View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7801_low_6 (Length: 613)
Name: NF7801_low_6
Description: NF7801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7801_low_6 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 510; Significance: 0; HSPs: 21)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 9 - 598
Target Start/End: Original strand, 2096948 - 2097542
Alignment:
| Q |
9 |
tttggtgttcagattaaacctcactgaaatatcaaaatgtaattcaaagcatgctctttcaaacaacctttattgcttttgcatacaaaggaaactctta |
108 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
2096948 |
tttggtgttcagattaaacctcactgaaatatcaaaatgtaattcaaagcacactctttcaaacaacctttattgcttttacatagaaaggaaactctta |
2097047 |
T |
|
| Q |
109 |
--gaatgcaattacaagaacagaaggaaactaagacaaatattggactaatatgtttattgctttggactcacatgacccttttaagctataacataaaa |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2097048 |
cagaatgcaattacaagaacagaaggaaactaagacaaatattggactaatatgtttattgctttggactcacatgacccttttaagctataacataaaa |
2097147 |
T |
|
| Q |
207 |
acaactcactaatgtctcttaaaaatcttattaagaaataatgtaaatgaaacgccaaggtaatctctacaccattcaaatacctgcggaaagtaagtgt |
306 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2097148 |
acaactcactaatgtctcttaaaaatcttattaagaaataatgtaaatgaaacgccaaggtaatctctacaccattcaaatacctgcggaaagtaagtgt |
2097247 |
T |
|
| Q |
307 |
ttcccaatgcaaatccagcaacaagtccaccgccatatccaatcagaagaactgtccagtataattcaaagaaagattctgagttg---tcatcatcacc |
403 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||||||||| | |
|
|
| T |
2097248 |
ttcccaatgcaactccagcaacaagtccaccgccatatccaatcagaacaactgtccagtataattcaaagaatgattctgagtcgtcatcatcatcatc |
2097347 |
T |
|
| Q |
404 |
atcagaagtagaaggccctgcatgatctatacacttcttcaacaactgatccccacacaaaccttggttaccctcaaatgaatcatctttgaatgtggaa |
503 |
Q |
| |
|
|||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2097348 |
atcaaaagtcgaaggccctgcatgatctatacacttcttcaccaattgatccccacacagaccttggttaccctcaaatgaatcatctttgaatgtggaa |
2097447 |
T |
|
| Q |
504 |
aactgattattttgtggtataggacctgtgagattgttaaaggacacatttaagtactccaaaaaggtgatttctgccaactgttggggaatttt |
598 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2097448 |
aactgattattttgtggtataggacctgtgagattgttaaaggacacatttaagtactccaaaaaggtgatttctgccaactgtttgggaatttt |
2097542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 143 - 598
Target Start/End: Original strand, 2124457 - 2124912
Alignment:
| Q |
143 |
aaatattggactaatatgtttattgctttggactcacatgacccttttaagctataacataaaaacaactcactaatgtctcttaaaaatcttattaaga |
242 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2124457 |
aaatattggactaatatgtttattgctttggactcatatgacccttttaagctataacataaaaacaactcactaatgtctcttaaaaatcttattaaga |
2124556 |
T |
|
| Q |
243 |
aataatgtaaatgaaacgccaaggtaatctctacaccattcaaatacctgcggaaagtaagtgtttcccaatgcaaatccagcaacaagtccaccgccat |
342 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2124557 |
aataatgtaaatgaaacgccaaggtaatctctacaccattcaaatacctgcggaaagtaagtgtttcccaatgcaaatccagcaacaagtccaccgccat |
2124656 |
T |
|
| Q |
343 |
atccaatcagaagaactgtccagtataattcaaagaaagattctgagttgtcatcatcaccatcagaagtagaaggccctgcatgatctatacacttctt |
442 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
2124657 |
atccaatcagaagaacagtccagtctaattcaaagaaagattccgagtcgtcatcatcaacatcagaagtagaaggccctccatgatctatacacttctt |
2124756 |
T |
|
| Q |
443 |
caacaactgatccccacacaaaccttggttaccctcaaatgaatcatctttgaatgtggaaaactgattattttgtggtataggacctgtgagattgtta |
542 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2124757 |
caacaactgatccccatacaaaccttggttaccctcaaatgaatcatctttgaatgtagaaaactgattattttgtggtataggacctgtgagattgtta |
2124856 |
T |
|
| Q |
543 |
aaggacacatttaagtactccaaaaaggtgatttctgccaactgttggggaatttt |
598 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2124857 |
aaggacacatttaagtactccaaaaaggtgatttctgccaactgttggggaatttt |
2124912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 49 - 598
Target Start/End: Original strand, 2103271 - 2103839
Alignment:
| Q |
49 |
aattcaaagcatgctctttcaaacaacctttattgcttttgcatacaaaggaaactcttagaat--gcaattacaagaacagaaggaaactaagacaaat |
146 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
2103271 |
aattcaaagcacgctctttcgaacaacctttattgcttttacatacaaaggaaactcttacaatatgcaattacaagaacagaaggaaactaaaacaaat |
2103370 |
T |
|
| Q |
147 |
att--------------ggactaatatgtttattgctttggactcacatgacccttttaagctataacataaaaacaactcactaatgtctcttaaaaat |
232 |
Q |
| |
|
| |||||||||| |||||||| || |||||||| ||||||||||| | ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2103371 |
aagaacataaatagagaggactaatatctttattgcattcgactcacaagacccttttaaaccataacataaaaacaactcattaatgtctcttaaaaat |
2103470 |
T |
|
| Q |
233 |
cttattaagaaataatgtaaatgaaacgccaaggtaatctctacaccattcaaatacctgcggaaagtaagtgtttcccaatgcaaatccagcaacaagt |
332 |
Q |
| |
|
|||||||| || | | ||| |||||||| |||| |||||||| ||||| ||||||||||| |||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
2103471 |
cttattaaccaaaattataactgaaacgctaaggcaatctctataccatgcaaatacctgcagaaagtaagtgtttcccaatgccactccagcaacaagt |
2103570 |
T |
|
| Q |
333 |
ccaccgccatatccaatcagaagaactgtccagtataattcaaagaaagattctgagttgtcatcatcaccatc---agaagtagaaggccctgcatgat |
429 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| |||||||||| |||| ||||||||||||||||||| ||| |
|
|
| T |
2103571 |
ccaccgccatatccaatcagaactactgtccagtataattcaatgaaagattttgagtcgtcatcatcatcatcatcagaagtagaaggccctgcaggat |
2103670 |
T |
|
| Q |
430 |
ctatacacttcttcaacaactgatccccacacaaaccttggttaccctcaaatgaatcatctttgaatgtggaaaactgattattttgtggtataggacc |
529 |
Q |
| |
|
||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
2103671 |
ctatacacttctttaacagctgatccccacacagaccttggttaccctcaaatgaatcacctttgaatgtagaaaactgattattttgtggtataggacc |
2103770 |
T |
|
| Q |
530 |
tgtgagattgttaaaggacacatttaagtactccaaaaaggtgatttctgccaactgttggggaatttt |
598 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2103771 |
tgtgagattgttaaaggacacatttaagtactccaaaaaggtgatttctgccaactgttcgggaatttt |
2103839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 52 - 598
Target Start/End: Complemental strand, 2247531 - 2246962
Alignment:
| Q |
52 |
tcaaagcatgctctttcaaacaacctttattgcttttgcatacaaaggaaactcttagaa--tgcaattacaagaacagaaggaaactaagacaaata-- |
147 |
Q |
| |
|
|||||| ||||| |||| ||||||||| || |||||| ||| ||||||||||||||| || || ||||||||||||||||||||||||| ||||||| |
|
|
| T |
2247531 |
tcaaaggatgctttttccaacaaccttaatggcttttacatgcaaaggaaactcttacaaaatgaaattacaagaacagaaggaaactaaaacaaataag |
2247432 |
T |
|
| Q |
148 |
---------ttgg----actaatatgtttattgctttggactcacatgacccttttaagctataacataaaaacaactcactaatgtctcttaaaaatct |
234 |
Q |
| |
|
| || |||||||||||||||||| |||||||||| || |||||||| ||||||||||| |||||| ||||| |||| |||||||| |
|
|
| T |
2247431 |
aaccataaatagggagaactaatatgtttattgctatggactcacaatactattttaagccataacataaaagcaactcgttaatgcctctcaaaaatct |
2247332 |
T |
|
| Q |
235 |
tattaagaaataatgtaaatgaaacgccaaggtaatctctacaccattcaaatacctgcggaaagtaagtgtttcccaatgcaaatccagcaacaagtcc |
334 |
Q |
| |
|
||||||| || | | ||| |||||||| |||| |||||||||||||| |||||||||| |||||||||||| |||||||||||| |||||||||||| || |
|
|
| T |
2247331 |
tattaagcaaaattataactgaaacgctaaggcaatctctacaccatgcaaatacctgtggaaagtaagtgcttcccaatgcaactccagcaacaaggcc |
2247232 |
T |
|
| Q |
335 |
accgccatatccaatcagaagaactgtccagtataattcaaagaaagattctgagttgtc------atcatcaccatcagaagtagaaggccctgcatga |
428 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
2247231 |
gccgctatatccaatcagaactactgtccagtataattcaacgaaagattctgagttgtcgtcatcatcatcatcatcagaagtagaaggccctgcatga |
2247132 |
T |
|
| Q |
429 |
tctatacacttcttcaacaactgatccccacacaaaccttggttaccctcaaatgaatcatctttgaatgtggaaaactgattattttgtggtataggac |
528 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| || ||||||||||| |
|
|
| T |
2247131 |
tctatacatttcttcaataactgatccccacacaaaccttggttaccctcaaatgaatcacctttgaatgtagaaaactgattatgttctggtataggac |
2247032 |
T |
|
| Q |
529 |
ctgtgagattgttaaaggacacatttaagtactccaaaaaggtgatttctgccaactgttggggaatttt |
598 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
2247031 |
ctgtgagattgttaaaagacacatttaagtattccaaaaaggtgatttgtgccaactgttggggtatttt |
2246962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 198 - 598
Target Start/End: Original strand, 2071435 - 2071838
Alignment:
| Q |
198 |
aacataaaaacaactcactaatgtctcttaaaaatcttattaagaaataatgtaaatgaaacgccaaggtaatctctacaccattcaaatacctgcggaa |
297 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| || | | ||| |||||||| |||| |||||||| ||||| ||||||||||| ||| |
|
|
| T |
2071435 |
aacataaaaacaactcactaatgtctcttaaaaatcttattaagcaaaattataactgaaacgctaaggcaatctctataccatgcaaatacctgcagaa |
2071534 |
T |
|
| Q |
298 |
agtaagtgtttcccaatgcaaatccagcaacaagtccaccgccatatccaatcagaagaactgtccagtataattcaaagaaagattctgagttgtcatc |
397 |
Q |
| |
|
||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||| || |||| |||||| |
|
|
| T |
2071535 |
agtaactgtttcccaatgcaactccagcaacaagtccaccaccatatccaatcagaactactgtccagtataactcaaagaaagaatccgagtcgtcatc |
2071634 |
T |
|
| Q |
398 |
atcaccatca---gaagtagaaggccctgcatgatctatacacttcttcaacaactgatccccacacaaaccttggttaccctcaaatgaatcatctttg |
494 |
Q |
| |
|
|||| || || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2071635 |
atcatcaacatcggaagtagaaggccctgcatgatctatacacttcttcaccaactgatccccacacaaaccttggttaccctcaaatgaatcacctttg |
2071734 |
T |
|
| Q |
495 |
aatgtggaaaactgattattttgtggtataggacctgtgagattgttaaaggacacatttaagtactccaaaaaggtgatttctgccaactgttggggaa |
594 |
Q |
| |
|
|| || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||| |
|
|
| T |
2071735 |
aacgtagaaaactgattattttgtggtattggacccgtgagattgttaaaggacacatttaagaattccaaaaaggtgatttgtgccaactgttggggaa |
2071834 |
T |
|
| Q |
595 |
tttt |
598 |
Q |
| |
|
|||| |
|
|
| T |
2071835 |
tttt |
2071838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 196 - 598
Target Start/End: Complemental strand, 2693554 - 2693149
Alignment:
| Q |
196 |
ataacataaaaacaactcactaatgtctcttaaaaatcttattaagaaataatgtaaatgaaacgccaaggtaatctctacaccattcaaatacctgcgg |
295 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||| |||||||| |||| |||||||||||||| |||||||||| || |
|
|
| T |
2693554 |
ataacataaaaacaattcattaatgtctcttaaaaatcttattaagaaatatcataactgaaacgctaaggcaatctctacaccatgcaaatacctgtgg |
2693455 |
T |
|
| Q |
296 |
aaagtaagtgtttcccaatgcaaatccagcaacaagtccaccgccatatccaatcagaagaactgtccagtataattcaaagaaagatt---ctgagttg |
392 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||||| ||||| ||||| || | ||||||||||||||||||||||| ||| |||||| | |
|
|
| T |
2693454 |
aaagtaagtgtttcccaatgcaacaccagcaacaaatccacctccatacccaataagcactactgtccagtataattcaaagaacgatgatcctgagtcg |
2693355 |
T |
|
| Q |
393 |
tcatcatcaccatcagaagtagaaggccctgcatgatctatacacttcttcaacaactgatccccacacaaaccttggttaccctcaaatgaatcatctt |
492 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||| ||| |
|
|
| T |
2693354 |
tcctcatcatcatcagaagtagaaggccctgcaggatctatacacttctttaacagctgatccccacacagaccttggttaccctcaaatgaatcacctt |
2693255 |
T |
|
| Q |
493 |
tgaatgtggaaaactgattattttgtggtataggacctgtgagattgttaaaggacacatttaagtactccaaaaaggtgatttctgccaactgttgggg |
592 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
2693254 |
tgaatgtagaaaactgattattttgtggtataggacctctgagtttattaaaggacacatttaagtactccaaaaaggtgatttcagccaactgttgtgg |
2693155 |
T |
|
| Q |
593 |
aatttt |
598 |
Q |
| |
|
|||||| |
|
|
| T |
2693154 |
aatttt |
2693149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 194 - 594
Target Start/End: Original strand, 2055033 - 2055436
Alignment:
| Q |
194 |
ctataacataaaaacaactcactaatgtctcttaaaaatcttattaagaaataatgtaaatgaaacgccaaggtaatctctacaccattcaaatacctgc |
293 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| || | | ||| |||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
2055033 |
ctataacataaaaacaactcattaatgtctcttaaaaatcttattaagcaaaattataactgaaacgctaaggcaatctctacaccatgcaaatacctgg |
2055132 |
T |
|
| Q |
294 |
ggaaagtaagtgtttcccaatgcaaatccagcaacaagtccaccgccatatccaatcagaagaactgtccagtataattcaaagaaagatt---ctgagt |
390 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| |||||| |
|
|
| T |
2055133 |
agaaagtaagtgtttcccaatgccactccagcatcaagtccaccgccatatccaatcagaactactgtccaatataattcaaagaacgatgatcctgagt |
2055232 |
T |
|
| Q |
391 |
tgtcatcatcaccatcagaagtagaaggccctgcatgatctatacacttcttcaacaactgatccccacacaaaccttggttaccctcaaatgaatcatc |
490 |
Q |
| |
|
||| || ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||| ||||||||||| || ||||| |
|
|
| T |
2055233 |
cgtcgtcgtcatcatcagaagtagaaggccctgcatgatctatacacttctttaacaactgatcaccacacagatcttgattaccctcaaacgagtcatc |
2055332 |
T |
|
| Q |
491 |
tttgaatgtggaaaactgattattttgtggtataggacctgtgagattgttaaaggacacatttaagtactccaaaaaggtgatttctgccaactgttgg |
590 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||| | |
|
|
| T |
2055333 |
tttgaatgtagaaaactgattattttgtggtataggacctctgagattgttaaaggacacatttaagaactccaaaatggtgatttctgtcaactgttag |
2055432 |
T |
|
| Q |
591 |
ggaa |
594 |
Q |
| |
|
|||| |
|
|
| T |
2055433 |
ggaa |
2055436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 52 - 598
Target Start/End: Original strand, 2136868 - 2137426
Alignment:
| Q |
52 |
tcaaagcatgctctttcaaacaacctttattgcttttgcatacaaaggaaactctta--gaatgcaattacaagaacagaaggaaactaagacaaat--- |
146 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2136868 |
tcaaagcacgctctttcaaacaacctttattgcttttacatacataggaaactcttacagaatgcaattacaagaacagaaggaaactaaaacaaattag |
2136967 |
T |
|
| Q |
147 |
--------attgg----actaatatgtttattgctttggactcacatgacccttttaagctataacataaaaacaactcactaatgtctcttaaaaatct |
234 |
Q |
| |
|
|| || |||| ||||||||||| |||||||||||| |||||||||||| |||| |||| ||||||| ||||||||||||||||||| |
|
|
| T |
2136968 |
aaacataaatagggaggactagtatgtttattgttttggactcacaacacccttttaagccataaaataataacaactt--taatgtctcttaaaaatct |
2137065 |
T |
|
| Q |
235 |
tattaagaaataatgtaaatgaaacgccaaggtaatctctacaccattcaaatacctgcggaaagtaagtgtttcccaatgcaaatccagcaacaagtcc |
334 |
Q |
| |
|
||||||| || | | ||| |||||||| || || ||||||| ||||| ||||||||||| |||||||| ||||||||||||| | |||||||||||| || |
|
|
| T |
2137066 |
tattaaggaaaattataactgaaacgctaacgtgatctctataccatgcaaatacctgcagaaagtaactgtttcccaatgccactccagcaacaagacc |
2137165 |
T |
|
| Q |
335 |
accgccatatccaatcagaagaactgtccagtataattcaaagaaagattctgagttgtcatcatcaccatcagaagtagaaggccctgcatgatctata |
434 |
Q |
| |
|
|| ||||| ||||| || | | | |||| | | ||||||||||||| | |||| ||| ||| || ||| |||||||| | |||||||||| || |
|
|
| T |
2137166 |
tcctccatacccaataagcactattttccaatcaatttcaaagaaagatcccgagt---cattgtcattattagaggtagaaggtcttgcatgatcttta |
2137262 |
T |
|
| Q |
435 |
cacttcttcaacaactgatccccacacaaaccttggttaccctcaaatgaatcatctttgaatgtggaaaactgattattttgtggtataggacctgtga |
534 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2137263 |
cacttcttcaacagctgatccccacacaatccttggttaccctcaaatgaatcacttttgaatgtagaaaactgattattttgtggtataggacctgtga |
2137362 |
T |
|
| Q |
535 |
gattgttaaaggacacatttaagtactccaaaaaggtgatttctgccaactgttggggaatttt |
598 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2137363 |
gattgttaaaggacacatttaagaacgccaaaaaggtgatttctgccaactgttggggaatttt |
2137426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 278 - 598
Target Start/End: Original strand, 2064413 - 2064730
Alignment:
| Q |
278 |
ccattcaaatacctgcggaaagtaagtgtttcccaatgcaaatccagcaacaagtccaccgccatatccaatcagaagaactgtccagtataattcaaag |
377 |
Q |
| |
|
|||||||||||||| |||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2064413 |
ccattcaaatacctctggaaagaaagtgcttcccaatgaaactccagcaacaagtccaccgccatatccaatcagaacaactgtccagtataattcaaag |
2064512 |
T |
|
| Q |
378 |
aaagattctgagttgtcatcatcaccatcagaagtagaaggccctgcatgatctatacacttcttcaacaactgatccccacacaaaccttggttaccct |
477 |
Q |
| |
|
||||| ||||||| |||||||||| || || |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||| |
|
|
| T |
2064513 |
aaagactctgagtcgtcatcatca---tcggaggtagaaggccctgcatgatctatacacttctttaacaactgatccccacacagaccttgattaccct |
2064609 |
T |
|
| Q |
478 |
caaatgaatcatctttgaatgtggaaaactgattattttgtggtataggacctgtgagattgttaaaggacacatttaagtactccaaaaaggtgatttc |
577 |
Q |
| |
|
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
2064610 |
caaatgaatcacctttgaatgtagaaaactgattattttgtggtataggacctgtgagattgttaaatgacacatttaagaactccaaaaaggtgatttc |
2064709 |
T |
|
| Q |
578 |
tgccaactgttggggaatttt |
598 |
Q |
| |
|
||||||||||| |||||||| |
|
|
| T |
2064710 |
agccaactgttgaggaatttt |
2064730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 393 - 598
Target Start/End: Original strand, 2134104 - 2134309
Alignment:
| Q |
393 |
tcatcatcaccatcagaagtagaaggccctgcatgatctatacacttcttcaacaactgatccccacacaaaccttggttaccctcaaatgaatcatctt |
492 |
Q |
| |
|
|||||||| ||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||| |
|
|
| T |
2134104 |
tcatcatcgtcatcagaggtagaaggacctccatgatctatacacttcttcaacaactgatccccacacagaccttgattaccctcaaatgaatcacctt |
2134203 |
T |
|
| Q |
493 |
tgaatgtggaaaactgattattttgtggtataggacctgtgagattgttaaaggacacatttaagtactccaaaaaggtgatttctgccaactgttgggg |
592 |
Q |
| |
|
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||| |||| ||||||||||||||| |
|
|
| T |
2134204 |
tgaacgtagaaaactgattattttgtggtataggacctgtgagattgttaaaggacaaatttaagaactgcaaaaaggtaatttgtgccaactgttgggg |
2134303 |
T |
|
| Q |
593 |
aatttt |
598 |
Q |
| |
|
|||||| |
|
|
| T |
2134304 |
aatttt |
2134309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 275 - 459
Target Start/End: Original strand, 2121227 - 2121411
Alignment:
| Q |
275 |
acaccattcaaatacctgcggaaagtaagtgtttcccaatgcaaatccagcaacaagtccaccgccatatccaatcagaagaactgtccagtataattca |
374 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
2121227 |
acaccatgcaaatacctgcagaaagtaagtgtttcccaatgccactccagcaacaagtccaccgccatatccaatcagaactactgtccagtataattca |
2121326 |
T |
|
| Q |
375 |
aagaaagattctgagttgtcatcatcaccatcagaagtagaaggccctgcatgatctatacacttcttcaacaactgatccccac |
459 |
Q |
| |
|
| |||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| |
|
|
| T |
2121327 |
atgaaagattttgagtcgtcatcatcatcatcagaagtagaaggccctgcaggatctatacacttctttaacagctgatccccac |
2121411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 490 - 598
Target Start/End: Original strand, 2121412 - 2121520
Alignment:
| Q |
490 |
ctttgaatgtggaaaactgattattttgtggtataggacctgtgagattgttaaaggacacatttaagtactccaaaaaggtgatttctgccaactgttg |
589 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
2121412 |
ctttgaatgtagaaaactgattattttgtggtataggacctgtaagattgttaaatgacacatttaagtattccaaaaaggtgatttgtgccaactgttg |
2121511 |
T |
|
| Q |
590 |
gggaatttt |
598 |
Q |
| |
|
||||||||| |
|
|
| T |
2121512 |
gggaatttt |
2121520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 2071306 - 2071404
Alignment:
| Q |
49 |
aattcaaagcatgctctttcaaacaacctttattgcttttgcatacaaaggaaactcttagaatgcaattacaagaacagaaggaaactaagacaaata |
147 |
Q |
| |
|
||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
2071306 |
aattcaaagcacgctctatcgaacaacctttattgcttttacatacaaaggaaactcttaatatgcaattacaagaacagaaggaaactaaaacaaata |
2071404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 428 - 571
Target Start/End: Complemental strand, 1698259 - 1698116
Alignment:
| Q |
428 |
atctatacacttcttcaacaactgatccccacacaaaccttggttaccctcaaatgaatcatctttgaatgtggaaaactgattattttgtggtatagga |
527 |
Q |
| |
|
|||||| ||||||||| ||| |||||||||||||| |||||||| || |||||||||| ||||| ||||| || ||||| | ||| || ||||||||| |
|
|
| T |
1698259 |
atctatgcacttcttcgacagttgatccccacacaagccttggttgccttcaaatgaattatcttgaaatgtagagaactgctgattctgcggtatagga |
1698160 |
T |
|
| Q |
528 |
cctgtgagattgttaaaggacacatttaagtactccaaaaaggt |
571 |
Q |
| |
|
|||| ||||||||| ||||||||||| | | ||||||||||||| |
|
|
| T |
1698159 |
cctgagagattgttgaaggacacattaaggaactccaaaaaggt |
1698116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 2054890 - 2055012
Alignment:
| Q |
26 |
acctcactgaaatatcaaaatgtaattcaaagcatgctctttcaaacaacctttattgcttttgcatacaaaggaaactcttaga--atgcaattacaag |
123 |
Q |
| |
|
|||||| |||| || ||||||||||||||| ||| |||||||||||||| ||||||||||||| || | |||||||||||||| | ||||||||||||| |
|
|
| T |
2054890 |
acctcaatgaattaccaaaatgtaattcaatgcacgctctttcaaacaa-ctttattgcttttacacagaaaggaaactcttacaatatgcaattacaag |
2054988 |
T |
|
| Q |
124 |
aacagaaggaaactaagacaaata |
147 |
Q |
| |
|
|||||||| ||||| | ||||||| |
|
|
| T |
2054989 |
aacagaagaaaactgaaacaaata |
2055012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 210 - 281
Target Start/End: Original strand, 2120519 - 2120590
Alignment:
| Q |
210 |
actcactaatgtctcttaaaaatcttattaagaaataatgtaaatgaaacgccaaggtaatctctacaccat |
281 |
Q |
| |
|
||||||| |||||||||||||||||||||||| || | | ||| |||||||||||||||||||||| ||||| |
|
|
| T |
2120519 |
actcacttatgtctcttaaaaatcttattaagcaaaattataactgaaacgccaaggtaatctctataccat |
2120590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 2119412 - 2119459
Alignment:
| Q |
19 |
agattaaacctcactgaaatatcaaaatgtaattcaaagcatgctctt |
66 |
Q |
| |
|
||||||||||||| ||||||| |||||| |||||||||| |||||||| |
|
|
| T |
2119412 |
agattaaacctcattgaaataccaaaatataattcaaagaatgctctt |
2119459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 390
Target Start/End: Complemental strand, 1698404 - 1698315
Alignment:
| Q |
301 |
aagtgtttcccaatgcaaatccagcaacaagtccaccgccatatccaatcagaagaactgtccagtataattcaaagaaagattctgagt |
390 |
Q |
| |
|
||||| |||||||||| | ||| |||||||| ||||| |||| ||||||||| ||| |||||| |||||||| ||||||||||||| |
|
|
| T |
1698404 |
aagtgattcccaatgccactcctgcaacaagaccacctacatacccaatcagacttactttccagtcaaattcaaacaaagattctgagt |
1698315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 2054201 - 2054237
Alignment:
| Q |
111 |
atgcaattacaagaacagaaggaaactaagacaaata |
147 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
2054201 |
atgcaattacaagaacaaaaggaaactaaaacaaata |
2054237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 14806103 - 14806139
Alignment:
| Q |
203 |
aaaaacaactcactaatgtctcttaaaaatcttatta |
239 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
14806103 |
aaaaacaactcactaatgtctcataaaaaacttatta |
14806139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 15253097 - 15253133
Alignment:
| Q |
203 |
aaaaacaactcactaatgtctcttaaaaatcttatta |
239 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
15253097 |
aaaaacaactcactaatgtctcataaaaaacttatta |
15253133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 240
Target Start/End: Complemental strand, 17532610 - 17532573
Alignment:
| Q |
203 |
aaaaacaactcactaatgtctcttaaaaatcttattaa |
240 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
17532610 |
aaaaacaactcactaatgtctcataaaaaacttattaa |
17532573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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