctgcttcagtataa 221  Q
     ||| ||||||||||||||||    
T  6403 gcccaagctgcttcagtataa 6383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 9345 - 9289
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatttattttttaggaaacatttgttattg 79  Q
    ||||| ||||||||||| |||||||||  ||||| |||||||||| |||||||||||    
T  9345 atcagctgtggaatatttctaaagtagattttatattttaggaaatatttgttattg 9289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 24789647 - 24789866
Alignment:
Q  23 atcagttgtggaatattcctaaagtagta-tttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| ||||||||||| ||||||| ||| ||||| |||||||||| ||||  ||||| || | ||||||||| |    |||||||||||||||||||||    
T  24789647 atcagctgtggaatattactaaagt-gtattttatattttaggaaaaatttaatattgtttggaacgatcctata---aatgttccgacattttaggact 24789742  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaactaaagtatttgacccgagctgcttcagta 218  Q
    || || |||||| ||| |||| ||||||||| ||| ||||||||| || ||| ||||| |||||||||||| | | |||||  ||| ||||||||||||     
T  24789743 ttccagatttgtttctgattcttgttttgcagattaagctgaatccatttgcattgttactgaagcccaac-atattatttagcccaagctgcttcagt- 24789840  T
Q  219 taatataagtgagacttcaagacctaat 246  Q
      |||||||| |||||||||||||||||    
T  24789841 --atataagtaagacttcaagacctaat 24789866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 104 - 221
Target Start/End: Complemental strand, 15328918 - 15328801
Alignment:
Q  104 ttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaattagctgaatcgatctgctttgttctgaagcccaactaaagtatttgac 202  Q
    |||| |||||||| || ||| |||||||||| || |||| ||||||||| || ||||| | ||||||| |||||||||||||||||| | | ||||||||    
T  15328918 ttcctacattttaagattttccatatttgtccctgattcctgttttgcagatcagctgga-cgatctgttttgttctgaagcccaacaagaatatttgac 15328820  T
Q  203 ccgagctgcttcagtataa 221  Q
    |||||||||||||||||||    
T  15328819 ccgagctgcttcagtataa 15328801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 12911163 - 12910998
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtat-ttattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| |||| |||||| ||||||| |||| |||| |||||||||| |||| |||||| || | ||||||||| | ||   |||||||||||||||||||    
T  12911163 atcagctgtgaaatatttctaaagt-gtatcttatattttaggaaatatttattattgtttggaacgatcctataaat---gttccgacattttaggact 12911068  T
Q  122 ttacatatttgtctct-aattctgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaac 189  Q
    || || |||||| ||| | || ||||||||| ||| ||||||| |||||||| |||| ||||||||||||    
T  12911067 ttccagatttgtttctgatttttgttttgcagattaagctgaaccgatctgcattgtgctgaagcccaac 12910998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 22611487 - 22611396
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgc-tttgttctgaagcccaac 189  Q
    ||||||||||||||||||||||| || |||||| | | |||| ||||||||| ||| ||||||| |||||||| ||| | ||||||||||||    
T  22611487 atgttccgacattttaggactttccaaatttgtttatgattcttgttttgcagattaagctgaaccgatctgcatttttactgaagcccaac 22611396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 1856 - 2074
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| |||||||||||  |||||| |||||| || |||| ||||| |||| |||||| || | ||||||||| | ||   |||||||||||||||||||    
T  1856 atcagctgtggaatatttataaagt-gtattttatatttttggaaatatttattattgtttggaacgatcctataaat---gttccgacattttaggact 1951  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtat 219  Q
    ||  | |||||| ||| |||| ||||||||| ||| ||||||| |||| |||||||| |||||||||||| ||| |||||  ||| | ||||||||||      
T  1952 ttctagatttgtttctgattcttgttttgcagattaagctgaaccgatatgctttgtgctgaagcccaac-aaattatttagcccaaactgcttcagt-- 2048  T
Q  220 aatataagtgagacttcaagacctaat 246  Q
     |||||||  |||||||||||||||||    
T  2049 -atataaggaagacttcaagacctaat 2074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 25166 - 25384
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| ||| ||||||| ||||||| |||||| || |||||||||| ||||  ||||| || | ||||||||| | ||   |||||||||||||||||||    
T  25166 atcagctgttgaatatttctaaagt-gtattttatattttaggaaatatttaatattgtttggaacgatcctataaat---gttccgacattttaggact 25261  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtat 219  Q
    || || |||||| ||| |||| ||||||||| ||| ||||||| |||||||| || | ||||||||||||  || |||||  ||| ||||||||||||      
T  25262 ttccagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcattttactgaagcccaac-gaattatttagcccaagctgcttcagt-- 25358  T
Q  220 aatataagtgagacttcaagacctaat 246  Q
     |||||||  |||||||||||||||||    
T  25359 -atataaggaagacttcaagacctaat 25384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 2561 - 2464
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtatt-tattttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    ||||| ||||||||||| ||||||| ||||| ||| |||||||||| |||| |||||| || | ||||||||| ||||   |||||||||||||||||||    
T  2561 atcagctgtggaatatttctaaagt-gtattatatattttaggaaatatttattattgtttggaacgatcctatagat---gttccgacattttaggact 2466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 189
Target Start/End: Complemental strand, 37227 - 37097
Alignment:
Q  57 tttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt 155  Q
    ||||||||||| |||| |||||| || | ||||||||| |    ||||||||||||||||||||| | || |||||| | | |||| ||||||||| | |    
T  37227 tttttaggaaatatttattattgtttggaacgatcctata---aatgttccgacattttaggactgtccagatttgtttatgattcttgttttgcagact 37131  T
Q  156 agctgaatcgatctgctttgttctgaagcccaac 189  Q
    ||||||| |||| |||||||| |||| |||||||    
T  37130 agctgaaccgatttgctttgtgctgaggcccaac 37097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 109747 - 109966
Alignment:
Q  23 atcagttgtggaatattcctaaagtagtattt-attttttaggaaacatttgttattgatttggacgatcctagagatcatgttccgacattttaggact 121  Q
    |||| |||||||||||| ||||||| |||||| || |||||||||| ||||  | ||| || | ||||||||| | ||   ||||  |||||||||||||    
T  109747 atcaattgtggaatatttctaaagt-gtattttatattttaggaaatatttaattttgtttggaacgatcctataaat---gttctaacattttaggact 109842  T
Q  122 ttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaactaaagtatttgacccgagctgcttcagta 218  Q
    || || |||||| ||| |||| ||||||||| ||| ||||||| | || ||| ||||| ||||||||||||  || |||||  ||| ||||||||||||     
T  109843 ttccagatttgtttctgattcttgttttgcagattaagctgaaccaatatgcattgttactgaagcccaac-gaattatttagcccaagctgcttcagt- 109940  T
Q  219 taatataagtgagacttcaagacctaat 246  Q
      |||||||  |||||||||||||||||    
T  109941 --atataaggaagacttcaagacctaat 109966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 220
Target Start/End: Original strand, 356858 - 356979
Alignment:
Q  101 atgttccgacattttaggactttacatatttgtctctaattc-tgttttgcaaatt-agctgaatcgatctgctttgtt-ctgaagcccaactaaagtat 197  Q
    ||||||||||||||||||| ||| || |||||| ||| |||| ||||||| | ||| ||||||| |||||||| ||||| |||||||||| | ||| |||    
T  356858 atgttccgacattttaggattttccagatttgtttctgattcttgttttgaagattaagctgaaccgatctgcattgttactgaagcccatc-aaattat 356956  T
Q  198 ttgacccgagctgcttcagtata 220  Q
    ||  ||| |||||||| ||||||    
T  356957 ttagcccaagctgctttagtata 356979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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