View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7801_low_5 (Length: 628)

Name: NF7801_low_5
Description: NF7801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7801_low_5
NF7801_low_5
[»] chr4 (23 HSPs)
chr4 (415-616)||(24923130-24923331)
chr4 (427-505)||(17141822-17141900)
chr4 (424-508)||(32215876-32215960)
chr4 (390-490)||(5405272-5405373)
chr4 (424-504)||(52296689-52296769)
chr4 (415-490)||(17008262-17008338)
chr4 (415-490)||(17022226-17022302)
chr4 (415-478)||(20866844-20866907)
chr4 (433-504)||(40096371-40096442)
chr4 (433-504)||(40111382-40111453)
chr4 (415-504)||(6514719-6514808)
chr4 (380-421)||(6558391-6558432)
chr4 (134-178)||(10639654-10639698)
chr4 (415-478)||(772263-772326)
chr4 (380-431)||(12784636-12784687)
chr4 (415-477)||(12997513-12997575)
chr4 (424-504)||(638078-638159)
chr4 (380-421)||(17094057-17094098)
chr4 (378-431)||(24464332-24464385)
chr4 (415-455)||(4749048-4749088)
chr4 (387-431)||(14659997-14660041)
chr4 (387-431)||(34270791-34270835)
chr4 (387-431)||(40465190-40465234)
[»] chr3 (38 HSPs)
chr3 (415-616)||(16289392-16289593)
chr3 (424-507)||(2216573-2216656)
chr3 (415-505)||(11262290-11262381)
chr3 (415-510)||(4444300-4444395)
chr3 (433-504)||(5203750-5203821)
chr3 (433-504)||(9723247-9723318)
chr3 (433-504)||(22876730-22876801)
chr3 (433-504)||(22891790-22891861)
chr3 (433-504)||(22861571-22861642)
chr3 (433-504)||(35874979-35875050)
chr3 (433-504)||(35890048-35890119)
chr3 (377-431)||(19365107-19365161)
chr3 (424-504)||(13603394-13603475)
chr3 (415-490)||(4887657-4887733)
chr3 (415-490)||(5517770-5517846)
chr3 (134-178)||(27339826-27339870)
chr3 (415-477)||(1775817-1775880)
chr3 (380-431)||(15731891-15731942)
chr3 (380-431)||(15746976-15747027)
chr3 (380-431)||(19448288-19448339)
chr3 (380-421)||(19927258-19927299)
chr3 (433-504)||(22378335-22378407)
chr3 (433-504)||(22393269-22393341)
chr3 (433-504)||(21668994-21669065)
chr3 (433-504)||(21684200-21684271)
chr3 (433-504)||(24999977-25000048)
chr3 (381-431)||(5661519-5661569)
chr3 (136-178)||(14537464-14537506)
chr3 (381-431)||(16420466-16420516)
chr3 (415-456)||(1005750-1005791)
chr3 (382-431)||(14142778-14142827)
chr3 (415-460)||(20053174-20053219)
chr3 (415-460)||(20075834-20075879)
chr3 (464-505)||(28364240-28364281)
chr3 (378-431)||(32289737-32289790)
chr3 (378-431)||(32300024-32300077)
chr3 (387-431)||(1734166-1734210)
chr3 (464-504)||(8580791-8580831)
[»] chr6 (31 HSPs)
chr6 (427-616)||(16587648-16587837)
chr6 (427-616)||(16607543-16607732)
chr6 (415-505)||(3042351-3042441)
chr6 (415-510)||(24919122-24919217)
chr6 (415-510)||(20215970-20216065)
chr6 (415-510)||(22109991-22110086)
chr6 (425-510)||(17092481-17092566)
chr6 (415-510)||(24296432-24296526)
chr6 (415-510)||(24310463-24310557)
chr6 (424-478)||(5488178-5488232)
chr6 (415-466)||(27048678-27048729)
chr6 (415-466)||(27058922-27058973)
chr6 (429-510)||(13289800-13289881)
chr6 (429-510)||(13304767-13304848)
chr6 (433-504)||(3691944-3692015)
chr6 (433-504)||(13775622-13775693)
chr6 (433-504)||(21171068-21171139)
chr6 (380-431)||(31540422-31540473)
chr6 (381-431)||(8729747-8729797)
chr6 (381-431)||(18816169-18816219)
chr6 (380-430)||(22481363-22481413)
chr6 (381-431)||(27293909-27293959)
chr6 (378-431)||(27352158-27352211)
chr6 (378-431)||(27364271-27364324)
chr6 (378-431)||(27454614-27454667)
chr6 (415-456)||(30996952-30996993)
chr6 (380-421)||(34472489-34472530)
chr6 (134-178)||(12452529-12452573)
chr6 (387-431)||(12616375-12616419)
chr6 (387-431)||(22255302-22255346)
chr6 (138-178)||(33299390-33299430)
[»] chr2 (31 HSPs)
chr2 (415-616)||(28479775-28479976)
chr2 (430-616)||(21149865-21150051)
chr2 (473-616)||(27682593-27682736)
chr2 (415-510)||(39756243-39756338)
chr2 (415-510)||(21322006-21322101)
chr2 (415-510)||(27425291-27425386)
chr2 (415-510)||(27440337-27440432)
chr2 (415-504)||(34543049-34543138)
chr2 (433-504)||(11647213-11647284)
chr2 (425-503)||(17686391-17686470)
chr2 (415-465)||(21851541-21851591)
chr2 (415-465)||(21859976-21860026)
chr2 (415-504)||(34529075-34529165)
chr2 (134-178)||(25495081-25495125)
chr2 (433-504)||(3781113-3781184)
chr2 (433-504)||(3793386-3793457)
chr2 (433-504)||(19558087-19558158)
chr2 (433-504)||(21667995-21668066)
chr2 (433-504)||(21682996-21683067)
chr2 (380-421)||(18139998-18140039)
chr2 (134-178)||(17686010-17686054)
chr2 (433-504)||(11626004-11626075)
chr2 (433-504)||(16031743-16031814)
chr2 (380-431)||(39884443-39884494)
chr2 (380-431)||(39900019-39900070)
chr2 (381-431)||(34307532-34307582)
chr2 (424-477)||(20622436-20622489)
chr2 (415-456)||(25262592-25262633)
chr2 (415-456)||(33308188-33308229)
chr2 (464-504)||(24044051-24044091)
chr2 (423-455)||(25193117-25193149)
[»] scaffold0016 (1 HSPs)
scaffold0016 (177-470)||(24481-24771)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-103)||(20238-20344)
[»] scaffold0609 (1 HSPs)
scaffold0609 (427-505)||(2518-2596)
[»] scaffold0605 (1 HSPs)
scaffold0605 (526-616)||(1-91)
[»] scaffold0206 (1 HSPs)
scaffold0206 (415-510)||(19461-19556)
[»] chr8 (12 HSPs)
chr8 (280-361)||(36253817-36253898)
chr8 (415-504)||(4838719-4838808)
chr8 (424-477)||(23091540-23091593)
chr8 (380-431)||(15209277-15209328)
chr8 (424-503)||(26875130-26875209)
chr8 (410-477)||(36577967-36578034)
chr8 (415-504)||(4836459-4836549)
chr8 (415-504)||(4841904-4841994)
chr8 (464-504)||(12481316-12481356)
chr8 (138-178)||(17974921-17974961)
chr8 (464-504)||(21925594-21925634)
chr8 (415-455)||(26872663-26872703)
[»] chr7 (34 HSPs)
chr7 (415-510)||(4185129-4185224)
chr7 (433-504)||(18537982-18538053)
chr7 (433-504)||(18548490-18548561)
chr7 (433-504)||(5167716-5167787)
chr7 (415-471)||(38411770-38411826)
chr7 (433-504)||(3057074-3057145)
chr7 (433-504)||(4197827-4197898)
chr7 (433-504)||(4208662-4208733)
chr7 (380-431)||(5803153-5803204)
chr7 (433-504)||(9614430-9614501)
chr7 (433-504)||(13737317-13737388)
chr7 (380-431)||(15853178-15853229)
chr7 (424-467)||(16474429-16474472)
chr7 (415-466)||(17515793-17515844)
chr7 (415-466)||(17537370-17537421)
chr7 (135-178)||(25728540-25728583)
chr7 (433-504)||(39993157-39993227)
chr7 (424-466)||(559895-559937)
chr7 (424-466)||(569804-569846)
chr7 (433-504)||(22833824-22833896)
chr7 (380-431)||(15478397-15478448)
chr7 (433-504)||(16742156-16742227)
chr7 (433-504)||(17517909-17517980)
chr7 (433-504)||(17535234-17535305)
chr7 (433-504)||(31555088-31555159)
chr7 (433-504)||(31570077-31570148)
chr7 (381-431)||(6223945-6223995)
chr7 (377-431)||(7368116-7368170)
chr7 (381-431)||(18460645-18460695)
chr7 (415-456)||(5200602-5200643)
chr7 (415-456)||(5209731-5209772)
chr7 (415-464)||(15974735-15974784)
chr7 (415-456)||(27967389-27967430)
chr7 (415-456)||(27976842-27976883)
[»] chr1 (12 HSPs)
chr1 (415-510)||(18597042-18597137)
chr1 (134-178)||(28459076-28459120)
chr1 (380-431)||(16404576-16404627)
chr1 (433-504)||(51634010-51634081)
chr1 (433-504)||(51647449-51647520)
chr1 (415-465)||(18750196-18750246)
chr1 (415-483)||(13463808-13463876)
chr1 (380-420)||(20344551-20344591)
chr1 (380-431)||(21888132-21888183)
chr1 (136-178)||(41745550-41745592)
chr1 (425-504)||(179835-179915)
chr1 (381-421)||(21085057-21085097)
[»] chr5 (31 HSPs)
chr5 (414-504)||(29189205-29189295)
chr5 (433-504)||(41669249-41669320)
chr5 (433-504)||(41684056-41684127)
chr5 (134-178)||(31412099-31412143)
chr5 (415-465)||(31549536-31549586)
chr5 (415-471)||(29185269-29185325)
chr5 (433-504)||(8656225-8656296)
chr5 (433-504)||(8671199-8671270)
chr5 (433-504)||(24693939-24694010)
chr5 (433-504)||(37349329-37349400)
chr5 (433-504)||(37364378-37364449)
chr5 (138-178)||(21930701-21930741)
chr5 (380-431)||(3942787-3942838)
chr5 (380-431)||(16681542-16681593)
chr5 (433-504)||(24611486-24611557)
chr5 (380-431)||(24613233-24613284)
chr5 (380-431)||(24672861-24672912)
chr5 (380-431)||(24709635-24709686)
chr5 (380-431)||(24742629-24742680)
chr5 (380-431)||(24755399-24755450)
chr5 (380-431)||(24946446-24946497)
chr5 (380-431)||(24979311-24979362)
chr5 (380-431)||(34494696-34494747)
chr5 (381-431)||(572022-572072)
chr5 (381-431)||(11544670-11544720)
chr5 (381-431)||(11558729-11558779)
chr5 (381-431)||(18062783-18062833)
chr5 (423-464)||(2826865-2826906)
chr5 (464-505)||(18381207-18381248)
chr5 (464-505)||(34610884-34610925)
chr5 (464-505)||(34626001-34626042)
[»] scaffold0669 (1 HSPs)
scaffold0669 (424-508)||(6043-6127)
[»] scaffold0372 (1 HSPs)
scaffold0372 (415-504)||(15468-15557)
[»] scaffold2066 (1 HSPs)
scaffold2066 (433-504)||(826-897)
[»] scaffold0091 (1 HSPs)
scaffold0091 (135-178)||(19079-19122)
[»] scaffold0853 (1 HSPs)
scaffold0853 (440-510)||(4216-4286)
[»] scaffold1120 (1 HSPs)
scaffold1120 (415-499)||(351-436)
[»] scaffold0278 (1 HSPs)
scaffold0278 (134-178)||(9699-9743)
[»] scaffold0740 (1 HSPs)
scaffold0740 (380-431)||(720-771)
[»] scaffold0240 (1 HSPs)
scaffold0240 (380-431)||(21693-21744)
[»] scaffold0184 (1 HSPs)
scaffold0184 (380-431)||(21658-21709)
[»] scaffold0177 (1 HSPs)
scaffold0177 (380-431)||(168-219)
[»] scaffold0078 (1 HSPs)
scaffold0078 (380-431)||(51135-51186)
[»] scaffold0039 (1 HSPs)
scaffold0039 (134-176)||(39483-39525)
[»] scaffold0027 (2 HSPs)
scaffold0027 (415-505)||(64674-64764)
scaffold0027 (136-178)||(64306-64348)
[»] scaffold1896 (2 HSPs)
scaffold1896 (138-178)||(840-880)
scaffold1896 (415-503)||(393-481)
[»] scaffold0260 (1 HSPs)
scaffold0260 (380-420)||(6874-6914)
[»] scaffold0362 (1 HSPs)
scaffold0362 (433-504)||(17543-17614)
[»] scaffold0055 (1 HSPs)
scaffold0055 (380-431)||(8430-8481)
[»] scaffold0052 (1 HSPs)
scaffold0052 (380-431)||(76054-76105)
[»] scaffold0021 (1 HSPs)
scaffold0021 (380-431)||(60349-60400)
[»] scaffold1942 (1 HSPs)
scaffold1942 (381-431)||(279-329)
[»] scaffold1376 (1 HSPs)
scaffold1376 (464-504)||(977-1017)
[»] scaffold0156 (1 HSPs)
scaffold0156 (340-368)||(34178-34206)
[»] scaffold0061 (1 HSPs)
scaffold0061 (387-431)||(33045-33089)
[»] scaffold0017 (1 HSPs)
scaffold0017 (387-431)||(165702-165746)


Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-100; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 415 - 616
Target Start/End: Complemental strand, 24923331 - 24923130
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctctaggtt 514  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24923331 tccggcgcagtggccggtggtggtgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaacatcctttttcctctaggtt 24923232  T
Q  515 acgaaaatcaacttagtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagtactttctacctcttcctctgtctctg 614  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24923231 acgaaaatcaacttagtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagaactttctacctcttcctctgtctctg 24923132  T
Q  615 ct 616  Q
    ||    
T  24923131 ct 24923130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 427 - 505
Target Start/End: Complemental strand, 17141900 - 17141822
Alignment:
Q  427 gccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttc 505  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||    
T  17141900 gccggtggtggcgccaccgcgccggagttttaaaatcctccgattcaaaaactttttacgtttttaaacatcctttttc 17141822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 424 - 508
Target Start/End: Complemental strand, 32215960 - 32215876
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctc 508  Q
    ||||||||||||||| ||||||||||||||||  |||| ||||||||||| |||||||||||||||||||| |||||||||||||    
T  32215960 gtggccggtggtggcaccaccgcgccggagttcgaaacccctccgattcataaactttttacatttttaaacatcctttttcctc 32215876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 390 - 490
Target Start/End: Original strand, 5405272 - 5405373
Alignment:
Q  390 catcttctccggtgaactttgttcctccggcggagtggccggtggtggcgccaccgcgccggagtttt-aaactcctccgattcaaaaactttttacatt 488  Q
    ||||||||||||||| |  || |  |||||||  |||||||||||||||||| ||||||||||||||| ||||||||| | |||||||| ||||||| ||    
T  5405272 catcttctccggtgagcagtggttttccggcgcggtggccggtggtggcgccgccgcgccggagttttaaaactcctctgtttcaaaaattttttacgtt 5405371  T
Q  489 tt 490  Q
    ||    
T  5405372 tt 5405373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 424 - 504
Target Start/End: Complemental strand, 52296769 - 52296689
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||||||||| |||| |||||||||||  ||||||| |||||||||||||   |||| |||||||| |||||||||    
T  52296769 gtggccggtggtggcaccactgcgccggagttcaaaactccgccgattcaaaaacaaattacctttttaaacatccttttt 52296689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 490
Target Start/End: Complemental strand, 17008338 - 17008262
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagtttt-aaactcctccgattcaaaaactttttacatttt 490  Q
    |||||||  |||||||||||||||| | ||||||||||||||| ||||||||||| |||||||  ||||||| ||||    
T  17008338 tccggcgcggtggccggtggtggcgtcgccgcgccggagttttaaaactcctccgtttcaaaatttttttacgtttt 17008262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 490
Target Start/End: Complemental strand, 17022302 - 17022226
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagtttt-aaactcctccgattcaaaaactttttacatttt 490  Q
    |||||||  |||||||||||||||| | ||||||||||||||| ||||||||||| |||||||  ||||||| ||||    
T  17022302 tccggcgcggtggccggtggtggcgtcgccgcgccggagttttaaaactcctccgtttcaaaatttttttacgtttt 17022226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 478
Target Start/End: Original strand, 20866844 - 20866907
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaac 478  Q
    |||||||  ||||||||||||||| |||||||||| |||| | ||||||| |||||||||||||    
T  20866844 tccggcgcggtggccggtggtggcaccaccgcgccagagtgtgaaactccgccgattcaaaaac 20866907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 40096371 - 40096442
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||| ||||| |||||||||| |   ||||||| |||||||| |||||||||    
T  40096371 ggtggcgcctccgcgccggagtttgaaactgctccgattcacattttttttacgtttttaaacatccttttt 40096442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 40111382 - 40111453
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||| ||||| |||||||||| |   ||||||| |||||||| |||||||||    
T  40111382 ggtggcgcctccgcgccggagtttgaaactgctccgattcacattttttttacgtttttaaacatccttttt 40111453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 504
Target Start/End: Original strand, 6514719 - 6514808
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||| || || ||| ||||||||| |||||||||||||  ||||| |||||||||||    ||||||| |||||||| |||||||||    
T  6514719 tccggcgcagcggacggcggtggcgcctccgcgccggagttcgaaactgctccgattcaatttttttttacgtttttaaacatccttttt 6514808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 6558391 - 6558432
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcg 421  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  6558391 agatgatcttcatcttctccggtgaagtttgttcctccggcg 6558432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 10639698 - 10639654
Alignment:
Q  134 atagatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||    
T  10639698 atagatcttgaccgtctgatgaattagaaggtctagatctaatca 10639654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 478
Target Start/End: Complemental strand, 772326 - 772263
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaac 478  Q
    |||||||  ||||||||||||||| || |||||||||||| | ||||||| || ||||||||||    
T  772326 tccggcgcggtggccggtggtggcacctccgcgccggagtgtgaaactccgccaattcaaaaac 772263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 12784687 - 12784636
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||  ||| ||||||||||  ||||||||    
T  12784687 agatgaacttcatcttctccggtgaagcttgctcctccggcgtggtggccgg 12784636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 12997575 - 12997513
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaa 477  Q
    |||||||  ||||||||||||||| ||||||||||||||||  ||  | ||||||||||||||    
T  12997575 tccggcgcggtggccggtggtggcaccaccgcgccggagttcaaacttactccgattcaaaaa 12997513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 504
Target Start/End: Original strand, 638078 - 638159
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcc-tccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||||||||| ||||||||||||||||  ||||||| ||| | ||||||| |||| ||  ||||| | |||||||||    
T  638078 gtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 638159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 17094098 - 17094057
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcg 421  Q
    ||||||||||||||||||||||||||| ||| | ||||||||    
T  17094098 agatgaacttcatcttctccggtgaaccttgcttctccggcg 17094057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 24464332 - 24464385
Alignment:
Q  378 ggagatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||| ||||||||||||||| | | |||||||||||||||  ||||||||    
T  24464332 ggagatgatcttcatcttctccggcggagtttgttcctccggcgtggtggccgg 24464385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 455
Target Start/End: Original strand, 4749048 - 4749088
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagtt 455  Q
    |||||||  ||||||||||||||| ||||||||||||||||    
T  4749048 tccggcgcggtggccggtggtggcaccaccgcgccggagtt 4749088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 14659997 - 14660041
Alignment:
Q  387 cttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||  |||||||||||||||  ||||||||    
T  14659997 cttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 14660041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 431
Target Start/End: Complemental strand, 34270835 - 34270791
Alignment:
Q  387 cttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||    
T  34270835 cttcatcttctccggtgaagcttgttcctccggcgtggtggccgg 34270791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 40465190 - 40465234
Alignment:
Q  387 cttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||    
T  40465190 cttcatcttctccggtgaagcttgttcctccggcgtggtggccgg 40465234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 182; Significance: 4e-98; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 415 - 616
Target Start/End: Complemental strand, 16289593 - 16289392
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctctaggtt 514  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16289593 tccggcgcggtggccggtggtggcgccaccgcgccggagttttaaagtcctccgattcaaaaactttttacatttttaaacatcctttttcctctaggtt 16289494  T
Q  515 acgaaaatcaacttagtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagtactttctacctcttcctctgtctctg 614  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16289493 acgaaaatcaacttagtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagaactttctacctcttcctctgtctctg 16289394  T
Q  615 ct 616  Q
    ||    
T  16289393 ct 16289392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 424 - 507
Target Start/End: Original strand, 2216573 - 2216656
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcct 507  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  2216573 gtggccggtggtggcgccaccgcgccggagtttcaaactcctccgattcaaaaactttttatatttttaaacatcctttttcct 2216656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 415 - 505
Target Start/End: Original strand, 11262290 - 11262381
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccgg-agttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttc 505  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  11262290 tccggcgcggtggccggtggtggcgccaccgcgccgggagttttaaactcctccgattcaaaaactttttacgtttttaaacatcctttttc 11262381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 415 - 510
Target Start/End: Complemental strand, 4444395 - 4444300
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  |||||||| |||||| ||||| ||||||||||  ||||||||||||||||||   || ||||||||||||| |||||||||| ||||    
T  4444395 tccggcgcggtggccggcggtggcaccaccacgccggagttcaaaactcctccgattcaaatttttcttacatttttaaacatcctttttcttcta 4444300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 5203821 - 5203750
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||||||||| ||||| || |||||||||    
T  5203821 ggtggcgcctccgcgccggagttcgaaacttctccgattcaaaaactttttacgtttttgaacatccttttt 5203750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 9723247 - 9723318
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||||||||| ||||| || |||||||||    
T  9723247 ggtggcgcctccgcgccggagttcgaaacttctccgattcaaaaactttttacgtttttgaacatccttttt 9723318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 22876730 - 22876801
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||| ||||||| |||||||| |||||||||    
T  22876730 ggtggcgcctccgcgccggagttcgaaacttctccgattcaaaaattttttacgtttttaaacatccttttt 22876801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 22891790 - 22891861
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||| ||||||| |||||||| |||||||||    
T  22891790 ggtggcgcctccgcgccggagttcgaaacttctccgattcaaaaattttttacgtttttaaacatccttttt 22891861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 22861571 - 22861642
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||  ||||||| |||||||| |||||||||    
T  22861571 ggtggcgcctccgcgccggagttcgaaacttctccgattcaaaatttttttacgtttttaaacatccttttt 22861642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 35875050 - 35874979
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||    
T  35875050 ggtggcgcctccgcgccggagttcgaaacttctccgattcaaaaactttttacgtttttggacatccttttt 35874979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 35890119 - 35890048
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||    
T  35890119 ggtggcgcctccgcgccggagttcgaaacttctccgattcaaaaactttttacgtttttggacatccttttt 35890048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 431
Target Start/End: Original strand, 19365107 - 19365161
Alignment:
Q  377 gggagatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||    
T  19365107 gggagatgaacttcatcttctccggcgaaccttgttcctccggcgcggtggccgg 19365161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 424 - 504
Target Start/End: Original strand, 13603394 - 13603475
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagtttt-aaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||| ||||||| |||||||||||||||||| ||||||| || | ||||||| | ||||| |||||||| |||||||||    
T  13603394 gtggccgatggtggcaccaccgcgccggagttttcaaactccgccaaatcaaaaattatttacgtttttaaacatccttttt 13603475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 490
Target Start/End: Complemental strand, 4887733 - 4887657
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagtttt-aaactcctccgattcaaaaactttttacatttt 490  Q
    |||||||  |||||||||||||||||| ||||||||||||||| ||||||||| | |||||||  ||||||| ||||    
T  4887733 tccggcgcggtggccggtggtggcgccgccgcgccggagttttaaaactcctctgtttcaaaatttttttacgtttt 4887657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 490
Target Start/End: Original strand, 5517770 - 5517846
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagtttt-aaactcctccgattcaaaaactttttacatttt 490  Q
    |||||||  |||||||||||||||||| ||||||||||||||| ||||||||| | |||||||  ||||||| ||||    
T  5517770 tccggcgcggtggccggtggtggcgccgccgcgccggagttttaaaactcctctgtttcaaaatttttttacgtttt 5517846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 27339826 - 27339870
Alignment:
Q  134 atagatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  27339826 atagatctagaccgtctgatgaatcagaaggtctagatctaatca 27339870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 1775880 - 1775817
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagtttt-aaactcctccgattcaaaaa 477  Q
    |||||||  |||||||||||||||||| ||||||||||||||| ||||||||| | ||||||||    
T  1775880 tccggcgcggtggccggtggtggcgccgccgcgccggagttttaaaactcctctgtttcaaaaa 1775817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 15731891 - 15731942
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||  ||||||||||||||  ||||||||    
T  15731891 agatgaacttcatcttctccggtgaaacttgttcctccggcgtggtggccgg 15731942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 15746976 - 15747027
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||  ||||||||||||||  ||||||||    
T  15746976 agatgaacttcatcttctccggtgaaacttgttcctccggcgtggtggccgg 15747027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 19448339 - 19448288
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||||||||||||||||||||  |||||||||||||||  ||||||||    
T  19448339 agatgaacttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 19448288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 421
Target Start/End: Complemental strand, 19927299 - 19927258
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcg 421  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  19927299 agatgaacttcatcttctccggtgaaacttgttcctccggcg 19927258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 22378335 - 22378407
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattc-aaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| || |||||| ||||||||||||| ||||| || |||||||||    
T  22378335 ggtggcgcctccgcgccggagttcgaaacttcttcgattcaaaaaactttttacgtttttgaacatccttttt 22378407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 22393269 - 22393341
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattc-aaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| || |||||| ||||||||||||| ||||| || |||||||||    
T  22393269 ggtggcgcctccgcgccggagttcgaaacttcttcgattcaaaaaactttttacgtttttgaacatccttttt 22393341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 21669065 - 21668994
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||| ||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  21669065 ggtggcgcctccgcgccggaattcgaaacttctccgattcaaattttttttacgtttttaaacatccttttt 21668994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 21684271 - 21684200
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||| ||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  21684271 ggtggcgcctccgcgccggaattcgaaacttctccgattcaaattttttttacgtttttaaacatccttttt 21684200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 24999977 - 25000048
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||||||| ||||||   | ||||| ||||||||| | || |||||||||||||||| |||||||||    
T  24999977 ggtggcgccaccgtgccggaaaatcaaactgctccgattcgagaaatttttacatttttaaatatccttttt 25000048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Complemental strand, 5661569 - 5661519
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  5661569 gatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 5661519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 14537464 - 14537506
Alignment:
Q  136 agatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  14537464 agatctggaccgttcgatgaatcagaaggtctagatctaatca 14537506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 16420466 - 16420516
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  16420466 gatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 16420516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 1005750 - 1005791
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttt 456  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
T  1005750 tccggcgcggtggccggtggtggcaccaccgcgccggagttt 1005791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 431
Target Start/End: Original strand, 14142778 - 14142827
Alignment:
Q  382 atgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  14142778 atgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 14142827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 460
Target Start/End: Complemental strand, 20053219 - 20053174
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaa 460  Q
    |||||||  |||||||||||||||||| ||||||||||| ||||||    
T  20053219 tccggcgcggtggccggtggtggcgccgccgcgccggagctttaaa 20053174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 460
Target Start/End: Complemental strand, 20075879 - 20075834
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaa 460  Q
    |||||||  |||||||||||||||||| ||||||||||| ||||||    
T  20075879 tccggcgcggtggccggtggtggcgccgccgcgccggagctttaaa 20075834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 505
Target Start/End: Original strand, 28364240 - 28364281
Alignment:
Q  464 ctccgattcaaaaactttttacatttttaaagatcctttttc 505  Q
    |||||||||||||| ||||||| |||||||| ||||||||||    
T  28364240 ctccgattcaaaaaatttttacgtttttaaacatcctttttc 28364281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Complemental strand, 32289790 - 32289737
Alignment:
Q  378 ggagatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||| ||||||||||||||| | | |||||||||||||||  ||||||||    
T  32289790 ggagatgatcttcatcttctccggcggagtttgttcctccggcgtggtggccgg 32289737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Complemental strand, 32300077 - 32300024
Alignment:
Q  378 ggagatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||| ||||||||||||||| | | |||||||||||||||  ||||||||    
T  32300077 ggagatgatcttcatcttctccggcggagtttgttcctccggcgtggtggccgg 32300024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 1734166 - 1734210
Alignment:
Q  387 cttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||  |||||||||||||||  ||||||||    
T  1734166 cttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 1734210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 504
Target Start/End: Complemental strand, 8580831 - 8580791
Alignment:
Q  464 ctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||||||||||  |||||||||||||||| |||||||||    
T  8580831 ctccgattcaaaatttttttacatttttaaacatccttttt 8580791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 174; Significance: 3e-93; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 427 - 616
Target Start/End: Complemental strand, 16587837 - 16587648
Alignment:
Q  427 gccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctctaggttacgaaaatcaac 526  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16587837 gccggtggtggcgccaccgcgccggagtttcaaactcttccgattcaaaaactttttacatttttaaacatcctttttcctctaggttacgaaaatcaac 16587738  T
Q  527 ttagtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagtactttctacctcttcctctgtctctgct 616  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16587737 ttagtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagaactttctacctcttcctctgtctctgct 16587648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 427 - 616
Target Start/End: Original strand, 16607543 - 16607732
Alignment:
Q  427 gccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctctaggttacgaaaatcaac 526  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16607543 gccggtggtggcgccaccgcgccggagtttcaaactcttccgattcaaaaactttttacatttttaaacatcctttttcctctaggttacgaaaatcaac 16607642  T
Q  527 ttagtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagtactttctacctcttcctctgtctctgct 616  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  16607643 ttagtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagaactttctacctcttcctctgtctctgct 16607732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 415 - 505
Target Start/End: Complemental strand, 3042441 - 3042351
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttc 505  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  3042441 tccggcgcggtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacgtttttaaacatcctttttc 3042351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 415 - 510
Target Start/End: Complemental strand, 24919217 - 24919122
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  ||||||||  ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  24919217 tccggcgcggtggccggcagtggcaccaccgcgccggagttcgaaactcctccgattcaaaaactttttacatttttaaacatcctttttcttcta 24919122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 415 - 510
Target Start/End: Complemental strand, 20216065 - 20215970
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  |||||||| |||||| |||||||||||||| |  ||||| ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  20216065 tccggcgcggtggccggcggtggcaccaccgcgccggagctcaaaacttctccgattcaaaaactttttacatttttaaacatcctttttcttcta 20215970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 415 - 510
Target Start/End: Complemental strand, 22110086 - 22109991
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  |||||||| |||||| |||||||||||||| |  ||||| ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  22110086 tccggcgcggtggccggcggtggcaccaccgcgccggagctcaaaacttctccgattcaaaaactttttacatttttaaacatcctttttcttcta 22109991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 510
Target Start/End: Original strand, 17092481 - 17092566
Alignment:
Q  425 tggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    ||||||| |||||||||||| ||||||||||  |||||||||||||||||||| ||||||||||||| || |||||||||| ||||    
T  17092481 tggccggcggtggcgccaccacgccggagttcaaaactcctccgattcaaaaattttttacatttttgaacatcctttttcttcta 17092566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 510
Target Start/End: Original strand, 24296432 - 24296526
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  |||||||| |||||| ||||| ||||||||||  ||||||||||||||| ||   |||||||||||||||| |||||||||| ||||    
T  24296432 tccggcgcggtggccggcggtggcaccaccacgccggagttcaaaactcctccgattc-aattttttttacatttttaaacatcctttttcttcta 24296526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 510
Target Start/End: Original strand, 24310463 - 24310557
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  |||||||| |||||| ||||| ||||||||||  ||||||||||||||| ||   |||||||||||||||| |||||||||| ||||    
T  24310463 tccggcgcggtggccggcggtggcaccaccacgccggagttcaaaactcctccgattc-aattttttttacatttttaaacatcctttttcttcta 24310557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 424 - 478
Target Start/End: Original strand, 5488178 - 5488232
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaac 478  Q
    ||||||||||||||| ||||||||||||||| | ||||||| |||||||||||||    
T  5488178 gtggccggtggtggcaccaccgcgccggagtgtgaaactccgccgattcaaaaac 5488232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 466
Target Start/End: Original strand, 27048678 - 27048729
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctc 466  Q
    |||||||  ||||||||||||||| ||||||||||||||||| |||||||||    
T  27048678 tccggcgcggtggccggtggtggcaccaccgcgccggagtttcaaactcctc 27048729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 466
Target Start/End: Original strand, 27058922 - 27058973
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctc 466  Q
    |||||||  ||||||||||||||| ||||||||||||||||| |||||||||    
T  27058922 tccggcgcggtggccggtggtggcaccaccgcgccggagtttcaaactcctc 27058973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 429 - 510
Target Start/End: Original strand, 13289800 - 13289881
Alignment:
Q  429 cggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    ||||||||||||||||||||||||| |  ||||| ||||||||||||   ||||  || ||||||| |||||||||| ||||    
T  13289800 cggtggtggcgccaccgcgccggagctcaaaacttctccgattcaaatttttttcgcacttttaaacatcctttttcgtcta 13289881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 429 - 510
Target Start/End: Original strand, 13304767 - 13304848
Alignment:
Q  429 cggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    ||||||||||||||||||||||||| |  ||||| ||||||||||||   ||||  || ||||||| |||||||||| ||||    
T  13304767 cggtggtggcgccaccgcgccggagctcaaaacttctccgattcaaatttttttcgcacttttaaacatcctttttcgtcta 13304848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 3692015 - 3691944
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| ||||||||||||   ||||| |||||||||||||  ||||||| ||||||||  ||||||||    
T  3692015 ggtggcgcctccgcgccggagtacgaaactgctccgattcaaaatttttttacgtttttaaacctccttttt 3691944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 13775622 - 13775693
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||| ||||||   ||||||| |||||||| |||||||||    
T  13775622 ggtggcgcctccgcgccggagttcgaaacttctccgtttcaaattttttttacgtttttaaacatccttttt 13775693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 21171139 - 21171068
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||| ||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  21171139 ggtggcgcctccgcgccggaattcgaaacttctccgattcaaattttttttacgtttttaaacatccttttt 21171068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 31540473 - 31540422
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||| ||||||||||||||| |||| ||||||||||||||  ||||||||    
T  31540473 agatgatcttcatcttctccggggaaccttgttcctccggcgtggtggccgg 31540422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Complemental strand, 8729797 - 8729747
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||| |||| ||||||||||  ||||||||    
T  8729797 gatgatcttcatcttctccggtgaagtttgctcctccggcgtggtggccgg 8729747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 18816169 - 18816219
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  18816169 gatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 18816219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 22481363 - 22481413
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccg 430  Q
    ||||||||||||||||||||||||||  |||||| |||||||  |||||||    
T  22481363 agatgaacttcatcttctccggtgaagcttgttcttccggcgcggtggccg 22481413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 27293909 - 27293959
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||| | |||||||||||||||  ||||||||    
T  27293909 gatgatcttcatcttctccggtggagtttgttcctccggcgtggtggccgg 27293959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 27352158 - 27352211
Alignment:
Q  378 ggagatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||| ||||||||||||||| | | |||||||||||||||  ||||||||    
T  27352158 ggagatgatcttcatcttctccggcggagtttgttcctccggcgtggtggccgg 27352211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 27364271 - 27364324
Alignment:
Q  378 ggagatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||| ||||||||||||||| | | |||||||||||||||  ||||||||    
T  27364271 ggagatgatcttcatcttctccggcggagtttgttcctccggcgtggtggccgg 27364324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 27454614 - 27454667
Alignment:
Q  378 ggagatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||| ||||||||||||||| | | |||||||||||||||  ||||||||    
T  27454614 ggagatgatcttcatcttctccggcggagtttgttcctccggcgtggtggccgg 27454667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 30996952 - 30996993
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttt 456  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
T  30996952 tccggcgcggtggccggtggtggcaccaccgcgccggagttt 30996993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 34472489 - 34472530
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcg 421  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  34472489 agatgaacttcatcttctccggtgaaacttgttcctcaggcg 34472530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 12452529 - 12452573
Alignment:
Q  134 atagatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    ||||||||||||||||||||||| | ||||||| |||| ||||||    
T  12452529 atagatctggaccgtctgatgaatctgaaggtccagatttaatca 12452573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 431
Target Start/End: Complemental strand, 12616419 - 12616375
Alignment:
Q  387 cttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||  |||||||||||||||  ||||||||    
T  12616419 cttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 12616375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 22255302 - 22255346
Alignment:
Q  387 cttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||  |||||||||||||||  ||||||||    
T  22255302 cttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 22255346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 33299430 - 33299390
Alignment:
Q  138 atctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    ||||||||||||||||||| | |||||||||| ||||||||    
T  33299430 atctggaccgtctgatgaatcggaaggtctaggtctaatca 33299390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 3e-93; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 415 - 616
Target Start/End: Complemental strand, 28479976 - 28479775
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctctaggtt 514  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  28479976 tccggcgcagtggccggtggtggcgccaccgcgccggagttttaaactcgtccaattcaaaaactttttacatttttaaacatcctttttcctctaggtt 28479877  T
Q  515 acgaaaatcaacttagtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagtactttctacctcttcctctgtctctg 614  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  28479876 acgaaaatcaacttagtttttaaagaaaatgtttgaaaattgctagatctggacttaaagaaaacgaaggaagaactttctacctcttactctgtctctg 28479777  T
Q  615 ct 616  Q
    ||    
T  28479776 ct 28479775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 430 - 616
Target Start/End: Complemental strand, 21150051 - 21149865
Alignment:
Q  430 ggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctctaggttacgaaaatcaactta 529  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  21150051 ggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaagctttttacatttttaaacatcctttttcctctagattacgaaaatcaactta 21149952  T
Q  530 gtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagtactttctacctcttcctctgtctctgct 616  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21149951 gtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagaactttctacctcttcctctgtctctgct 21149865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 473 - 616
Target Start/End: Original strand, 27682593 - 27682736
Alignment:
Q  473 aaaaactttttacatttttaaagatcctttttcctctaggttacgaaaatcaacttagtttttaaagaaaatgtttgaaaaatgctagatctggacttaa 572  Q
    ||||||||| |||||||| | | ||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  27682593 aaaaactttctacattttcagatatccttttttctctagattacgaaaatcaacttagtttttgaagaaaatgtttgaaaaaagctagatcttgacttaa 27682692  T
Q  573 agaaaacgaaggaagtactttctacctcttcctctgtctctgct 616  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  27682693 agaaaatgaaggaagaattttctacctcttcctctgtctctgct 27682736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 415 - 510
Target Start/End: Complemental strand, 39756338 - 39756243
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  |||||||| |||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||| |||||||||| ||||    
T  39756338 tccggcgcggtggccggcggtggcaccaccgcgccggagttcgaaactcctccgattcaaaaactttttacactttcaaatatcctttttcttcta 39756243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 510
Target Start/End: Original strand, 21322006 - 21322101
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  ||||||||||||||| |||||||||||||| |  |||| ||||||||||| |||||||||||| ||||||| |||||||||| ||||    
T  21322006 tccggcgcggtggccggtggtggcaccaccgcgccggaggtcgaaacccctccgattcacaaactttttacacttttaaacatcctttttcttcta 21322101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 510
Target Start/End: Original strand, 27425291 - 27425386
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  |||||||| |||||| ||||||||||||||||  ||||||||||||||||| ||||||||||| ||| ||| |||||||||| ||||    
T  27425291 tccggcgcggtggccggcggtggcaccaccgcgccggagttcgaaactcctccgattcaagaactttttacactttcaaatatcctttttcttcta 27425386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 510
Target Start/End: Original strand, 27440337 - 27440432
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  |||||||| |||||| ||||||||||||||||  ||||||||||||||||| ||||||||||| ||| ||| |||||||||| ||||    
T  27440337 tccggcgcggtggccggcggtggcaccaccgcgccggagttcgaaactcctccgattcaagaactttttacactttcaaatatcctttttcttcta 27440432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 415 - 504
Target Start/End: Original strand, 34543049 - 34543138
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||||  ||||||||||||||| ||||||||||||||| | ||||||| |||||||||||| | ||||| ||||||||  ||||||||    
T  34543049 tccggcgcggtggccggtggtggcaccaccgcgccggagtgtgaaactccgccgattcaaaaattgtttacgtttttaaacctccttttt 34543138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 11647213 - 11647284
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||  ||||||| |||||||| |||||||||    
T  11647213 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaaatttttttacgtttttaaacatccttttt 11647284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 425 - 503
Target Start/End: Original strand, 17686391 - 17686470
Alignment:
Q  425 tggccggtggtggcgccaccgcgccggagttttaaactcctccgattc-aaaaactttttacatttttaaagatcctttt 503  Q
    |||||||||||||| ||||||||||||||||| |||||||||  | || ||||| ||||||| |||||||| ||||||||    
T  17686391 tggccggtggtggcaccaccgcgccggagtttcaaactcctctaaatcaaaaaagtttttacgtttttaaacatcctttt 17686470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 21851541 - 21851591
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcct 465  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  21851541 tccggcgcggtggccggtggtggcaccaccgcgccggagttttaaactcct 21851591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 21859976 - 21860026
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcct 465  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  21859976 tccggcgcggtggccggtggtggcaccaccgcgccggagttttaaactcct 21860026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 415 - 504
Target Start/End: Original strand, 34529075 - 34529165
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgcc-ggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||||  ||||||||||||||| |||||||||| ||||| | ||||||| |||||||||||| | ||||| ||||||||  ||||||||    
T  34529075 tccggcgcggtggccggtggtggcaccaccgcgcccggagtgtgaaactccgccgattcaaaaattgtttacgtttttaaacctccttttt 34529165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 25495125 - 25495081
Alignment:
Q  134 atagatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  25495125 atagatcttgaccgtctgatgaatcagaaggtctagatctaatca 25495081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 3781184 - 3781113
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  3781184 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 3781113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 3793457 - 3793386
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  3793457 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 3793386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 19558158 - 19558087
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  19558158 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 19558087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 21667995 - 21668066
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  21667995 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 21668066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 21682996 - 21683067
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  21682996 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 21683067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 18139998 - 18140039
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcg 421  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  18139998 agatgaacttcatcttctccggtgaaacttgttcctccggcg 18140039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 17686010 - 17686054
Alignment:
Q  134 atagatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    |||||| |||||||||||||||| | |||||||||||||||||||    
T  17686010 atagatatggaccgtctgatgaatccgaaggtctagatctaatca 17686054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 11626004 - 11626075
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||| || |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  11626004 ggtggcacctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 11626075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 16031743 - 16031814
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||| ||||||||   ||||||| |||||||| |||||||||    
T  16031743 ggtggcgcctccgcgccggagttcgaaactgctctgattcaaattttttttacgtttttaaacatccttttt 16031814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 39884494 - 39884443
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||  |||||| |||||||  ||||||||    
T  39884494 agatgaacttcatcttctccggtgaaacttgttcttccggcgtggtggccgg 39884443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 39900070 - 39900019
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||  |||||| |||||||  ||||||||    
T  39900070 agatgaacttcatcttctccggtgaaacttgttcttccggcgtggtggccgg 39900019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 34307532 - 34307582
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  34307532 gatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 34307582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 477
Target Start/End: Complemental strand, 20622489 - 20622436
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaa 477  Q
    ||||||||||||||| ||||||||||||||||  ||  | ||||||||||||||    
T  20622489 gtggccggtggtggcaccaccgcgccggagttcaaacttactccgattcaaaaa 20622436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Complemental strand, 25262633 - 25262592
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttt 456  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
T  25262633 tccggcgcggtggccggtggtggcaccaccgcgccggagttt 25262592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 33308188 - 33308229
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttt 456  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
T  33308188 tccggcgcggtggccggtggtggcaccaccgcgccggagttt 33308229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 504
Target Start/End: Complemental strand, 24044091 - 24044051
Alignment:
Q  464 ctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||||||||||  |||||||||||||||| |||||||||    
T  24044091 ctccgattcaaaatttttttacatttttaaacatccttttt 24044051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 455
Target Start/End: Original strand, 25193117 - 25193149
Alignment:
Q  423 agtggccggtggtggcgccaccgcgccggagtt 455  Q
    |||||||||||||||| ||||||||||||||||    
T  25193117 agtggccggtggtggcaccaccgcgccggagtt 25193149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 151; Significance: 1e-79; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 177 - 470
Target Start/End: Complemental strand, 24771 - 24481
Alignment:
Q  177 caacggttagatcaaagatctaacggcttacaactgaggccggtttaaaagttggttcggttcnnnnnnnnnggatcagaccggttcaaattgagtagta 276  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||||    
T  24771 caaccgttagatcaaagatctaacggcttaaaactgaggccggtttaaaagttggttcggttcaaaaaa---ggatcaaaccggttcaaattgagtagta 24675  T
Q  277 taaaagcatattcctggttttttgtttcatttt-aaacactccactctctctctaaaatattttgctctcccttctctctaaaaattttctggnnnnnnn 375  Q
    |||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||||| |||||||||||||||| |||||||| ||||||            
T  24674 taaaagcatatttctggttttt-gtttcatttttaaacactccattctctctctaaaatgttttgctctcccttctttctaaaaaatttctgaaaaaaag 24576  T
Q  376 ngggagatgaacttcatcttctccggtgaactttgttcctccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgat 470  Q
     ||||||||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||| ||||||| ||||||||| ||| || ||||||    
T  24575 tgggagatgaacttcatcttctccggcgaactttgctcctccggcgcggtggccggtggtggcaccaccgcaccggagtttcaaagtcttccgat 24481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 20238 - 20344
Alignment:
Q  1 ctattataatttttgcagtatattgttagaatggaggccacgaggattgaagcctcaac----tacttgatcatagaatatttgttatgattcaaaccag 96  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||    
T  20238 ctattataatttttgccgcatattgttagaatggaggccacgaggattgaagcctcaactacgtacttgatcatagaatatttgttatgattcaaaccag 20337  T
Q  97 ctatttc 103  Q
    |||||||    
T  20338 ctatttc 20344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 427 - 505
Target Start/End: Original strand, 2518 - 2596
Alignment:
Q  427 gccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttc 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2518 gccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaacatcctttttc 2596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 526 - 616
Target Start/End: Original strand, 1 - 91
Alignment:
Q  526 cttagtttttaaagaaaatgtttgaaaaatgctagatctggacttaaagaaaacgaaggaagtactttctacctcttcctctgtctctgct 616  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| |||| |||||||||||||||||||||||    
T  1 cttagtttttgaagaaaatgtttgaaaaatgctagatctagacttaaagaaaacgaaagaagaacttcctacctcttcctctgtctctgct 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 415 - 510
Target Start/End: Complemental strand, 19556 - 19461
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  |||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  19556 tccggcgcggtggccggcggtggcaccaccgcgccggagttctaaactcctccgattcaaaaactttttacatttttaaacatcctttttcttcta 19461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 36253817 - 36253898
Alignment:
Q  280 aagcatattcct-ggttttttgtttcattttaaacactccactctctctctaaaatattttgctctcccttctctctaaaaat 361  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  36253817 aagcatattccttggtttttcgtttcattttaaacactccactctctctctaaaatgttttgc-ctcccttctctctaaaaat 36253898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 415 - 504
Target Start/End: Original strand, 4838719 - 4838808
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||||  ||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||   |||| |||||||| |||||||||    
T  4838719 tccggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactccgccgattcaaaaacaaattacctttttaaacatccttttt 4838808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 424 - 477
Target Start/End: Complemental strand, 23091593 - 23091540
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaa 477  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  23091593 gtggccggtggtggcaccaccgcgccggagttttaaactcctccgattccaaaa 23091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 15209328 - 15209277
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||  ||||||||||||||  ||||||||    
T  15209328 agatgaacttcatcttctccggtgaaacttgttcctccggcgtggtggccgg 15209277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 503
Target Start/End: Original strand, 26875130 - 26875209
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttt 503  Q
    ||||||||||||||| ||||||||||||||||  ||  | |||||||||||||| || ||  | ||||||| ||||||||    
T  26875130 gtggccggtggtggcaccaccgcgccggagttcaaacttactccgattcaaaaatttcttgtagttttaaacatcctttt 26875209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 477
Target Start/End: Original strand, 36577967 - 36578034
Alignment:
Q  410 gttcctccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaa 477  Q
    |||| |||||||  ||||||||||||||| ||||||||||||||||  ||||||  ||| ||||||||    
T  36577967 gttcttccggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactcaaccgtttcaaaaa 36578034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 504
Target Start/End: Complemental strand, 4836549 - 4836459
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcc-tccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||||  ||||||||||||||| ||||||||||||||||  ||||||| ||| | ||||||| |||| ||  ||||| | |||||||||    
T  4836549 tccggcgtggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 4836459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 504
Target Start/End: Complemental strand, 4841994 - 4841904
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcc-tccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||||  ||||||||||||||| ||||||||||||||||  ||||||| ||| | ||||||| |||| ||  ||||| | |||||||||    
T  4841994 tccggcgtggtggccggtggtggcaccaccgcgccggagttcaaaactccgtccaaatcaaaaagttttcacggttttagacatccttttt 4841904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 504
Target Start/End: Original strand, 12481316 - 12481356
Alignment:
Q  464 ctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||||||||||| |||||||||||| ||| |||||||||    
T  12481316 ctccgattcaaaaattttttacattttcaaacatccttttt 12481356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 17974961 - 17974921
Alignment:
Q  138 atctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    ||||||||||| ||||||| | |||||||||||||||||||    
T  17974961 atctggaccgtatgatgaatcggaaggtctagatctaatca 17974921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 504
Target Start/End: Complemental strand, 21925634 - 21925594
Alignment:
Q  464 ctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||||||||||  |||||||||||||||| |||||||||    
T  21925634 ctccgattcaaaatttttttacatttttaaacatccttttt 21925594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 455
Target Start/End: Original strand, 26872663 - 26872703
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagtt 455  Q
    |||||||  ||||||||||||||| ||||||||||||||||    
T  26872663 tccggcgcggtggccggtggtggcaccaccgcgccggagtt 26872703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 7e-23; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 415 - 510
Target Start/End: Complemental strand, 4185224 - 4185129
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  |||||||| |||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||| |||||||||| ||||    
T  4185224 tccggcgcggtggccggcggtggcaccaccgcgccggagttcgaaactcctccgattcaaaaactttttacactttcaaatatcctttttcttcta 4185129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 18538053 - 18537982
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||||||||| ||||| || |||||||||    
T  18538053 ggtggcgcctccgcgccggagttcgaaacttctccgattcaaaaactttttacgtttttgaacatccttttt 18537982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 18548561 - 18548490
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||||||||| ||||| || |||||||||    
T  18548561 ggtggcgcctccgcgccggagttcgaaacttctccgattcaaaaactttttacgtttttgaacatccttttt 18548490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 5167787 - 5167716
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||||||||| |||||  | |||||||||    
T  5167787 ggtggcgcctccgcgccggagttcgaaacttctccgattcaaaaactttttacgtttttggacatccttttt 5167716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 471
Target Start/End: Complemental strand, 38411826 - 38411770
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgatt 471  Q
    |||||||  ||||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  38411826 tccggcgcggtggccggtggtggcaccaccgcgccggagtttcaaacttctccgatt 38411770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 3057074 - 3057145
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  3057074 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 3057145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 4197898 - 4197827
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  4197898 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 4197827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 4208733 - 4208662
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  4208733 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 4208662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 5803153 - 5803204
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||  ||||||||||||||  ||||||||    
T  5803153 agatgaacttcatcttctccggtgaaacttgttcctccggcgtggtggccgg 5803204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 9614501 - 9614430
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  9614501 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 9614430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 13737317 - 13737388
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||||||||||||||| |  ||||| |||||||||||||  ||||| || ||||||| |||||||||    
T  13737317 ggtggcgccaccgcgccggagctcaaaacttctccgattcaaaatttttttgcacttttaaacatccttttt 13737388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 15853229 - 15853178
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||| ||||||||||||||||||| |||||||||||||||  ||||||||    
T  15853229 agatgatcttcatcttctccggtgaagtttgttcctccggcgtggtggccgg 15853178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 424 - 467
Target Start/End: Original strand, 16474429 - 16474472
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcctcc 467  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||    
T  16474429 gtggccgatggtggcaccaccgcgccggagttttaaactcctcc 16474472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 466
Target Start/End: Original strand, 17515793 - 17515844
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctc 466  Q
    |||||||  ||||||||||||||| ||||||||||||||||| |||||||||    
T  17515793 tccggcgcggtggccggtggtggcaccaccgcgccggagtttcaaactcctc 17515844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 466
Target Start/End: Complemental strand, 17537421 - 17537370
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctc 466  Q
    |||||||  ||||||||||||||| ||||||||||||||||| |||||||||    
T  17537421 tccggcgcggtggccggtggtggcaccaccgcgccggagtttcaaactcctc 17537370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 25728540 - 25728583
Alignment:
Q  135 tagatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  25728540 tagatctggatcgtctgatgaatcagaaggtctagatctaatca 25728583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 39993157 - 39993227
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||| |||| ||||||| |||||||| |||||||||    
T  39993157 ggtggcgcctccgcgccggagttcgaaacttctccgattc-aaaattttttacgtttttaaacatccttttt 39993227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 559895 - 559937
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcctc 466  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  559895 gtggccggtggtggcaccaccgcgccggagtttcaaactcctc 559937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 466
Target Start/End: Original strand, 569804 - 569846
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcctc 466  Q
    ||||||||||||||| ||||||||||||||||| |||||||||    
T  569804 gtggccggtggtggcaccaccgcgccggagtttcaaactcctc 569846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 22833824 - 22833896
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattc-aaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| || |||||| ||||||||||||| ||||| || |||||||||    
T  22833824 ggtggcgcctccgcgccggagttcgaaacttcttcgattcaaaaaactttttacgtttttgaacatccttttt 22833896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 15478448 - 15478397
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||||||||||||||||||||  ||||||||| |||||  ||||||||    
T  15478448 agatgaacttcatcttctccggtgaggtttgttccttcggcgtggtggccgg 15478397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 16742156 - 16742227
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   |||| || |||||||| |||||||||    
T  16742156 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaatttttttcacgtttttaaacatccttttt 16742227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 17517980 - 17517909
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   |||| || |||||||| |||||||||    
T  17517980 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaatttttttcacgtttttaaacatccttttt 17517909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 17535234 - 17535305
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   |||| || |||||||| |||||||||    
T  17535234 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaatttttttcacgtttttaaacatccttttt 17535305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 31555088 - 31555159
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   |||| || |||||||| |||||||||    
T  31555088 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaatttttttcacgtttttaaacatccttttt 31555159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 31570077 - 31570148
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   |||| || |||||||| |||||||||    
T  31570077 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaatttttttcacgtttttaaacatccttttt 31570148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 6223945 - 6223995
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  6223945 gatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 6223995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 431
Target Start/End: Complemental strand, 7368170 - 7368116
Alignment:
Q  377 gggagatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||| |||| ||| |||||| |||  ||||||||    
T  7368170 gggagatgaacttcatcttctccggcgaaccttgctcctccagcgcggtggccgg 7368116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 18460645 - 18460695
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  18460645 gatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 18460695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 5200602 - 5200643
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttt 456  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
T  5200602 tccggcgcggtggccggtggtggcaccaccgcgccggagttt 5200643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 5209731 - 5209772
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttt 456  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
T  5209731 tccggcgcggtggccggtggtggcaccaccgcgccggagttt 5209772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 464
Target Start/End: Complemental strand, 15974784 - 15974735
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcc 464  Q
    |||||||  ||||||||||||||| ||||||||||||||||  |||||||    
T  15974784 tccggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactcc 15974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 27967389 - 27967430
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttt 456  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
T  27967389 tccggcgcggtggccggtggtggcaccaccgcgccggagttt 27967430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 27976842 - 27976883
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttt 456  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
T  27976842 tccggcgcggtggccggtggtggcaccaccgcgccggagttt 27976883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 7e-23; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 415 - 510
Target Start/End: Complemental strand, 18597137 - 18597042
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    |||||||  |||||||| |||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||| |||||||||| ||||    
T  18597137 tccggcgcggtggccggcggtggcaccaccgcgccggagttcgaaactcctccgattcaaaaactttttacactttcaaatatcctttttcttcta 18597042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 28459120 - 28459076
Alignment:
Q  134 atagatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  28459120 atagatctggaccgtctgatgaatcagaaggtctagatctaatca 28459076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 16404627 - 16404576
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||||||||||||||||||||| |||||||||||||||  ||||||||    
T  16404627 agatgaacttcatcttctccggtgaagtttgttcctccggcgtggtggccgg 16404576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 51634081 - 51634010
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  51634081 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 51634010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 51647520 - 51647449
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  51647520 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 51647449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 465
Target Start/End: Complemental strand, 18750246 - 18750196
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcct 465  Q
    |||||||  ||||||||||||||| ||||||||||||||||| ||||||||    
T  18750246 tccggcgcggtggccggtggtggcaccaccgcgccggagtttcaaactcct 18750196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 483
Target Start/End: Complemental strand, 13463876 - 13463808
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaacttttt 483  Q
    |||||||  ||||||||||||||| ||||||||||||||||  ||||||  ||| ||||||| ||||||    
T  13463876 tccggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactcaaccgtttcaaaatcttttt 13463808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 420
Target Start/End: Original strand, 20344551 - 20344591
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggc 420  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  20344551 agatgatcttcatcttctccggtgaagtttgttcctccggc 20344591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 21888132 - 21888183
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  21888132 agatgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 21888183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 41745550 - 41745592
Alignment:
Q  136 agatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  41745550 agatctggaccgttcgatgaatcagaaggtctagatctaatca 41745592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 504
Target Start/End: Original strand, 179835 - 179915
Alignment:
Q  425 tggccggtggtggcgccaccgcgccggagttttaaactcc-tccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||||||||||| ||||||||||||||||  ||||||| ||| | ||||||| |||| ||  ||||| | |||||||||    
T  179835 tggccggtggtggcaccaccgcgccggagttcaaaactccatccaaatcaaaaagttttcacggttttagacatccttttt 179915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 421
Target Start/End: Complemental strand, 21085097 - 21085057
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcg 421  Q
    ||||| ||||||||||||||||||  |||||||||||||||    
T  21085097 gatgatcttcatcttctccggtgaggtttgttcctccggcg 21085057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 7e-20; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 414 - 504
Target Start/End: Complemental strand, 29189295 - 29189205
Alignment:
Q  414 ctccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||  ||||||||||||||| |||||||||| |||||  ||||  |||||||||| |||||||||||||||||||| |||||||||    
T  29189295 ctccggcgcggtggccggtggtggcaccaccgcgcctgagttcaaaaccactccgattcacaaactttttacatttttaaacatccttttt 29189205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 41669320 - 41669249
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||||||||| ||||| || |||||||||    
T  41669320 ggtggcgcctccgcgccggagttcaaaacttctccgattcaaaaactttttacgtttttgaacatccttttt 41669249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 41684127 - 41684056
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||||||||| ||||| || |||||||||    
T  41684127 ggtggcgcctccgcgccggagttcaaaacttctccgattcaaaaactttttacgtttttgaacatccttttt 41684056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 31412143 - 31412099
Alignment:
Q  134 atagatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  31412143 atagatctggaccgtctgatgaatcagaaggtctagatctaatca 31412099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 31549536 - 31549586
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcct 465  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  31549536 tccggcgcggtggccggtggtggcaccaccgcgccggagttttaaactcct 31549586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 471
Target Start/End: Original strand, 29185269 - 29185325
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgatt 471  Q
    |||||||  ||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  29185269 tccggcgcggtggccggtggtggcaccaccgtgccggagtttcaaactcctccgatt 29185325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 8656225 - 8656296
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||| ||||| |||||||||| |   ||||||| |||||||| |||||||||    
T  8656225 ggtggcgcctccgcgccggagtttgaaactgctccgattcacattttttttacgtttttaaacatccttttt 8656296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 8671199 - 8671270
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||| ||||| |||||||||| |   ||||||| |||||||| |||||||||    
T  8671199 ggtggcgcctccgcgccggagtttgaaactgctccgattcacattttttttacgtttttaaacatccttttt 8671270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 24693939 - 24694010
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||||||||||||||| |  ||||| |||||||||||||  ||||| || ||||||| |||||||||    
T  24693939 ggtggcgccaccgcgccggagctcaaaacttctccgattcaaaatttttttgcacttttaaacatccttttt 24694010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 37349329 - 37349400
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  37349329 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 37349400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 37364378 - 37364449
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||   ||||||| |||||||| |||||||||    
T  37364378 ggtggcgcctccgcgccggagttcgaaactgctccgattcaaattttttttacgtttttaaacatccttttt 37364449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 21930741 - 21930701
Alignment:
Q  138 atctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  21930741 atctagaccgtctgatgaatcagaaggtctagatctaatca 21930701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 3942838 - 3942787
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||  |||||||| |||||  ||||||||    
T  3942838 agatgaacttcatcttctccggtgaaacttgttccttcggcgtggtggccgg 3942787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 16681593 - 16681542
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||| ||||||||||||||| ||| |||||||||||||||  ||||||||    
T  16681593 agatgatcttcatcttctccggggaaatttgttcctccggcgtggtggccgg 16681542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Complemental strand, 24611557 - 24611486
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||||||||||||||| |  ||||| ||||||||||||   ||||| || ||||||| |||||||||    
T  24611557 ggtggcgccaccgcgccggagctcaaaacttctccgattcaaattttttttgcacttttaaacatccttttt 24611486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 24613233 - 24613284
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  24613233 agatgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 24613284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 24672861 - 24672912
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  24672861 agatgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 24672912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 24709635 - 24709686
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  24709635 agatgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 24709686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 24742629 - 24742680
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  24742629 agatgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 24742680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 24755399 - 24755450
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  24755399 agatgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 24755450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 24946497 - 24946446
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  24946497 agatgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 24946446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 24979362 - 24979311
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  24979362 agatgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 24979311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 34494696 - 34494747
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  34494696 agatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 34494747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 572022 - 572072
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  572022 gatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 572072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Complemental strand, 11544720 - 11544670
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  11544720 gatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 11544670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Complemental strand, 11558779 - 11558729
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  11558779 gatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 11558729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 18062783 - 18062833
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  18062783 gatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 18062833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 464
Target Start/End: Complemental strand, 2826906 - 2826865
Alignment:
Q  423 agtggccggtggtggcgccaccgcgccggagttttaaactcc 464  Q
    |||||||||||||||| ||||||||||||||||  |||||||    
T  2826906 agtggccggtggtggcaccaccgcgccggagttcaaaactcc 2826865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 505
Target Start/End: Original strand, 18381207 - 18381248
Alignment:
Q  464 ctccgattcaaaaactttttacatttttaaagatcctttttc 505  Q
    |||||||||||||| ||||||| |||||||| ||||||||||    
T  18381207 ctccgattcaaaaaatttttacgtttttaaacatcctttttc 18381248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 505
Target Start/End: Complemental strand, 34610925 - 34610884
Alignment:
Q  464 ctccgattcaaaaactttttacatttttaaagatcctttttc 505  Q
    |||||||||||||| ||||||| |||||||| ||||||||||    
T  34610925 ctccgattcaaaaattttttacgtttttaaacatcctttttc 34610884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 505
Target Start/End: Complemental strand, 34626042 - 34626001
Alignment:
Q  464 ctccgattcaaaaactttttacatttttaaagatcctttttc 505  Q
    |||||||||||||| ||||||| |||||||| ||||||||||    
T  34626042 ctccgattcaaaaaatttttacgtttttaaacatcctttttc 34626001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 424 - 508
Target Start/End: Original strand, 6043 - 6127
Alignment:
Q  424 gtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctc 508  Q
    ||||||||||||||| |||||| |||||||||  |||| | ||||||||| |||||||||||| ||||||| |||||||||||||    
T  6043 gtggccggtggtggcaccaccgtgccggagttcgaaacccttccgattcacaaactttttacaattttaaacatcctttttcctc 6127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 415 - 504
Target Start/End: Complemental strand, 15557 - 15468
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||| || || ||| ||||||||| |||||||||||||  ||||| |||||||||||||||||||||| ||||| || |||||||||    
T  15557 tccggcgcagcggacggcggtggcgcctccgcgccggagttcgaaacttctccgattcaaaaactttttacgtttttgaacatccttttt 15468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2066 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold2066
Description:

Target: scaffold2066; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 826 - 897
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||||||||| ||||| || |||||||||    
T  826 ggtggcgcctccgcgccggagttcgaaacttctccgattcaaaaactttttacgtttttgaacatccttttt 897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 19122 - 19079
Alignment:
Q  135 tagatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19122 tagatctggaccgtctgatgaaacagaaggtctagatctaatca 19079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 440 - 510
Target Start/End: Complemental strand, 4286 - 4216
Alignment:
Q  440 ccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttcctcta 510  Q
    ||||||||||||||||  ||||||||||||||||||    ||||||||||||||| |||||||||| ||||    
T  4286 ccaccgcgccggagttcgaaactcctccgattcaaatttgttttacatttttaaacatcctttttcttcta 4216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1120 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 499
Target Start/End: Complemental strand, 436 - 351
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattc-aaaaactttttacatttttaaagatcc 499  Q
    |||||||  ||||||||||||||| ||||||||||||||||| |||||||||  | || ||||| ||||||| |||||||| ||||    
T  436 tccggcgcggtggccggtggtggcaccaccgcgccggagtttcaaactcctctaaatcaaaaaagtttttacgtttttaaacatcc 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 9743 - 9699
Alignment:
Q  134 atagatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    |||||||||||| |||||||||| |||||||||||||||||||||    
T  9743 atagatctggacagtctgatgaatcagaaggtctagatctaatca 9699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 771 - 720
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||| ||||||||||||||||||| |||||||||||||||  ||||||||    
T  771 agatgatcttcatcttctccggtgaagtttgttcctccggcgtggtggccgg 720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 21693 - 21744
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||  ||||||||||||||  ||||||||    
T  21693 agatgaacttcatcttctccggtgaaacttgttcctccggcgtggtggccgg 21744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 21709 - 21658
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||||||||||||||||||||  |||||||||||||||  ||||||||    
T  21709 agatgaacttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 21658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 168 - 219
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||| ||||||||||||||||||| |||||||||||||||  ||||||||    
T  168 agatgatcttcatcttctccggtgaagtttgttcctccggcgtggtggccgg 219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 51135 - 51186
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||||||||||||||||||||  |||||||||||||||  ||||||||    
T  51135 agatgaacttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 51186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 39483 - 39525
Alignment:
Q  134 atagatctggaccgtctgatgaaacagaaggtctagatctaat 176  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  39483 atagatcttgaccgtctgatgaatcagaaggtctagatctaat 39525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 505
Target Start/End: Original strand, 64674 - 64764
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttttc 505  Q
    |||||||  |||| || ||||||| ||||||||||||||||| || ||||||  | ||||||| | ||||| |||||||| ||||||||||    
T  64674 tccggcgcggtggtcgttggtggcaccaccgcgccggagtttcaacctcctctaaatcaaaaattgtttacgtttttaaacatcctttttc 64764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 178
Target Start/End: Original strand, 64306 - 64348
Alignment:
Q  136 agatctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    |||||||||||||  |||||| |||||||||||||||||||||    
T  64306 agatctggaccgttcgatgaatcagaaggtctagatctaatca 64348  T

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Target: scaffold1896 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold1896
Description:

Target: scaffold1896; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 880 - 840
Alignment:
Q  138 atctggaccgtctgatgaaacagaaggtctagatctaatca 178  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  880 atctggaccgtctgatgaatcggaaggtctagatctaatca 840  T

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Target: scaffold1896; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 415 - 503
Target Start/End: Complemental strand, 481 - 393
Alignment:
Q  415 tccggcggagtggccggtggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatcctttt 503  Q
    |||||||  ||||||||| ||||| ||||||||||||||||  ||  | |||||||||||||| || ||  | ||||||| ||||||||    
T  481 tccggcgcggtggccggtagtggcaccaccgcgccggagttcaaacttgctccgattcaaaaatttcttgtagttttaaacatcctttt 393  T

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Target: scaffold0260 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 420
Target Start/End: Original strand, 6874 - 6914
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggc 420  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  6874 agatgatcttcatcttctccggtgaagtttgttcctccggc 6914  T

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Target: scaffold0362 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 504
Target Start/End: Original strand, 17543 - 17614
Alignment:
Q  433 ggtggcgccaccgcgccggagttttaaactcctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    ||||||||| |||||||||||||  ||||| ||||| ||||||   ||||||| |||||||| |||||||||    
T  17543 ggtggcgcctccgcgccggagttcgaaacttctccgtttcaaattttttttacgtttttaaacatccttttt 17614  T

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Target: scaffold0055 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 8430 - 8481
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  8430 agatgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 8481  T

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Target: scaffold0052 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 76105 - 76054
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  76105 agatgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 76054  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 60400 - 60349
Alignment:
Q  380 agatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||||||||||||||||||||||||| ||| | ||||||||  ||||||||    
T  60400 agatgaacttcatcttctccggtgaaccttgcttctccggcgtggtggccgg 60349  T

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Target: scaffold1942 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1942
Description:

Target: scaffold1942; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 431
Target Start/End: Complemental strand, 329 - 279
Alignment:
Q  381 gatgaacttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||||||  ||||||||    
T  329 gatgatcttcatcttctccggtgaggtttgttcctccggcgtggtggccgg 279  T

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Target: scaffold1376 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1376
Description:

Target: scaffold1376; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 504
Target Start/End: Complemental strand, 1017 - 977
Alignment:
Q  464 ctccgattcaaaaactttttacatttttaaagatccttttt 504  Q
    |||||||||||||| |||||||||||| ||| |||||||||    
T  1017 ctccgattcaaaaattttttacattttcaaacatccttttt 977  T

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Target: scaffold0156 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 340 - 368
Target Start/End: Original strand, 34178 - 34206
Alignment:
Q  340 gctctcccttctctctaaaaattttctgg 368  Q
    |||||||||||||||||||||||||||||    
T  34178 gctctcccttctctctaaaaattttctgg 34206  T

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Target: scaffold0061 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 431
Target Start/End: Original strand, 33045 - 33089
Alignment:
Q  387 cttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||    
T  33045 cttcatcttctccggtgaagcttgttcctccggcgtggtggccgg 33089  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 431
Target Start/End: Complemental strand, 165746 - 165702
Alignment:
Q  387 cttcatcttctccggtgaactttgttcctccggcggagtggccgg 431  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||    
T  165746 cttcatcttctccggtgaagcttgttcctccggcgtggtggccgg 165702  T

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