View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7802_high_27 (Length: 308)
Name: NF7802_high_27
Description: NF7802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7802_high_27 |
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Alignment Details
Target: chr5 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 19 - 292
Target Start/End: Original strand, 4969535 - 4969808
Alignment:
| Q |
19 |
gtacaaatgaaaattaaaacgcgaaatcagataacaaagattagaaatggacctcaatgaagaaaaatgagatgaacaaacgtgataagtaaaaatggtc |
118 |
Q |
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| T |
4969535 |
gtacagatgaaaattaaaacgcgaaattagataacaaagattataaatggacctcaatgaagaaaaatgagatgaacaaacgtgatcagtaaaaatggtc |
4969634 |
T |
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| Q |
119 |
aagtaaacaagtttcacttattgtaatcggggcattctttaaggcaacactcgtaaatgattttggtgcactaaaagaataacacatgacaagtgactat |
218 |
Q |
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| T |
4969635 |
aagtaaacaagtttcatttattgtaatcggggcattcttcaaggcaacactcgtaaatgattttggtgcactaaaagaataacacatgacaagtgactat |
4969734 |
T |
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| Q |
219 |
actaccatcaaataaagatttaatagccacatacatgcaattgagctcaaacgtaacattaacgtacgacttca |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
4969735 |
actaccatcaaataaagatttaatagccacatacatgcaattgagctcaaacgtaacattaacgtacgccttca |
4969808 |
T |
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