View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7801_low_16 (Length: 250)
Name: NF7801_low_16
Description: NF7801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7801_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 1928167 - 1928398
Alignment:
| Q |
1 |
catgattatattttgtacacaggttgtagtggacagctaaataatttgaaaatccaaaagacacttaacaacaactacaactaaaacccttactaggtgc |
100 |
Q |
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| T |
1928167 |
catgattatattttgtacacaggttgtagtggacagctaaataatttgaaaatccaaaagacacttaacaacaactacaactaaaacccttactaggtgc |
1928266 |
T |
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| Q |
101 |
ggttaactacatgggatcgaacaatgctataatatcctatcatgaatcatgcctgctgagactgcttatatccaaatccctctagatagtttgacnnnnn |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1928267 |
ggttaactacatgggatcgaacaatgctataatatcctatcatgaatcatgcctgctgagactgcttatatccaaatccctctagatagtttgacaaaaa |
1928366 |
T |
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| Q |
201 |
nnctcttaatctctctgagccactaactattg |
232 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
1928367 |
aactcttaatctctctgagccactaactattg |
1928398 |
T |
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