View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7801_low_18 (Length: 237)
Name: NF7801_low_18
Description: NF7801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7801_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 37864917 - 37865140
Alignment:
| Q |
1 |
tctaattgcatattattagttctaatttttagttttaaggtcgtatatgattaagtggttcatgccattgatgggttaaaattgtacaactggttcggta |
100 |
Q |
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| T |
37864917 |
tctaattgcatattattagttctaatttttagttttaaggtcgtatatgattaagtggttcatgccattgatgggttaaaattgtacaactggttcggta |
37865016 |
T |
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| Q |
101 |
agtagttttaatttttagaacgaggagaaaacgaggagaaaaatgttcaactggttcggtaagtttatttattttagaaatttgattctactaaagattc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37865017 |
agtagttttaatttttagaacgaggagaaaacgaggagaaaaatgtacaactggttcggtaagtttatttattttagaaatttgattctactaaagattc |
37865116 |
T |
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| Q |
201 |
taactaacttattttcttcttagt |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
37865117 |
taactaacttattttcttcttagt |
37865140 |
T |
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