View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7800_low_3 (Length: 592)

Name: NF7800_low_3
Description: NF7800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7800_low_3
NF7800_low_3
[»] chr1 (35 HSPs)
chr1 (141-582)||(1814731-1815174)
chr1 (1-108)||(1815190-1815297)
chr1 (416-528)||(1830412-1830524)
chr1 (1-55)||(13997869-13997923)
chr1 (1-55)||(22881635-22881689)
chr1 (1-55)||(47989484-47989537)
chr1 (1-58)||(398784-398841)
chr1 (5-73)||(1705015-1705083)
chr1 (8-80)||(32461489-32461561)
chr1 (1-57)||(37598816-37598871)
chr1 (3-58)||(16812526-16812581)
chr1 (1-51)||(113289-113339)
chr1 (1-55)||(24577205-24577259)
chr1 (1-58)||(1486728-1486785)
chr1 (1-58)||(2896140-2896197)
chr1 (8-57)||(9103624-9103673)
chr1 (1-73)||(31672914-31672987)
chr1 (1-58)||(42359468-42359525)
chr1 (1-58)||(46348402-46348459)
chr1 (1-56)||(28273107-28273162)
chr1 (8-58)||(18556482-18556532)
chr1 (74-104)||(19326909-19326939)
chr1 (1-55)||(36878447-36878501)
chr1 (1-43)||(40258952-40258994)
chr1 (1-58)||(6612190-6612247)
chr1 (1-54)||(10572608-10572661)
chr1 (1-58)||(10577754-10577811)
chr1 (1-58)||(12443479-12443536)
chr1 (1-54)||(21366039-21366092)
chr1 (1-58)||(22515906-22515963)
chr1 (1-58)||(34298419-34298476)
chr1 (1-54)||(38078680-38078733)
chr1 (1-58)||(48450606-48450663)
chr1 (369-409)||(1830520-1830560)
chr1 (1-49)||(9828036-9828084)
[»] chr5 (23 HSPs)
chr5 (1-73)||(39698509-39698581)
chr5 (1-58)||(21522733-21522790)
chr5 (1-58)||(21533299-21533356)
chr5 (1-60)||(6247603-6247662)
chr5 (1-58)||(13287418-13287475)
chr5 (1-58)||(14674252-14674309)
chr5 (1-58)||(19552562-19552619)
chr5 (1-58)||(21191075-21191132)
chr5 (1-52)||(33178014-33178065)
chr5 (1-55)||(31084309-31084363)
chr5 (1-55)||(41995457-41995511)
chr5 (1-58)||(6770526-6770583)
chr5 (1-58)||(9449452-9449509)
chr5 (1-54)||(24906320-24906373)
chr5 (1-73)||(42893328-42893400)
chr5 (1-56)||(21351924-21351979)
chr5 (9-71)||(10298539-10298601)
chr5 (8-60)||(6072339-6072392)
chr5 (1-58)||(6401481-6401538)
chr5 (1-54)||(21576764-21576817)
chr5 (1-58)||(22013397-22013454)
chr5 (1-58)||(4105240-4105299)
chr5 (2-58)||(40000555-40000611)
[»] chr3 (32 HSPs)
chr3 (1-73)||(18426917-18426989)
chr3 (1-54)||(10954939-10954992)
chr3 (1-49)||(14209105-14209153)
chr3 (1-55)||(16000035-16000089)
chr3 (1-54)||(4987310-4987363)
chr3 (1-58)||(14216875-14216932)
chr3 (1-58)||(14223004-14223061)
chr3 (1-58)||(55401058-55401115)
chr3 (1-73)||(25948906-25948978)
chr3 (1-49)||(34910309-34910357)
chr3 (1-56)||(10268505-10268560)
chr3 (1-76)||(27505211-27505286)
chr3 (1-55)||(20503451-20503505)
chr3 (1-55)||(21479104-21479158)
chr3 (1-71)||(29112299-29112369)
chr3 (1-58)||(8587040-8587097)
chr3 (1-58)||(10335305-10335362)
chr3 (1-58)||(15796313-15796370)
chr3 (1-58)||(28812499-28812555)
chr3 (1-58)||(28917984-28918041)
chr3 (6-55)||(40052318-40052367)
chr3 (1-57)||(2620072-2620128)
chr3 (1-56)||(14979166-14979221)
chr3 (2-73)||(23870579-23870650)
chr3 (1-52)||(26508099-26508150)
chr3 (8-55)||(39756222-39756269)
chr3 (1-58)||(3164044-3164101)
chr3 (1-58)||(21720747-21720804)
chr3 (1-58)||(24205060-24205117)
chr3 (1-58)||(26492224-26492281)
chr3 (1-56)||(25775493-25775549)
chr3 (1-33)||(38731226-38731258)
[»] chr8 (22 HSPs)
chr8 (1-60)||(15816148-15816207)
chr8 (1-58)||(36450773-36450830)
chr8 (1-58)||(20873052-20873109)
chr8 (3-60)||(41838144-41838201)
chr8 (6-58)||(22651959-22652011)
chr8 (1-57)||(30271310-30271366)
chr8 (1-55)||(4673444-4673498)
chr8 (1-55)||(4786357-4786411)
chr8 (6-56)||(13436988-13437038)
chr8 (4-58)||(29510326-29510380)
chr8 (1-58)||(18170501-18170558)
chr8 (1-58)||(18634069-18634126)
chr8 (1-54)||(22595981-22596034)
chr8 (1-74)||(34897052-34897125)
chr8 (4-60)||(25192369-25192425)
chr8 (7-58)||(3677769-3677820)
chr8 (13-60)||(24196628-24196675)
chr8 (74-104)||(19177456-19177486)
chr8 (74-104)||(44206254-44206284)
chr8 (19-60)||(22204620-22204661)
chr8 (1-54)||(41831959-41832012)
chr8 (1-53)||(31556985-31557036)
[»] chr2 (27 HSPs)
chr2 (1-56)||(20242746-20242801)
chr2 (1-58)||(18421946-18422003)
chr2 (3-58)||(24894372-24894427)
chr2 (1-58)||(15972856-15972913)
chr2 (1-58)||(30404869-30404926)
chr2 (1-58)||(34785001-34785058)
chr2 (1-58)||(19536416-19536474)
chr2 (1-58)||(6940238-6940295)
chr2 (1-58)||(12940954-12941011)
chr2 (1-58)||(15657847-15657904)
chr2 (1-58)||(16069273-16069330)
chr2 (1-58)||(21374718-21374775)
chr2 (1-58)||(37558960-37559017)
chr2 (1-65)||(12668442-12668506)
chr2 (1-60)||(29367388-29367448)
chr2 (1-56)||(18841032-18841087)
chr2 (1-55)||(20473308-20473362)
chr2 (1-79)||(24009259-24009336)
chr2 (1-55)||(36756363-36756417)
chr2 (1-55)||(38117178-38117232)
chr2 (1-62)||(19573958-19574018)
chr2 (1-58)||(20539693-20539750)
chr2 (1-58)||(21616745-21616802)
chr2 (1-54)||(21782837-21782890)
chr2 (1-58)||(30335400-30335457)
chr2 (1-58)||(30717549-30717606)
chr2 (1-50)||(33153415-33153464)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-58)||(51794-51851)
[»] chr6 (27 HSPs)
chr6 (1-58)||(8776992-8777049)
chr6 (1-58)||(34595117-34595174)
chr6 (1-56)||(10770693-10770748)
chr6 (1-56)||(16766682-16766737)
chr6 (1-55)||(16833294-16833348)
chr6 (1-58)||(8365538-8365595)
chr6 (1-58)||(12696307-12696364)
chr6 (1-58)||(17841608-17841665)
chr6 (3-58)||(7930288-7930343)
chr6 (8-58)||(426540-426590)
chr6 (1-55)||(5626715-5626769)
chr6 (1-54)||(1681745-1681798)
chr6 (5-54)||(7801179-7801228)
chr6 (1-58)||(9107389-9107446)
chr6 (1-58)||(9658862-9658919)
chr6 (3-51)||(853880-853928)
chr6 (1-73)||(7265612-7265684)
chr6 (1-56)||(7938101-7938156)
chr6 (1-52)||(7977849-7977900)
chr6 (6-53)||(24115871-24115918)
chr6 (1-55)||(5970127-5970181)
chr6 (2-56)||(19044449-19044503)
chr6 (1-58)||(3398602-3398658)
chr6 (1-58)||(17341683-17341740)
chr6 (1-58)||(17435182-17435239)
chr6 (1-58)||(28152082-28152138)
chr6 (1-54)||(31959146-31959199)
[»] scaffold0361 (1 HSPs)
scaffold0361 (1-72)||(14498-14570)
[»] scaffold0306 (1 HSPs)
scaffold0306 (3-58)||(13383-13438)
[»] scaffold0152 (1 HSPs)
scaffold0152 (3-58)||(21889-21944)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-58)||(178837-178895)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-58)||(20155-20212)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-58)||(46665-46722)
[»] chr4 (21 HSPs)
chr4 (3-60)||(11651155-11651212)
chr4 (1-56)||(27706196-27706251)
chr4 (1-71)||(4383338-4383407)
chr4 (8-50)||(12895300-12895342)
chr4 (1-55)||(19482654-19482708)
chr4 (4-58)||(23293008-23293062)
chr4 (1-58)||(35158004-35158061)
chr4 (1-57)||(36635308-36635364)
chr4 (1-75)||(22234909-22234984)
chr4 (1-55)||(21945489-21945543)
chr4 (1-58)||(30298929-30298987)
chr4 (1-58)||(30327797-30327855)
chr4 (1-55)||(40481623-40481676)
chr4 (1-58)||(5414191-5414248)
chr4 (1-58)||(12797357-12797413)
chr4 (1-54)||(20743297-20743350)
chr4 (1-58)||(40179655-40179712)
chr4 (1-57)||(49431009-49431066)
chr4 (1-46)||(54580042-54580087)
chr4 (2-58)||(7012049-7012105)
chr4 (6-58)||(20521873-20521925)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-73)||(92775-92847)
[»] chr7 (23 HSPs)
chr7 (1-72)||(23191865-23191936)
chr7 (1-56)||(24339627-24339682)
chr7 (1-56)||(25481887-25481942)
chr7 (1-55)||(9408353-9408407)
chr7 (1-76)||(32308079-32308160)
chr7 (1-58)||(13770674-13770731)
chr7 (1-58)||(27945024-27945081)
chr7 (1-54)||(35861951-35862004)
chr7 (1-43)||(1656674-1656716)
chr7 (1-55)||(8234132-8234186)
chr7 (8-58)||(11061102-11061152)
chr7 (4-50)||(11665462-11665508)
chr7 (1-55)||(15902808-15902862)
chr7 (1-58)||(18213052-18213110)
chr7 (1-55)||(22868028-22868082)
chr7 (3-56)||(5409857-5409910)
chr7 (1-54)||(7438693-7438746)
chr7 (1-58)||(18215205-18215262)
chr7 (1-58)||(24105661-24105718)
chr7 (1-54)||(41020483-41020536)
chr7 (1-58)||(43027488-43027545)
chr7 (1-58)||(43249976-43250033)
chr7 (1-53)||(22602729-22602781)
[»] scaffold0450 (1 HSPs)
scaffold0450 (7-69)||(8660-8722)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-55)||(23406-23460)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-58)||(241577-241634)
[»] scaffold0246 (1 HSPs)
scaffold0246 (1-55)||(19562-19615)
[»] scaffold0652 (1 HSPs)
scaffold0652 (1-58)||(481-538)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-73)||(7330-7403)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-58)||(8781-8838)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-58)||(130465-130522)
[»] scaffold0007 (1 HSPs)
scaffold0007 (9-58)||(225295-225344)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-49)||(8002-8050)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-49)||(33382-33430)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-57)||(17768-17824)


Alignment Details
Target: chr1 (Bit Score: 377; Significance: 0; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 141 - 582
Target Start/End: Complemental strand, 1815174 - 1814731
Alignment:
Q  141 aaaccctcacccacatatagctgccgccacgcccctcccttgcactgccaccacagccgctgtgttttctgcaaaaacgttgtttccgcgccctcctctt 240  Q
    ||||||||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1815174 aaaccctcacccacatatagcagccgccacacccctcccttgcgccgccaccacagccgctgtgttttctgcaaaaacgttgtttccgcgccctcctctt 1815075  T
Q  241 tgcgcccctccattgccgttgtgcccttcaaacacgcttccgcgtccaaacagccgcgaactgacttccatgcgaccttcccttcgcgcagtcatctgat 340  Q
    ||| || |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  1815074 tgctccgctccattgccattgtgcccttcaaacacgcttccacgtccaaacagccgcgaaccgacttccatgcgaccttcccttcgtgcagtcatctgat 1814975  T
Q  341 cagccactcaccgtctcctttgttcctgcactgatctagttgaagacatgacccacacaaacagaggccgcctaaaggcctaactacctagctataagat 440  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  1814974 cagccattcaccgtctcctttgttcctgcactgatctagttgaagacatgaccgacgcaaacagaggccgcctaaaggcctaactacctagctataagat 1814875  T
Q  441 tatgaatatcatagaatcaacgcataatgcaacagttctatatattctatttgaatactctcatcggtctattgatgaaccaaatatagtttagtctatc 540  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1814874 tatgaatatcatagaatcaacacataatgcaacagttctatatattctatttgaatactctcatcggtctattgatgaaccaaatatagtttagtctatc 1814775  T
Q  541 ataaatggaccaaaattattatattagt--agttatatattctt 582  Q
    ||||||||||||||||||||||||||||  ||||||||||||||    
T  1814774 ataaatggaccaaaattattatattagtacagttatatattctt 1814731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1815297 - 1815190
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggttgtatcataattagatagttgacct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  1815297 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatccgtgcttcataggttgtatcatgattagatagttgacct 1815198  T
Q  101 acacgtgt 108  Q
    ||| ||||    
T  1815197 acatgtgt 1815190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 416 - 528
Target Start/End: Complemental strand, 1830524 - 1830412
Alignment:
Q  416 aggcctaactacctagctataagattatgaatatcatagaatcaacgcataatgcaacagttctatatattctatttgaatactctcatcggtctattga 515  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||| | | |||||||||| ||||||||||| ||| |||| |    
T  1830524 aggcctaactacctagccataagattatgcgtatcatagaatcaacacataatgcaacagttatgtgtattctatttaaatactctcattggtatattaa 1830425  T
Q  516 tgaaccaaatata 528  Q
    |||||| ||||||    
T  1830424 tgaacctaatata 1830412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13997923 - 13997869
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||||||||||| |||||||||   |||||||||||||||||||    
T  13997923 tacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtc 13997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22881635 - 22881689
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    |||||| |||||||||||||||| |||| |||| |||||||||||||||||||||    
T  22881635 tacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 47989537 - 47989484
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||||||||||    
T  47989537 tacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtc 47989484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 398784 - 398841
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| ||||   ||||||||||||||||||||||    
T  398784 tacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgt 398841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 1705015 - 1705083
Alignment:
Q  5 ctgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 73  Q
    ||||||||||||||||||| |||| ||||  |||||||| ||||| ||||||||||  |||||||||||    
T  1705015 ctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgtatccgtgcttcatag 1705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 32461489 - 32461561
Alignment:
Q  8 aattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggttgtat 80  Q
    |||||||||||||||| |||| |||| ||||| |||||||||| |||| ||||  ||||||| ||||||||||    
T  32461489 aattatgtgattttttcaaattattagttgtgccggcgtgtcactgtctgtatccgtgcttcctaggttgtat 32461561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37598871 - 37598816
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 57  Q
    ||||||||||| ||||||||||| |||| |||| |||||||||||||||||||||||    
T  37598871 tacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 16812581 - 16812526
Alignment:
Q  3 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||| | |||| |||||| ||||||| ||||||||||||||    
T  16812581 cactgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgt 16812526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 113339 - 113289
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcag 51  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||||||||||    
T  113339 tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24577205 - 24577259
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||||||||||| |||| |||| ||||||| ||||||| |||||    
T  24577205 tacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1486728 - 1486785
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| ||||  |||||| |||||||||| |||||    
T  1486728 tacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgt 1486785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2896140 - 2896197
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||| | |||| ||||   ||||||||||||||||||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 2896197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 9103673 - 9103624
Alignment:
Q  8 aattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 57  Q
    |||||||||||||||| |||| ||||  ||||||||||||||||||||||    
T  9103673 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccg 9103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 31672914 - 31672987
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt-ccgtatttgtgcttcatag 73  Q
    |||||||||||| |||||||||| |||| ||||  |||||||| |||||||||| ||||||  |||||||||||    
T  31672914 tacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcccgtatccgtgcttcatag 31672987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42359468 - 42359525
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||| ||||||||||| |||| ||||  |||||| ||||||||||||||||    
T  42359468 tacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgt 42359525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46348402 - 46348459
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||| ||||||||| |||| ||||  |||||||||||||||||||||||    
T  46348402 tacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 46348459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28273107 - 28273162
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    ||||||||||||| ||||||||| |||| |||| ||||||| || |||||||||||    
T  28273107 tacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtcc 28273162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 18556482 - 18556532
Alignment:
Q  8 aattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||| |||| |||| ||||  |||||||||||||||||||||||    
T  18556482 aattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgt 18556532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 104
Target Start/End: Original strand, 19326909 - 19326939
Alignment:
Q  74 gttgtatcataattagatagttgacctacac 104  Q
    |||||||||||||||||||||||||||||||    
T  19326909 gttgtatcataattagatagttgacctacac 19326939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 36878501 - 36878447
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||||||||| | |||| ||||   |||||||||||||||||||    
T  36878501 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40258952 - 40258994
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcgg 43  Q
    ||||||||||||||||||||||| |||| |||| |||||||||    
T  40258952 tacactgaattatgtgattttttcaaattattaattgtgtcgg 40258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6612190 - 6612247
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||| ||||||| |||| ||||  ||| ||||||||||| |||||||    
T  6612190 tacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgt 6612247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10572608 - 10572661
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||| ||||||||||||||| | |||| |||| | ||||||||||||||||||    
T  10572608 tacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgt 10572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10577754 - 10577811
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||| ||| ||||||||| ||||| |||||  |||||||||||||| ||||||||    
T  10577754 tacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgt 10577811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12443479 - 12443536
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||| | |||| ||||  |||||||||||||| || |||||    
T  12443479 tacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgt 12443536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21366039 - 21366092
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||||||||||||| |||||||||||| ||||  |||| ||||||||| ||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgt 21366092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22515906 - 22515963
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||||||||||| |||| ||||  |||||| ||||||| ||||||||    
T  22515906 tacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgt 22515963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34298476 - 34298419
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||| | |||| |||| | ||||||| |||||||| |||||    
T  34298476 tacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgt 34298419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38078680 - 38078733
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    |||| |||||||||||||||||| |||| ||||  ||||||| |||||||||||    
T  38078680 tacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt 38078733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48450606 - 48450663
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||| ||||||| |||| ||||  ||||| |||||||||||||||||    
T  48450606 tacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgt 48450663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 409
Target Start/End: Complemental strand, 1830560 - 1830520
Alignment:
Q  369 cactgatctagttgaagacatgacccacacaaacagaggcc 409  Q
    |||||||||||||||||||| ||||||  ||||||||||||    
T  1830560 cactgatctagttgaagacacgacccatgcaaacagaggcc 1830520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9828084 - 9828036
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 49  Q
    ||||||||||||||||||||| | |||| |||| | |||||||||||||    
T  9828084 tacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 39698581 - 39698509
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 73  Q
    ||||||||||||||||||||||| |||| ||||  |||||| ||||||||||||||||||  |||||||||||    
T  39698581 tacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgtatccgtgcttcatag 39698509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21522790 - 21522733
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||    
T  21522790 tacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgt 21522733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21533356 - 21533299
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||    
T  21533356 tacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgt 21533299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6247662 - 6247603
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 60  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||||||||||||| |||||    
T  6247662 tacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtat 6247603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 13287418 - 13287475
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| ||||| ||||||| ||||| |||||||||    
T  13287418 tacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgt 13287475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14674309 - 14674252
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  14674309 tacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 14674252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19552562 - 19552619
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgt 19552619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21191075 - 21191132
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||| |||||||||||||    
T  21191075 tacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgt 21191132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33178065 - 33178014
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 52  Q
    |||||| |||||||||||||||| |||| |||| ||||||||||||||||||    
T  33178065 tacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31084363 - 31084309
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    |||| |||||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  31084363 tacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41995511 - 41995457
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    |||| ||||||||||||||||||  ||| |||| |||||||||||||||||||||    
T  41995511 tacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtc 41995457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6770583 - 6770526
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||| | |||| |||| ||||||| | ||||||||||||||    
T  6770583 tacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgt 6770526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9449509 - 9449452
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||| |||||||||||||||| | |||| |||||| ||||||||||| ||||||||||    
T  9449509 tacattgaattatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgt 9449452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24906320 - 24906373
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||||||||||||| ||||||| |||| ||||| ||||| |||||||||||||    
T  24906320 tacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgt 24906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42893400 - 42893328
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 73  Q
    ||||||| ||||||||||||||| |||| ||||  |||||||| ||||| |||||| |||  |||||||||||    
T  42893400 tacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtccatatccgtgcttcatag 42893328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21351924 - 21351979
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    ||||||||||||||||| |||||  ||| |||| ||||||||| ||||||||||||    
T  21351924 tacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 10298601 - 10298539
Alignment:
Q  9 attatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcat 71  Q
    ||||||||| ||||| |||| |||| |||||||||||||| |||||||| ||  |||||||||    
T  10298601 attatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccgcatccgtgcttcat 10298539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 6072339 - 6072392
Alignment:
Q  8 aattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 60  Q
    |||||||||||| ||||||||| |||| || ||||||||||||||| |||||||    
T  6072339 aattatgtgattgttttaaaattattagttatgtcggcgtgtcagtatccgtat 6072392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6401538 - 6401481
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||| ||| ||||||||| ||||| | ||| ||||||||||||||| ||||||||    
T  6401538 tacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgt 6401481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21576764 - 21576817
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||||||||||||||||||||| |||| ||||  ||||| ||||| |||||||    
T  21576764 tacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgt 21576817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 22013454 - 22013397
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||| ||||||  |||| ||||  |||||||||||||||||||||||    
T  22013454 tacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgt 22013397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 4105299 - 4105240
Alignment:
Q  1 tacactgaattatgtgat--tttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||  ||||| |||| |||| || ||||||||||||||| |||||    
T  4105299 tacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgt 4105240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 40000555 - 40000611
Alignment:
Q  2 acactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||||||||||| |||| ||||   |||||| | |||||||||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgt 40000611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18426989 - 18426917
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 73  Q
    ||||| ||||||||||||||||| |||| |||| | ||||||||||||| |||||||||| ||||||||||||    
T  18426989 tacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtccgtatctgtgcttcatag 18426917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10954992 - 10954939
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  10954992 tacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14209153 - 14209105
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 49  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  14209153 tacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16000035 - 16000089
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||    
T  16000035 tacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtc 16000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4987310 - 4987363
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||||||||||||||||||||| |||| ||||  |||||||||||||||||||    
T  4987310 tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14216932 - 14216875
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||| |||| ||||||||| |||| |||||||| |||||||||||||||    
T  14216932 tacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgt 14216875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14223061 - 14223004
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||| |||| ||||||||| |||| |||||||| |||||||||||||||    
T  14223061 tacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgt 14223004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 55401115 - 55401058
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||||||||||| |||| |||| |||||||||||| |||||||||||    
T  55401115 tacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgt 55401058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25948906 - 25948978
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 73  Q
    ||||||||||||||||||||||| |||| ||||   || ||||| ||||||||||||| | ||||||||||||    
T  25948906 tacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtctgtgcttcatag 25948978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34910357 - 34910309
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 49  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||||    
T  34910357 tacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10268505 - 10268560
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    |||||| |||||||||||||||| |||| ||||  |||||||||||||||||||||    
T  10268505 tacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtcc 10268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27505286 - 27505211
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggtt 76  Q
    |||||| ||||||||||||||| ||||| ||||  ||||||||| |||| || |||||||  ||||||||||||||    
T  27505286 tacacttaattatgtgatttttaaaaattattagctgtgtcggcttgtccgtatccgtatccgtgcttcataggtt 27505211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20503505 - 20503451
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||| ||||||| |||| |||  |||||||||||||||||||||    
T  20503505 tacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21479158 - 21479104
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||| ||||||||||| |||| ||||  ||||||||||||||||||||    
T  21479158 tacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29112299 - 29112369
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcat 71  Q
    ||||||||||||| ||||||| | ||||||||| | |||||  |||||||||||||||||  |||||||||    
T  29112299 tacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtgtccgtatccgtgcttcat 29112369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8587040 - 8587097
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||||||||||| |||| | ||  |||||||||||||||||||||||    
T  8587040 tacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgt 8587097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 10335305 - 10335362
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| || ||||||| ||||| |||| |||| ||||||||||||||||||||||||    
T  10335305 tacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgt 10335362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15796313 - 15796370
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||| ||||||||| |||| ||||  ||||||||||||||| |||||||    
T  15796313 tacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgt 15796370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28812555 - 28812499
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||||||||| || |||| |||| ||||||||||||||| ||||||||    
T  28812555 tacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc-gtgtccgt 28812499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28918041 - 28917984
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| ||||  | ||||||||||||||| |||||    
T  28918041 tacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgt 28917984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 40052367 - 40052318
Alignment:
Q  6 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    |||||||||||||||||| |||| ||||  ||||||||||||||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2620072 - 2620128
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 57  Q
    |||||| |||||||||||||| | |||| |||| | |||||||||||||||||||||    
T  2620072 tacacttaattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccg 2620128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14979221 - 14979166
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    ||||||||||||||||||||||| |||| ||||  |||||||||||| || |||||    
T  14979221 tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtcc 14979166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 23870579 - 23870650
Alignment:
Q  2 acactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 73  Q
    |||||||||||| ||||||||| |||| ||||   |||||| |||||| ||||||||||  |||||||||||    
T  23870579 acactgaattatatgattttttcaaattattagcggtgtcgacgtgtccgtgtccgtatccgtgcttcatag 23870650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26508150 - 26508099
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 52  Q
    ||||||||||||||||||||||| |||| ||||  |||||| ||||||||||    
T  26508150 tacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagt 26508099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 39756269 - 39756222
Alignment:
Q  8 aattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    |||||||||||||||| |||| |||| || ||||||||||||||||||    
T  39756269 aattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtc 39756222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3164044 - 3164101
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| ||||  ||||||| |||| || |||||||    
T  3164044 tacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgt 3164101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21720804 - 21720747
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||| ||| || | |||| |||||  ||||||||||||||||||||||    
T  21720804 tacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgt 21720747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 24205060 - 24205117
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||| ||||||| ||||| | |||| |||||  ||||||||||||||||||||||    
T  24205060 tacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgt 24205117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26492224 - 26492281
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||| | ||||||||| |||| ||||  | |||||||||||||||||||||    
T  26492224 tacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgt 26492281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25775549 - 25775493
Alignment:
Q  1 tacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    ||||||||||||||||||| |||| |||| ||||  ||||| |||||||||||||||    
T  25775549 tacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtcc 25775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38731258 - 38731226
Alignment:
Q  1 tacactgaattatgtgattttttaaaataatta 33  Q
    |||||||||||||||||||||||||||| ||||    
T  38731258 tacactgaattatgtgattttttaaaattatta 38731226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 9e-16; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15816148 - 15816207
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 60  Q
    |||||| |||||||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  15816148 tacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtat 15816207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36450773 - 36450830
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||    
T  36450773 tacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 36450830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20873109 - 20873052
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||||||||||| |||| ||||| | |||||||||||||||||||||    
T  20873109 tacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgt 20873052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 41838144 - 41838201
Alignment:
Q  3 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 60  Q
    ||||||||||||||||||||| |||| ||||  ||||||| |||||||||||||||||    
T  41838144 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtat 41838201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 22652011 - 22651959
Alignment:
Q  6 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  22652011 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 22651959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30271310 - 30271366
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 57  Q
    ||||||| ||||||||||||||| |||| ||||  ||||||||||||||||||||||    
T  30271310 tacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4673444 - 4673498
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||| | ||||||||| |||| ||||| ||||||||||||||||||||    
T  4673444 tacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtc 4673498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4786357 - 4786411
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||||||||| | |||| |||| | |||||||||||||||||||    
T  4786357 tacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 13436988 - 13437038
Alignment:
Q  6 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    |||||||||||||||||| |||| ||||  |||||||||||||||||||||    
T  13436988 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 13437038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 29510326 - 29510380
Alignment:
Q  4 actgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||| ||||||||||| |||| ||||  |||||||||||||||||||||||    
T  29510326 actgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 29510380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18170501 - 18170558
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||| |||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||    
T  18170501 tacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgt 18170558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18634069 - 18634126
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||| |||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||    
T  18634069 tacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgt 18634126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22596034 - 22595981
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||||||||||||| ||||||| |||| ||||  |||||||||||||||||||    
T  22596034 tacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34897125 - 34897052
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatagg 74  Q
    ||||||||||||||||||||| | |||| ||||   |||||| |||||| |||||||| | |||||||||||||    
T  34897125 tacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgtttatgtgcttcatagg 34897052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 25192369 - 25192425
Alignment:
Q  4 actgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 60  Q
    |||||||||||| | ||||| |||| ||||  |||||||||||||||||||||||||    
T  25192369 actgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtat 25192425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 3677820 - 3677769
Alignment:
Q  7 gaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||||||||||| |||| ||||||||  |||||||| |||||    
T  3677820 gaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgt 3677769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 24196628 - 24196675
Alignment:
Q  13 tgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 60  Q
    ||||||||||| |||| |||| ||||||||||||||| ||||||||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcggtgtccgtat 24196675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 104
Target Start/End: Original strand, 19177456 - 19177486
Alignment:
Q  74 gttgtatcataattagatagttgacctacac 104  Q
    |||||||||||||||||||||||||||||||    
T  19177456 gttgtatcataattagatagttgacctacac 19177486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 104
Target Start/End: Complemental strand, 44206284 - 44206254
Alignment:
Q  74 gttgtatcataattagatagttgacctacac 104  Q
    |||||||||||||||||||||||||||||||    
T  44206284 gttgtatcataattagatagttgacctacac 44206254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 22204661 - 22204620
Alignment:
Q  19 tttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 60  Q
    ||||| |||| |||| ||||||||||||||||||||||||||    
T  22204661 ttttttaaattattagttgtgtcggcgtgtcagtgtccgtat 22204620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41831959 - 41832012
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||| |||| ||||    
T  41831959 tacactgaattatgtgattttttcaaattattaactgtgtcggcatgtctgtgt 41832012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31557036 - 31556985
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 53  Q
    |||||||||||||||||| |||| |||| ||||  ||||||||||||||||||    
T  31557036 tacactgaattatgtgat-ttttcaaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 9e-16; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20242746 - 20242801
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  20242746 tacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtcc 20242801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18422003 - 18421946
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||||||| |||| |||| |||| ||||||||||||||||||||||||    
T  18422003 tacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgt 18421946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 24894427 - 24894372
Alignment:
Q  3 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  24894427 cactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgt 24894372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15972913 - 15972856
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||| ||| ||||||| |||| |||| ||||||||||||||||||||||||    
T  15972913 tacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgt 15972856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30404869 - 30404926
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| ||||   ||||||||||||||||||||||    
T  30404869 tacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgt 30404926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34785001 - 34785058
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||||||||| ||||| ||||| ||||||||| ||||||||||||||    
T  34785001 tacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgt 34785058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19536416 - 19536474
Alignment:
Q  1 tacactgaattatgtgatttttta-aaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||||||||||||  |||| |||| |||||||||||||||| |||||||    
T  19536416 tacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgt 19536474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6940295 - 6940238
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||| | |||||||||| ||||  |||||||||||||||||||||||    
T  6940295 tacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgt 6940238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12940954 - 12941011
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||| ||||||||| |||| |||| |||||||  |||||||||||||||    
T  12940954 tacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgt 12941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15657904 - 15657847
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||  |||| |||| ||| |||||||||| |||||||||    
T  15657904 tacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgt 15657847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16069273 - 16069330
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||| ||||||||| |||| ||||   ||||||||||||||||||||||    
T  16069273 tacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgt 16069330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21374718 - 21374775
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||| ||||||| |||| ||||  ||||||||||||| |||||||||    
T  21374718 tacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgt 21374775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 37559017 - 37558960
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||| |||||||||||||||||  |||| ||||  |||||||||||||||||||||||    
T  37559017 tacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgt 37558960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12668442 - 12668506
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtg 65  Q
    ||||||||||||||| ||||||| |||| |||| || ||||||||||||||| || || ||||||    
T  12668442 tacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagtatctgtgtttgtg 12668506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29367388 - 29367448
Alignment:
Q  1 tacactgaattatgtga-ttttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 60  Q
    ||||||||||||||||| ||||||||||| |||| ||||| ||||||||| ||||| ||||    
T  29367388 tacactgaattatgtgatttttttaaaattattaattgtgccggcgtgtccgtgtctgtat 29367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18841032 - 18841087
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    |||||| |||||||| ||||||| |||| |||| ||||||| ||||||||||||||    
T  18841032 tacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtcc 18841087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20473362 - 20473308
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||| ||| ||||| |||| |||| |||||||||| ||||||||||    
T  20473362 tacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtc 20473308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24009336 - 24009259
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggttgta 79  Q
    ||||||| ||| ||||||||| ||||| |||||  ||||||| |||||| ||||||||||  ||||||||||| |||||    
T  24009336 tacactgcattttgtgattttctaaaaaaattagctgtgtcgccgtgtc-gtgtccgtatccgtgcttcatagattgta 24009259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36756363 - 36756417
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||| |||| || |||| |||| |||||||| ||||||||||||    
T  36756363 tacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtc 36756417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38117178 - 38117232
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||| ||| ||||||||||||| |||| ||||  ||||||||||||||||||||    
T  38117178 tacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19574018 - 19573958
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtattt 62  Q
    ||||||||||||||| ||||| | |||| |||||  ||||||||||||| ||||||||||||    
T  19574018 tacactgaattatgttattttcttaaattattatcggtgtcggcgtgtc-gtgtccgtattt 19573958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20539693 - 20539750
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||| ||||||||| |||| ||||  ||||||| |||||||||||||||    
T  20539693 tacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgt 20539750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 21616802 - 21616745
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||| | |||| ||||   ||||||||||||| ||||||||    
T  21616802 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgt 21616745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21782837 - 21782890
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||||||||||||||||||| | |||| ||||   ||||||||||||||||||    
T  21782837 tacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30335457 - 30335400
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||| ||||||| |||| |||| |||||||||||||  |||||||||    
T  30335457 tacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgt 30335400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30717549 - 30717606
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| ||||  | ||||||  |||||||||||||    
T  30717549 tacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgt 30717606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33153464 - 33153415
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 50  Q
    ||||||||||||||||||||||| |||| ||||  ||| |||||||||||    
T  33153464 tacactgaattatgtgatttttttaaatcattagatgtttcggcgtgtca 33153415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 51851 - 51794
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  51851 tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 51794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8776992 - 8777049
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||| ||||||||||| |||| |||| ||||||||||||||||||||||||    
T  8776992 tacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 8777049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34595174 - 34595117
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||||| |||||||    
T  34595174 tacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgt 34595117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10770693 - 10770748
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    ||||||||||||||||||||||| |||| |||| |||||| |||||||||||||||    
T  10770693 tacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtcc 10770748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16766737 - 16766682
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    ||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||    
T  16766737 tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 16766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16833348 - 16833294
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||| ||||||||||||| |||| |||| |||||||||||||||||||||    
T  16833348 tacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 16833294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8365538 - 8365595
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||| |||||||||||| |||| |||| |||| ||||||||||||||||||||||||    
T  8365538 tacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgt 8365595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12696364 - 12696307
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||| ||||||| |||| ||||  |||||||||||||||||||||||    
T  12696364 tacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 12696307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17841608 - 17841665
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  17841608 tacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 17841665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 7930343 - 7930288
Alignment:
Q  3 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||| |||||||||||||||| |||| |||| |||||||||| |||||||||||||    
T  7930343 cactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgt 7930288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 426540 - 426590
Alignment:
Q  8 aattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||||| |||| ||||  |||||||||||||||||||||||    
T  426540 aattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgt 426590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5626715 - 5626769
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||| || |||||||| ||||| ||||| |||||||||||||||||||||    
T  5626715 tacactgaactaagtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtc 5626769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1681798 - 1681745
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    |||||||||||| |||||||||| |||| |||| |||||||||||||| |||||    
T  1681798 tacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgt 1681745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 7801179 - 7801228
Alignment:
Q  5 ctgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||||||||||||||||| |||| |||| |||||||||||||| |||||    
T  7801179 ctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 7801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9107389 - 9107446
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||| ||||||||||| |||| ||||  ||||||||||||| |||||||||    
T  9107389 tacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgt 9107446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9658919 - 9658862
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||| | |||| ||||   ||||||||||||||||||||||    
T  9658919 tacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgt 9658862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 853880 - 853928
Alignment:
Q  3 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcag 51  Q
    |||| |||||||||||||||| |||| |||| |||||||||||||||||    
T  853880 cacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcag 853928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7265612 - 7265684
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 73  Q
    ||||||||||||||||||||| | |||| ||||   |||| |||||||||||||||| ||  |||||||||||    
T  7265612 tacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgaatacgtgcttcatag 7265684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7938156 - 7938101
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    |||||| |||||| ||||||||| |||| ||||  |||||||||||||||||||||    
T  7938156 tacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 7938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7977849 - 7977900
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagt 52  Q
    ||||||||||||||| ||||||| |||| ||||  |||||||||||||||||    
T  7977849 tacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 24115871 - 24115918
Alignment:
Q  6 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 53  Q
    |||||||||||||||||| |||| |||| ||||||| |||||||||||    
T  24115871 tgaattatgtgattttttgaaattattagttgtgtcagcgtgtcagtg 24115918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5970127 - 5970181
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||||||||||| |||| ||||  ||||||| |||||| |||||    
T  5970127 tacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtc 5970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 19044503 - 19044449
Alignment:
Q  2 acactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    ||||||||||||||||| || | |||| |||| | ||||||||||||||||||||    
T  19044503 acactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtcc 19044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3398658 - 3398602
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||| |||||||| ||| || |||  |||||||||||||||||||||||    
T  3398658 tacactgaattatatgatttttcaaatta-ttagctgtgtcggcgtgtcagtgtccgt 3398602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17341683 - 17341740
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||| | |||| ||||   ||||||||||||||||| ||||    
T  17341683 tacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgt 17341740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17435239 - 17435182
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||| |||||||||||| ||||  | ||||| ||| |||||||||||    
T  17435239 tacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgt 17435182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28152138 - 28152082
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||||||| |||| |||| ||||  | |||||||||||||||||||||    
T  28152138 tacactgaattatgtgat-ttttcaaattattagctttgtcggcgtgtcagtgtccgt 28152082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 31959199 - 31959146
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||||| ||||||||||||||| |||| ||||  |||| ||||||||||||||    
T  31959199 tacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgt 31959146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14570 - 14498
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgt-cagtgtccgtatttgtgcttcata 72  Q
    ||||||||||||||||||||||| |||| |||| |||||||||||||| | ||||||||||  ||||||||||    
T  14570 tacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtccggtgtccgtatccgtgcttcata 14498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 13438 - 13383
Alignment:
Q  3 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||| | |||| |||| ||||||||||||||||||||||||    
T  13438 cactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgt 13383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 21889 - 21944
Alignment:
Q  3 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||| | |||| |||| ||||||||||||||||||||||||    
T  21889 cactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgt 21944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 178837 - 178895
Alignment:
Q  1 tacactgaattatg-tgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||||    
T  178837 tacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 178895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20212 - 20155
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||||    
T  20212 tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgt 20155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46722 - 46665
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||||    
T  46722 tacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgt 46665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000004; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 11651155 - 11651212
Alignment:
Q  3 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtat 60  Q
    ||||||||||||||||||||| |||| ||||  ||||||| |||||||||||||||||    
T  11651155 cactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtat 11651212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27706196 - 27706251
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    |||||| |||||||||||||||| |||| |||| |||||||| |||||||||||||    
T  27706196 tacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtcc 27706251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4383407 - 4383338
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcat 71  Q
    |||||||||||||||||||||| ||| || ||| |||| ||| |||||||||||||||||  |||||||||    
T  4383407 tacactgaattatgtgatttttcaaatta-ttagttgtatcgacgtgtcagtgtccgtatccgtgcttcat 4383338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 12895300 - 12895342
Alignment:
Q  8 aattatgtgattttttaaaataattatttgtgtcggcgtgtca 50  Q
    |||||||||||||||| |||| |||||||||||||||||||||    
T  12895300 aattatgtgattttttcaaattattatttgtgtcggcgtgtca 12895342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19482708 - 19482654
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||| |||||||||||| |||| |||| |||| |||||||||||||||||||||    
T  19482708 tacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtc 19482654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 23293008 - 23293062
Alignment:
Q  4 actgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||||||||| |||| ||||  ||||||||||||||| |||||||    
T  23293008 actgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgt 23293062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35158004 - 35158061
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||||||||||  |||| |||| ||| ||||||||||||||||||||    
T  35158004 tacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgt 35158061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36635364 - 36635308
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 57  Q
    ||||||||||||||||||||| | |||| |||| | |||| ||||||||||||||||    
T  36635364 tacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccg 36635308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22234909 - 22234984
Alignment:
Q  1 tacactgaattatgtgatttttta-aaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcataggt 75  Q
    |||||||||||||||||||||||  ||||  |||   ||||||||||||| ||||||||||  |||||||||||||    
T  22234909 tacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtccgtatccgtgcttcataggt 22234984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 21945543 - 21945489
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||| ||||||| |||| ||||  ||||||||| ||||||||||    
T  21945543 tacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtc 21945489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30298987 - 30298929
Alignment:
Q  1 tacactgaattatgtgatttttta-aaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||| |||||||  |||| ||||  |||||||||||||||||||||||    
T  30298987 tacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgt 30298929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30327855 - 30327797
Alignment:
Q  1 tacactgaattatgtgatttttta-aaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||| |||||||  |||| ||||  |||||||||||||||||||||||    
T  30327855 tacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgt 30327797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40481676 - 40481623
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    |||||||||||||||||| |||| |||| |||| |||| ||||||||||||||||    
T  40481676 tacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtc 40481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5414191 - 5414248
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||| ||| ||||||||| ||||| |||||  |||||||||||||| ||||||||    
T  5414191 tacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgt 5414248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12797357 - 12797413
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||| ||||| |||| |||| || || ||||||||||||||||||    
T  12797357 tacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccgt 12797413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20743297 - 20743350
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    ||||||||||||||| ||||| | |||| |||||  ||||||||||||||||||    
T  20743297 tacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 20743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40179655 - 40179712
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||  |||| | |||||  |||||||||||||||    
T  40179655 tacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgt 40179712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 49431066 - 49431009
Alignment:
Q  1 tacactgaattatgtgatt-ttttaaaataattatttgtgtcggcgtgtcagtgtccg 57  Q
    ||||||||||||||||||| |||| |||| ||||  ||||||||||||||| ||||||    
T  49431066 tacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccg 49431009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 54580042 - 54580087
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgt 46  Q
    ||||||||||||||||||||||| |||| |||| ||||||| ||||    
T  54580042 tacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 7012105 - 7012049
Alignment:
Q  2 acactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||| ||||| | |||| |||||  ||||||||||||| ||||||||    
T  7012105 acactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgt 7012049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 20521873 - 20521925
Alignment:
Q  6 tgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||||| | |||| |||||  || |||||||||||||||||||    
T  20521873 tgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgt 20521925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 92847 - 92775
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcatag 73  Q
    ||||||||||||||| ||||| | |||| ||||   ||||||||||||||||||||||||  |||||||||||    
T  92847 tacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgtatccgtgcttcatag 92775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000006; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23191936 - 23191865
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttcata 72  Q
    ||||||||| ||||||||||| | |||| ||||   |||||||||| ||||||||||||| |||||||||||    
T  23191936 tacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgtatatgtgcttcata 23191865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24339682 - 24339627
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||    
T  24339682 tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtcc 24339627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25481942 - 25481887
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||||||||| |||||    
T  25481942 tacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtcc 25481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9408353 - 9408407
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    |||||| |||||||||||||||| |||| |||| ||||||||| |||||||||||    
T  9408353 tacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32308160 - 32308079
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc------cgtatttgtgcttcataggtt 76  Q
    ||||||||||||||||||||| | |||| ||||   |||||||||||||||||||      |||||||||||||||||||||    
T  32308160 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccatgttcgtatttgtgcttcataggtt 32308079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13770731 - 13770674
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||| ||||||| |||| ||||  ||||||||||| |||||||||||    
T  13770731 tacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgt 13770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27945081 - 27945024
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||| ||||| | |||| |||| | ||||||||||||||||||||||    
T  27945081 tacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgt 27945024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35862004 - 35861951
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    |||| |||||||||||||||||| |||| |||| |||||||||||||| |||||    
T  35862004 tacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 35861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1656716 - 1656674
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcgg 43  Q
    ||||||||||||||||||||||||||| | ||| |||||||||    
T  1656716 tacactgaattatgtgattttttaaaaaatttagttgtgtcgg 1656674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8234186 - 8234132
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||| ||||||| |||| |||| ||||||||| ||||| |||||    
T  8234186 tacactgaattatgttattttttcaaattattagttgtgtcggtgtgtctgtgtc 8234132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 11061102 - 11061152
Alignment:
Q  8 aattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||||||||| |||| ||||  |||||||| ||||||||||||||    
T  11061102 aattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgt 11061152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 11665462 - 11665508
Alignment:
Q  4 actgaattatgtgattttttaaaataattatttgtgtcggcgtgtca 50  Q
    |||||||||||||||||||| |||| |||| ||||||| ||||||||    
T  11665462 actgaattatgtgattttttcaaattattagttgtgtcagcgtgtca 11665508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15902862 - 15902808
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    |||||| |||||||||||||| | |||| |||||| |||||||| ||||||||||    
T  15902862 tacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtc 15902808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18213052 - 18213110
Alignment:
Q  1 tacactgaattatgtgattttttaaaataa-ttatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||||||||| ||||| || ||| |||||||||||| |||||||||||    
T  18213052 tacactaaattatgtgattttctaaaaaaaattagttgtgtcggcgtatcagtgtccgt 18213110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22868082 - 22868028
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    ||||||||||||||||||||| | | || |||| | |||||||||||||||||||    
T  22868082 tacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtc 22868028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 5409857 - 5409910
Alignment:
Q  3 cactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtcc 56  Q
    ||||||||||||||||||||| |||| ||||  ||| || ||||||||||||||    
T  5409857 cactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtcc 5409910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7438746 - 7438693
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    |||| |||||||||||||||||| |||| ||||  ||||||||| |||||||||    
T  7438746 tacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 18215205 - 18215262
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||| ||||||||||||||| |||| ||||  || |||||||||| |||||||||    
T  18215205 tacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgt 18215262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24105718 - 24105661
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||||||| |||  ||||||| |||| ||||  |||||||||||||||||||||||    
T  24105718 tacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 24105661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41020536 - 41020483
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgt 54  Q
    |||||| |||||||||||||||  |||| |||| |||||||| |||||||||||    
T  41020536 tacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtcagtgt 41020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43027488 - 43027545
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||| ||||||||||||||| |||| ||||  || |||| |||||||||||||||    
T  43027488 tacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgt 43027545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43250033 - 43249976
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||| ||||||| ||||| | |||| |||||  ||||||||||||||||||||||    
T  43250033 tacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgt 43249976  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22602729 - 22602781
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtg 53  Q
    ||||||||||||||||||||| | ||||||||    |||||||||||||||||    
T  22602729 tacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtg 22602781  T

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Target: scaffold0450 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 8660 - 8722
Alignment:
Q  7 gaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatttgtgcttc 69  Q
    |||||||||||| |||| |||| |||| |||||||||| ||||||||| |||||| |||||||    
T  8660 gaattatgtgatattttcaaattattagttgtgtcggcatgtcagtgttcgtattcgtgcttc 8722  T

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Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23460 - 23406
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    |||||||||||||||||||||||  | | ||||| ||||||||||||||||||||    
T  23460 tacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtc 23406  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 241634 - 241577
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| |||||||||||||||  |||| ||||  |||||||||||||||||||||||    
T  241634 tacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgt 241577  T

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Target: scaffold0246 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19615 - 19562
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 55  Q
    |||||||||||||||||| |||| |||| |||| |||| ||||||||||||||||    
T  19615 tacactgaattatgtgat-ttttcaaattattagttgtatcggcgtgtcagtgtc 19562  T

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Target: scaffold0652 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 481 - 538
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||| ||||||||||| |||| ||||   |||||||||| |||||||||||    
T  481 tacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgt 538  T

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Target: scaffold0227 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7330 - 7403
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgt-cagtgtccgtatttgtgcttcatag 73  Q
    |||||| |||||||||||||||  |||| |||| |||||||||||||| | ||||| ||||  |||||||||||    
T  7330 tacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtccggtgtctgtatccgtgcttcatag 7403  T

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Target: scaffold0053 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8838 - 8781
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    |||||| ||| || ||||||||| |||| ||||  |||||||||||||||||||||||    
T  8838 tacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgt 8781  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 130522 - 130465
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||||||||||||||||||| |||  ||||  ||||||||| ||||| |||||||    
T  130522 tacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgt 130465  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 225295 - 225344
Alignment:
Q  9 attatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 58  Q
    ||||||| ||||| | |||| ||||| |||||||||||||||||||||||    
T  225295 attatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgt 225344  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8050 - 8002
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 49  Q
    ||||||| ||||| ||||||||| |||| |||| |||||||||||||||    
T  8050 tacactgtattatatgattttttcaaattattagttgtgtcggcgtgtc 8002  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33382 - 33430
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtc 49  Q
    ||||||||||||||| ||||||| |||| ||||  ||||||||||||||    
T  33382 tacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17768 - 17824
Alignment:
Q  1 tacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 57  Q
    |||||| |||||||||||||||| |||| |||| ||||||| |||||| | ||||||    
T  17768 tacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtccg 17824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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